|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
2.16e-168 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 480.42 E-value: 2.16e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 1 MLKYLFMIGFLIPICLLGNCWWLVHSLMFLLSFVFMFSVYSYADLNMIGYFFGIDYFSFMLILLSFWICSLMITASSSIY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 81 LYSYHSNFFIFLVLLLLITLYCSFSSLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFK 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 161 INSVFNTLYFPLLFDCGSFYFMFYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISC 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 241 LGLCFNYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNI 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 321 IYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1916859119 401 YSQHGFYYSGIYTCSLGYLREYHLLFLHWFPLNILCLKGEYFYY 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFML 444
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
31-442 |
5.96e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 348.37 E-value: 5.96e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 31 LSFVFMFSVYSYADlnMIGYFFGIDYFSFMLILLSFWICSLMITASSSIYLYSYHSNFFIFLVLLLLITLYCSFSSLSLL 110
Cdd:MTH00150 1 LSLLLLYSSFSSYE--SLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 111 SFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLLFDCGSFYFM---FYVFS 187
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSmglWGLLV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 188 MFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGLCFNYFWLSLSLFGGAVISFICFRQ 267
Cdd:MTH00150 159 FLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQ 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 268 VDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFWW 347
Cdd:MTH00150 239 SDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWW 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 348 FLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMYSYSQHGFYYSGIYTCSLGYLREYHLLFL 427
Cdd:MTH00150 319 FLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLL 398
|
410
....*....|....*
gi 1916859119 428 HWFPLNILCLKGEYF 442
Cdd:MTH00150 399 HWVPLLLLILKSDLL 413
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-440 |
2.45e-116 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 348.27 E-value: 2.45e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 1 MLKYLFMIGFLIPICLLGNCWWLVHS---LMFLLSFVFMFSVYSYADLNMIGYFFGIDYFSFMLILLSFWICSLMITASS 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 78 SIYLYSYHSNFFIFLVLLLLITLYCSFSSLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLV 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 158 LFKINSVFNTLYFPLL---FDCGSFYFMFYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRI 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSsmePPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 235 MSVISCLGLCFNYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 315 FCLSNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1916859119 395 TLYMYSYSQHGFYYSGIYTCSLGYLREYHLLFLHWFPLNILCLKGE 440
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-443 |
2.01e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 332.71 E-value: 2.01e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 2 LKYLFMIGFLIPICLLGNCWW--LVHSLMFLLSFVFMFSVYSYADLNMIGYFFGIDYFSFMLILLSFWICSLMITASSSI 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWsfFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 80 YLYSYHSNFFIFLVLLLLITLYCSFSSLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 160 KINSVFNTLYFPLLFDCGSFYFM---FYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMS 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYlflYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 237 VISCLGLCFNYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 317 LSNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1916859119 397 YMYSYSQHGFYYSGIYTCSLGYLREYHLLFLHWFPLNILCLKGEYFY 443
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
2.18e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 327.92 E-value: 2.18e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 1 MLKYLFMIGFLIPICLLGNC---WWLVHSLMFLLSFV-FMFSVYSYADLNMIGYFFGIDYFSFMLILLSFWICSLMITAS 76
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPkflWTNTTTYSLLIALLsLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 77 SSIYLYSYHSN--FFIFLVLLLLITLYCSFSSLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPL 154
Cdd:MTH00124 81 QNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 155 LLVLFKINSVFNTLYFPLLFDCGSF------YFMFYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGG 228
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTltnswtNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 229 YGIFRIMSVISCLGLCFNYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHG 308
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 309 LCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLS 388
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1916859119 389 FFSAVYTLYMYSYSQHGFYYSGIYTCSLGYLREYHLLFLHWFPLNILCLKGE 440
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPE 452
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
1.88e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 312.62 E-value: 1.88e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 1 MLKYLFMIGFLIPICLLGNCWWL-----VHSLMFLLSFVFMFSvYSYADLNMIGYFFGIDYFSFMLILLSFWICSLMITA 75
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLwtlttTNSLIIAFLSLMWFN-LPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 76 SSS-------IYLYSYHSNFFIFLVLLLLITLycsfsSLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTL 148
Cdd:MTH00068 80 SQNhlknepiNRQRTYISMLIILQLTLILAFS-----ATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 149 VASLPLLLVLFKINSVFNTLYFPLLFDCGSFYFM------FYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGV 222
Cdd:MTH00068 155 AGSLPLLIALLILQNSLGSLSLILLELMSPMQLMtytnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAV 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 223 LLKLGGYGIFRIMSVISCLGLCFNYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLS 302
Cdd:MTH00068 235 LLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAII 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 303 LMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFL 382
Cdd:MTH00068 315 LMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTIL 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859119 383 VLIFLSFFSAVYTLYMYSYSQHGFYYSGIYTCSLGYLREYHLLFLHWFPLNILCLKGE 440
Cdd:MTH00068 395 ITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPE 452
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
26-432 |
2.49e-99 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 304.59 E-value: 2.49e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 26 SLMFLLSFvFMFSVYSYADLNMIGYFFGIDYFSFMLILLSFWICSLMITASSSIYLYSYHSN--FFIFLVLLLLITLYCS 103
Cdd:MTH00044 32 SLISLLSL-FLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNqrTFISLIIIILTALIIT 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 104 FSSLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLLFDC------G 177
Cdd:MTH00044 111 FSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNwltslsS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 178 SFYFMFYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGLCF-NYFWLSLSLFG 256
Cdd:MTH00044 191 NSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNiSFILIVFCCWG 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 257 GAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 336
Cdd:MTH00044 271 ALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGF 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 337 INLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMYSYSQHGFYYSGIYTCSL 416
Cdd:MTH00044 351 KLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSP 430
|
410
....*....|....*.
