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Conserved domains on  [gi|1916858775|gb|QOL00547|]
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ATP synthase F0 subunit 6 (mitochondrion) [Ceracris nigricornis nigricornis]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-221 1.44e-97

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 283.21  E-value: 1.44e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   1 MMTNLFSTFDPSTNiFNLSLNWTSTFIGLLLIPSLFWLTPSRINILWNKMNLTLHNEFKTLLGPKsFNGTTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  81 MMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLA- 159
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAv 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916858775 160 ---ANMIAGHLLLTLLGNTGPSMTMNLISMLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 221
Cdd:MTH00157  159 rlaANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-221 1.44e-97

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 283.21  E-value: 1.44e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   1 MMTNLFSTFDPSTNiFNLSLNWTSTFIGLLLIPSLFWLTPSRINILWNKMNLTLHNEFKTLLGPKsFNGTTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  81 MMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLA- 159
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAv 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916858775 160 ---ANMIAGHLLLTLLGNTGPSMTMNLISMLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 221
Cdd:MTH00157  159 rlaANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-221 5.59e-42

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 141.57  E-value: 5.59e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   5 LFSTFDPST-NIFNLSLNWTSTFIGLLLIPSLF----WLTPSRINILWNKMNLTLHNEFKTLLGPKSFNGTTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  80 MMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGT-- 157
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISls 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916858775 158 --LAANMIAGHLLLTLLGNTGPSMTMNLISML-IIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 221
Cdd:TIGR01131 160 vrLFANISAGHLLLTLLSGLLFSLMSSAIFALlLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-218 3.99e-36

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 124.43  E-value: 3.99e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  73 IFISIFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNI 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775 153 IRPGTLA----ANMIAGHLLLTLLGNTGPSMTMNLISMLIIGQMLLLILESAVAMIQAYVFSILSTLYSS 218
Cdd:cd00310    87 IRPLSLSvrlfANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
22-218 1.68e-20

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 85.62  E-value: 1.68e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  22 WTSTFIGLLLIPSLFWLT----PSRINILWNKMNLTLHNEFKTLLGPKSFNGTTFIFISIFIMMMFNNFLGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRKTkklvPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  95 TSTSHLVFTFTIALPMWLSFMMFGWLNH-TNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLA----ANMIAGHLLL 169
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSlrlfGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1916858775 170 TLLGNTGPSMTMNLISMLII---GQMLLLILESAVAMIQAYVFSILSTLYSS 218
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-216 4.02e-16

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 73.57  E-value: 4.02e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  76 SIFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNH-TNHMFAHLVPQGTPPaLMSFMVLIETISNIIR 154
Cdd:COG0356    63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELAR 141

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858775 155 PGTLA----ANMIAGHLLLTLLGNTGPSMTMNLISmlIIGQMLLLILESAVAMIQAYVFSILSTLY 216
Cdd:COG0356   142 PLSLSlrlfGNMFAGHIILLLLAGLAPFLLLGVLS--LLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-221 1.44e-97

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 283.21  E-value: 1.44e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   1 MMTNLFSTFDPSTNiFNLSLNWTSTFIGLLLIPSLFWLTPSRINILWNKMNLTLHNEFKTLLGPKsFNGTTFIFISIFIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  81 MMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLA- 159
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAv 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916858775 160 ---ANMIAGHLLLTLLGNTGPSMTMNLISMLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 221
Cdd:MTH00157  159 rlaANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-221 2.09e-48

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 158.27  E-value: 2.09e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   1 MMTNLFSTFDP-STNIFN-LSLNWTSTFIGLLLIPSLFWLTPSRINILWNKMNlTLHNEFKTLLGPKSFNGTTFIFISIF 78
Cdd:MTH00176    1 MLVDLFSSFDPpNKNIFSmISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFS-TFLPEMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  79 IMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775 159 ----AANMIAGHLLLTLLGNTGPSMTMNLI---SMLIIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 221
Cdd:MTH00176  160 avrlAANLSAGHLLLGLLGAAMWGLLPVSPligFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-221 5.59e-42

