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Conserved domains on  [gi|1916859014|gb|QOL00776|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Xya japonica]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-319 3.25e-136

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 388.36  E-value: 3.25e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   6 MLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMG 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalil 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALIL-------- 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 166 LSLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTS 245
Cdd:MTH00193  153 LSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSS 232

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859014 246 IIFMSMFISLIFLGGDFCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKILL 319
Cdd:MTH00193  233 ILFMSMLFVLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-319 3.25e-136

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 388.36  E-value: 3.25e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   6 MLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMG 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalil 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALIL-------- 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 166 LSLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTS 245
Cdd:MTH00193  153 LSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSS 232

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859014 246 IIFMSMFISLIFLGGDFCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKILL 319
Cdd:MTH00193  233 ILFMSMLFVLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
17-311 4.85e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 278.59  E-value: 4.85e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  17 MVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  97 PFFSFL--LGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLSLIVLIGS 174
Cdd:pfam00146  86 PFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSL--------LAVVLLAGS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 175 FNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFIS 254
Cdd:pfam00146 158 LSLSEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAV 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859014 255 LIFLGG------DFCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIF 311
Cdd:pfam00146 238 TLFLGGwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 17-306 2.86e-86

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 262.37  E-value: 2.86e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  17 MVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:COG1005    19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  97 PFFSFLLG--FKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLSLIVLIGS 174
Cdd:COG1005    99 PFGPGLVLadLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSL--------LGVVLLAGS 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 175 FNLFDFMIYQ-GYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFI 253
Cdd:COG1005   171 LNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALA 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859014 254 SLIFLGG---DFCMLIFYFSLG---------LVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSL 306
Cdd:COG1005   251 TTLFLGGwlgPFPILPLGGLPGilwfllktlFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-319 3.25e-136

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 388.36  E-value: 3.25e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   6 MLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMG 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalil 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALIL-------- 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 166 LSLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTS 245
Cdd:MTH00193  153 LSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSS 232

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859014 246 IIFMSMFISLIFLGGDFCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKILL 319
Cdd:MTH00193  233 ILFMSMLFVLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 9-317 7.45e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 354.73  E-value: 7.45e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   9 FFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLII 88
Cdd:MTH00225    3 FLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLIL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  89 ALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLSL 168
Cdd:MTH00225   83 SLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALIL--------LSI 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 169 IVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIF 248
Cdd:MTH00225  155 VFLVLTYNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILF 234

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916859014 249 MSMFISLIFLGGDFCM--LIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKI 317
Cdd:MTH00225  235 MSMLTSILFFGGFFVTidLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-315 6.50e-117

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 339.54  E-value: 6.50e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   7 LCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  87 IIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilL 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLIL--------L 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 167 SLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSI 246
Cdd:MTH00143  153 FPLFLSGSFSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANI 232

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859014 247 IFMSMFISLIFLGGDF-----CMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGL 315
Cdd:MTH00143  233 LFMSLLTVVLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-319 6.95e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 306.67  E-value: 6.95e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   6 MLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMG 85
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIEVGlalil 165
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCP----- 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 166 lslIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTS 245
Cdd:MTH00195  156 ---ICLAGSFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSN 232

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859014 246 IIFMSMFISLIFLGGDfCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKILL 319
Cdd:MTH00195  233 IIFMSVLTTILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 6-315 4.20e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 304.53  E-value: 4.20e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   6 MLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMG 85
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalil 165
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLII-------- 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 166 LSLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTS 245
Cdd:MTH00218  153 LSLIILTGGFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMN 232

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 246 IIFMSMFISLIFLGGDFCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGL 315
Cdd:MTH00218  233 ILFMNTLSVILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 9-319 1.58e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 303.47  E-value: 1.58e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   9 FFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLII 88
Cdd:MTH00104    2 FMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  89 ALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLSL 168
Cdd:MTH00104   82 ALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIIL--------LSV 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 169 IVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIF 248
Cdd:MTH00104  154 LLMNGSFTLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIM 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859014 249 MSMFISLIFLGGDFCMLI-------FYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKILL 319
Cdd:MTH00104  234 MNALTTILFLGAFHNPYMpelyttnFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 11-320 3.84e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 302.58  E-value: 3.84e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  11 ISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLIIAL 90
Cdd:MTH00111    9 INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLAL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  91 SVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLSLIV 170
Cdd:MTH00111   89 TIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIIL--------LSLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 171 LIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMS 250
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859014 251 MFISLIFLGGDFCML---IFYFSLG----LVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKILLF 320
Cdd:MTH00111  241 TLTTILFLNPSTLNLppeLFTINLMtktlLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLA 317
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-320 4.98e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 302.31  E-value: 4.98e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   6 MLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMG 85
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  86 LIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalil 165
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLIL-------- 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 166 LSLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTS 245
Cdd:MTH00071  156 LCLILLTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYAN 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 246 IIFMSMFISLIFLGGDFCMLIFYFSLGLVVF-------CFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKIL 318
Cdd:MTH00071  236 ILMMNTLSTILFLGSTYNHLQPELSTMNLMIkasilsmLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPIS 315


