|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
9.31e-135 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 394.52 E-value: 9.31e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 1 MLMLLCSMFLMIPLSCFNMWWISQTWLFFFCFCFILRGNFDFFYVNLGFGLGLNFISWLMILLSFWICSLMLVASLKINF 80
Cdd:MTH00163 2 LKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 81 LGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWV 160
Cdd:MTH00163 82 KNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 161 ESSTGSLCYFLCEDKFD-GIYFYFAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMY 239
Cdd:MTH00163 162 YNNSGSLSFFLLNFFGSlNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSKL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 240 SLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFV 319
Cdd:MTH00163 242 GLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANII 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 320 YERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMYSY 399
Cdd:MTH00163 322 YERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSY 401
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1938966214 400 SQHGMYNYGLYGMSSGYVVEFHLLFLHWFPLNFMFLSCDYYC 441
Cdd:MTH00163 402 SQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
42-439 |
5.63e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 348.37 E-value: 5.63e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 42 FFYVNLGFGLGLNFISWLMILLSFWICSLMLVASLKINFLGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLP 121
Cdd:MTH00150 11 SSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIP 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 122 TFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGS----LCYFLCEDKFDGIYFYFAMIMAFLVKLPIYM 197
Cdd:MTH00150 91 TLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSsfmlLISSLRKLLSSMGLWGLLVFLAFLVKLPMYP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 198 FHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSV 277
Cdd:MTH00150 171 FHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 278 AHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPP 357
Cdd:MTH00150 251 GHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPP 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 358 SLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMYSYSQHGMYNYGLYGMSSGYVVEFHLLFLHWFPLNFMFLSC 437
Cdd:MTH00150 331 SLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKS 410
|
..
gi 1938966214 438 DY 439
Cdd:MTH00150 411 DL 412
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
6.27e-107 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 323.85 E-value: 6.27e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 1 MLMLLCSMFLMIPLSCFNMWW--ISQTWLFFFCFCFILRGNFDFFYVNLGFGLGLNFISWLMILLSFWICSLMLVASLKI 78
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWsfFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 79 NFLGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVIL 158
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 159 WVESSTGSLCYFLCEDKFDGIY----FYFAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFK 234
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFylflYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 235 YMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFC 314
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 315 LSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSL 394
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1938966214 395 YMYSYSQHGMYNYGLYGMSSGYVVEFHLLFLHWFPLNFMFLS 436
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILK 442
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
7.49e-103 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 313.60 E-value: 7.49e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 1 MLMLLCSMFLMIPLSCFNMWWISQTWLFFFCFCFIL-RGNFDFFYVNLGFGLGLNFISWLMILLSFWICSLMLVASLKIN 79
Cdd:MTH00014 4 LIMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTLLnLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 80 FLGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILW 159
Cdd:MTH00014 84 QNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 160 VESSTGSLCYFLCEDKFDGIYFY----FAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKY 235
Cdd:MTH00014 164 IFYTNNSLSMLMSSMEPPSIYLMnlwwLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 236 MYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCL 315
Cdd:MTH00014 244 FMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFAL 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 316 SSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLY 395
Cdd:MTH00014 324 ANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLF 403
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1938966214 396 MYSYSQHGMYNYGLYGMSSGYVVEFHLLFLHWFPLNFMFLSCD 438
Cdd:MTH00014 404 LYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
111-403 |
1.99e-94 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 291.71 E-value: 1.99e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 111 FYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFL-------CEDKFDGIYFYF 183
Cdd:MTH00124 118 FYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMlqlthptLTNSWTNLLLWL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 184 AMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGIIVSFICL 263
Cdd:MTH00124 198 ACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICL 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 264 RQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCM 343
Cdd:MTH00124 278 RQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTT 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 344 WWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMYSYSQHG 403
Cdd:MTH00124 358 WWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRG 417
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-436 |
8.15e-92 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 285.33 E-value: 8.15e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 1 MLMLLCSMFLMIPLSCF---NMWW---ISQTWLFFFCFCFILRGNFDFFYVNLGFGLGLNFISWLMILLSFWICSLMLVA 74
Cdd:MTH00044 1 MITLILLSLGIAITSWIvpkNKLWpisISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 75 SlkINFLGYFSGF----YSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLAS 150
Cdd:MTH00044 81 S--INHLSNNSPNnqrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 151 LPLLSVILWVESSTGSLC----YFLCEDKFDGIYF---YFAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLK 223
Cdd:MTH00044 159 LPLLISLIAIYSSSSSLSiplsELNWLTSLSSNSSsiwWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 224 LGGYGIIRVFKYMYMYSL-SLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLM 302
Cdd:MTH00044 239 LGGYGLIRLINLFSLPSAnNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILM 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 303 IGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFM 382
Cdd:MTH00044 319 IAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPII 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1938966214 383 FMLSFLSCVYSLYMYSYSQHGMYNYGLYGMSSGYVVEFHLLFLHWFPLNFMFLS 436
Cdd:MTH00044 399 GLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIIN 452
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-436 |
9.75e-90 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 279.52 E-value: 9.75e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 1 MLMLLCSMFLMIPLSCFNMWWISQTWLFFFCFCFILRGNFDFFYVNLGFGLGLNFISWLMILLSFWICSLMLVASLKI-- 78
Cdd:MTH00206 5 PLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHmk 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 79 NFLGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVIL 158
Cdd:MTH00206 85 NEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 159 WVESSTGSLCYFLCEDKFDGIYF----YFAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFK 234
Cdd:MTH00206 165 FLQNSLGSLSLYILYFSKLTTWNnnlwWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIIL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 235 YMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFC 314
Cdd:MTH00206 245 ILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFC 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 315 LSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSL 394
Cdd:MTH00206 325 LANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSL 404
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 1938966214 395 YMYSYSQHGMYNYGLYGMSSGYVVEFHLLFLHWFPLNFMFLS 436
Cdd:MTH00206 405 YMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILN 446
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
51-430 |
4.22e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 275.64 E-value: 4.22e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 51 LGLNFISWLMILLSFWICSLMLVAS---LKINFLgYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILIL 127
Cdd:MTH00068 56 FGIDQISSPLLILTCWLLPLMILASqnhLKNEPI-NRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIIT 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 128 GWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCE--------DKFDGIyFYFAMIMAFLVKLPIYMFH 199
Cdd:MTH00068 135 RWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLElmspmqlmTYTNKI-WWLACLLAFMVKMPLYGLH 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 200 LWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVAH 279
Cdd:MTH00068 214 LWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSH 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 280 MSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPSL 359
Cdd:MTH00068 294 MGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSP 373
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1938966214 360 NLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMYSYSQHGMYNYGLYGMSSGYVVEFHLLFLHWFPL 430
Cdd:MTH00068 374 NLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPM 444
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-430 |
1.30e-87 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 274.46 E-value: 1.30e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 1 MLMLLCSMFLMIPLSCF---NMWWISQTwlfffcFCFILRGNFDFFYVNLGFGLGLNF--------ISWLMILLSFWICS 69
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLsknNMIWINTT------TYSLLISLISLLLLNQPNDNSLNFsllffsdsLSTPLLILTTWLLP 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 70 LMLVAS---LKINFLgYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYT 146
Cdd:MTH00110 75 LMLMASqhhLSKEPL-TRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYT 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 147 FLASLPLLSVILWVESSTGSLCYFLC-------EDKFDGIYFYFAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAG 219
Cdd:MTH00110 154 LVGSLPLLVALLYIQNNLGSLNFLLLqlwaqplPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAA 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 220 VLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSV 299
Cdd:MTH00110 234 ILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGAT 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 300 MLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFM 379
Cdd:MTH00110 314 ALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITI 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1938966214 380 LFMFMLSFLSCVYSLYMYSYSQHGMYNYGLYGMSSGYVVEFHLLFLHWFPL 430
Cdd:MTH00110 394 ILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPL 444
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
46-430 |
4.78e-75 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 241.78 E-value: 4.78e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 46 NLGFGLGLNFISWLMILLSFWICSLMLVASLKINFLGYFSG--FYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTF 123
Cdd:MTH00127 52 SLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINRqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 124 ILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYF-------LCEDKFDGIYFYFAMIMAFLVKLPIY 196
Cdd:MTH00127 132 IIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLtlqysqpLQLSSWADKLWWAGCLLAFLVKMPLY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 197 MFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSS 276
Cdd:MTH00127 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 277 VAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAP 356
Cdd:MTH00127 292 VSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALP 371
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1938966214 357 PSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMYSYSQHGMYNYGLYGMSSGYVVEFHLLFLHWFPL 430
