NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1896070327|gb|QNJ47319|]
View 

NADH dehydrogenase subunit 4L, partial (mitochondrion) [Systella rafflesii]

Protein Classification

NADH dehydrogenase subunit 4L( domain architecture ID 10009597)

NADH dehydrogenase subunit 4L is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-46 1.04e-08

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177218  Cd Length: 89  Bit Score: 45.92  E-value: 1.04e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 1896070327  1 IMNLFCYNCDYFFSIIFLVVSVCEGALGLSILVSMIRSHGNDFLNS 46
Cdd:MTH00162  44 FLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-46 1.04e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 45.92  E-value: 1.04e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 1896070327  1 IMNLFCYNCDYFFSIIFLVVSVCEGALGLSILVSMIRSHGNDFLNS 46
Cdd:MTH00162  44 FLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
13-52 3.58e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 34.46  E-value: 3.58e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 1896070327 13 FSIIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLLLC 52
Cdd:pfam00420 56 LILTAIVIAAAEAAVGLALLVRIYRTHGTDDVDSLNLLKG 95
 
Name Accession Description Interval E-value
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 1-46 1.04e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 45.92  E-value: 1.04e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 1896070327  1 IMNLFCYNCDYFFSIIFLVVSVCEGALGLSILVSMIRSHGNDFLNS 46
Cdd:MTH00162  44 FLYLSFFNYELYFLLFFLTFSVCEGALGLSILVSMIRSHGNDYFSS 89
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 15-52 1.55e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 43.30  E-value: 1.55e-07
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 1896070327 15 IIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLLLC 52
Cdd:MTH00125  61 IILLTFSACEAGTGLALLVATTRTHGSDHLKNLNLLQC 98
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 10-52 3.91e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 39.57  E-value: 3.91e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 1896070327 10 DYFFSIIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLLLC 52
Cdd:MTH00188  55 ELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSSLNLIKC 97
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 15-52 2.40e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 37.64  E-value: 2.40e-05
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 1896070327 15 IIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLLLC 52
Cdd:MTH00126  61 MLLLAFSACEASAGLALLVATARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 15-52 2.80e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 37.66  E-value: 2.80e-05
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 1896070327 15 IIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLLLC 52
Cdd:MTH00067  61 MFMLTFSACEASTGLALMVATTRTHGTDHLKNLNLLQC 98
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 7-52 1.65e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 35.59  E-value: 1.65e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 1896070327  7 YNCDYFFSIIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLLLC 52
Cdd:MTH00149  52 ISFSSYLFLIILTFGACEASLGLSLLVSLIRLHGNDYVSSLSSLKF 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
13-52 3.58e-04

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 34.46  E-value: 3.58e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 1896070327 13 FSIIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLLLC 52
Cdd:pfam00420 56 LILTAIVIAAAEAAVGLALLVRIYRTHGTDDVDSLNLLKG 95
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 12-52 3.77e-04

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 34.73  E-value: 3.77e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 1896070327 12 FFSIIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLLLC 52
Cdd:MTH00013  57 MLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLKSLTSNKC 97
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 15-52 5.18e-04

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 34.14  E-value: 5.18e-04
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 1896070327 15 IIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLLLC 52
Cdd:MTH00107  61 IILLVFAACEAAVGLALLVMVSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 12-50 1.94e-03

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 32.61  E-value: 1.94e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 1896070327 12 FFSIIFLVVSVCEGALGLSILVSMIRSHGNDFLNSFGLL 50
Cdd:MTH00181  55 MFGLILLTFSACEAVLGLSLLVATNRTHGSDHLLKFNLL 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH