|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.61e-141 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 411.85 E-value: 1.61e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 1 MLSFLGLLVFSMPLIFFGSlSWWIIQSLFFFMGGLLVFNFIFTGGFSKISYFGGMDNLGFGLILLSIWICGLMIMSSSSI 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKN-SWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 81 YFNKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLF 160
Cdd:MTH00163 80 YKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 161 YIYKMSGSLYMGNIDLVGS-GLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLI 239
Cdd:MTH00163 160 YLYNNSGSLSFFLLNFFGSlNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 240 SMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLAN 319
Cdd:MTH00163 240 KLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLAN 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 320 ISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLY 399
Cdd:MTH00163 320 IIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLY 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1916859092 400 SFSQHGKMYSGLGACSGGLVREYLLLILHWFPLNLLVLGGNFWLY 444
Cdd:MTH00163 400 SYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-437 |
5.38e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 331.56 E-value: 5.38e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 2 LSFLGLLVFSMPLIFFGSLSWWIIQSLFFFMGGLLVFNFIFTG-GFSKISYFGGMDNLGFGLILLSIWICGLMIMSSSSI 80
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFlMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 81 YFNKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLF 160
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 161 YIYKMSGSLYMG-NIDLVGSGLISY---ICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYF 236
Cdd:MTH00205 161 FLNSLNFSLSMFfNFPLNFSDFYLFlywIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 237 MLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 317 LANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1916859092 397 YLYSFSQHGKMYSGLGACSGGLVREYLLLILHWFPLNLLVL 437
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILIL 441
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
36-442 |
1.24e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 327.18 E-value: 1.24e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 36 LVFNFIFTGGFSKISYFGGMDNLGFGLILLSIWICGLMIMSSSSIYFNKIYEGVFLGLIIFLLMMLICAFISLDYFSFYI 115
Cdd:MTH00150 3 LLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 116 FFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVGSGLISY----ICLILAF 191
Cdd:MTH00150 83 FFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMglwgLLVFLAF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 192 LVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLK 271
Cdd:MTH00150 163 LVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 272 ALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLI 351
Cdd:MTH00150 243 SLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFC 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 352 SSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYSFSQHGKMYSGLGACSGGLVREYLLLILHWFP 431
Cdd:MTH00150 323 IINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVP 402
|
410
....*....|.
gi 1916859092 432 LNLLVLGGNFW 442
Cdd:MTH00150 403 LLLLILKSDLL 413
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-437 |
5.89e-107 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 324.00 E-value: 5.89e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 1 MLSFLGLLVFSMPLIFFGSLSWW--IIQSLFFFMGGLLVFNFIFTGGFSKISYFGGMDNLGFGLILLSIWICGLMIMSSS 78
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWalTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 79 SIYFNKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVG 158
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 159 LFYIYKMSGSLYMGNIDLVGSGL----ISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRI 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIylmnLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 235 YFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGM 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 315 FCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1916859092 395 SLYLYSFSQHGKMYSGLGACSGGLVREYLLLILHWFPLNLLVL 437
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILIL 443
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
54-437 |
1.36e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 310.59 E-value: 1.36e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 54 GMDNLGFGLILLSIWICGLMIMSSSS--IYFNKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGW 131
Cdd:MTH00124 57 GIDQISAPLLVLSCWLLPLMILASQNhlQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRW 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 132 GYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVG-------SGLISYICLILAFLVKMPMFLVHLWL 204
Cdd:MTH00124 137 GNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQLTHptltnswTNLLLWLACLMAFMVKMPLYGLHLWL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 205 PSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGL 284
Cdd:MTH00124 217 PKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 285 VLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLM 364
Cdd:MTH00124 297 VIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLM 376
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859092 365 GEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYSFSQHGKMYSGLGACSGGLVREYLLLILHWFPLNLLVL 437
Cdd:MTH00124 377 GELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLIL 449
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
24-437 |
8.35e-98 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 300.74 E-value: 8.35e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 24 IIQSLFFFMGGLLVFNFIFTGGFSKISYFGGMDNLGFGLILLSIWICGLMIMSSSSI--YFNKIYEGVFLGLIIFLLMML 101
Cdd:MTH00044 28 ISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHlsNNSPNNQRTFISLIIIILTAL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 102 ICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVGSGL 181
Cdd:MTH00044 108 IITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTS 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 182 -------ISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRI--YFMLISMgVIMNFFFISI 252
Cdd:MTH00044 188 lssnsssIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLinLFSLPSA-NNISFILIVF 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 253 SLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLV 332
Cdd:MTH00044 267 CCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSI 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 333 NKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYSFSQHGKMYSGLG 412
Cdd:MTH00044 347 TRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWIS 426
|
410 420
....*....|....*....|....*
gi 1916859092 413 ACSGGLVREYLLLILHWFPLNLLVL 437
Cdd:MTH00044 427 NVSPISSREHLLIFLHLLPLILIII 451
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
12-437 |
1.53e-92 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 287.20 E-value: 1.53e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 12 MPLIFFGSLSW-W---IIQSLFFFMGGLLVFNFIFtGGFSKISYFGGMDNLGFGLILLSIWICGLMIMSSSS------IY 81
Cdd:MTH00068 12 LPTTWLSPKKWlWtltTTNSLIIAFLSLMWFNLPS-ETMNFTNKYFGIDQISSPLLILTCWLLPLMILASQNhlknepIN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 82 FNKIYegvfLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFY 161
