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Conserved domains on  [gi|1910803949|gb|QOD97210|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Cariama cristata]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009570)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 3-325 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214422  Cd Length: 323  Bit Score: 600.34  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   3 QPTPLTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTP 82
Cdd:MTH00111    1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  83 MLALILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVV 162
Cdd:MTH00111   81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 163 LSGSYTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMN 242
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 243 ALTTILFLNPNSLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLP 322
Cdd:MTH00111  241 TLTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                  ...
gi 1910803949 323 PYM 325
Cdd:MTH00111  321 PQL 323
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 3-325 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 600.34  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   3 QPTPLTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTP 82
Cdd:MTH00111    1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  83 MLALILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVV 162
Cdd:MTH00111   81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 163 LSGSYTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMN 242
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 243 ALTTILFLNPNSLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLP 322
Cdd:MTH00111  241 TLTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                  ...
gi 1910803949 323 PYM 325
Cdd:MTH00111  321 PQL 323
NADHdh pfam00146
NADH dehydrogenase;
14-310 7.74e-115

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 334.06  E-value: 7.74e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  14 LSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILAITIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  94 --IPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTLNT 171
Cdd:pfam00146  83 avIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 172 LATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILFL- 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLg 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 251 NPNSLNLSPELFSTVLatKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLW 310
Cdd:pfam00146 243 GWLGPFPLPGLLWFLL--KVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 18-306 1.10e-103

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 306.67  E-value: 1.10e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  18 IPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILAITIWIPLP 97
Cdd:COG1005    20 VFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIP 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  98 L--PFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTLNTLATT 175
Cdd:COG1005   100 FgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEA 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 176 QE-PLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILFLNPNS 254
Cdd:COG1005   180 QAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWL 259

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1910803949 255 LNLSPELFSTV-----LATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 306
Cdd:COG1005   260 GPFPILPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 3-325 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 600.34  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   3 QPTPLTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTP 82
Cdd:MTH00111    1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  83 MLALILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVV 162
Cdd:MTH00111   81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 163 LSGSYTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMN 242
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 243 ALTTILFLNPNSLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLP 322
Cdd:MTH00111  241 TLTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                  ...
gi 1910803949 323 PYM 325
Cdd:MTH00111  321 PQL 323
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 5-325 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 507.99  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   5 TPLTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPML 84
Cdd:MTH00134    4 TLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPML 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  85 ALILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLS 164
Cdd:MTH00134   84 ALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFT 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 165 GSYTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNAL 244
Cdd:MTH00134  164 GGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTL 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 245 TTILFLNPNSLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLPPY 324
Cdd:MTH00134  244 SAILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQ 323


                  .
gi 1910803949 325 M 325
Cdd:MTH00134  324 L 324
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 14-325 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 504.93  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  14 LSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILAITIW 93
Cdd:MTH00104    7 LLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMW 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  94 IPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTLNTLA 173
Cdd:MTH00104   87 IPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLI 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 174 TTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILFLNPN 253
Cdd:MTH00104  167 TTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAF 246

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1910803949 254 SLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLPPYM 325
Cdd:MTH00104  247 HNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-323 1.40e-179

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 499.15  E-value: 1.40e-179
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   5 TPLTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPML 84
Cdd:MTH00071    3 TLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTM 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  85 ALILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLS 164
Cdd:MTH00071   83 ALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 165 GSYTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNAL 244
Cdd:MTH00071  163 GGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTL 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1910803949 245 TTILFLNPNSLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLPP 323
Cdd:MTH00071  243 STILFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPP 321
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 7-323 2.55e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 417.00  E-value: 2.55e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   7 LTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLAL 86
Cdd:MTH00218    2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  87 ILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGS 166
Cdd:MTH00218   82 TLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGG 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 167 YTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTT 246
Cdd:MTH00218  162 FSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSV 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1910803949 247 ILFLNPNSLNLSpelfstvLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLPP 323
Cdd:MTH00218  242 ILFLGTSLTTIN-------LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 5-323 2.88e-142

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 404.74  E-value: 2.88e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   5 TPLTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPML 84
Cdd:MTH00040    2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  85 ALILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLS 164
Cdd:MTH00040   82 FLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 165 GSYTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNAL 244
Cdd:MTH00040  162 GSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 245 TTILFLNPNS-LNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLPP 323
Cdd:MTH00040  242 SVILFLGGGSpFNEIFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
NADHdh pfam00146
NADH dehydrogenase;
14-310 7.74e-115