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 141.57  E-value: 5.59e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   5 LFSTFDPST-NIFNLSLNWTSTFIGLLLIPSLF----WLTPSRINILWNKMNLTLHNEFKTLLGPKSFNGTTFIFiSIFI 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  80 MMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGT-- 157
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISls 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916858775 158 --LAANMIAGHLLLTLLGNTGPSMTMNLISML-IIGQMLLLILESAVAMIQAYVFSILSTLYSSEVY 221
Cdd:TIGR01131 160 vrLFANISAGHLLLTLLSGLLFSLMSSAIFALlLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-219 1.34e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 133.32  E-value: 1.34e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   1 MMTNLFSTFDPSTNIFNLSLN----WTSTFIGLLLIPSLFWLTPSRINILWNKMNLTLHNEFKTLLGpKSFNGTTFIFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  77 IFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPG 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775 157 T----LAANMIAGHLLLTLLGNTGPSMTMNLIS---MLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 219
Cdd:MTH00005  160 TlsfrLAANMSAGHIVLSLIGIYAASALFSSISstiLLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 73-218 3.99e-36

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 124.43  E-value: 3.99e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  73 IFISIFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNI 152
Cdd:cd00310     7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775 153 IRPGTLA----ANMIAGHLLLTLLGNTGPSMTMNLISMLIIGQMLLLILESAVAMIQAYVFSILSTLYSS 218
Cdd:cd00310    87 IRPLSLSvrlfANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-219 2.82e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 119.59  E-value: 2.82e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   1 MMTNLFSTFDPSTNIFNL--SLNWTSTFIGLLLIPSLFWLTPSRINILWNKMNLTLHNEFKTLLGpKSFNGTTFIFISIF 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  79 IMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916858775 159 ----AANMIAGHLLLTLLGNTGPSMTMNLISM----LIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 219
Cdd:MTH00173  160 tvrlLANISAGHIVLTLIGNYLSSSLFSSSVVslllVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-219 4.53e-33

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 118.92  E-value: 4.53e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   3 TNLFSTFDPSTnIFNLSLNWTSTFIGL---LLIPSLFWLtPSRINILWNKMNLTLHNEFKTLLGPKSFNGTTFIFiSIFI 79
Cdd:MTH00035    5 NSIFGQFSPDT-ILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLT-TVFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  80 MMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGT-- 157
Cdd:MTH00035   82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIAlg 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858775 158 --LAANMIAGHLLLTLLGNTGPSMTMNLI--SMLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 219
Cdd:MTH00035  162 lrLAANLTAGHLLIFLLSTAIWELSNSPLisIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-219 1.25e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 109.91  E-value: 1.25e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   1 MMTNLFSTFDPSTNIFnlslnwTSTFIGLLLIPSLFWLTPS---RINILWNKMNLTLHNEFKTLLGPKSFNGT--TFIFI 75
Cdd:MTH00120    1 MNLNFFDQFSSPELLG------IPLILLAMLIPALLIPSPKnrlLTNRLTTLQLWLIKLITKQLMLPLNKKGHkwALILT 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  76 SIFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRP 155
Cdd:MTH00120   75 SLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRP 154