Cdd:MTH00068 91 RQRTY----ISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 162 IYKMSGSLYMGNIDLVG--------SGLISYICLiLAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLR 233
Cdd:MTH00068 167 LQNSLGSLSLILLELMSpmqlmtytNKIWWLACL-LAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILR 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 234 IYFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSG 313
Cdd:MTH00068 246 ISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSA 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 314 MFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAV 393
Cdd:MTH00068 326 LFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAA 405
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1916859092 394 YSLYLYSFSQHGKMYSGLGACSGGLVREYLLLILHWFPLNLLVL 437
Cdd:MTH00068 406 YTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLIL 449
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
12-443 |
4.42e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 278.31 E-value: 4.42e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 12 MPLIFFGSLSW-WI---IQSLFFFMGGLLVFNFIFTGGFSKISYFGgMDNLGFGLILLSIWICGLMIMSSS------SIY 81
Cdd:MTH00110 12 IPLTWLSKNNMiWInttTYSLLISLISLLLLNQPNDNSLNFSLLFF-SDSLSTPLLILTTWLLPLMLMASQhhlskePLT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 82 FNKIYegvfLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFY 161
Cdd:MTH00110 91 RKKLY----ITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 162 IYKMSGSL-------YMGNIDLVGSGLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRI 234
Cdd:MTH00110 167 IQNNLGSLnflllqlWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRI 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 235 YFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGM 314
Cdd:MTH00110 247 TIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSML 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 315 FCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVY 394
Cdd:MTH00110 327 FCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALY 406
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1916859092 395 SLYLYSFSQHGKMYSGLGACSGGLVREYLLLILHWFPLNLLVLGGNFWL 443
Cdd:MTH00110 407 SLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIIL 455
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
2.24e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 276.05 E-value: 2.24e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 1 MLSFLGLLVFSMPLIFFGSLSWWIIQSLFFFMGGLLVFNFIFTG--GFSKISYFGGMDNLGFGLILLSIWICGLMIMSSS 78
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSevGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 79 SIYFNK--IYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLL 156
Cdd:MTH00206 81 NHMKNEpiNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 157 VGLFYIYKMSGSLYM----GNIDLVGSGLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLL 232
Cdd:MTH00206 161 IALLFLQNSLGSLSLyilyFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 233 RIYFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSS 312
Cdd:MTH00206 241 RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 313 GMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSA 392
Cdd:MTH00206 321 ALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1916859092 393 VYSLYLYSFSQHGKMYSGLGACSGGLVREYLLLILHWFPLNLLVLGGNF 441
Cdd:MTH00206 401 IYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNL 449
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
1.47e-86 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 271.83 E-value: 1.47e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 1 MLSFLGLLVFSMPLIFFGSLSW-W---IIQSLFFFMGGLLVFNFIFTGGFSKISYFGGMDNLGFGLILLSIWICGLMIMS 76
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWlWtttLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 77 SSSIYFNK--IYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMP 154
Cdd:MTH00127 81 SQNHTAPEpiNRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 155 LLVGLFYIYKMSGSLYMGNIDLV--------GSGLISYICLiLAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKL 226
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSqplqlsswADKLWWAGCL-LAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 227 GGYGLLRIYFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLA 306
Cdd:MTH00127 240 GGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 307 HGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLML 386
Cdd:MTH00127 320 HGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGL 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1916859092 387 MSFLSAVYSLYLYSFSQHGKMYSGLGACSGGLVREYLLLILHWFPLNLLVL 437
Cdd:MTH00127 400 GTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLIL 450
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-399 |
1.08e-52 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 183.74 E-value: 1.08e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 49 ISYFGGMDNLGFGLILLSIWICGLMIMSSssiyFNKIYEGV--FLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTIL 126
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILAS----WNEIKKRPklYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 127 LILGWGYqPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVGSGL------ISYICLILAFLVKMPMFLV 200
Cdd:COG1008 150 LIGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLpltaqlLLFLAFFIAFAVKVPMFPF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 201 HLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRI-YFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSV 279
Cdd:COG1008 229 HTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFaLPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 280 AHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPP 359
Cdd:COG1008 309 SHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1916859092 360 SLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLY 399
Cdd:COG1008 389 TSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-384 |
2.68e-48 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 167.11 E-value: 2.68e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 107 SLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVGSG------ 180
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 181 -LISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVIMNFFFISISLLGGVM 259
Cdd:pfam00361 81 lLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 260 ISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLA-NISYERMGSRSLLVNKGLMS 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1916859092 339 FMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFML 384
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
60-399 |
1.05e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 167.54 E-value: 1.05e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 60 FGLILLSIWICGLMIMSSSSIYFnKIYEgvFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQ 139
Cdd:MTH00217 84 FFLILTALLTPICILISWNSIKF-LIKE--FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQ 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 140 AGVYLMFYTLFASMPLLVGLFYIYKMSGSL-YMGNIDLVGSGLISYICLILAFL---VKMPMFLVHLWLPSAHVEAPVAG 215
Cdd:MTH00217 161 ASYYFFFYTFIGSVFMLLGIFTLYSYAGTTdYQALCCLKIEKELQYFIFLGFFLslaIKIPKIPFHIWLPQAHVEAPVAG 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 216 SMILAGVLLKLGGYGLLRIYFMLISMGV-IMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNN 294
