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Conserved domains on  [gi|1938966147|gb|QPK42071|]
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NADH dehydrogenase subunit 6 (mitochondrion) [Zhengitettix curvispinus]

Protein Classification

NADH dehydrogenase subunit 6( domain architecture ID 10009599)

NADH dehydrogenase subunit 6 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 1-166 9.83e-21

NADH dehydrogenase subunit 6; Provisional


:

Pssm-ID: 214445  Cd Length: 160  Bit Score: 82.93  E-value: 9.83e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966147   1 MKMIMMIASLLTFYFMKSKPPnKPYLLLLLYKPLMTSFMMNIYMTNTWFSYLLMIIFIGGMMVLFIYITSIVPNENDKKN 80
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHP-LSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966147  81 KMLIMISLTMLIMLTMINIKYYNYFKtpetvNMNYYIMNQEYMMLNKIFNKHVYMLYITMMIYLFIALMAVNMIFNVEKG 160
Cdd:MTH00166   80 LKLLILFLLMLLLMLNNFIKNSEMSN-----FNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKITNIFKG 154


                  ....*.
gi 1938966147 161 PLRKKN 166
Cdd:MTH00166  155 PLRSKN 160
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 1-166 9.83e-21

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 82.93  E-value: 9.83e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966147   1 MKMIMMIASLLTFYFMKSKPPnKPYLLLLLYKPLMTSFMMNIYMTNTWFSYLLMIIFIGGMMVLFIYITSIVPNENDKKN 80
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHP-LSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966147  81 KMLIMISLTMLIMLTMINIKYYNYFKtpetvNMNYYIMNQEYMMLNKIFNKHVYMLYITMMIYLFIALMAVNMIFNVEKG 160
Cdd:MTH00166   80 LKLLILFLLMLLLMLNNFIKNSEMSN-----FNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKITNIFKG 154


                  ....*.
gi 1938966147 161 PLRKKN 166
Cdd:MTH00166  155 PLRSKN 160
 
Name Accession Description Interval E-value
ND6 MTH00166
NADH dehydrogenase subunit 6; Provisional
 1-166 9.83e-21

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214445  Cd Length: 160  Bit Score: 82.93  E-value: 9.83e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966147   1 MKMIMMIASLLTFYFMKSKPPnKPYLLLLLYKPLMTSFMMNIYMTNTWFSYLLMIIFIGGMMVLFIYITSIVPNENDKKN 80
Cdd:MTH00166    1 KMMLMMLLLILSIIFLFLNHP-LSMGLILIIQTILISLLLGLMMKSFWFSYILFLIFLGGMLVLFIYITSLASNEKFKFS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966147  81 KMLIMISLTMLIMLTMINIKYYNYFKtpetvNMNYYIMNQEYMMLNKIFNKHVYMLYITMMIYLFIALMAVNMIFNVEKG 160
Cdd:MTH00166   80 LKLLILFLLMLLLMLNNFIKNSEMSN-----FNNNFNFFENSFSLSKLYNFPTMLITLFMIIYLLLTLIVVVKITNIFKG 154


                  ....*.
gi 1938966147 161 PLRKKN 166
Cdd:MTH00166  155 PLRSKN 160
ND6 MTH00212
NADH dehydrogenase subunit 6; Provisional
 1-165 1.33e-05

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214460  Cd Length: 160  Bit Score: 43.07  E-value: 1.33e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966147   1 MKMIMMIASLLTFYFMKSKPPNKPYLLLLLYKPLMTSFMMNIYMTNTWFSYLLMIIFIGGMMVLFIYITSIVPNEndkkn 80
Cdd:MTH00212    1 MLLSLLLSLLLLLMLLFPLSAHPLTLGVSLLLSSLLSCLIITMESNSWYGYILFLIYIGGLLVLFGYMVALSPNE----- 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966147  81 kMLIMISLTMLIMLTMINIKYYNYFKTPETVNMNYYIMNQEYMMLNKIFNKHVYMLYITMMIYLFIALMAVNMIFNVEKG 160
Cdd:MTH00212   76 -HLFFKKYFKGFGMILISLNLYLLLMTLGSSNFSPMLNLKLELNVSKILSNNNIPILLFLGLILLIALLMVVKICQYYKG 154


                  ....*
gi 1938966147 161 PLRKK 165
Cdd:MTH00212  155 PLRPF 159
ND6 MTH00152
NADH dehydrogenase subunit 6; Provisional
 43-163 4.09e-04

NADH dehydrogenase subunit 6; Provisional


Pssm-ID: 214437  Cd Length: 163  Bit Score: 38.71  E-value: 4.09e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966147  43 YMTNTWFSYLLMIIFIGGMMVLFIYITSIVPNENDKKNKMLIMISLTMLIMLTMINIKYYNYFKTPETVNMNYYIMNQEY 122
Cdd:MTH00152   43 LTLSSWYGYLLFLVYVGGLLVMFAYVVSLSPNPLFGSNFKFVFFSLTLFGFLGLFFFFLYLYSSGGLSLSSLFDGSSGSL 122

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1938966147 123 MMLNKIFNKHVYMLYITMMIYLFIALMAVNMIFNVEKGPLR 163
Cdd:MTH00152  123 SFGGGLYSSSGWSIFVFLAVLLLIVMVSVVKICYYEEGSLR 163
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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