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 334.06  E-value: 7.74e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  14 LSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILAITIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  94 --IPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTLNT 171
Cdd:pfam00146  83 avIPFGPGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 172 LATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILFL- 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLg 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 251 NPNSLNLSPELFSTVLatKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLW 310
Cdd:pfam00146 243 GWLGPFPLPGLLWFLL--KVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 10-320 3.66e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 332.86  E-value: 3.66e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  10 LTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILA 89
Cdd:MTH00195    5 VIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  90 ITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTL 169
Cdd:MTH00195   85 LILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 170 NTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILF 249
Cdd:MTH00195  165 TIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILF 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1910803949 250 LNPNSlnlspelfSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAG 320
Cdd:MTH00195  245 LGGGG--------TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 18-316 9.85e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 331.35  E-value: 9.85e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  18 IPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILAITIWIPLP 97
Cdd:MTH00193   13 ICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYP 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  98 LPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTLNTLATTQE 177
Cdd:MTH00193   93 YLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQK 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 178 PLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILFLNPNSLNL 257
Cdd:MTH00193  173 YIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSL 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1910803949 258 SPELfstvlatKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPI 316
Cdd:MTH00193  253 LFYL-------KLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-307 2.51e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 330.68  E-value: 2.51e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   7 LTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLAL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  87 ILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGS 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 167 YTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTT 246
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1910803949 247 ILFLnpNSLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLAL 307
Cdd:MTH00143  241 VLFF--GGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSI 299
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 14-324 1.68e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 313.97  E-value: 1.68e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  14 LSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILAITIW 93
Cdd:MTH00054    9 LAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAW 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  94 --IPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTLNT 171
Cdd:MTH00054   89 gvIPYGEGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTE 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 172 LATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILFLN 251
Cdd:MTH00054  169 IVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLG 248

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1910803949 252 ---PNSLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLPPY 324
Cdd:MTH00054  249 gwlVISGPTSYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPPF 324
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 7-314 1.04e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 311.20  E-value: 1.04e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   7 LTLLTMSLSYaIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLAL 86
Cdd:MTH00225    2 SFLLKFLIML-ICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  87 ILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGS 166
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 167 YTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTT 246
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1910803949 247 ILFLnPNSLNLSPELFstvlATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSL 314
Cdd:MTH00225  241 ILFF-GGFFVTIDLFL----ILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 9-323 5.97e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 310.13  E-value: 5.97e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   9 LLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALIL 88
Cdd:MTH00216    8 YLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  89 AITIWIPLPLP--FPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGS 166
Cdd:MTH00216   88 ALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGS 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 167 YTLNTLATTQEP-LYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALT 245
Cdd:MTH00216  168 LSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLT 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 246 TILFLNpNSLNLSPELF--STVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSLPISYAGLPP 323
Cdd:MTH00216  248 TILFLG-GWLSPIKYFKggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 18-306 1.10e-103

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 306.67  E-value: 1.10e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  18 IPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILAITIWIPLP 97
Cdd:COG1005    20 VFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIP 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  98 L--PFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTLNTLATT 175
Cdd:COG1005   100 FgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEA 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 176 QE-PLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILFLNPNS 254
Cdd:COG1005   180 QAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWL 259

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1910803949 255 LNLSPELFSTV-----LATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLA 306
Cdd:COG1005   260 GPFPILPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-310 1.39e-99

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 295.95  E-value: 1.39e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   1 MTQPTPLTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTT 80
Cdd:PRK06076    4 FGPDLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  81 TPMLALILAITIWIPLPL--PFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILL 158
Cdd:PRK06076   84 APVIAFIPAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLL 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 159 SMVVLSGSYTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANI 238
Cdd:PRK06076  164 AVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINM 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1910803949 239 MLMNALTTILFLN-----PNSLNLSPELFSTVLatKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLW 310
Cdd:PRK06076  244 ILVSALITTLFLGgwlppFPLGGGIPGAIWFVL--KVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-323 1.82e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 263.42  E-value: 1.82e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   1 MTQPTPLTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTT 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  81 TPMLALILAITIW--IPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILL 158
Cdd:MTH00029   81 APIISFTLAILAWaiVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 159 SMVVLSGSYTLNTLATTQEPLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANI 238
Cdd:MTH00029  161 SVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 239 MLMNALTTILFLNP--NSLNLSPELFSTVLATKVLLLSSG--------------FLWIRASYPRFRYDQLMHLLWKNFLP 302
Cdd:MTH00029  241 ILMSCMMTIFFLGGwlSPLDGIPTPPEAFSIFEQIASSKSsfwfftkssifilfFIWSRASFPRIRYDQLMKLLWKTYLP 320