                  ..
gi 1916859014 319 LF 320
Cdd:MTH00071  316 TL 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 7-323 5.40e-99

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 294.58  E-value: 5.40e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   7 LCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGL 86
Cdd:MTH00040    4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  87 IIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilL 166
Cdd:MTH00040   84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLIL--------L 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 167 SLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSI 246
Cdd:MTH00040  156 SLVIFSGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANI 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 247 IFMSMFISLIFLGGD--------FCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKIL 318
Cdd:MTH00040  236 IFMNLLSVILFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSL 315


                  ....*
gi 1916859014 319 LFKFI 323
Cdd:MTH00040  316 LNILP 320
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 2-319 4.35e-96

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 287.27  E-value: 4.35e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   2 LLKEMLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFS 81
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  82 PIMGLIIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevgl 161
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLIL---- 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 162 alilLSLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLA 241
Cdd:MTH00134  157 ----LSVIIFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLA 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 242 EYTSIIFMSMFISLIFLGGDFCMLI-------FYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCG 314
Cdd:MTH00134  233 EYANILLMNTLSAILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLA 312


                  ....*
gi 1916859014 315 LKILL 319
Cdd:MTH00134  313 LPIAF 317
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 7-319 5.63e-95

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 283.98  E-value: 5.63e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   7 LCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGL 86
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  87 IIALSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilL 166
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLIL--------L 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 167 SLIVLIGSFNlFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSI 246
Cdd:MTH00010  155 SALLILQTFS-FSKIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANI 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859014 247 IFMSMFISLIFLGgdFCMLIFYFSLGL------VVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKILL 319
Cdd:MTH00010  234 LIMSLFTSVFFTS--FIPSIFISDLMLilktvfLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
NADHdh pfam00146
NADH dehydrogenase;
17-311 4.85e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 278.59  E-value: 4.85e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  17 MVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:pfam00146   6 LVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  97 PFFSFL--LGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLSLIVLIGS 174
Cdd:pfam00146  86 PFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSL--------LAVVLLAGS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 175 FNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFIS 254
Cdd:pfam00146 158 LSLSEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAV 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859014 255 LIFLGG------DFCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIF 311
Cdd:pfam00146 238 TLFLGGwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-317 1.21e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 268.13  E-value: 1.21e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   6 MLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMG 85
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  86 LIIALSVWLVFPFFS--FLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglal 163
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLII------ 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 164 ilLSLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEY 243
Cdd:MTH00054  155 --ISVVLCVGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEY 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 244 TSIIFMSMFISLIFLGGDFCMLI----------FYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFC 313
Cdd:MTH00054  233 CHIILMSTFGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVS 312


                  ....
gi 1916859014 314 GLKI 317
Cdd:MTH00054  313 GILI 316
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 17-306 2.86e-86

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 262.37  E-value: 2.86e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  17 MVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:COG1005    19 LVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVI 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  97 PFFSFLLG--FKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLSLIVLIGS 174
Cdd:COG1005    99 PFGPGLVLadLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSL--------LGVVLLAGS 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 175 FNLFDFMIYQ-GYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFI 253
Cdd:COG1005   171 LNLSEIVEAQaGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALA 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859014 254 SLIFLGG---DFCMLIFYFSLG---------LVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSL 306
Cdd:COG1005   251 TTLFLGGwlgPFPILPLGGLPGilwfllktlFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 2-315 5.47e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 256.59  E-value: 5.47e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   2 LLKEMLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFS 81
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  82 PIMGLIIALSVWLVFPFFSFLL--GFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIev 159
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLII-- 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 160 glalilLSLIVLIGSFNLFDFMIYQG-YCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLI 238
Cdd:MTH00216  159 ------ISVLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALF 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 239 FLAEYTSIIFMSMFISLIFLGG--------DFCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLI 310
Cdd:MTH00216  233 FLAEYAHIILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVI 312


                  ....*
gi 1916859014 311 FFCGL 315
Cdd:MTH00216  313 FVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
17-306 8.41e-81

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 248.18  E-value: 8.41e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  17 MVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:PRK06076   20 LVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVI 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  97 PFFSFLL--GFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLSLIVLIGS 174
Cdd:PRK06076  100 PFGPELViaDLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSL--------LAVVLLAGS 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 175 FNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFIS 254
Cdd:PRK06076  172 LNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALIT 251