Cdd:MTH00127 372 PLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPL 445
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
106-424 |
1.35e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 196.81 E-value: 1.35e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 106 MQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCY-FLCEDKFDGIYFYFA 184
Cdd:MTH00217 129 LDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYqALCCLKIEKELQYFI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 185 MIMAFL---VKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRvFKYMYMYSLSLNC--FVIIFSLYGGIIVS 259
Cdd:MTH00217 209 FLGFFLslaIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIR-FSWPLLPEASEYFspLIQTLSLLAIIYGS 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 260 FICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMP 339
Cdd:MTH00217 288 LTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMP 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 340 SMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMYSYSQHGMYNYGLYGMSSGYVVE 419
Cdd:MTH00217 368 LFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRRE 447
|
....*
gi 1938966214 420 FHLLF 424
Cdd:MTH00217 448 FYVLL 452
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
46-397 |
2.09e-57 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 196.46 E-value: 2.09e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 46 NLGFGLGLNFISWLMILLSFWICSLMLVASLKINflGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFIL 125
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASWNEI--KKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 126 ILGWGYqPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCE------DKFDGIYFYFAMIMAFLVKLPIYMFH 199
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAElaaaplPLTAQLLLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 200 LWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVfkYMYMY---SLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSS 276
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRF--ALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 277 VAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAP 356
Cdd:COG1008 308 VSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLP 387
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1938966214 357 PSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMY 397
Cdd:COG1008 388 GTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
105-397 |
4.39e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 187.58 E-value: 4.39e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 105 SMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYF-LCEDKFDGIYFYF 183
Cdd:MTH00204 131 VLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQiLLNIKLPLSIQKW 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 184 AMIMAFL---VKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRV-FKYMYMYSLSLNCFVIIFSLYGGIIVS 259
Cdd:MTH00204 211 LLVGFFLslaVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGS 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 260 FICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMP 339
Cdd:MTH00204 291 LTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMP 370
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1938966214 340 SMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMY 397
Cdd:MTH00204 371 LFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-381 |
2.32e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 180.20 E-value: 2.32e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 105 SMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLcYFLCEDKFDGIYF--- 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTL-SFDELSKALTGGLnss 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 182 -----YFAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGI 256
Cdd:pfam00361 80 gllllFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 257 IVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLS-SFVYERKGSRLFILNKGMM 335
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1938966214 336 SYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLF 381
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVL 285
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
46-397 |
3.50e-49 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 174.62 E-value: 3.50e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 46 NLGFGLGLNFISWLMILLSFWICSLMLVASLkiNFLGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFIL 125
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLTALLTPLAVLASW--EEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 126 ILGWGYqPERVSAGMYLMLYTFLASLPLLSVILWV----ESSTGSLCYF-LCEDKFDGIYFYFAMI---MAFLVKLPIYM 197
Cdd:PRK05846 151 IGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIAdLLNLPLPPGVQYWLFLaffIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 198 FHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMY-MYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSS 276
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 277 VAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAP 356
Cdd:PRK05846 310 ISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1938966214 357 PSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMY 397
Cdd:PRK05846 390 GTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
46-397 |
8.88e-47 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 167.81 E-value: 8.88e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 46 NLGFGLGLNFISWLMILLSFWICSLMLVASLKInfLGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFIL 125
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASWES--IQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 126 ILGWGyQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGsLCYFLCEDKFDGIYF------YFAMIMAFLVKLPIYMFH 199
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGG-GTFDLLELLNLPLPFgvqtwlFLAFFIAFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 200 LWLPSAHVEAPISGSMILAGVLLKLGGYGIIRV-FKYMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVA 278
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 279 HMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPS 358
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330 340 350
....*....|....*....|....*....|....*....