gi 1916859119 417 GYLREYHLLFLHWFPL 432
Cdd:MTH00044 431 ISSREHLLIFLHLLPL 446
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
4.64e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 296.42 E-value: 4.64e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 1 MLKYLFMIGFLIPICLLGNCWWL-----VHSLMFLLSFVFMFSVYSYADLNMIGYFFgIDYFSFMLILLSFWICSLMITA 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIwinttTYSLLISLISLLLLNQPNDNSLNFSLLFF-SDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 76 SSSiYLYS---YHSNFFIFLVLLLLITLYCSFSSLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASL 152
Cdd:MTH00110 80 SQH-HLSKeplTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSL 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 153 PLLLVLFKI-------NSVFNTLYFPLLFDCGSFYFMFYVfSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLK 225
Cdd:MTH00110 159 PLLVALLYIqnnlgslNFLLLQLWAQPLPNSWSNNLLWLA-CMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLK 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 226 LGGYGIFRIMSVISCLGLCFNYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMV 305
Cdd:MTH00110 238 LGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 306 GHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLI 385
Cdd:MTH00110 318 AHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMG 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1916859119 386 FLSFFSAVYTLYMYSYSQHGFYYSGIYTCSLGYLREYHLLFLHWFPLNILCL 437
Cdd:MTH00110 398 LNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSL 449
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
5-432 |
9.53e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 292.61 E-value: 9.53e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 5 LFMIGFLIPICLLGNCWWLVHSLMFLLSFVFMFSVYSYADLNMIG--YFFGIDYFSFMLILLSFWICSLMITASSSIYLY 82
Cdd:MTH00206 6 LIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFsnLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 83 SYHSN--FFIFLVLLLLITLYCSFSSLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFK 160
Cdd:MTH00206 86 EPINRqrIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLF 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 161 INSVFNTLYFPLL---FDCGSFYFMFYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSV 237
Cdd:MTH00206 166 LQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILI 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 238 ISCLGLCFNYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCL 317
Cdd:MTH00206 246 LGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 318 SNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLY 397
Cdd:MTH00206 326 ANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLY 405
|
410 420 430
....*....|....*....|....*....|....*
gi 1916859119 398 MYSYSQHGFYYSGIYTCSLGYLREYHLLFLHWFPL 432
Cdd:MTH00206 406 MFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPV 440
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-440 |
5.94e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 267.59 E-value: 5.94e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 1 MLKYLFMIGFLIPICLLGNCWWL-----VHSLMFLLSFVFMFSVYSYADLNMIGYFFGIDYFSFMLILLSFWICSLMITA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLwtttlAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 76 SSSIYLYSYHSNFFIFLVLLLLITLYCSFSSLS--LLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLP 153
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGAteIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 154 LLLVLFKINSVFNTL------YFPLLFDCGSFYFMFYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLG 227
Cdd:MTH00127 161 LLVALLLLQNSTGTLsmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 228 GYGIFRIMSVISCLGLCFNYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGH 307
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 308 GLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFL 387
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1916859119 388 SFFSAVYTLYMYSYSQHGFYYSGIYTCSLGYLREYHLLFLHWFPLNILCLKGE 440
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPE 453
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
113-399 |
1.53e-57 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 196.84 E-value: 1.53e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYqPERLQAGIYLIFYTLVASLPLL---LVLFKINSVFNTLYFPLL---FDCGSFYFMFYVF 186
Cdd:COG1008 137 YVFWELMLIPMYFLIGIWGG-ERRIYAAIKFFLYTLAGSLLMLvaiLALYFLAGALTFDIAELAaapLPLTAQLLLFLAF 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 187 sMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRImsvisCLGLC------FNYFWLSLSLFGGAVI 260
Cdd:COG1008 216 -FIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRF-----ALPLFpeasayFAPLLAALGVIGIIYG 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 261 SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLM 340
Cdd:COG1008 290 ALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRM 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859119 341 PTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMY 399
Cdd:COG1008 370 PVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-388 |
6.12e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 179.05 E-value: 6.12e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLLF------DCGSFYFMFYVF 186
Cdd:pfam00361 8 YLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltggLNSSGLLLLFLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 187 SMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGLCFNYFWLSLSLFGGAVISFICFR 266
Cdd:pfam00361 88 ILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLLGSLAALV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLS-NIIYERLGSRSLLINKGMINLMPTMSF 345
Cdd:pfam00361 168 QTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKTMPILAL 247