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916858775 156 GTLA----ANMIAGHLLLTLLGNTGPSM--TMNLISMLIIGQMLLL-ILESAVAMIQAYVFSILSTLYSSE 219
Cdd:MTH00120  155 LALGvrltANLTAGHLLIQLISTATLNLlpTMPTLSLLTLIILLLLtILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-219 1.36e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 106.96  E-value: 1.36e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   1 MMTNLFSTFDpSTNIFNLSLNWTSTFIGLLLIPSLF--WLTPSRINILWNKMNlTLHNEFKTLLGPKSFNGTtFIFISIF 78
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLTnrWLNNRLSTLQSWFFG-SFTFQLMQPINKKGHKWA-VLFLSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  79 IMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTL 158
Cdd:MTH00179   78 LFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1916858775 159 A----ANMIAGHLLLTLLGNTGPSM--TMNLISMLI-IGQMLLLILESAVAMIQAYVFSILSTLYSSE 219
Cdd:MTH00179  158 GvrltANITAGHLLMHLISSAVFVLmnFMGMVALLTlLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 73-219 8.51e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 99.95  E-value: 8.51e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  73 IFISIFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNI 152
Cdd:MTH00132   72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916858775 153 IRPGTL----AANMIAGHLLLTLLGNTGPSM--TMNLISMLIIGQMLLL-ILESAVAMIQAYVFSILSTLYSSE 219
Cdd:MTH00132  152 IRPLALgvrlTANLTAGHLLIQLIATAAFVLlpLMPTVAILTATLLFLLtLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-219 2.83e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 98.50  E-value: 2.83e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775   1 MMTNLFSTFDPSTnIFNLSLNWTSTFIGLLLI--PSLFWLTpSRINILwnkMNLTLHNEFKTLLGPKSFNGT--TFIFIS 76
Cdd:MTH00073    1 MNLSFFDQFLSPT-LLGIPLIMLAMLLPWLLFptPTNKWLN-NRLSTL---QIWFLQNFTKQLMLPLNTPGHkwALILTS 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  77 IFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPG 156
Cdd:MTH00073   76 LMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPL 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775 157 TLA----ANMIAGHLLLTLLGNTGPSM--TMNLISMLIIGQMLLL-ILESAVAMIQAYVFSILSTLYSSE 219
Cdd:MTH00073  156 ALGvrltANLTAGHLLIQLISTATLVLlpLMPTVSILTMIVLFLLtLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 71-216 6.02e-24

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 95.02  E-value: 6.02e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  71 TFIFISIFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETIS 150
Cdd:MTH00101   69 SLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETIS 148

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916858775 151 NIIRPGTLA----ANMIAGHLLLTLLGN-----TGPSMTMNLISMLIIgqMLLLILESAVAMIQAYVFSILSTLY 216
Cdd:MTH00101  149 LFIQPMALAvrltANITAGHLLIHLIGGatlalMSISTTTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 15-216 4.55e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 87.40  E-value: 4.55e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  15 IFNLSLNWTSTFIGLLLIPSLFWLTPSRINILWNKMNLTLHNEFKTLLGPKSFNGTTFIfISIFIMMMFNNFLGLFPYIF 94
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  95 TSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGT----LAANMIAGHLLLT 170
Cdd:MTH00172   96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISlgvrLAANLSAGHLLFA 175

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1916858775 171 LLGNTGPSMTM-----NLISMLIIgqMLLLILESAVAMIQAYVFSILSTLY 216
Cdd:MTH00172  176 ILAGFGFNMLCasgflSLFPLLIM--VFITLLEIAVAVIQAYVFCLLTTIY 224
ATP-synt_A pfam00119
ATP synthase A chain;
22-218 1.68e-20

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 85.62  E-value: 1.68e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  22 WTSTFIGLLLIPSLFWLT----PSRINILWNKMNLTLHNEFKTLLGPKSFNGTTFIFISIFIMMMFNNFLGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRKTkklvPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  95 TSTSHLVFTFTIALPMWLSFMMFGWLNH-TNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGTLA----ANMIAGHLLL 169
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSlrlfGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1916858775 170 TLLGNTGPSMTMNLISMLII---GQMLLLILESAVAMIQAYVFSILSTLYSS 218
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIpplLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 75-216 7.88e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 84.29  E-value: 7.88e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  75 ISIFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIR 154
Cdd:MTH00175   87 LSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIR 166

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775 155 PGT----LAANMIAGHLLLTLLGNTGPSMTMNLISMLIIGQMLLLI----LESAVAMIQAYVFSILSTLY 216
Cdd:MTH00175  167 AISlgvrLAANISAGHLLFAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 76-216 4.02e-16

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 73.57  E-value: 4.02e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  76 SIFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNH-TNHMFAHLVPQGTPPaLMSFMVLIETISNIIR 154
Cdd:COG0356    63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELAR 141