                         330       340
                  ....*....|....*....|.
gi 1910803949 303 LTLALCLWHTSLPISYAGLPP 323
Cdd:MTH00029  321 LSLGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 12-309 5.72e-83

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 253.55  E-value: 5.72e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  12 MSLSYAIPILI-------AVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPML 84
Cdd:MTH00010    1 MNISFFISILLsyvmallAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  85 ALILAITIWIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLS 164
Cdd:MTH00010   81 SLILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 165 GSYTLNTLATTQEPLYLIFSSwPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNAL 244
Cdd:MTH00010  161 QTFSFSKIIMSQYSWILLMII-PLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLF 239

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1910803949 245 TTILFLnpnSLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCL 309
Cdd:MTH00010  240 TSVFFT---SFIPSIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM 301
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 18-305 2.17e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 202.44  E-value: 2.17e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  18 IPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILAITIWIPLP 97
Cdd:MTH00090    7 IFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLP 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  98 LPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTLNTlattqe 177
Cdd:MTH00090   87 YFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS------ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 178 plYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILFLNPNSLNL 257
Cdd:MTH00090  161 --SFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSFLML 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1910803949 258 spelfstvlatkvLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTL 305
Cdd:MTH00090  239 -------------FLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ndhA CHL00032
NADH dehydrogenase subunit 1
 14-314 8.54e-50

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 169.36  E-value: 8.54e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  14 LSYAIPILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALI---LAI 90
Cdd:CHL00032   34 LTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVIsilLSY 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  91 TIwIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSytLN 170
Cdd:CHL00032  114 LV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNS--LS 190

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 171 TLATTQEPLYLIFSSWPL------TMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNAL 244
Cdd:CHL00032  191 TVDIVEAQSKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLF 270

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 245 TTILFL-------------NPNSLNLSPELFSTVLATKVLLLSSG-FLWI----RASYPRFRYDQLMHLLWKNFLPLTLA 306
Cdd:CHL00032  271 VTVLYLggwnlsipyifipELFEINKTGGVFGTTIGIFITLAKTYlFLFIsittRWTLPRLRMDQLLNLGWKFLLPISLG 350


                  ....*...
gi 1910803949 307 LCLWHTSL 314
Cdd:CHL00032  351 NLLLTTSF 358
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 20-305 3.07e-46

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 158.16  E-value: 3.07e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  20 ILIAVAFLTLVERKVLSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLYTTTPMLALILAITIWIPLPLP 99
Cdd:MTH00058   14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 100 FPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLSGSYTLNTLATTQEPL 179
Cdd:MTH00058   94 YSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLS 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 180 YLIFssWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNALTTILFLNPNslnlsp 259
Cdd:MTH00058  174 VLLF--PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGG------ 245

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1910803949 260 eLFSTVLATKVLLlssgFLWIRASYPRFRYDQLMHLLWKNFLPLTL 305
Cdd:MTH00058  246 -FVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLI 286
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-310 5.71e-32

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 121.06  E-value: 5.71e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949   7 LTLLTMSLSYAIPILIAVAFLTLVERKVLSYMQARKGPnivgpfGLLQPIADGVKLFIKEPIRPSTSSpFLYTTTPMLAL 86
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949  87 ILAITI--WIPLPLPFPLTDLNLGLLFLLAMSSMAVYSILWSGWASNSKYALIGALRAIAQTISYEVTLALILLSMVVLS 164
Cdd:COG0650    74 AAMLLAalLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1910803949 165 GSYTLNTLATTQE---PLYLIFSSWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLM 241
Cdd:COG0650   154 GSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1910803949 242 NALTTILFLnPNSLNLSPELFSTVLATKVLLLSSGFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLW 310
Cdd:COG0650   234 LSLFVNLFL-PWGIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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