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1916859119 346 WWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLS 388
Cdd:pfam00361 248 VFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
113-399 |
1.02e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 176.02 E-value: 1.02e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTL-YFPLLFDCGSFYFMFYVFSMF-- 189
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQILLNIKLPLSIQKWLLVGFfl 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 190 AFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVIscLGLCFNYFWLSLSLFGGAVI---SFICFR 266
Cdd:MTH00204 218 SLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPL--FPAASEYFAPLIVMLSVIAViygSLTTCR 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFW 346
Cdd:MTH00204 296 QVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVII 375
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1916859119 347 WFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMY 399
Cdd:MTH00204 376 MLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
113-399 |
1.11e-49 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 176.16 E-value: 1.11e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYqPERLQAGIYLIFYTLVASLPLLLVLFkinsvfnTLYFPLLFDCGSF------------- 179
Cdd:PRK05846 137 YVFFEAMLIPMYFLIGVWGG-KNRIYAATKFFLYTLLGSLLMLVAII-------YLVVVYYNATGTFdiadllnlplppg 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 180 --YFMFYVFsMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRImsvisCLGLC------FNYFWLS 251
Cdd:PRK05846 209 vqYWLFLAF-FIAFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRF-----SLPLFpdasheFAPIIIT 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 252 LSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLL 331
Cdd:PRK05846 283 LGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIA 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859119 332 INKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMY 399
Cdd:PRK05846 363 DYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
113-399 |
1.93e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 172.54 E-value: 1.93e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPtLFLILG-WGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLL----FDCGSFYFMFYVFs 187
Cdd:MTH00217 135 YILFEGILIP-MFLIIGiWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALcclkIEKELQYFIFLGF- 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 188 MFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRI-MSVISCLGLCFNYFWLSLSLFGGAVISFICFR 266
Cdd:MTH00217 213 FLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCR 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFW 346
Cdd:MTH00217 293 QVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGIL 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1916859119 347 WFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMY 399
Cdd:MTH00217 373 MLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
113-399 |
4.90e-46 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 165.88 E-value: 4.90e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGyQPERLQAGIYLIFYTLVASLPLLLVL----FKINSVFN-TLYFPLLFDCGSFYFMFYVFs 187
Cdd:TIGR01972 132 YVFWEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAIlglyFLGGGTFDlLELLNLPLPFGVQTWLFLAF- 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 188 MFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRI-MSVISCLGLCFNYFWLSLSLFGGAVISFICFR 266
Cdd:TIGR01972 210 FIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 267 QVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFW 346
Cdd:TIGR01972 290 QTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAF 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1916859119 347 WFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMY 399
Cdd:TIGR01972 370 FMLFAMASLGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-397 |
6.00e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 166.25 E-value: 6.00e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 52 FGIDYFSFMLILLSFWI--CSLMITASSSIYLysyhSNFFIFLVLLLLITLYCSFSSLSLLSFYIFFESSLVPtLFLILG 129
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILISWHSVKYL----TKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIP-MYLILG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 130 -WGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLLFDC-----GSFYFMFYVFSMFAFLVKMPMFLFHLW 203
Cdd:MTH00226 173 iWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCshvvsEQTQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 204 LPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGL-CFNYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHM 282
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAqNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 283 SMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLN 362
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350
....*....|....*....|....*....|....*
gi 1916859119 363 LIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLY 397
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-418 |
1.14e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 149.67 E-value: 1.14e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 19 NCWWLVHSLMFLLsFVFMFSVYSYADLNMIGYFFGIDYFSFMLILLSFWICSLMITASSSIYLYSYHSNFFIFLVlllli 98
Cdd:MTH00094 2 SLLFFFSPFLFFL-FLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILIC----- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 99 tlYCSFSSLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLLFDCGS 178
Cdd:MTH00094 76 --LLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSWEM 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 179 FYFMfyvfsMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSvisCLGLCFNYFWLSLSLFGGA 258
