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Conserved domains on  [gi|1916859257|gb|QOL01010|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Mongolotettix anomopterus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.04e-149

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 422.26  E-value: 1.04e-149
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   5 LLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  85 LTISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 165 SFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859257 245 TLIFLGSDFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.04e-149

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 422.26  E-value: 1.04e-149
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   5 LLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  85 LTISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 165 SFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859257 245 TLIFLGSDFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.90e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 279.36  E-value: 1.90e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  13 LILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFNLTISLIIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  93 MIFPYLTYM--CSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMLY 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 171 FMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859257 251 ------SDFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIF 302
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 3.92e-86

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 261.60  E-value: 3.92e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   4 DLLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  84 NLTISLIIWMIFPYLTYMC--SFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 162 LIGSFNMLYFMNYQF-YCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 241 SMLFTLIFLG-------SDFYSYI-----FYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFLIFFIGFKI 308
Cdd:COG1005   247 SALATTLFLGgwlgpfpILPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 1916859257 309 LLI 311
Cdd:COG1005   326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 1.04e-149

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 422.26  E-value: 1.04e-149
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   5 LLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  85 LTISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 165 SFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859257 245 TLIFLGSDFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKILL 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-308 4.00e-128

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 367.44  E-value: 4.00e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   6 LMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFNL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  86 TISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 166 FNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFT 245
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859257 246 LIFLGSDFY--SYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKI 308
Cdd:MTH00225  241 ILFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-306 2.97e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 344.93  E-value: 2.97e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   6 LMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFNL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  86 TISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 166 FNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFT 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859257 246 LIFLGSDFYSYI-----FYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGF 306
Cdd:MTH00143  241 VLFFGGSSVLFLlggvvFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-312 3.82e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 312.33  E-value: 3.82e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   5 LLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  85 LTISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 165 SFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859257 245 TLIFLGSDFYSY-------IFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKILLIS 312
Cdd:MTH00071  244 TILFLGSTYNHLqpelstmNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-310 9.30e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 310.91  E-value: 9.30e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   5 LLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  85 LTISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 165 SFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859257 245 TLIFLGSDfYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKILL 310
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-313 2.68e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 310.02  E-value: 2.68e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   7 MFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFNLT 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  87 ISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSF 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 167 NMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFTL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1916859257 247 IFLGS-------DFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKILLISF 313
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-306 4.47e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 309.15  E-value: 4.47e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   5 LLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  85 LTISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 165 SFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1916859257 245 TLIFLGSDFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGF 306
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-308 2.92e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 307.59  E-value: 2.92e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   5 LLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  85 LTISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIG 164
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 165 SFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1916859257 245 TLIFL-------GSDFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKI 308
Cdd:MTH00111  244 TILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPI 314
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-310 7.44e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 298.83  E-value: 7.44e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   1 MLYDLLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  81 PVFNLTISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 161 ILIGSFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1916859257 241 SMLFTLIFLGSDFYSYI-------FYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKILL 310
Cdd:MTH00134  241 NTLSAILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-310 2.56e-99

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 294.96  E-value: 2.56e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   3 YDLLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPV 82
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  83 FNLTISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 163 IGSFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1916859257 243 LFTLIFLG-SDFYSYIFYM-------KLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKILL 310
Cdd:MTH00040  241 LSVILFLGgGSPFNEIFPIniiivgiKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.90e-93

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 279.36  E-value: 1.90e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  13 LILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFNLTISLIIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  93 MIFPYLTYM--CSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFNMLY 170
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 171 FMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFTLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859257 251 ------SDFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIF 302
Cdd:pfam00146 243 gwlgpfPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-311 9.67e-92

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 275.51  E-value: 9.67e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   8 FILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFNLTI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  88 SLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGSFN 167
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 168 MLYFMNYQfYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSmLFTLI 247
Cdd:MTH00010  165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMS-LFTSV 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1916859257 248 FLGSDFYSYIF-----YMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKILLI 311
Cdd:MTH00010  243 FFTSFIPSIFIsdlmlILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 3.92e-86