Cdd:MTH00217 241 SVILAGVLLKLGGYGFIRFSWPLLPEASeYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTI 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 295 WGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMV 374
Cdd:MTH00217 321 QGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAF 400
|
330 340
....*....|....*....|....*
gi 1916859092 375 GWSWFVMFMLMLMSFLSAVYSLYLY 399
Cdd:MTH00217 401 EYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
23-399 |
5.40e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 163.31 E-value: 5.40e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 23 WIIQSLFFFMGGLLVFnfiftgGFSKISYFGgmdnlgFGLILLSIWICGLMIMSSSSIYFNKiyegvFLGLIIFLLMMLI 102
Cdd:MTH00204 64 WIISPTLNFQWGPLVF------AVDGVSLFF------ILLTTLLIPICILISWKSIKFLFKE-----FLLCLLFLEVLLI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 103 CAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGS---LYMGNIDL-VG 178
Cdd:MTH00204 127 GVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTtdyQILLNIKLpLS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 179 SGLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRI-YFMLISMGVIMNFFFISISLLGG 257
Cdd:MTH00204 207 IQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAV 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 258 VMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLM 337
Cdd:MTH00204 287 IYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLT 366
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1916859092 338 SFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLY 399
Cdd:MTH00204 367 LTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
1.09e-43 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 159.33 E-value: 1.09e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 48 KISYFGGMDNLGFGLILLSIWICGLMIMSSSsiYFNKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILL 127
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 128 ILGWGyQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSG-----SLYMGNIDLVGSGLISYICLILAFLVKMPMFLVHL 202
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgtfdlLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 203 WLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYF-MLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAH 281
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 282 MGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSL 361
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 1916859092 362 NLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLY 399
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
49-399 |
3.22e-42 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 155.75 E-value: 3.22e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 49 ISYFGGMDNLGFGLILLSIWICGLMIMSSSSIyfNKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLI 128
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEE--IKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 129 LGWGYqPERLQAGVYLMFYTLFASMPLLVGLFYIY----KMSGS-----LYMGNIDLVGSGLIsYICLILAFLVKMPMFL 199
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTfdiadLLNLPLPPGVQYWL-FLAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 200 VHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRI-YFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSS 278
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFsLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 279 VAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMP--SMTMWWFLLISSSMa 356
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPvlAAFFLFFAMASLGL- 388
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1916859092 357 aPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLY 399
Cdd:PRK05846 389 -PGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-398 |
3.10e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 147.76 E-value: 3.10e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 55 MDNLGFGLILLSIWI--CGLMIMSSSSIYFNKiyegVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWG 132
Cdd:MTH00226 100 VDGISIYFIILTGFIvpCSILISWHSVKYLTK----SFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 133 YQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGS---LYMGNIDLVGSGLIS---YICLILAFLVKMPMFLVHLWLPS 206
Cdd:MTH00226 176 SREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTtdyLTLASCSHVVSEQTQkwiFLGIFLAMAVKIPIFPFHIWLPK 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 207 AHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVI-MNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLV 285
Cdd:MTH00226 256 AHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 286 LGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMG 365
Cdd:MTH00226 336 SITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIG 415
|
330 340 350
....*....|....*....|....*....|...
gi 1916859092 366 EIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYL 398
Cdd:MTH00226 416 EYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
27-435 |
1.79e-36 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 138.12 E-value: 1.79e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 27 SLFFFMGGLLVFNFIFTGGFSKISYFGGMDNLGFGLILLSIWICGLMIMSSSSIYFNKIYEGVflgliifLLMMLICAFI 106
Cdd:MTH00094 8 SPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNL-------LILICLLFFV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 107 SLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMsgsLYMGNIDLVGSGLISYIc 186
Cdd:MTH00094 81 SSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFF---FSLCYFDFFLSWEMFFI- 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 187 LILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIyfmLISMGVIMNFFFISISLLGGVMISIVCLC 266
Cdd:MTH00094 157 LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRI---LGSLNFVYNNFWIIFSLLGMILSSFCCVF 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 267 QSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMW 346
Cdd:MTH00094 234 QSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLI 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 347 WFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYSFSQHGKMYSGLGACSGGLVREYLLLI 426
Cdd:MTH00094 314 FSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMM 393
|
....*....
gi 1916859092 427 LHWFPLNLL 435
Cdd:MTH00094 394 FNMFWLSLF 402
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
61-403 |
8.58e-31 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 122.95 E-value: 8.58e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 61 GLILLSIWICGLMIMSSSSIYFNKIYEG-VFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYqPERLQ 139
Cdd:COG0651 79 ALFLLLTALVALAVLLYSIGYMRHERRGrRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT-KEALR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 140 AGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVGSGL------ISYICLILAFLVKMPMFLVHLWLPSAHVEAPV 213
Cdd:COG0651 158 AGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELdpglllAAFALLLVGFGIKAALFPLHFWLPDAYPAAPS 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 214 AGSMILAGVLLKLGGYGLLRIYFMLI--SMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMT 291
Cdd:COG0651 238 PVSALLSGLLTKVGVYAILRVLTLLFgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGL 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 292 MNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPsMTMWWFLLISSSMAA-PPSLNLMGEIGLL 370
Cdd:COG0651 318 GTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMP-LTAAAFLIGALALAGlPPLSGFVSKWLLL 396
|
330 340 350
....*....|....*....|....*....|....