Cdd:MTH00094 154 FFIL-----SLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILG---SLNFVYNNFWIIFSLLGMI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 259 VISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:MTH00094 226 LSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 339 LMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMYSYSQHGFYYSGIYTCSLGY 418
Cdd:MTH00094 306 SSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGL 385
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
113-403 |
7.22e-29 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 117.56 E-value: 7.22e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYqPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLL------FDCGSFYFMFyVF 186
Cdd:COG0651 133 FVFFEVMLLASYGLVALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaeLDPGLLLAAF-AL 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 187 SMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVI--SCLGLCFNYFWLSLSLFGGAVISFIC 264
Cdd:COG0651 211 LLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 265 FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMS 344
Cdd:COG0651 291 LAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTA 370
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 345 FWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFL-SFFSAVYTLYMYSYSQ 403
Cdd:COG0651 371 AAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLsSLLTLAYFVRIFGRAQ 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
113-407 |
9.89e-29 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 118.21 E-value: 9.89e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLL-----LVLFKINSVFNTLYFPLLFDCGSFYFMFYVFS 187
Cdd:PRK12561 113 FLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILvaglaLALSGDTFTFDLAELGAKSYPLALELLLYAGF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 188 MFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMsvISCLGLCFNYFWLSLSLFGGAVI---SFIC 264
Cdd:PRK12561 192 LIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFN--VQMLPDAHVYFAPALAILGVVNIiygALNA 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 265 FRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTmS 344
Cdd:PRK12561 270 FAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPK-T 348
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859119 345 FWWFLLSS-SNMAAPPSLNLIGEFSLLNSIIS---WSPFMFLVLIFLSFFSAVYT-LYMYSYSQHGFY 407
Cdd:PRK12561 349 FALFTASSmASLALPGMSGFVSELTVFLGITSsdvYSSTFRTITILLAAVGLILTpIYLLSMLRRVFY 416
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
113-398 |
4.78e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 98.23 E-value: 4.78e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLL---LVLFKINSVFNTLYFPLLFDC--GSFYFMFYVFS 187
Cdd:PRK06473 133 FLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILvsfLGLVWLSGASSFDYEPLRSHTlpLSTQLLLLAPI 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 188 MFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRImsvisCLGLcFNYFWLSLS--LFGGAVISFI-- 263
Cdd:PRK06473 212 LVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRF-----GVGL-FPEAWVYLApwLATWAVVSVLyg 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 264 ---CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLM 340
Cdd:PRK06473 286 ascAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPE 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916859119 341 PTMSFWWFLLSSSNMAA---PPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYM 398
Cdd:PRK06473 366 RGLPITGSLMILGVMASagiPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLL 426
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
113-419 |
1.35e-21 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 96.94 E-value: 1.35e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLLLVLFKI---NSVFNTLYFPLLFDCG---SFYFMFYVF 186
Cdd:CHL00011 138 FIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMglyGSNEPTLNFETLANQSypvALEILFYIG 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 187 SMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMsvISCLGLCFNYFWLSLSLFGGAVI---SFI 263
Cdd:CHL00011 217 FLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRIN--MELLPHAHSIFSPWLVIVGAIQIiyaAST 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTM 343
Cdd:CHL00011 295 SLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKI 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 344 SFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTL----YMYSYSQHGFYYSGIYTCSLGYL 419
Cdd:CHL00011 375 FTMFSSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAIGMIltpiYLLSMLRQMFYGYKLFNVPNSYF 454
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
26-419 |
6.04e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 94.22 E-value: 6.04e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 26 SLMFLLSFVFMFSVYSYADLNMIGYFFGIDYFSFMLILLSfwicsLMITASSSIYLYSYHSNFFIFLVLLLLITLYCSFS 105
Cdd:MTH00062 15 LLLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLILLV-----LFLGLYSQVMFYNLLSGVSRFFLFLSLIFSILCFC 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 106 SLSLLSFYIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLLFDCGSFYFMFYV 185
Cdd:MTH00062 90 VNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIVYY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 186 FSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGLcfnYFWLSLSLFGGAVISFICF 265
Cdd:MTH00062 170 VLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLCCLFSVFFLITAC 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 266 RQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSF 345
Cdd:MTH00062 247 SELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRV 326