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1916859014 255 LIFLGG--------DFCMLIFYFSL--GLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSL 306
Cdd:PRK06076  252 TLFLGGwlppfplgGGIPGAIWFVLkvAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-317 1.87e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 214.88  E-value: 1.87e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014   1 MLLKEMLCFFISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYF 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  81 SPIMGLIIALSVWLVFPFFS--FLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIe 158
Cdd:MTH00029   81 APIISFTLAILAWAIVTMDQgvFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLII- 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 159 vglalilLSLIVLIGSFNLFDFMIYQGYCWFAFFCFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLI 238
Cdd:MTH00029  160 -------ISVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALF 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 239 FLAEYTSIIFMSMFISLIFLGG-----------------------DFCMLIFYFSLGLVVFCFIWVRGTFPRFRYDKLMY 295
Cdd:MTH00029  233 FLAEYSNIILMSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMK 312

                         330       340
                  ....*....|....*....|..
gi 1916859014 296 LAWKSFLPLSLNFLIFFCGLKI 317
Cdd:MTH00029  313 LLWKTYLPLSLGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 17-317 1.28e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 197.81  E-value: 1.28e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  17 MVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLIIALSVWLVF 96
Cdd:MTH00090    6 MIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  97 PFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIEVglALILLSLIVLIGSFN 176
Cdd:MTH00090   86 PYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLS--IMLHNNSFSFVSSFS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 177 LFDFMIYqgycwFAFFCfplliscfaSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLI 256
Cdd:MTH00090  164 LSLFVIY-----LPFLI---------MIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVL 229

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916859014 257 FLggDFCMLIFYFSLGLVVFcfiwVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFFCGLKI 317
Cdd:MTH00090  230 FF--KFSFLMLFLIFSLLIF----IRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 10-312 2.08e-45

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 155.85  E-value: 2.08e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  10 FISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLIIA 89
Cdd:MTH00058    4 LVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLV 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  90 LSVWLVFPFFSFLLGFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVS-MVLMIEVGLALillsl 168
Cdd:MTH00058   84 VFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACfMCIVIFCGLCY----- 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 169 ivliGSFNLFDFMiyqGYCWFAFFCFPLLISCFASC-LAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSII 247
Cdd:MTH00058  159 ----GSYSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIF 231

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859014 248 FMSMFISLIFLGGDFCMLIFYFSLglvvFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFF 312
Cdd:MTH00058  232 IFSWLGSVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVI 292
ndhA CHL00032
NADH dehydrogenase subunit 1
 10-320 1.79e-31

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 120.83  E-value: 1.79e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  10 FISYFTTMVCVLVSIAFLTLLERSGLGYIQVRKGPNKVGLMGVLQPFSDAIKLFSSEQTLPVLSNYMMYYFSPIMGLIIA 89
Cdd:CHL00032   30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  90 LSVWLVFPFFSFLL--GFKYGFLFFLCLSSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLS 167
Cdd:CHL00032  110 LLSYLVIPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCV--------LS 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 168 LIVLIGSFNLFDfmIYQGYCWFAFFCFPL------LISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLA 241
Cdd:CHL00032  182 ISLLSNSLSTVD--IVEAQSKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVA 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 242 EYTSIIFMSMFISLIFLGG-DFCM-LIFYFSLG-----------------------LVVFCFIWVRGTFPRFRYDKLMYL 296
Cdd:CHL00032  260 SYLNLLVSSLFVTVLYLGGwNLSIpYIFIPELFeinktggvfgttigifitlaktyLFLFISITTRWTLPRLRMDQLLNL 339

                         330       340
                  ....*....|....*....|....
gi 1916859014 297 AWKSFLPLSLNFLIFFCGLKILLF 320
Cdd:CHL00032  340 GWKFLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
38-312 5.64e-24

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 99.49  E-value: 5.64e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014  38 IQVRKGPnkvglmGVLQPFSDAIKLFSSEQTLPVLSNyMMYYFSPIMGLIIALSVWLVFPFFSF--LLGFKYGFLFFLCL 115
Cdd:COG0650    32 LQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAMLLAALLVPVLTTgpPLSFSGDLIVLVYL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 116 SSLSVYSLMISGWASNSNYALLGSLRAVAQTISYEVSMVLMIevglalilLSLIVLIGSFNLFDFMIYQ---GYCWFAFF 192
Cdd:COG0650   105 LALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVL--------FALALLAGSTSLSDIVAYQaahGPLLLSPS 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859014 193 CFPLLISCFASCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYTSIIFMSMFISLIFLGGD------FCMLI 266
Cdd:COG0650   177 LLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGialtllLALLL 256

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1916859014 267 FYFSLGLVVFCFIWVRGTFPRFRYDKLMYLAWKSFLPLSLNFLIFF 312
Cdd:COG0650   257 FLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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