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Conserved domains on  [gi|1896070319|gb|QNJ47315|]
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NADH dehydrogenase subunit 4L, partial (mitochondrion) [Prosarthria teretrirostris]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-91 1.27e-19

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 75.58  E-value: 1.27e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 12 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNS 91
Cdd:MTH00162  10 MFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-91 1.27e-19

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 75.58  E-value: 1.27e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 12 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNS 91
Cdd:MTH00162  10 MFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
12-94 4.30e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 36.00  E-value: 4.30e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 12 IYLVGVYVFSSsRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYEL--FFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFL 89
Cdd:pfam00420  9 LFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*
gi 1896070319 90 NSLSV 94
Cdd:pfam00420 88 DSLNL 92
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 12-91 1.27e-19

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 75.58  E-value: 1.27e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 12 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNS 91
Cdd:MTH00162  10 MFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 1-97 6.78e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 53.82  E-value: 6.78e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319  1 MYLFPFFLFLFIYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSM 80
Cdd:MTH00188   1 MFFSMILVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSLVLLTFAACEASVGLALLVSL 80

                         90
                 ....*....|....*..
gi 1896070319 81 VRSHGNDFLNSLSVSLC 97
Cdd:MTH00188  81 IRSHGSDYVSSLNLIKC 97
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 20-97 5.65e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 51.39  E-value: 5.65e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 20 FSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFL--IIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSLSVSLC 97
Cdd:MTH00125  19 LSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPmpIILLTFSACEAGTGLALLVATTRTHGSDHLKNLNLLQC 98
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 14-97 1.32e-09

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 50.52  E-value: 1.32e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 14 LVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYL-VMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSL 92
Cdd:MTH00013  13 FISMFNLSLQRKHLLMSLLSLEAMILSLALFIPLSLmFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLKSL 92


                 ....*
gi 1896070319 93 SVSLC 97
Cdd:MTH00013  93 TSNKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 12-97 5.74e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 48.69  E-value: 5.74e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 12 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNS 91
Cdd:MTH00149  12 GFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMFSSSGLISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDYVSS 91


                 ....*.
gi 1896070319 92 LSVSLC 97
Cdd:MTH00149  92 LSSLKF 97
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 24-97 4.16e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 46.50  E-value: 4.16e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896070319 24 RKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFL--IIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSLSVSLC 97
Cdd:MTH00126  23 RTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAapMLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 24-97 1.70e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 44.98  E-value: 1.70e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1896070319 24 RKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFL--IIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSLSVSLC 97
Cdd:MTH00067  23 RTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSlpMFMLTFSACEASTGLALMVATTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 12-97 1.99e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 39.53  E-value: 1.99e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 12 IYLVGVYVFsssRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELFFL--IIFLVLSVCEGALGLSVLVSMVRSHGNDFL 89
Cdd:MTH00107  14 ISLLGLLMY---RSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMmpIILLVFAACEAAVGLALLVMVSNTYGTDYV 90


                 ....*...
gi 1896070319 90 NSLSVSLC 97
Cdd:MTH00107  91 QNLNLLQC 98
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 24-93 1.67e-04

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 37.21  E-value: 1.67e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1896070319 24 RKHLLMSLLSLEYIVISLYGLLSIYLVMYDYELF--FLIIFLVLSVCEGALGLSVLVSMVRSHGNDFLNSLS 93
Cdd:MTH00043  23 RLHLLSILLCLELLLISLFLNISIWSLNYGNFSNlsFSLLLLTLSACEASIGLSLMVLLSRNHNSDLVASLN 94
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
12-94 4.30e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 36.00  E-value: 4.30e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 12 IYLVGVYVFSSsRKHLLMSLLSLEYIVISLYGLLSIYLVMYDYEL--FFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFL 89
Cdd:pfam00420  9 LFLIGLYGLLL-RRNLLRVLLSLELMLNAVNLALVLFGRLTADPLpqALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*
gi 1896070319 90 NSLSV 94
Cdd:pfam00420 88 DSLNL 92
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 12-93 4.63e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 36.08  E-value: 4.63e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1896070319 12 IYLVGVYVFSSSRKHLLMSLLSLEYIVISLYGLLSIYLVMYDY--ELFFLIIFLVLSVCEGALGLSVLVSMVRSHGNDFL 89
Cdd:MTH00181   8 AFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSssMLMFGLILLTFSACEAVLGLSLLVATNRTHGSDHL 87


                 ....
gi 1896070319 90 NSLS 93
Cdd:MTH00181  88 LKFN 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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