gi 1916859092 371 ISMV-GWSWFVMFMLMLMSFLSAVYSLYLYSFSQ 403
Cdd:COG0651 397 QAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-365 |
1.41e-25 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 108.97 E-value: 1.41e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 54 GMDNLGFGLILLSIWICGLMIMSSSSIyfnKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGY 133
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWKV---TRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 134 QpERLQAGVYLMFYTLFASMPLLVGLFYIyKMSGSLYMGNIDLVGS-------GLISYICLILAFLVKMPMFLVHLWLPS 206
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLAL-ALSGDTFTFDLAELGAksyplalELLLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 207 AHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVImnFFFISISLLGGVMISIVCLC---QSDLKALIAYSSVAHMG 283
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHV--YFAPALAILGVVNIIYGALNafaQDNVKRRLAYSSVSHMG 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 284 LVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMtmwWFLLISSSMAappSLNL 363
Cdd:PRK12561 289 FVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKT---FALFTASSMA---SLAL 362
|
..
gi 1916859092 364 MG 365
Cdd:PRK12561 363 PG 364
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-398 |
1.50e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 96.87 E-value: 1.50e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 90 FLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLIlGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSL 169
Cdd:PRK08375 108 FYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 170 YM----GNIDLVGSGLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVI- 244
Cdd:PRK08375 187 NMadlaGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRf 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 245 ---MNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANIS 321
Cdd:PRK08375 267 algLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAI 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859092 322 YERMGSRSLLVNKGLMSFMPsMTMWWFLLISSSMA-APPSLNLMGEIGLLISMVG-WSWFVMFMLMLMSFLSAVYSLYL 398
Cdd:PRK08375 347 EVTYGTRRLSELSGLGRRMP-LTAAAFAVASLSLIgVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRI 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
49-357 |
6.58e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 92.07 E-value: 6.58e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 49 ISYFGGMDNLGFGLILLSIWICGLMIMSSS-SIYFNKIYegvfLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILL 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDeSIQRPRFY----YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 128 ILGWGYQpERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSlymGNIDL---------VGSGLISYICLILAFLVKMPMF 198
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGA---SSFDYeplrshtlpLSTQLLLLAPILVGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 199 LVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLR--IYFMLISMGVIMNFFFI--SISLLGGVMISIVclcQSDLKALI 274
Cdd:PRK06473 223 PFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRfgVGLFPEAWVYLAPWLATwaVVSVLYGASCAIA---QKDMKKMV 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 275 AYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSS 354
Cdd:PRK06473 300 AYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGV 379
|
...
gi 1916859092 355 MAA 357
Cdd:PRK06473 380 MAS 382
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
54-356 |
2.83e-19 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 90.00 E-value: 2.83e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 54 GMDNLGFGLILLSIWICGLMIMSSSSIYFNKIyegvflgliIFLLMML------ICAFISLDYFSFYIFFEGSLIPTILL 127
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSR---------LFYFLMLamysgqIGLFSSRDLLLFFIMWELELIPVYLL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 128 ILGWGYQpERLQAGVYLMFYTLFASMPLLVGLFYIykmsgSLYMGNIDL------------VGSGLISYICLILAFLVKM 195
Cdd:CHL00011 152 LSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGM-----GLYGSNEPTlnfetlanqsypVALEILFYIGFLIAYAVKL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 196 PMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYF-MLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALI 274
Cdd:CHL00011 226 PIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMeLLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 275 AYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMtmwwFLLISS- 353
Cdd:CHL00011 306 AYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKI----FTMFSSf 381
|
...
gi 1916859092 354 SMA 356
Cdd:CHL00011 382 SMA 384
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-393 |
1.14e-18 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 88.23 E-value: 1.14e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 54 GMDNLGFGLILLSIWICGLMIMSSSSIYFNKiyeGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGY 133
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAWPVTFKP---KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 134 QpERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVGSG------LISYICLILAFLVKMPMFLVHLWLPSA 207
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDfglgfqLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 208 HVEAPVAGSMILAGVLLKLGGygllriyFMLISMGVIM-----NFFFISISLLGGVMI---SIVCLCQSDLKALIAYSSV 279
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGG-------YALLRMNAGMlpdahAQFAPLLIVLGVVNIiyaALTSFAQRNLKRKIAYSSI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 280 AHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPP 359
Cdd:PRK02546 313 SHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPG 392
|
330 340 350
....*....|....*....|....*....|....