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859119 346 WWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMYSYSQHGFYYSGIYTCSLGYL 419
Cdd:MTH00062 327 IVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLVPLILLGHLLIRSESYESINVSNYSYL 400
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
113-358 |
1.78e-20 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 93.62 E-value: 1.78e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLL------FDCGsFYFMFYVF 186
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTalaakdFGLG-FQLLCYAG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 187 SMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRiMSViSCLGLCFNYFWLSLSLFGGAVI---SFI 263
Cdd:PRK02546 219 LLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLR-MNA-GMLPDAHAQFAPLLIVLGVVNIiyaALT 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTM 343
Cdd:PRK02546 297 SFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKM 376
|
250
....*....|....*
gi 1916859119 344 SFWWFLLSSSNMAAP 358
Cdd:PRK02546 377 FAMWTACSLASLALP 391
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-401 |
4.59e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 86.09 E-value: 4.59e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLIlGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLLfdCGSFYFMFYVFSMFAFL 192
Cdd:PRK08375 132 FVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADL--AGALAENPTVVTAFGFV 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 193 V-----KMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGLCFNYFWLS----LSLFGGAVISFI 263
Cdd:PRK08375 209 LlalalKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALGLGWllavLALLSMLVGSLA 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 264 CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTM 343
Cdd:PRK08375 289 ALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLT 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859119 344 SFWWFLLSSSNMAAPPSLNLIGEFSLLNSIIS-WSPFMFLVLIFLSFFSAVYTLYMYSY 401
Cdd:PRK08375 369 AAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
144-398 |
6.94e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 85.79 E-value: 6.94e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 144 IFYTLVASLPLLLVLFKINSVFNTLYFPLLFDCGSFYFMFYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVL 223
Cdd:PRK12667 186 FLYATFGTLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLV 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 224 LKLGGYGIFRIMSVISCLGLCFNYFWLSLS-------LFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWG 296
Cdd:PRK12667 266 VNVGAYAIIRFLYTIFGISPSLIDFRAALSpiliilgAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLG 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 297 CMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISW 376
Cdd:PRK12667 346 LAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLES 425
|
250 260
....*....|....*....|..
gi 1916859119 377 SPFMFLVLIFLsfFSAVYTLYM 398
Cdd:PRK12667 426 GFYLPALVLLI--ASAISLVGY 445
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
184-387 |
6.29e-17 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 82.67 E-value: 6.29e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 184 YVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVIS-CLGLCF-NYFWLSLSLFGGAVIS 261
Cdd:PRK06458 217 FVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaAIGSDFpGRLLLIFGLLSVLVAA 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 262 FICFRQVDLKSLIAYSSVAHMSMV-----IGGLMtmnwwGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGM 336
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIafalgIGGPL-----GIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGL 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1916859119 337 INLMPTMSfWWFLLSSSNMA-APPSLNLIGEFSLLNSIISWSPF--MFLVLIFL 387
Cdd:PRK06458 372 LKVSPLTG-WGLMLGALAIAgMPPFGVFISEFLILTAGLARGPLliAILLLLLL 424
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
113-394 |
5.54e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 79.76 E-value: 5.54e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYQpERLQAGIYLIFYTLVASLPLL-----LVLFKINSVF-----NTLYFPLlfdcgSFYFM 182
Cdd:PRK07363 133 FLFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLaaflgIVWLSGSTSFdydaiSTQNLSL-----NTQLI 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 183 FYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRImsvisCLGLcFNYFWlSLSLFGGAVI-- 260
Cdd:PRK07363 207 LLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRF-----GLQL-FPQTW-SLVAPGLAIIgt 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 261 ------SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINK 334
Cdd:PRK07363 280 isviygALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLN 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859119 335 GMINLMPTMSFWWFLLSSSNMAA---PPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVY 394
Cdd:PRK07363 360 GLMNPIRGLPLTSALLVLAGMASagiPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY 422
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
178-399 |
1.28e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 72.48 E-value: 1.28e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 178 SFYFMFYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVI--SCLGLCFNYFWLSLSLF 255
Cdd:PRK08676 203 SVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIF 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 256 GGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKG 335
Cdd:PRK08676 283 SIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFD 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859119 336 MINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTLYMY 399
Cdd:PRK08676 363 VFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
