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Conserved domains on  [gi|1916859163|gb|QOL00919|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Chorthippus maritimus huabeiensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.44e-150

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 424.18  E-value: 1.44e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   5 LLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 165 SFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859163 245 TLIFLGGDFYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.44e-150

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 424.18  E-value: 1.44e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   5 LLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 165 SFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859163 245 TLIFLGGDFYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-297 1.06e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 292.45  E-value: 1.06e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  13 LLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMISLIVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  93 MIFPYLTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMLD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 171 FMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1916859163 251 GDFYSYS------FFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-297 7.17e-94

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 281.25  E-value: 7.17e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   4 DLLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  84 NLMISLIVWMIFPYLTYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 162 LIGSFNMLDFMNYQF-YCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859163 241 SMLLTLIFLGG--------DFYSYS----FFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
13-297 7.42e-45

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 155.63  E-value: 7.42e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  13 LLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMISLIVW 92
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  93 MIFP----------YLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:NF040610   97 VAIPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 163 IGSFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:NF040610  177 AGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSF 256

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 243 LLTLIFLGG--------DFYSYS-------FFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:NF040610  257 LVVLLFLGGwnlpgfvtDIPVLGiilptlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.44e-150

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 424.18  E-value: 1.44e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   5 LLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 165 SFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859163 245 TLIFLGGDFYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-298 1.87e-128

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 368.21  E-value: 1.87e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   6 LMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  86 MISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 166 FNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLT 245
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1916859163 246 LIFLGGDFYSYSFF--IKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLN 298
Cdd:MTH00225  241 ILFFGGFFVTIDLFliLKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLA 295
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-298 4.77e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 349.55  E-value: 4.77e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   6 LMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  86 MISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 166 FNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLT 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859163 246 LIFLGGDFYSY-----SFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLN 298
Cdd:MTH00143  241 VLFFGGSSVLFllggvVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLS 298
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-297 3.60e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 312.33  E-value: 3.60e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   7 MFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  87 ISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 167 NMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859163 247 IFLGG-------DFYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-297 6.21e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 311.46  E-value: 6.21e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   5 LLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 165 SFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1916859163 245 TLIFLGGDFYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSL 293
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-297 1.08e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 311.17  E-value: 1.08e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   5 LLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 165 SFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 245 TLIFLGGDFYSY-------SFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00071  244 TILFLGSTYNHLqpelstmNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITL 303
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-297 1.27e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 307.82  E-value: 1.27e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   5 LLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 165 SFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1916859163 245 TLIFLGGDfYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLIL 292
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-297 1.97e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 307.98  E-value: 1.97e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   5 LLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  85 LMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 165 SFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLL 244
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 245 TLIFL-------GGDFYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00111  244 TILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-297 8.17e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 296.13  E-value: 8.17e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   1 MYYDLLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  81 PIFNLMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 161 ILIGSFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859163 241 SMLLTLIFLGGDFY-------SYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00134  241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
NADHdh pfam00146
NADH dehydrogenase;
13-297 1.06e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 292.45  E-value: 1.06e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  13 LLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMISLIVW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  93 MIFPYLTYM--CSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMLD 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 171 FMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1916859163 251 GDFYSYS------FFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-310 2.39e-98

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 292.65  E-value: 2.39e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   3 YDLLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPI 82
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  83 FNLMISLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 163 IGSFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859163 243 LLTLIFLGGDFYSYSFF--------IKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILL 310
Cdd:MTH00040  241 LSVILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-297 7.17e-94

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 281.25  E-value: 7.17e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   4 DLLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  84 NLMISLIVWMIFPYLTYMC--SFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 162 LIGSFNMLDFMNYQF-YCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859163 241 SMLLTLIFLGG--------DFYSYS----FFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:COG1005   247 SALATTLFLGGwlgpfpilPLGGLPgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-311 1.04e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 280.13  E-value: 1.04e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   8 FILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  88 SLIVWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFN 167
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 168 MLDFMNYQfYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTLI 247
Cdd:MTH00010  165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859163 248 FLG----GDFYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFFIFFIGFKILLI 311
Cdd:MTH00010  244 FTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 5.39e-88