gi 1938966214 359 LNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLYMY 397
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
106-395 |
3.55e-41 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 153.15 E-value: 3.55e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 106 MQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCEDKFDGI------ 179
Cdd:MTH00226 151 LDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVseqtqk 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 180 YFYFAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRV-FKYMYMYSLSLNCFVIIFSLYGGIIV 258
Cdd:MTH00226 231 WIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLsWPILPLGAQNLAPAVIAMGIVGIVYG 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 259 SFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYM 338
Cdd:MTH00226 311 SFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITM 390
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966214 339 PSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSLY 395
Cdd:MTH00226 391 PIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
63-434 |
3.22e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 148.52 E-value: 3.22e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 63 LSFWICSLMLVASLKINFLGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYL 142
Cdd:MTH00094 39 FVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 143 MLYTFLASLPLLSVILWVESSTgSLCYFlceDKFDGIYFYFAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLL 222
Cdd:MTH00094 119 LFYAAFFSFPFLFVYLKNFFFF-SLCYF---DFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 223 KLGGYGIIRVFKYMymySLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLM 302
Cdd:MTH00094 195 KLGTAGFLRILGSL---NFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMM 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 303 IGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYSHCFMLFM 382
Cdd:MTH00094 272 LAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFI 351
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1938966214 383 FMLSFLSCVYSLYMYSYSQHGMYNYGLYGMSSGYVVEFHLLFLHWFPLNFMF 434
Cdd:MTH00094 352 FFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMFWLSLFY 403
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-322 |
2.00e-31 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 125.91 E-value: 2.00e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 47 LGFGLGLNFISWLMILLSFWICSLMLVASLKINflgYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILI 126
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT---RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 127 LGWGYQpERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCEDKFD------GIYFYFAMIMAFLVKLPIYMFHL 200
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKsyplalELLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 201 WLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMY-----MYSLSLNCFVIIFSLYGGiivsFICLRQVDLKMLIAYS 275
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLpdahvYFAPALAILGVVNIIYGA----LNAFAQDNVKRRLAYS 282
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1938966214 276 SVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYER 322
Cdd:PRK12561 283 SVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYER 329
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-401 |
6.54e-30 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 120.25 E-value: 6.54e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 47 LGFGLGLNFISWLMILLSFWICSLMLVASLK-INFLGYFSGFYSFVvLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFIL 125
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGyMRHERRGRRFYPLF-LLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 126 ILGWGYqPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYF---LCEDKFDGIYFYFAMIM---AFLVKLPIYMFH 199
Cdd:COG0651 147 VALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAdlaARLAELDPGLLLAAFALllvGFGIKAALFPLH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 200 LWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMY--MYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSV 277
Cdd:COG0651 226 FWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 278 AHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMcMWWFLLTVCNMSA-P 356
Cdd:COG0651 306 SQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLT-AAAFLIGALALAGlP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1938966214 357 PSLNLLGEIGLLNSVLSYSHCFMLFMFML-SFLSCVYSLYMYSYSQ 401
Cdd:COG0651 385 PLSGFVSKWLLLQAALEAGAWLLAAVLLLsSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
105-341 |
1.04e-24 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 106.18 E-value: 1.04e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 105 SMQLFNFYMFFEASLLPTFILILGWGYQpERVSAGMYLMLYTFLASLPLLSVILwvesstGSLCYFLCEDKFD------- 177
Cdd:CHL00011 131 SRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVL------GMGLYGSNEPTLNfetlanq 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 178 ------GIYFYFAMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNC-FVIIF 250
Cdd:CHL00011 204 sypvalEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSpWLVIV 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 251 SLYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERkgSRLFIL 330
Cdd:CHL00011 284 GAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDR--IRLVYL 361
|
250
....*....|...
gi 1938966214 331 NK--GMMSYMPSM 341
Cdd:CHL00011 362 DEmgGIAIPMPKI 374
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
111-326 |
9.81e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 103.24 E-value: 9.81e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 111 FYMFFEASLLPTFILILGWGYQpERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCEDKFDG------IYFYFA 184
Cdd:PRK06473 132 FFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTlplstqLLLLAP 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 185 MIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLS-----LNCFVIIFSLYGgiivS 259
Cdd:PRK06473 211 ILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVylapwLATWAVVSVLYG----A 286
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966214 260 FICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSR 326
Cdd:PRK06473 287 SCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSR 353
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-339 |
2.00e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 99.18 E-value: 2.00e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 47 LGFGLGLNFISWLMILLSFWICSLMLVASLKINflGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILI 126
Cdd:PRK08375 69 IGIELRADSLSALFLLVTSILAIAALLYAIGYG--EHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 127 LGWGYQPERVSAGMYLMLYTFLASLPLLSVILwVESSTGSLCYFLCEDKFDG-----IYFYFAMImAFLVKLPIYMFHLW 201
Cdd:PRK08375 147 AMGGDRRALAAARKYLIVGLIGSTFLLIGVGL-LYGVTGTLNMADLAGALAEnptvvTAFGFVLL-ALALKAAVFPLHTW 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 202 LPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMY----MYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSV 277
Cdd:PRK08375 225 LPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFggdfRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTV 304
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1938966214 278 AHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMP 339
Cdd:PRK08375 305 SQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMP 366
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-366 |
2.61e-22 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 99.40 E-value: 2.61e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 45 VNLGFGLGLNFISWLMILLSFWICSLMLVASLKINFLGYFsgFYsFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFI 124
Cdd:PRK02546 77 LGLTWSVGADGLSMPLILLTGFITTLAVLAAWPVTFKPKL--FY-FLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 125 LILGWGYQpERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCY---FLCEDKFD---GIYFYFAMIMAFLVKLPIYMF 198
Cdd:PRK02546 154 LLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFdmtALAAKDFGlgfQLLCYAGLLIAYGVKLPIVPL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 199 HLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNC-FVIIFSLYGGIIVSFICLRQVDLKMLIAYSSV 277
Cdd:PRK02546 233 HTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFApLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 278 AHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWfllTVCNMSapp 357
Cdd:PRK02546 313 SHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMW---TACSLA--- 386
|
....*....