114-393 |
9.08e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 67.06 E-value: 9.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 114 IFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLLFDCGSFYFMFYVFSMFAFLV 193
Cdd:PRK08667 138 FFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 194 KMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGLCFNYFWLSLSLFGGAVISFICFRQVDLKSL 273
Cdd:PRK08667 218 KAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGL 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 274 IAYSSVAHMSMVIGGLMTMNWWGCMGSLSLM-----------VGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPT 342
Cdd:PRK08667 298 LAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPY 377
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859119 343 MSFWWFLLSSSNMAAPPSLNLIGEFSLLNSII--------SWSPFMFLVLIFLSFFSAV 393
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYESFFqsfsvadpLIKILLFSVLAIFALTSAL 436
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
177-399 |
7.03e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 64.25 E-value: 7.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 177 GSFYFMFYVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGL-----------CF 245
Cdd:PRK08668 192 TGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLfsefgtyrgvpLF 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 246 NYFWLSLSLFGGAVISFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERL 325
Cdd:PRK08668 272 NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRT 351
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859119 326 GSRSLLINKGMINLMPtMSFWWFLLSSSNMAA-PPSLNLIGEFSLLNSIISWSpfMFLVLIFLSFFSAVYTLYMY 399
Cdd:PRK08668 352 GTTKISEMGGLIEKMP-FTFAMYLVAIISLAGiPPMSGFASKWLIFEALISKG--MPITAFMAFFGSIGSFLYVF 423
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-395 |
2.43e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.44 E-value: 2.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 186 FSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVI-----SCLGLCFNYFWLSLSLFGGAVI 260
Cdd:PRK12662 214 FIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 261 SFICFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLM 340
Cdd:PRK12662 294 SVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSM 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859119 341 PTMSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFM-FLVLIFLSFFSAVYT 395
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIgLVVLLVGSGLSVIYV 429
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
191-324 |
1.67e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 59.58 E-value: 1.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 191 FLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGLCFNYFWLSLSLFGgaviSFICFRQVDL 270
Cdd:PRK07234 194 LLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDL 269
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1916859119 271 KSLIAYSSVAHMSMVIGGLMTmnwwgcMGSLSLMvgHGLCSSGLFCLSNIIYER 324
Cdd:PRK07234 270 KRMLAFSTISQLGFILAAPLV------GGLYALA--HGLVKSTLFLCAGALPSR 315
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-82 |
2.14e-09 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 54.84 E-value: 2.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 1 MLKYLFMIGFLIPICLLGNCWWL-----VHSLMFLLSFVFMFSVYSYADLNMIGYFFGIDYFSFMLILLSFWICSLMITA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
....*..
gi 1916859119 76 SSSIYLY 82
Cdd:pfam01059 81 SQKHLKS 87
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
113-398 |
3.53e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 55.92 E-value: 3.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYQPERLQAGIYLIFYTLVASLPLL--LVLFKINSVFNTLYFPL-----LFDCGSFYFMFYV 185
Cdd:PRK12646 136 YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLvgFIMLYIMTGTNNITEILgqadhIKNHGLFIPMIFM 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 186 FSMFAFlVKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRIMSVIScLGLCFNYFWLSLSLFGGAVISFIC 264
Cdd:PRK12646 216 FLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 265 FRQVDLKSLIAYSSVAH----MSMV-IGGLMTMNWWGCMGSLSLMV---------GHGLCSSGLFCLSNIIYERLGSRSL 330
Cdd:PRK12646 293 LKQWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASIYVFVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDI 372
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859119 331 LINKGMINLMPTMSFwWFLLSSSNMAAPPSLN--LIGE--FSLLNSIISWSPFMFLVLIFL-------SFFSAVYTLYM 398
Cdd:PRK12646 373 RILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgfLSKEmfLDALTQTGQLSQFSLISMIIIvfigviaSIFTFTYALYM 450
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-398 |
8.40e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 54.33 E-value: 8.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTLFLILGWGYQPERLQAGIYlifYTLVASLPLLLVLFKINSVF---NTL---YFPLLFDCGSFYFMFYVF 186
Cdd:PRK08376 147 FVFLEIMSIASYALVAFRNDTWEAIEAGIK---YMFVGSLASSMVLLGIALLYgqyGTLnmaYLAVKMSENPTVVAKIAL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 187 SMF--AFLVKMPMFLFHLWLPKAHVEAPISGSMILagVLLKLGG-YGIFRImsvisclglCFNYFWLSLSLF--GGAVIS 261
Cdd:PRK08376 224 ALFiaGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV---------LFSIYGPAINLAtvGWVIII 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 262 FICFR----------QVDLKSLIAYSSVAH---------MSMVIGGLMTMNWWGCM---GSLSLMVGHGLCSSGLFCLSN 319
Cdd:PRK08376 293 LGCLTmfvgvamavvQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAG 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 320 IIYERLGSRSLLINKGMINLMPTMSFwWFLLSSSNMAAPPSLN------LIGEFS-LLNSIISWSPFMFLVLIFLSFFSA 392
Cdd:PRK08376 373 AVIYETGTRNLNELGGLARTMPKTTI-AFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFVKV 451
|
....*.