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 265.90  E-value: 5.39e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   5 LLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  85 LMISLIVWMIFPYLTY--MCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 163 IGSFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859163 243 LLTLIFLGG--DFYSYS--------FFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076  249 LITTLFLGGwlPPFPLGggipgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-297 8.26e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 263.13  E-value: 8.26e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   5 LLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFN 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  85 LMISLIVWMIFPYLT--YMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 163 IGSFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859163 243 LLTLIFLGGDFYSYS----------FFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00054  241 FGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSL 305
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-297 1.53e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 257.36  E-value: 1.53e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   1 MYYDLLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  81 PIFNLMISLIVWMIFPYL--TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 159 LIILIGSFNMLDFMNYQF-YCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859163 238 VFMSMLLTLIFLGG--------DFYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSL 308
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-297 4.06e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 218.35  E-value: 4.06e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   3 YDLLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPI 82
Cdd:MTH00029    4 YSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  83 FNLMISLIVWMIFPYL--TYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00029   84 ISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVI 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 161 ILIGSFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:MTH00029  164 LCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILM 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 241 SMLLTLIFLGG-----------------------DFYSYSFFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00029  244 SCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSL 323
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-297 1.20e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 197.43  E-value: 1.20e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  11 NFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMISLI 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  91 VWMIFPYLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFnmld 170
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSF---- 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 171 FMNYQFYCWFIIISFPLalscFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSMLLTLIFLG 250
Cdd:MTH00090  157 SFVSSFSLSLFVIYLPF----LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1916859163 251 gdfysYSFFIKIVFMSfLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00090  233 -----FSFLMLFLIFS-LLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-297 2.63e-50

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 168.18  E-value: 2.63e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   6 LMFILNFLLLIICVLIsVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIfnL 85
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVF--L 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  86 MISLIVWMIFPY-LTYMCSF-SYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:MTH00058   79 LVLLVVFYCFIYgSYYSGSYsSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCY 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 164 GSFNMLDFMnyqFYCWFIIISFPLALSCFTSC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:MTH00058  159 GSYSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSW 235

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1916859163 243 LLTLIFLGGDFYSysffIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00058  236 LGSVLFFGGGFVS----IMLLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
13-297 7.42e-45

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 155.63  E-value: 7.42e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  13 LLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPIFNLMISLIVW 92
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  93 MIFP----------YLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:NF040610   97 VAIPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 163 IGSFNMLDFMNYQFYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFMSM 242
Cdd:NF040610  177 AGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSF 256

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 243 LLTLIFLGG--------DFYSYS-------FFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:NF040610  257 LVVLLFLGGwnlpgfvtDIPVLGiilptlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-297 3.77e-33

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 125.06  E-value: 3.77e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   3 YDLLMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFVGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPI 82
Cdd:CHL00032   24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPS 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  83 FNLMISLIVWMIFP--YLTYMCSFSYGFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:CHL00032  104 IAVISILLSYLVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSIS 183

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 161 ILIGSFNMLDFMN----YQFYCWFII---ISFplaLSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAE 233
Cdd:CHL00032  184 LLSNSLSTVDIVEaqskYGFWGWNLWrqpIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVAS 260

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 234 YTSIVFMSMLLTLIFLGGDFYS--YSFFIKIVFMS---------------------FLFIWV--RGTLPRFRYDKLMYLA 288
Cdd:CHL00032  261 YLNLLVSSLFVTVLYLGGWNLSipYIFIPELFEINktggvfgttigifitlaktylFLFISIttRWTLPRLRMDQLLNLG 340


                  ....*....
gi 1916859163 289 WKSFLPLSL 297
Cdd:CHL00032  341 WKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-293 2.33e-25

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 102.95  E-value: 2.33e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163   6 LMFILNFLLLIICVLISVAFLTLLERKVLGYIQIRKGPnkvgfvGIPQPFSDAIKLVCKEQPIPIMSNyLLYYFSPIFNL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163  86 MISLIVWMIFPYLTYMCSFSYG--FLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859163 164 GSFNMLDFMNYQ---FYCWFIIISFPLALSCFTSCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIVFM 240
Cdd:COG0650   154 GSTSLSDIVAYQaahGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859163 241 SMLLTLIFLGGDFYSYS------FFIKIVFMSFLFIWVRGTLPRFRYDKLMYLAWKSFL 293
Cdd:COG0650   234 LSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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