gi 1916859092 360 SLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAV 393
Cdd:PRK02546 393 MSGFVAELMVFVGFATSDAYTLPFRVVVVFLAAV 426
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
49-407 |
2.60e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 80.91 E-value: 2.60e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 49 ISYFGGMDNLGFGLILLSIWICGLMIMSSSSiyfNKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLI 128
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSIGE---NTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 129 LGWGYQpERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGS--LYMGNIDL----VGSGLISYICLILAFLVKMPMFLVHL 202
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGStsFDYDAISTqnlsLNTQLILLTGLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 203 WLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLI--SMGVIMNFFFI--SISLLGGVMISIVclcQSDLKALIAYSS 278
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFpqTWSLVAPGLAIigTISVIYGALSAIA---QKDIKRMVAYSS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 279 VAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAP 358
Cdd:PRK07363 304 IGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASA 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1916859092 359 PSLNLMGEIGLLISMVG-WSWFVMFMLM--LMSFLSAVYSLYLYSFSQHGKM 407
Cdd:PRK07363 384 GIPGLVGFVAEFIVFQGsFSTFPIPTLLciVASGLTAVYFVILLNRTCFGRL 435
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
23-375 |
5.34e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 76.50 E-value: 5.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 23 WIIQSLFFFMGGLLVFNFIFTGGFSKISYFGGM--------DNLGFGLILLSIWICglmiMSSSSIYFNKIYEGVFLGLI 94
Cdd:MTH00062 3 FFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNvfnglfifDSLSFYLILLVLFLG----LYSQVMFYNLLSGVSRFFLF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 95 IFLLMMLICaFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNI 174
Cdd:MTH00062 79 LSLIFSILC-FCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 175 DLVGS-GLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVimnFFFISIS 253
Cdd:MTH00062 158 GSDDSvSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLC 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 254 LLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVN 333
Cdd:MTH00062 235 CLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLL 314
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1916859092 334 KGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVG 375
Cdd:MTH00062 315 KSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG 356
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-315 |
3.98e-12 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 68.10 E-value: 3.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 1 MLSFLGLLVFSMPLIFFGSLSWWIIQSLFFFMGGLLVFNFIFT---GGFSKISYFGGMDNLGFGLILLSIWICGLMIMSS 77
Cdd:PRK08668 3 LTLLLLTPLIGSVLAYLLKKINEKIGVIGNALPLLFLIKLYFTlkvGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 78 SSIYF-----NKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILgWGYQPERLQAGVYLMFYTLFAS 152
Cdd:PRK08668 83 FSVAFfmvseKTKNDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 153 MpLLVGLFYIYKMSGSL-------YMGNIDLVGSGLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLK 225
Cdd:PRK08668 162 A-MLYAIFLIYAKTGTFdfadisqGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 226 LGGYGLLRIYFMLISMGVIMNFFFIS--------ISLLGGVMI---SIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNN 294
Cdd:PRK08668 241 LGAYGFLLVLYVLPGTKLFSEFGTYRgvplfnyiLAWLGNISIivgTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTS 320
|
330 340
....*....|....*....|.
gi 1916859092 295 WGLMSSYTLMLAHGLCSSGMF 315
Cdd:PRK08668 321 LGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-362 |
3.47e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.12 E-value: 3.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 90 FLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSL 169
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 170 YMG----NIDLVGSGL--ISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILaGVLLKLGGYGLLRIYFMLISMGV 243
Cdd:PRK08376 203 NMAylavKMSENPTVVakIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML-LVIKQAGLYALARVLFSIYGPAI 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 244 IMNF------FFISISLLGGVMISIVclcQSDLKALIAYSSVAHMGLVLGGI---MTMNNWGLMSSYTLM---------L 305
Cdd:PRK08376 282 NLATvgwviiILGCLTMFVGVAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgvgLAALGDPAMASYGEIalaggiyhiV 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859092 306 AHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPsMTMWWFLLISSSMAAPPSLN 362
Cdd:PRK08376 359 NHALYKALLFLTAGAVIYETGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-394 |
8.36e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 63.60 E-value: 8.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 106 ISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMpLLVGLFYIYKMSGSLYMGNIDLVGSGL---- 181
Cdd:PRK12662 128 VSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATF-YLIGIGFLYAITGTLNMGDMFLIIQDLptnr 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 182 ---ISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFM-----LISMGVIMNFFFISIS 253
Cdd:PRK12662 207 aiqIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILA 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 254 LLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVN 333
Cdd:PRK12662 287 ALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDC 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1916859092 334 KGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMV-GWSWFVMFMLMLMSFLSAVY 394
Cdd:PRK12662 367 LNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIY 428
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-324 |
1.81e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 62.66 E-value: 1.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 104 AFISLDYFSFYIFFEGSLIPTILLIlGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVGSGLIS 183
Cdd:PRK07234 110 AFVCADLISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 184 YIclILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVIMNFFFISISLLGgvmiSIV 263
Cdd:PRK07234 189 LI--ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLF 262
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916859092 264 CLCQSDLKALIAYSSVAHMGLVLGGIMTMnnwGLmssytLMLAHGLCSSGMFCLANISYER 324
Cdd:PRK07234 263 ALLEKDLKRMLAFSTISQLGFILAAPLVG---GL-----YALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
24-359 |
2.61e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 62.30 E-value: 2.61e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 24 IIQSLFFFMGGLLVFNFIFTGGFSKISYFGG----------MDNLGFGLILLSIWIcGLMIMSSSSIYF-----NKIYEG 88
Cdd:PRK12667 39 LLVSLITLILSILLFIQVYSSNKPIVYLFGGwpapigivyeVDLLGALLGLLTALV-MFLILIYSYWYLehesgPEWYYT 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 89 VFLGLIIFLLMMLICAfislDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGS 168
Cdd:PRK12667 118 LLLGLEAGMLGILLTG----DAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGT 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 169 LYMGNI-----------------DLVGSGLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGL 231
Cdd:PRK12667 194 LNMADLsakirglsfpltgglagNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAI 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 232 LRIYFML----ISMGVIMNFFFISISLLGGVMI---SIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLM 304
Cdd:PRK12667 274 IRFLYTIfgisPSLIDFRAALSPILIILGAVSAiigALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHI 353
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1916859092 305 LAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPP 359
