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NADH dehydrogenase subunit 5, partial (mitochondrion) [Eremippus miramae]
List of domain hits
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Name | Accession | Description | Interval | E-value | |||
ND5 super family | cl33362 | NADH dehydrogenase subunit 5; Provisional |
1-87 | 1.41e-40 | |||
NADH dehydrogenase subunit 5; Provisional The actual alignment was detected with superfamily member MTH00165: Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 139.89 E-value: 1.41e-40
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Name | Accession | Description | Interval | E-value | |||
ND5 | MTH00165 | NADH dehydrogenase subunit 5; Provisional |
1-87 | 1.41e-40 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 139.89 E-value: 1.41e-40
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NuoL | COG1009 | Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-78 | 8.27e-28 | |||
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 104.85 E-value: 8.27e-28
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NDH_I_L | TIGR01974 | proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
6-78 | 5.99e-25 | |||
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport] Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 96.97 E-value: 5.99e-25
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Proton_antipo_M | pfam00361 | Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
4-80 | 8.56e-20 | |||
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla. Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 80.82 E-value: 8.56e-20
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Name | Accession | Description | Interval | E-value | |||
ND5 | MTH00165 | NADH dehydrogenase subunit 5; Provisional |
1-87 | 1.41e-40 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 139.89 E-value: 1.41e-40
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ND5 | MTH00151 | NADH dehydrogenase subunit 5; Provisional |
1-86 | 4.15e-33 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 119.56 E-value: 4.15e-33
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ND5 | MTH00004 | NADH dehydrogenase subunit 5; Validated |
4-86 | 7.69e-33 | |||
NADH dehydrogenase subunit 5; Validated Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 119.11 E-value: 7.69e-33
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ND5 | MTH00108 | NADH dehydrogenase subunit 5; Provisional |
5-86 | 1.08e-30 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 113.02 E-value: 1.08e-30
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ND5 | MTH00207 | NADH dehydrogenase subunit 5; Provisional |
1-78 | 1.30e-30 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 112.55 E-value: 1.30e-30
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ND5 | MTH00209 | NADH dehydrogenase subunit 5; Provisional |
1-86 | 2.51e-30 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 111.66 E-value: 2.51e-30
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ND5 | MTH00137 | NADH dehydrogenase subunit 5; Provisional |
5-86 | 4.02e-30 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 111.46 E-value: 4.02e-30
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ND5 | MTH00208 | NADH dehydrogenase subunit 5; Provisional |
5-86 | 7.74e-29 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 107.75 E-value: 7.74e-29
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ND5 | MTH00066 | NADH dehydrogenase subunit 5; Provisional |
5-87 | 1.19e-28 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 107.30 E-value: 1.19e-28
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ND5 | MTH00211 | NADH dehydrogenase subunit 5; Provisional |
1-86 | 7.16e-28 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 105.03 E-value: 7.16e-28
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PRK06590 | PRK06590 | NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-78 | 7.84e-28 | |||
NADH:ubiquinone oxidoreductase subunit L; Reviewed Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 104.86 E-value: 7.84e-28
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NuoL | COG1009 | Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-78 | 8.27e-28 | |||
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 104.85 E-value: 8.27e-28
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ND5 | MTH00020 | NADH dehydrogenase subunit 5; Reviewed |
5-79 | 8.16e-26 | |||
NADH dehydrogenase subunit 5; Reviewed Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 99.38 E-value: 8.16e-26
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ND5 | MTH00210 | NADH dehydrogenase subunit 5; Provisional |
6-80 | 4.14e-25 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 97.39 E-value: 4.14e-25
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NDH_I_L | TIGR01974 | proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
6-78 | 5.99e-25 | |||
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport] Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 96.97 E-value: 5.99e-25
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PRK07376 | PRK07376 | NADH-quinone oxidoreductase subunit L; |
8-77 | 4.45e-23 | |||
NADH-quinone oxidoreductase subunit L; Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 91.62 E-value: 4.45e-23
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ND5 | MTH00032 | NADH dehydrogenase subunit 5; Provisional |
1-79 | 5.36e-20 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 82.70 E-value: 5.36e-20
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Proton_antipo_M | pfam00361 | Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
4-80 | 8.56e-20 | |||
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla. Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 80.82 E-value: 8.56e-20
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HyfB | COG0651 | Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
6-78 | 1.72e-17 | |||
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism]; Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 75.57 E-value: 1.72e-17
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ndhF | CHL00025 | NADH dehydrogenase subunit 5 |
6-77 | 5.73e-17 | |||
NADH dehydrogenase subunit 5 Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 74.16 E-value: 5.73e-17
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PRK06521 | PRK06521 | hydrogenase 4 subunit B; Validated |
6-83 | 3.59e-14 | |||
hydrogenase 4 subunit B; Validated Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 66.07 E-value: 3.59e-14
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PRK12667 | PRK12667 | putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-78 | 1.19e-13 | |||
putative monovalent cation/H+ antiporter subunit D; Reviewed Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 64.61 E-value: 1.19e-13
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PRK08667 | PRK08667 | hydrogenase membrane subunit; Validated |
6-78 | 2.37e-13 | |||
hydrogenase membrane subunit; Validated Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 63.98 E-value: 2.37e-13
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PRK07390 | PRK07390 | NAD(P)H-quinone oxidoreductase subunit F; Validated |