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 261.60  E-value: 3.92e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   4 DLLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  84 NLTISLIIWMIFPYLTYMC--SFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLII 161
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 162 LIGSFNMLYFMNYQF-YCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 241 SMLFTLIFLG-------SDFYSYI-----FYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLnFLIFFIGFKI 308
Cdd:COG1005   247 SALATTLFLGgwlgpfpILPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 1916859257 309 LLI 311
Cdd:COG1005   326 LLF 328
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-302 1.28e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 257.74  E-value: 1.28e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   1 MLYDLLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  81 PVFNLTISLIIWMIFPYL--TYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 159 LIILIGSFNMLYFMNYQF-YCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1916859257 238 IFMSMLFTLIFLGS--------DFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIF 302
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-309 7.60e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 255.81  E-value: 7.60e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   5 LLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFN 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  85 LTISLIIWMIFPYLT--YMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 163 IGSFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 243 LFTLIFLGSDFYSYI----------FYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIF----FIGFKI 308
Cdd:MTH00054  241 FGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLvsgiLIGFNA 320


                  .
gi 1916859257 309 L 309
Cdd:MTH00054  321 L 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 5.15e-81

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 248.18  E-value: 5.15e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   5 LLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFN 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  85 LTISLIIWMIFPYLTY--MCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 163 IGSFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1916859257 243 LFTLIFLG--------SDFYSYIFYM--KLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076  249 LITTLFLGgwlppfplGGGIPGAIWFvlKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-308 4.83e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 218.35  E-value: 4.83e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   2 LYDLLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSP 81
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  82 VFNLTISLIIWMI--FPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:MTH00029   83 IISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 160 IILIGSFNMLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIF 239
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 240 MSMLFTLIFLG-----------------------SDFYSYIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLS 296
Cdd:MTH00029  243 MSCMMTIFFLGgwlspldgiptppeafsifeqiaSSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322

                         330
                  ....*....|..
gi 1916859257 297 LNFLIFFIGFKI 308
Cdd:MTH00029  323 LGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-308 1.80e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 199.35  E-value: 1.80e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  11 NFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFNLTISLI 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  91 IWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIiligSFNMLY 170
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIM----LHNNSF 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 171 FMNYQFYCWFIMISFPLglacFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLFTLIFLG 250
Cdd:MTH00090  157 SFVSSFSLSLFVIYLPF----LIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1916859257 251 sdfysyIFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFIGFKI 308
Cdd:MTH00090  233 ------FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-304 3.21e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 160.47  E-value: 3.21e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   6 LMFILNFLILIICVLIsVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSPVFNL 85
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  86 TISLIIWMIFPYLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILIGS 165
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 166 FNMlyfMNYQFYCWFIMISFPLGLACFASC-LAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFMSMLF 244
Cdd:MTH00058  161 YSL---VDFYYSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 245 TLIFLGSDFYSYIFYMKLtimsFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFI 304
Cdd:MTH00058  238 SVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-311 1.33e-32

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 123.52  E-value: 1.33e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   2 LYDLLMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFIGIPQPFSDAIKLVCKEQPIPIMSNYLLYYFSP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  82 VFNLTISLIIWMIFP--YLTYMCSFSYGFLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 159
Cdd:CHL00032  103 SIAVISILLSYLVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 160 IILIGSFNMLYFMN----YQFYCWFIMISfPLG-LACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEY 234
Cdd:CHL00032  183 SLLSNSLSTVDIVEaqskYGFWGWNLWRQ-PIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASY 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 235 TSIIFMSMLFTLIFLGSDFYS--YIFYMKL-----------TIMS------------FVFIWVRGTLPRFRYDKLMYLAW 289
Cdd:CHL00032  262 LNLLVSSLFVTVLYLGGWNLSipYIFIPELfeinktggvfgTTIGifitlaktylflFISITTRWTLPRLRMDQLLNLGW 341

                         330       340
                  ....*....|....*....|..
gi 1916859257 290 KSFLPLSLNFLIFFIGFKILLI 311
Cdd:CHL00032  342 KFLLPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 8.16e-24

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 98.72  E-value: 8.16e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257   6 LMFILNFLILIICVLISVAFLTLLERKVLGYIQIRKGPnkvgfiGIPQPFSDAIKLVCKEQPIPIMSNyLLYYFSPVFNL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257  86 TISLIIWMIFPYLTYMCSFSYG--FLFFLCCTSLSVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILI 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 164 GSFN---MLYFMNYQFYCWFIMISFPLGLACFASCLAETNRTPFDFAEGESELVSGFNIEYGAGGFTLIFLAEYTSIIFM 240
Cdd:COG0650   154 GSTSlsdIVAYQAAHGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1916859257 241 SMLFTLIFLGSDFYSY------IFYMKLTIMSFVFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLIFFI 304
Cdd:COG0650   234 LSLFVNLFLPWGIALTlllallLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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