Cdd:PRK12667 354 INHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPP 408
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
90-375 |
4.15e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 61.67 E-value: 4.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 90 FLGLIIFLLMMLIcafISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSL 169
Cdd:PRK08667 116 LTALFILSMLGVV---ASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 170 YMGnIDLVGSGLIS--YICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVIMNF 247
Cdd:PRK08667 193 ELS-PLGASAGILSlvFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGV 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 248 FFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLML-----------AHGLCSSGMFC 316
Cdd:PRK08667 272 LILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALlalggalfhslNHALFKSLLFL 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859092 317 LANISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVG 375
Cdd:PRK08667 352 TAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQ 410
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
96-399 |
3.84e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 58.61 E-value: 3.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 96 FLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQpERLQAGVYLMFYTLFASMPLLVGLFYIYKMS------GSL 169
Cdd:PRK08676 110 LLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqalgtGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 170 YMGNIDLVGSGL------ISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGV 243
Cdd:PRK08676 189 NWTELAAHASLLspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGA 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 244 IMNFFFISISlLGGVMISIVC---LCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANI 320
Cdd:PRK08676 269 AEQFSNVLIG-LGIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGI 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859092 321 SYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLY 399
Cdd:PRK08676 348 LHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-104 |
2.81e-08 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 51.76 E-value: 2.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 1 MLSFLGLLVFSMPLIFFGSLSWW----IIQSLFFFMGGLLVFNFIFTGGFSKISYFGGMDNLGFGLILLSIWICGLMIMS 76
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttsTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1916859092 77 SSSIYFN--KIYEGVFLGLIIFLLMMLICA 104
Cdd:pfam01059 81 SQKHLKSepNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-370 |
9.51e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 54.20 E-value: 9.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 89 VFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLiLGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGS 168
Cdd:PRK12665 112 IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 169 LYMGNIDL------VGSGLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMG 242
Cdd:PRK12665 191 LNMADLAVrldelpSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGG 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 243 VIMNFFFIsISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISY 322
Cdd:PRK12665 271 GLDTLLMV-VALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIE 349
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 1916859092 323 ERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLL 370
Cdd:PRK12665 350 RQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
90-362 |
1.32e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 53.99 E-value: 1.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 90 FLGLIIFLLMMLiCAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSL 169
Cdd:PRK12646 113 YFYLTLFMFSMI-GIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 170 YMGNI-----DLVGSGLI--SYICLILAFLVKMPMFLVHLWLPSAhVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMG 242
Cdd:PRK12646 192 NITEIlgqadHIKNHGLFipMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 243 VIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLV-----LGGIMTMNNWGLMSS-YTLML--------AHG 308
Cdd:PRK12646 271 NMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMImamvgIGGGYAQHQQDAIASiYVFVLfaalfhlmNHA 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1916859092 309 LCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTMwWFLLISSSMAAPPSLN 362
Cdd:PRK12646 351 IFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
182-398 |
1.89e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.01 E-value: 1.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 182 ISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYfmLISMGVIMNFF----FISISLLGG 257
Cdd:PRK06458 215 LAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYY--ILIDAAIGSDFpgrlLLIFGLLSV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 258 VMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLM 337
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLL 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1916859092 338 SFMPsMTMWWFLLISSSMA-APPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYL 398
Cdd:PRK06458 373 KVSP-LTGWGLMLGALAIAgMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVR 433
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
62-401 |
4.33e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.87 E-value: 4.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 62 LILLSIwICGLMIMSSSSIYFNKIYEG-VFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPErLQA 140
Cdd:PRK07691 82 LVLTSS-IITFLVILYSFQTIGIERERyYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LRE 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 141 GVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNI-------DLVGSGLIS--YICLILAFLVKMPMFLVHLWLPSAHVEA 211
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAILYSVVGTLNMADIsvkiaelSAGQTGLITvvAILFLFVFATKAGLFPLYFWLPGSYYAP 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 212 PVAGSMILAGVLLKLGGYGLLRIYFMLISMGVIMNFFFISIslLGGVMISIVCL---CQSDLKALIAYSSVAHMGLVLGG 288
Cdd:PRK07691 240 PIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILI--LALLTIIFGVIgavAYFDIKKIIIYNIMIAVGVILVG 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 289 IMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPSMTmWWFLLISSSMAA-PPSLNLMGEI 367
Cdd:PRK07691 318 VAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG-WMFFIAALSLAGiPPLSGFYGKF 396
|
330 340 350
....*....|....*....|....*....|....*..
gi 1916859092 368 GLLISMVGWSWFVMFMLMLMSFLSAVYSL---YLYSF 401
Cdd:PRK07691 397 FIVEGTFEAGFYVSGIIVLLSSLLVLYSVikiFLKGF 433
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
90-399 |
5.39e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 52.08 E-value: 5.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 90 FLGLIIFLLMMLIcafISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSL 169
Cdd:COG1009 116 YLLLFMAAMLGLV---LSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 170 YMGNI-----DLVGSGLISYIC--LILAFLVKMPMFLVHLWLPSAhVEAP-------------VAGSMILAgvllklggy 229
Cdd:COG1009 193 NFSELlaaapTILSSPLLTLILllLLLGAFGKSAQFPLHFWLPDA-MEGPtpvsallhaatmvKAGVYLLA--------- 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 230 gllRIYFMLISMGVIMNFFFI--SISLLGGVMISIVclcQSDLKALIAYSSVAHMGLVLGGIMTMnnwGLMSSYTLMLAH 307
Cdd:COG1009 263 ---RLSPLFALSPVWLTVVAIigAITALFAALIALA---QTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTH 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 308 GLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPsMTMWWFLLISSSMAAPPSLN------LMgeIGLLISMVGWSWFVM 381
Cdd:COG1009 334 AFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMP-ITAITFLIGALSLAGIPPFAgffskeAI--LEAALEAGGLGPLLL 410
|
330
....*....|....*...