gi 1938966214 358 SLNLLGEIG 366
Cdd:PRK02546 387 SLALPGMSG 395
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
45-336 |
5.69e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 89.00 E-value: 5.69e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 45 VNLGFGLGLNFISWLMILLSfwiCSLMLVASLKINFLGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFI 124
Cdd:PRK07363 69 LGLSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 125 LILGWGYQpERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCEDKFDGIYF------YFAMIMAFLVKLPIYMF 198
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLntqlilLTGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 199 HLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMY-----MYSLSLNCFVIIFSLYGgiivSFICLRQVDLKMLIA 273
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFpqtwsLVAPGLAIIGTISVIYG----ALSAIAQKDIKRMVA 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1938966214 274 YSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSR-LFILNkGMMS 336
Cdd:PRK07363 301 YSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRdLDVLN-GLMN 363
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
56-391 |
2.18e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 77.66 E-value: 2.18e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 56 ISWLMILLSfwicsLMLVASLKINFLGYFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILILGWGYQPER 135
Cdd:MTH00062 46 LSFYLILLV-----LFLGLYSQVMFYNLLSGVSRFFLFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSER 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 136 VSAGMYLMLYTFLASLPLLSVILWVESSTGSLcYFLCEDKFDGIYF--YFAMIMAFLVKLPIYMFHLWLPSAHVEAPISG 213
Cdd:MTH00062 121 YLASWYFLGYLLLTSLPLLLCLLYLSLVNGSF-NFSDWGSDDSVSLivYYVLSFMFITKVPLFPFHTWLPIVHAEASSPV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 214 SMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGIIVSFiclRQVDLKMLIAYSSVAHMSLVIAGLFVMNYW 293
Cdd:MTH00062 200 SIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITAC---SELDGKRWLAFLSLSHILVPVLGLFVGDWS 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 294 GMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLS 373
Cdd:MTH00062 277 SINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG 356
|
330
....*....|....*...
gi 1938966214 374 YSHCFMLFMFMLSFLSCV 391
Cdd:MTH00062 357 VLVYLLFWCFYLFFGGLV 374
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
39-339 |
1.00e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 73.11 E-value: 1.00e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 39 NFDFFYVNLGFGLGLNFISWLMILLSFWICSLMLVASLKINFL--GYFSGFYSFVVLSLMLFLYllfsSMQLFNFYMFFE 116
Cdd:PRK08668 53 KLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKndAYFNMFALMSLAGVLGVFL----ANDLLTLYIFWE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 117 ASLLPTFILILgWGYQPERVSAGMYLMLYTFLASLPLLSVILwVESSTGSLCY------FLCEDKFDGIYFYFAMIMAF- 189
Cdd:PRK08668 129 IMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYAMLYAIFL-IYAKTGTFDFadisqgLINDTSTGFALIVFLFLLAFg 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 190 LVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFkYMYMYSLSLNCFVI---------IFSLYGGI---I 257
Cdd:PRK08668 207 VAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVL-YVLPGTKLFSEFGTyrgvplfnyILAWLGNIsiiV 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 258 VSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSY 337
Cdd:PRK08668 286 GTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEK 365
|
..
gi 1938966214 338 MP 339
Cdd:PRK08668 366 MP 367
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-388 |
4.17e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 70.73 E-value: 4.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 199 HLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYM--YMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSS 276
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 277 VAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAP 356
Cdd:PRK06458 314 IEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMP 393
|
170 180 190
....*....|....*....|....*....|..