gi 1916859119 393 VYTLYM 398
Cdd:PRK08376 452 FHTAFF 457
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
188-394 |
2.96e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 52.46 E-value: 2.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 188 MFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGLCFNYFWLSLSLFGGAVI--SFICF 265
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFfaELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 266 RQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSF 345
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1916859119 346 WWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLI-FLSFFSAVY 394
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVlGASVVEAVY 422
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-396 |
3.54e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 52.51 E-value: 3.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 59 FMLILLSFWICSLMITASSSIYLYSYHSNFFIFLVLLLLITLYCSFSSLSLLSFYIFFESSLVPTLFLIlGWGYQPERLQ 138
Cdd:PRK06589 88 FLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI-GHTRNNISLS 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 139 AGI-YLIFYTLVASLPLLLVLFKINSVFNTLYFPllfDCGSFYFMFY--VFSMFAF-LVKMPMFLFHLWLPKAHVEAPIS 214
Cdd:PRK06589 167 GGYkYLKILMISALLLFLPAVILIYTKTGNLDFV---SGGLFSKNQSiiLLLMFIYgIAKTAIFPVHSWLPAAMVAHYPV 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 215 GSMILAGVLLKLGGYGIFRIMSVISCLGLCFNYFWLSLSLFGGAVI-----SFICFRQVDLKSLIAYSSVAHMSMVIGGL 289
Cdd:PRK06589 244 SALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLIFIPIVsifysSLKALKTDNIKKILAYSTISQLSLALLSA 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 290 MTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSFWWFLLSSSNMAAPPSLNLIGEFSL 369
Cdd:PRK06589 324 FILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLI 403
|
330 340 350
....*....|....*....|....*....|..
gi 1916859119 370 L-----NSIISWSPFMFLVLIFLSFFSAVYTL 396
Cdd:PRK06589 404 LlaaseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
184-362 |
3.64e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.58 E-value: 3.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 184 YVFSMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRImsVISCLG---LCFNYFWLSLSLFG---G 257
Cdd:PRK06521 213 FLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV--VFDLLGapgWWWGVLVLALGAISavlG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 258 AVISFIcfrQVDLKSLIAYSSVAHMSMVIGGL-MTM----NWWGCMGSLSLMVG------HGLCSSGLFCLSNIIYERLG 326
Cdd:PRK06521 291 VLYALA---EHDLKRLLAYSTIENIGIIFVGLgLAMvfiaYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATG 367
|
170 180 190
....*....|....*....|....*....|....*.
gi 1916859119 327 SRSLLINKGMINLMPTMSfWWFLLSSSNMAAPPSLN 362
Cdd:PRK06521 368 TRDMEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
113-365 |
1.84e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 49.97 E-value: 1.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTlFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLL------FDCGSFYFMFYVF 186
Cdd:PRK12665 137 YVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLavrldeLPSGTRTALFAVL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 187 sMFAFLVKMPMFLFHLWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVIsclglcFNYFWLSLSLFGGAVISFI--- 263
Cdd:PRK12665 216 -LVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL------FPGGGLDTLLMVVALLTMVvgi 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 264 --CFRQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMP 341
Cdd:PRK12665 289 lgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASP 368
|
250 260
....*....|....*....|....
gi 1916859119 342 TMSFWWFLlsssnmaapPSLNLIG 365
Cdd:PRK12665 369 LLAVLFFV---------PALNLGG 383
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
194-401 |
9.05e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 48.12 E-value: 9.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 194 KMPMFLFHLWLPKAHVEA-PIS-----GSMILAGVLLKLGGYGIFRIMSVisclglcFNYFWLSLSLFGGAVISFICFRQ 267
Cdd:PRK12650 221 KSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAGIYLLLRFSPVFHDVAV-------WNWLLIIVGMITALMGAVFAVQK 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 268 VDLKSLIAYSSVAHMsmviGGLMTMNWWGCMGSLSLMV----GHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPtM 343
Cdd:PRK12650 294 TDLKKLTAYSTVSQL----GWIVATIGVGTPFALTAAVvhtlAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-F 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859119 344 SFWWFLLSSSNMAA-PPSLNLIGEFSLLNS-----IISWSPFMFLVLIFLsffSAVYTlYMYSY 401
Cdd:PRK12650 369 TFVSVTIAALSMAAvPPLFGFVSKEGMLTAfleapGGNAGVVLLLVGAAL---GAVFT-FAYSA 428
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
201-362 |
7.30e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.20 E-value: 7.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 201 HLWLPKAHVEAPISGSMILAGVLLKLGGYGIFrimsVISCLGLCFNYFWLSLSLFGGAVISFI----CFRQVDLKSLIAY 276
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGIL----TLSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 277 SSVAHMSMVIGGL-----------MTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTMSF 345
Cdd:PRK08042 276 HTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI 355
|
170
....*....|....*..