gi 1916859092 382 FMLMLMSFLSAVYSLYLY 399
Cdd:COG1009 411 AVALLGAFLTAFYSFRLF 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
90-396 |
6.95e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.49 E-value: 6.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 90 FLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILgWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSL 169
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 170 YMGNI-----DLVGSGLISYIC--LILAFLVKMPMFLVHlWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLI--- 239
Cdd:PRK12663 189 NMAHIamrlnDMGDTATLTTIAllFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFpqe 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 240 -SMGVIMNFFFISISLLGGVMISIVclcQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLA 318
Cdd:PRK12663 268 rELLHPLLATMAAITMVIGALGALA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIA 344
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859092 319 NISYERMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSL 396
Cdd:PRK12663 345 GSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-214 |
9.51e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 51.00 E-value: 9.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 90 FLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGwGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSL 169
Cdd:PRK12666 111 FHALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYGLLLH-GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTL 189
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916859092 170 YMGNIDL--------------VGSGLisyicLILAFLVKMPMFLVHLWLPSAHVEA--PVA 214
Cdd:PRK12666 190 NMADLAQriaqlpaadralleAGAAL-----LLVVFLIKAAMWPLNFWLPPAYAAAsaPVA 245
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
94-398 |
1.04e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 50.92 E-value: 1.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 94 IIFLLMMLICAFISL--DYFSFYIFFEGSLIPTILLIlGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYM 171
Cdd:PRK08377 112 MLFLLLMLGATGMIAtgDIFNLFVFMEITAITAYALT-AYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 172 GNIDLVGSGL------ISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVIM 245
Cdd:PRK08377 191 AHIAQLAGTIdptvaqVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 246 NF--FFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYE 323
Cdd:PRK08377 271 SVlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859092 324 RMGSRSLLVNKGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMV--GWSWFVMFMLMlMSFLSAVYSLYL 398
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLsaGYTWPVALVLG-ASVVEAVYYFRL 426
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
188-396 |
9.37e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 48.12 E-value: 9.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 188 ILAFLV------KMPMFLVHLWLPSAHVEA-PV-----AGSMILAGvllklggygllrIYFMLISMGV-----IMNFFFI 250
Cdd:PRK12650 209 VVAVLIavaaftKSAQFPFHFWLPEAMAAItPVsaflhAAAVVKAG------------IYLLLRFSPVfhdvaVWNWLLI 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 251 SISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSL 330
Cdd:PRK12650 277 IVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDI 356
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859092 331 LVNKGLMSFMPsMTMWWFLLISSSMAA-PPSLNLMGEIGLLISMV---GWSWFVMFMLM---LMSFLSAVYSL 396
Cdd:PRK12650 357 RRLGSLWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFLeapGGNAGVVLLLVgaaLGAVFTFAYSA 428
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
41-396 |
1.05e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 47.80 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 41 IFTGGFSKISYFGGM---DNLGFGLILLSIWICGL-MIMSSSSIYFNKIYEGVFLGLIIFLL--MMLICAFISLdyFSFY 114
Cdd:COG1007 51 LLALGGGTGTAFGGMfvvDGFALFFKLLILLAALLvLLLSRDYLERRGLLRGEFYALLLFATlgMMLMASANDL--LTLF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 115 IFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVGSGLISY-------ICL 187
Cdd:COG1007 129 LGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGANspllllgLVL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 188 ILA-FLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRI-YFMLISMGVIMNFFFISISLLGGVMISIVCL 265
Cdd:COG1007 209 VLAgLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLlVEAFPGLAADWQLLLAVLAVLSMTVGNLAAL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 266 CQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMF-CLANISYERMGSRSLLVNKGLMSFMPSMT 344
Cdd:COG1007 289 AQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLA 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859092 345 mwWFLLISS-SMA-APPSLNLMGEIGLLISMV--GWSWFVMFMLmLMSFLSAVYSL 396
Cdd:COG1007 369 --LAMTIFLlSLAgIPPTAGFFGKFYVFSAAVeaGLYWLAVIAV-LNSVISAYYYL 421
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
109-289 |
1.37e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 47.58 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 109 DYFSFYIFFEGSLIPTILLILGWGyQPERLQAGV-YLMFYTLFASMpLLVGLFYIYKMSGSLYMGNIDlvGSGLISYICL 187
Cdd:PRK12668 114 DLLTLFVFWELMAFTSTFLVWARG-TKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFGAIA--GLGGTAAWLI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 188 ILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIY---FMLISMGVIMNFFFISISLLggvmisivc 264
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFpgtELLIYIGAAMAVYGVFFALL--------- 260
|
170 180
....*....|....*....|....*
gi 1916859092 265 lcQSDLKALIAYSSVAHMGLVLGGI 289
Cdd:PRK12668 261 --ENDLRRLLSYHIVSQVGYMVAGI 283
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-401 |
1.62e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 47.12 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 55 MDNLG--FGLILLSIWICGLMIMSSSSIYFNKIYEGVFLGLIIFLLMMLICAFISLDYFSFYIFFEGSLIPTILLIlGWG 132
