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Conserved domains on  [gi|1916859117|gb|QOL00874|]
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NADH dehydrogenase subunit 3 [Sinophlaeoba bannaensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.30e-41

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 133.06  E-value: 1.30e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIATILSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916859117  81 LKTSNIMMWTISTMIFILILLMGLYYEWNQGALKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.30e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 133.06  E-value: 1.30e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIATILSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916859117  81 LKTSNIMMWTISTMIFILILLMGLYYEWNQGALKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 9.51e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 104.81  E-value: 9.51e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  19 MTIATILSKKSINdREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILKtSNIMMWTISTMIFIL 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1916859117  99 ILLMGLYYEWNQGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 10-115 4.43e-27

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 96.34  E-value: 4.43e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  10 ISFILPMLVMTIATILSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILKTSNIMMW 89
Cdd:COG0838    14 VALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGL 92

                          90       100
                  ....*....|....*....|....*.
gi 1916859117  90 tISTMIFILILLMGLYYEWNQGALKW 115
Cdd:COG0838    93 -IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.30e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 133.06  E-value: 1.30e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIATILSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916859117  81 LKTSNIMMWTISTMIFILILLMGLYYEWNQGALKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 4.19e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 129.13  E-value: 4.19e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   3 ILMTSISISFILPMLVMTIATILSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1916859117  83 TSNIMMWTISTMIFILILLMGLYYEWNQGALKW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 1.47e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 125.49  E-value: 1.47e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIATILSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916859117  81 LKTSNIMMWTISTMIFILILLMGLYYEWNQGALKWA 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 5.23e-34

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 113.80  E-value: 5.23e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIATILSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916859117  81 LKTSNIMMWTISTMIFILILLMGLYYEWNQGALKWA 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 2-116 5.14e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 108.87  E-value: 5.14e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   2 MILMTSISISFILPMLVMTIATILSKKSINdREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIL 81
Cdd:MTH00106    1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916859117  82 KTSNIMMWTISTMIFILILLMGLYYEWNQGALKWA 116
Cdd:MTH00106   80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-116 7.09e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 105.73  E-value: 7.09e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   2 MILMTSISISFILPMLVMTIATILSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIL 81
Cdd:MTH00113    1 MNLISMLTISLALSTILTTLNFWLTQTK-PDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAI 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916859117  82 KTSNIMMWTISTMIFILILLMGLYYEWNQGALKWA 116
Cdd:MTH00113   80 NLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 9.51e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 104.81  E-value: 9.51e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  19 MTIATILSKKSINdREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILKtSNIMMWTISTMIFIL 98
Cdd:pfam00507   1 LLLSRLLGPKRPN-PEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1916859117  99 ILLMGLYYEWNQGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 2.06e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 102.30  E-value: 2.06e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIATILSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMT-PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1916859117  81 LKTSNIMMWTISTMIFILILLMGLYYEWNQGALKWA 116
Cdd:MTH00136   80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWA 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 2.93e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 99.29  E-value: 2.93e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIATILSKKSInDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1916859117  81 LKTSNIMMWTISTMIFILILLMGLYYEWNQGALKWAN 117
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 10-115 4.43e-27

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 96.34  E-value: 4.43e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  10 ISFILPMLVMTIATILSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILKTSNIMMW 89
Cdd:COG0838    14 VALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWFGL 92

                          90       100
                  ....*....|....*....|....*.
gi 1916859117  90 tISTMIFILILLMGLYYEWNQGALKW 115
Cdd:COG0838    93 -IEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-116 6.14e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 95.83  E-value: 6.14e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIATILSkksinDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPI--- 77
Cdd:MTH00069    3 MLMLLISTILSLILITISFWLPLNNP-----DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwa 77

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1916859117  78 VIILKTSNIMMWtiSTMIFILiLLMGLYYEWNQGALKWA 116
Cdd:MTH00069   78 SQLNTPTNTLFW--STLILIL-LTLGLIYEWIQGGLEWA 113
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 1.59e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 94.58  E-value: 1.59e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIAtILSKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFIA-FWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916859117  81 LKTSNimMWTISTMIFILILLMGLYYEWNQGALKW 115
Cdd:MTH00203   80 NQLSS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 10-116 9.17e-26

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 93.00  E-value: 9.17e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  10 ISFILPMLVMTIATILSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILKTSNiMMW 89
Cdd:PRK06602   17 VAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIG-WLG 94