gi 1916859119 346 wWFLLSSSNMAAPPSLN 362
Cdd:PRK08042 356 -AMLVGLMAMAALPPLN 371
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
188-385 |
1.25e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 41.11 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 188 MFAFLVKMPMFLFHLWLPKAhVEAPISGSMIL-AGVLLKLGGYGIFRIMSVISCLGLCFNYFWLSLSLFGGAVISFICFR 266
Cdd:PRK06525 214 LFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLP 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 267 QVDLKSLIAYSSVAHMSMVIGGLMTM---NWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTM 343
Cdd:PRK06525 293 QQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLV 372
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1916859119 344 SFWWFLLSSSNMAAPP-------SLNLIGEFSLLNSIISWSPFMFLVLI 385
Cdd:PRK06525 373 GVGFCVAALAITGVPPfngffskFPIFAAGFELSVEYWILLPAMVLLLI 421
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
198-399 |
1.27e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 41.29 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 198 FLFHLWLPKAhVEAPISGS-------MILAGV--LLKLggYGIFRI----MSVISCLGLcfnyfwlsLSLFGGAVISFic 264
Cdd:COG1009 228 FPLHFWLPDA-MEGPTPVSallhaatMVKAGVylLARL--SPLFALspvwLTVVAIIGA--------ITALFAALIAL-- 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 265 fRQVDLKSLIAYSSVAHMsmvigGLMTMnwwgCMG------SLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMIN 338
Cdd:COG1009 295 -AQTDIKRVLAYSTVSQL-----GYMFL----ALGvgayvaALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRK 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859119 339 LMPtMSFWWFLLSSSNMAA-PPSLNLIGEFSLLNSII---SWSPFMFLVLIFLSFFSAVYTLYMY 399
Cdd:COG1009 365 KMP-ITAITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
113-396 |
1.82e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 40.70 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 113 YIFFESSLVPTlFLILGWGYQPERLQAGIYLIFYTLVASLPLLLVLFKINSVFNTLYFPLL------FDCGSFYFMFYVF 186
Cdd:PRK12663 134 YVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 187 SMFAFLVKMPMFLFHlWLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVI----SCLGLCFNYFWLSLSLFGGAVISF 262
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqeRELLHPLLATMAAITMVIGALGAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 263 IcfrQVDLKSLIAYSSVAHMSMVIGGLMTMNWWGCMGSLSLMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPT 342
Cdd:PRK12663 292 A---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPL 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1916859119 343 MSFWWFLLSSSNMAAPPSLNLIGEFSLLNSIISWSPFMFLVLIFLSFFSAVYTL 396
Cdd:PRK12663 369 FGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
198-365 |
2.54e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 40.29 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 198 FLFHLWLPKAhVEAPI-------SGSMILAGVLLklggygifrIMSVISCLGLCFNYFWLsLSLFGGAVI---SFICFRQ 267
Cdd:PRK12647 212 FPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYL---------LARLNPVLGGTPLWQTI-LPLFGGLTMltgALLAVRQ 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 268 VDLKSLIAYSSVahmsMVIGGLMTMNWWGCMGSLS----LMVGHGLCSSGLFCLSNIIYERLGSRSLLINKGMINLMPTM 343
Cdd:PRK12647 281 TDLKLILAYSTV----SALGTLVMLLGLGSELAIKaavlFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPIT 356
|
170 180
....*....|....*....|..
gi 1916859119 344 SFWWFLLSSSNMAAPPSLNLIG 365
Cdd:PRK12647 357 AAAALLAALSMAGLPPLFGFLA 378
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
189-373 |
6.05e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.00 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 189 FAFLVKMPMFLFHL--WLPKAHVEAPISGSMILAGVLLKLGGYGIFRIMSVISCLGlcFNYFWLSLSLFGGAVISFICFR 266
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIP--IGYFGLTILAIGAFSILFGALY 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859119 267 QV---DLKSLIAYSSV----AHMSMVIGGLMTMNWWGCMGSLSLM------VGHGLCSSGLFCLSNIIYERLGSRSLLIN 333
Cdd:PRK06459 244 AYvseNVKGLLAFSTIenngAILVALGLYMVTKQLITSIEHFSLItvilysFAHSVAKTGLFLSSGLQEKQSITYSKKIR 323
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1916859119 334 KGMINLMPTmsfwwfLLSSSNMAAPPSLNLIGEFSLLNSI 373
Cdd:PRK06459 324 NRWIELGLT------LLASSLSGLLPNIGGVASWLLLESL 357
|
|
| |