5-72 | 4.38e-13 | |||
NAD(P)H-quinone oxidoreductase subunit F; Validated Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 63.01 E-value: 4.38e-13
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PRK12650 | PRK12650 | DUF4040 family protein; |
6-78 | 2.09e-12 | |||
DUF4040 family protein; Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 61.21 E-value: 2.09e-12
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PRK12668 | PRK12668 | Na(+)/H(+) antiporter subunit D; |
6-77 | 2.57e-12 | |||
Na(+)/H(+) antiporter subunit D; Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 60.68 E-value: 2.57e-12
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PRK12646 | PRK12646 | DUF4040 family protein; |
6-78 | 3.86e-12 | |||
DUF4040 family protein; Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 60.54 E-value: 3.86e-12
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PRK12648 | PRK12648 | putative monovalent cation/H+ antiporter subunit A; Reviewed |
6-78 | 4.73e-12 | |||
putative monovalent cation/H+ antiporter subunit A; Reviewed Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 60.20 E-value: 4.73e-12
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PRK08376 | PRK08376 | putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-80 | 5.07e-12 | |||
putative monovalent cation/H+ antiporter subunit D; Reviewed Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.11 E-value: 5.07e-12
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PRK12649 | PRK12649 | putative monovalent cation/H+ antiporter subunit A; Reviewed |
6-78 | 8.90e-12 | |||
putative monovalent cation/H+ antiporter subunit A; Reviewed Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 59.46 E-value: 8.90e-12
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PRK08668 | PRK08668 | NADH dehydrogenase subunit M; Validated |
6-80 | 1.21e-11 | |||
NADH dehydrogenase subunit M; Validated Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.85 E-value: 1.21e-11
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PRK08375 | PRK08375 | putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-78 | 2.70e-11 | |||
putative monovalent cation/H+ antiporter subunit D; Reviewed Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 57.97 E-value: 2.70e-11
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PRK12647 | PRK12647 | putative monovalent cation/H+ antiporter subunit A; Reviewed |
4-78 | 7.72e-11 | |||
putative monovalent cation/H+ antiporter subunit A; Reviewed Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 56.47 E-value: 7.72e-11
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PRK08377 | PRK08377 | NADH dehydrogenase subunit N; Validated |
6-77 | 1.57e-10 | |||
NADH dehydrogenase subunit N; Validated Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 55.93 E-value: 1.57e-10
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PRK12645 | PRK12645 | monovalent cation/H+ antiporter subunit A; Reviewed |
6-80 | 3.23e-10 | |||
monovalent cation/H+ antiporter subunit A; Reviewed Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 54.93 E-value: 3.23e-10
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PRK07691 | PRK07691 | putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-78 | 1.31e-09 | |||
putative monovalent cation/H+ antiporter subunit D; Reviewed Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 53.03 E-value: 1.31e-09
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PRK06589 | PRK06589 | putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-83 | 1.88e-09 | |||
putative monovalent cation/H+ antiporter subunit D; Reviewed Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 52.51 E-value: 1.88e-09
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PRK12644 | PRK12644 | putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-80 | 2.43e-09 | |||
putative monovalent cation/H+ antiporter subunit A; Reviewed Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.23 E-value: 2.43e-09
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PRK07234 | PRK07234 | putative monovalent cation/H+ antiporter subunit D; Reviewed |
8-78 | 5.14e-09 | |||
putative monovalent cation/H+ antiporter subunit D; Reviewed Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 51.49 E-value: 5.14e-09
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PRK06525 | PRK06525 | hydrogenase 4 subunit D; Validated |
6-77 | 2.85e-08 | |||
hydrogenase 4 subunit D; Validated Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 49.20 E-value: 2.85e-08
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PRK05846 | PRK05846 | NADH:ubiquinone oxidoreductase subunit M; Reviewed |
6-77 | 1.56e-07 | |||
NADH:ubiquinone oxidoreductase subunit M; Reviewed Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 47.12 E-value: 1.56e-07
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ND5 | MTH00095 | NADH dehydrogenase subunit 5; Provisional |
5-79 | 2.10e-07 | |||
NADH dehydrogenase subunit 5; Provisional Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 46.83 E-value: 2.10e-07
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PRK08042 | PRK08042 | formate hydrogenlyase subunit 3; Reviewed |
8-70 | 7.55e-07 | |||
formate hydrogenlyase subunit 3; Reviewed Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.20 E-value: 7.55e-07
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PRK06458 | PRK06458 | hydrogenase 4 subunit F; Validated |
6-77 | 1.16e-05 | |||
hydrogenase 4 subunit F; Validated Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 41.84 E-value: 1.16e-05
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PRK06277 | PRK06277 | energy conserving hydrogenase EhbF; |
6-78 | 8.47e-05 | |||
energy conserving hydrogenase EhbF; Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.63 E-value: 8.47e-05
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PRK12662 | PRK12662 | putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-73 | 2.36e-04 | |||
putative monovalent cation/H+ antiporter subunit D; Reviewed Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 38.18 E-value: 2.36e-04
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PRK12665 | PRK12665 | putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-78 | 3.78e-04 | |||
putative monovalent cation/H+ antiporter subunit D; Reviewed Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 37.64 E-value: 3.78e-04
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NuoN | COG1007 | NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-73 | 9.17e-04 | |||
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 36.63 E-value: 9.17e-04
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PRK12663 | PRK12663 | Na+/H+ antiporter subunit D; |
6-77 | 1.00e-03 | |||
Na+/H+ antiporter subunit D; Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 36.47 E-value: 1.00e-03
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PRK12561 | PRK12561 | NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
6-72 | 6.27e-03 | |||
NAD(P)H-quinone oxidoreductase subunit 4; Provisional Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 34.24 E-value: 6.27e-03
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Blast search parameters | ||||
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