                          90       100
                  ....*....|....*....|....*..
gi 1916859117  90 TISTMIFILILLMGLYYEWNQGALKWA 116
Cdd:PRK06602   95 FVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-115 2.48e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 78.95  E-value: 2.48e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   8 ISISFILPMLVMTIATILSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILP-IVIILKTSNI 86
Cdd:MTH00018    7 LIFSVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPwCVLYNQIAPF 85

                          90       100
                  ....*....|....*....|....*....
gi 1916859117  87 MMWTIstMIFILILLMGLYYEWNQGALKW 115
Cdd:MTH00018   86 GFWTM--VGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 12-115 3.91e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 73.59  E-value: 3.91e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  12 FILPMLVMTIATILSKKS------INDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILKTSN 85
Cdd:MTH00055    9 FILLLFSIGLSTVISGASyivgvkQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIG 88

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1916859117  86 IM-MWTIstMIFILILLMGLYYEWNQGALKW 115
Cdd:MTH00055   89 LFgFWVM--YLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 4.76e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 68.42  E-value: 4.76e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  32 DREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILKTSNIM-MWTISTmiFILILLMGLYYEWNQ 110
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFsFWIVYT--FLIVLAIGLAYEWIK 117


                  ....*
gi 1916859117 111 GALKW 115
Cdd:MTH00030  118 GGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 10-115 5.31e-13

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 60.39  E-value: 5.31e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  10 ISFILPMLVMTIATILSKKSINDrEKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILKTSNIMMW 89
Cdd:CHL00022   16 ISSLIPILAFLISGLLAPISKGP-EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAF 94

                          90       100
                  ....*....|....*....|....*.
gi 1916859117  90 tISTMIFILILLMGLYYEWNQGALKW 115
Cdd:CHL00022   95 -IEALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
2-115 2.39e-11

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 56.29  E-value: 2.39e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   2 MILMTSISISFILPMLVMTIATILSKKSINDrEKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIIL 81
Cdd:PRK07756   10 MIVLIFLLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAY 88

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1916859117  82 KTSNIMMwTISTMIFILILLMGLYYEWNQGALKW 115
Cdd:PRK07756   89 DKLGLFA-LIEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
10-115 1.07e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 54.67  E-value: 1.07e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  10 ISFILPMLVMTIATILSKKSIN---DREKSSPFECGFDP-KSSARMpfSIQFFLIAVIFLIFDVEIALILPIVIILKTSN 85
Cdd:PRK08489   19 LTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPvKQPNRI--SSHFYIMALLFILFDVEIVFMFPWAVDFKLLG 96

                          90       100       110
                  ....*....|....*....|....*....|
gi 1916859117  86 IMMWtISTMIFILILLMGLYYEWNQGALKW 115
Cdd:PRK08489   97 LFGL-IEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-115 2.83e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 48.13  E-value: 2.83e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  19 MTIATILSKKSINdREKSSPFECGFDPKSSARMP--FSIQFFLIAVIFLIFDVEIALILPIVIILKTSNIMMwTISTMIF 96
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFG-LVEMALF 99

                          90
                  ....*....|....*....
gi 1916859117  97 ILILLMGLYYEWNQGALKW 115
Cdd:PRK07928  100 MLTVFVAYAYVWRRGGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 1.93e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 42.96  E-value: 1.93e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   1 MMILMTSISISFILPMLVMTIATILSKKSiNDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVII 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1916859117  81 LKTSNIMMWTIstMIFIlilLMGLYYEWNQGALKW 115
Cdd:MTH00092   80 DFSSLISFFML--MIFI---FFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 2-117 2.98e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 42.58  E-value: 2.98e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117   2 MILMTSISISFILPMLVMTIATIL---SKKSINDREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIV 78
Cdd:MTH00060    1 MLVLLFVFFVFFLLFLVIYFFHSGlwnNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1916859117  79 I-ILKTSNImmwtISTMIFILILLMGLYYEWNQGALKWAN 117
Cdd:MTH00060   81 FqGLLFYNF----WYYYFFLLLLFLGFVVELFSGYVRWVY 116
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 3.76e-06

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 42.88  E-value: 3.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859117  32 DREKSSPFECGFDPKSSARMPFSIQFFLIAVIFLIFDVEIALILPIVIILKTSNIMMWtISTMIFILILLMGLYYEWNQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 1916859117 112 ALKW 115
Cdd:PRK06432  139 YMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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