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858775 155 PGTLA----ANMIAGHLLLTLLGNTGPSMTMNLISmlIIGQMLLLILESAVAMIQAYVFSILSTLY 216
Cdd:COG0356   142 PLSLSlrlfGNMFAGHIILLLLAGLAPFLLLGVLS--LLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 38-216 4.90e-13

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 66.12  E-value: 4.90e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  38 LTPSRINILWNKMNLTLHNEFKTLLGPKSFNGTTFIfISIFIMMMFNNFLGLFPYIFTSTSHLVFTFTIALPMWLSFMMF 117
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775 118 GWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNIIRPGT----LAANMIAGHLLLTLLGNTGPSM--TMNLISMLIIGQ 191
Cdd:MTH00174  138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISlgvrLAANISSGHLLFSIIASFAWKMinTGILIGSFVPFA 217

                         170       180
                  ....*....|....*....|....*..
gi 1916858775 192 MLLL--ILESAVAMIQAYVFSILSTLY 216
Cdd:MTH00174  218 ILIFvtILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-216 1.30e-12

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 64.43  E-value: 1.30e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  73 IFISIFIMMMFNNFLGLFP-YIFTSTSHLVFTFTIALPMWLSFMMFG-WLNHTNHMFAHLVPQGTPpalmsFMVLIETIS 150
Cdd:PRK05815   75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIIS 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775 151 NIIRPGTLA----ANMIAGHLLLTLLGNTGPSMTMNLISMLIIGqMLLLILESAVAMIQAYVFSILSTLY 216
Cdd:PRK05815  150 EFSRPISLSlrlfGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-216 1.57e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 50.90  E-value: 1.57e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  75 ISIFIMMMFNNFLGLFPYIFTSTSHL-------VFTFTIALPMWLSFM-MFGWLnhtnhmfAHLVpQGTPPALMSFMVLI 146
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNInvtltlaVFTFFITQYAAIKAHgIKGYL-------AHLT-GGTHWSLWIIMIPI 246

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916858775 147 ETISNIIRPGTLA----ANMIAGHLLLTLLGNTGPSMTMNLISMLIIGQMLLLI--LESAVAMIQAYVFSILSTLY 216
Cdd:PRK13419  247 EFIGLFTKPFALTvrlfANMTAGHIVILSLIFISFILKSYIVAVAVSVPFAIFIylLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 74-158 7.30e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 44.49  E-value: 7.30e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  74 FISIFIMMMFnnFLGL-FPYIFTSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETISNI 152
Cdd:MTH00050   27 SVVLFIVLFL--FLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYI 104


                  ....*.
gi 1916858775 153 IRPGTL 158
Cdd:MTH00050  105 IRPVVL 110
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 26-219 4.70e-05

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 42.66  E-value: 4.70e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  26 FIGLLLIPSLFWLTPSRINILWNKMNLTLHNEFKTLlgpKSFNGTTFIFISIFIMMMFNNFLGLFPYIFTSTSHLVFTFT 105
Cdd:MTH00087   10 FMFVFLLQYLLYFKESMLNVLVKKFFGLLIIVFSYS---NKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775 106 IALPMWLSFMMFgwLNHTNHMFAHLVPQGTPPALMSF-MVLIETISNIIRPGTLA----ANMIAGHLLLtllgntgpSMT 180
Cdd:MTH00087   87 YALVAWLSTFLS--FLSKSEKFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTlrltVNLMVGHLIS--------SLL 156

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1916858775 181 MNLISMLIIGQMLLLILESAVAMIQAYVFSILSTLYSSE 219
Cdd:MTH00087  157 NFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-216 6.77e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 39.87  E-value: 6.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916858775  95 TSTSHLVFTFTIALPMWLSFMMFGWLNHTNHMFAHLVPQGTPPALMSFMVLIETI-SNIIRPGTLA----ANMIAGHLLL 169
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTvrllANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1916858775 170 T-LLGNTGPSMTMNLISMLIIGQMLLLILESAVAMIQAYVFSILSTLY 216
Cdd:PRK13417  297 LaLMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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