Cdd:PRK06589 81 LEPLGliFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHT 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 133 YQPERLQAGV-YLMFYTLFASMPLLVGLFYIYKMSGSLymgniDLVGSGLIS---YICLILAF---LVKMPMFLVHLWLP 205
Cdd:PRK06589 160 RNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNL-----DFVSGGLFSknqSIILLLMFiygIAKTAIFPVHSWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 206 SAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMGVIMNFF-----FISISLLGGVMISIVCLCQSDLKALIAYSSVA 280
Cdd:PRK06589 235 AAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSSLKALKTDNIKKILAYSTIS 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 281 HMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPsMTMWWFLLISSSMAAPPS 360
Cdd:PRK06589 315 QLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFP-LISFIISISSLSLIGIPI 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1916859092 361 LN------LMGEIGLLISMVGWSWFVMFMLMLMSFLSAVYSLYLYSF 401
Cdd:PRK06589 394 FSgfiskfLILLAASEQNQPWLSIIVMLVVIASSILSALYLLKILSS 440
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
96-387 |
2.24e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.18 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 96 FLLMMLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNID 175
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 176 LVG---------SGLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLggygllrIYFMLISMGVIMN 246
Cdd:MTH00196 81 LVLnsgqsfssvSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 247 FFFISIsLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSsgmFCLANISYERMG 326
Cdd:MTH00196 154 ILLIGG-LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMS---ICVFSIILALNV 229
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1916859092 327 SRSLLVN-KGLMSFMPSMTMWWFLLISSSMAAPPSLNLMGEIGLLISMVGWSWFVMFMLMLM 387
Cdd:MTH00196 230 YKNLIIEfSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVF 291
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
165-315 |
4.71e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 45.62 E-value: 4.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 165 MSGSLYMGNIDLvGSGLISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKlggygllrIYFMLISMGVI 244
Cdd:MTH00198 284 LSATLETTNIEL-RQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--------TVYILLTSLVI 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916859092 245 MNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMF 315
Cdd:MTH00198 355 TSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
150-315 |
1.48e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.04 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 150 FASMPLLVGLFYIYKMSGSLYMGNIDLVGSGLISYICLILAFLV--------KMPMFLVHLWLPSAHVEAPVAGSMILAG 221
Cdd:PRK05777 165 LASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLVfllvglafKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 222 VLLKLGGYGLLRIYFMLI-SMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSS 300
Cdd:PRK05777 245 APKIAAFAVLLRLLVVAFgGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAV 324
|
170
....*....|....*
gi 1916859092 301 YTLMLAHGLCSSGMF 315
Cdd:PRK05777 325 LFYLLAYLFMTLGAF 339
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
88-362 |
1.21e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 41.41 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 88 GVFLGLIIFLLMMLIcafISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSG 167
Cdd:PRK06521 116 GFFYNLFLASMVLVL---LADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 168 SLYMGNI-DLVGSGLISYICLILAFL---VKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISM-- 241
Cdd:PRK06521 193 SYDFAAMrAAHLSPFWASLVFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGApg 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 242 ---GVIMnFFFISISLLGGVMISIVclcQSDLKALIAYSSVAHMGLVLGGI-----------MTMNNWGLMSSYTLMLAH 307
Cdd:PRK06521 273 wwwGVLV-LALGAISAVLGVLYALA---EHDLKRLLAYSTIENIGIIFVGLglamvfiaygmPLLAALALTAALYHLLNH 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1916859092 308 GLCSSGMFCLANISYERMGSRSLLVNKGLMSFMPsMTMWWFLLISSSMAAPPSLN 362
Cdd:PRK06521 349 ALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMP-WTAWAFLIGCLAISALPPLN 402
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
20-315 |
5.90e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 38.78 E-value: 5.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 20 LSWWIIQSLFFFMGGLLVFNFIFTGGFSKISyFGGMDNLGFGLILLSIWICglMIMSSSSIYFNKIYEGVFLGLIIFLLM 99
Cdd:TIGR01770 37 LSYIVLLSALVSLFLTLQYAAYLFTGFSFFI-VDNFALLIKLILLLSTLLT--FFFALSYLSKEKINKFEFYILLLFALL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 100 MLICAFISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSLYMGNIDLVGS 179
Cdd:TIGR01770 114 GIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLS 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 180 G--------LISYICLILAFLVKMPMFLVHLWLPSAHVEAPVAGSMILAGVLLKLGGYGLLRIYFMLISMG--VIMNFFF 249
Cdd:TIGR01770 194 NgmlnisllLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFseAWQIFLA 273
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859092 250 IsISLLGGVMISIVCLCQSDLKALIAYSSVAHMGLVLGGIMTMNNWGLMSSYTLMLAHGLCSSGMF 315
Cdd:TIGR01770 274 I-IAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
90-297 |
8.32e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 38.40 E-value: 8.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 90 FLGLIIFLLMMLIcafISLDYFSFYIFFEGSLIPTILLILGWGYQPERLQAGVYLMFYTLFASMPLLVGLFYIYKMSGSL 169
Cdd:MTH00032 116 YLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859092 170 YMG--NIDLVGSGLISY-------------------ICLILAFLVKMPMFLVHLWLPSAhVEAPVAGSMILAGVLLKLGG 228
Cdd:MTH00032 193 DFLtfNGGSVGSGIMDRgyygggayesplapfaiigILLLIGCIGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAG 271
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916859092 229 YGLLRIYFMLISMGVIMNFFFISISLLGGVMISIVCLCQSDLKALIAYSSVAHMG--LVLGGIMTMNNWGL 297
Cdd:MTH00032 272 VFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGymVLIIGIEGSHNVGL 342
|
|
| |