gi 1938966214 357 PSLNLLGEIGLLNSVLSYSHcFMLFMFMLSFL 388
Cdd:PRK06458 394 PFGVFISEFLILTAGLARGP-LLIAILLLLLL 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-375 |
4.71e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 70.77 E-value: 4.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 185 MIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFS-------LYGGII 257
Cdd:PRK12667 229 ALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALSpiliilgAVSAII 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 258 VSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSY 337
Cdd:PRK12667 309 GALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRK 388
|
170 180 190
....*....|....*....|....*....|....*...
gi 1938966214 338 MPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNSVLSYS 375
Cdd:PRK12667 389 MPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESG 426
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
105-370 |
8.18e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 67.06 E-value: 8.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 105 SMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCEDKFDGIYFYF- 183
Cdd:PRK08667 130 SANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 184 AMIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGIIVSFICL 263
Cdd:PRK08667 210 LLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYAL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 264 RQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLM-----------IGHGLCSSGLFCLSSFVYERKGSRLFILNK 332
Cdd:PRK08667 290 KEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMG 369
|
250 260 270
....*....|....*....|....*....|....*...
gi 1938966214 333 GMMSYMPSMCMWWFLLTVCNMSAPPSLNLLGEIGLLNS 370
Cdd:PRK08667 370 GLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYES 407
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-392 |
2.47e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 65.53 E-value: 2.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 53 LNFISWLMILLSFWI----CSLMLVASLKINFLGYFSGFYSFVVlslmlflyllfsSMQLFNFYMFFEASLLPTFILILG 128
Cdd:PRK12662 85 VNFIAVMSVLYGIYPnrkeISVNKIPSFYSAFLLCLGGLLGILV------------SNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 129 WGYQPERVSAGMYLMLYTFLASLPLLSVILwVESSTGSL----CYFLCEDKFDGIYFYFAMIMAFL---VKLPIYMFHLW 201
Cdd:PRK12662 153 GRDKKALVAAFEYLIIGTIGATFYLIGIGF-LYAITGTLnmgdMFLIIQDLPTNRAIQIGVLFIMVglfIKAALFPFHKW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 202 LPSAHVEAPISGSMILAGVLLKLGGYGIIRVF-----KYMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSS 276
Cdd:PRK12662 232 LIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 277 VAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMWWFLLTVCNMSAP 356
Cdd:PRK12662 312 ISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMP 391
|
330 340 350
....*....|....*....|....*....|....*..
gi 1938966214 357 PSLNLLGEIGLLNSVLSYSHCFMLFMFML-SFLSCVY 392
Cdd:PRK12662 392 PTSGFVAKWYILDAFIKSNAWIGLVVLLVgSGLSVIY 428
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-325 |
3.51e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 64.99 E-value: 3.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 108 LFNFYMFFEASLLPTFILiLGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCEDKFDGI-----YFY 182
Cdd:PRK12665 133 LFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELpsgtrTAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 183 FAMIM-AFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMySLSLNCFVIIFSLYGGIIVSFI 261
Cdd:PRK12665 212 FAVLLvAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALLTMVVGILG 290
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1938966214 262 CLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGS 325
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGS 354
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
185-313 |
3.61e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.78 E-value: 3.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 185 MIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSL--SLNCFVIIFSLYGGIIVSFIC 262
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAaeQFSNVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1938966214 263 LRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLF 313
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLF 342
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-322 |
2.18e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 62.28 E-value: 2.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 108 LFNFYMFFEASLLPTFILIlGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLcyflcedKFDGIY----FYF 183
Cdd:PRK07234 116 LISLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTF-------AFSGLAtadpEAF 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 184 AMI-MAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGgiivSFIC 262
Cdd:PRK07234 188 ALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFA 263
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 263 LRQVDLKMLIAYSSVAHMSLVIAGlfvmnywGMIGSVmLMIGHGLCSSGLFCLSSFVYER 322
Cdd:PRK07234 264 LLEKDLKRMLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-360 |
4.42e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 58.18 E-value: 4.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 108 LFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCEDKFDGIYFYFAMIM 187
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 188 ------AFLVKLPIYMFHLWLPSAHVEAPISGSMILagVLLKLGG-YGIIRVFKYMYMYSLSLNC---FVIIFSLYGGII 257
Cdd:PRK08376 223 lalfiaGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLATvgwVIIILGCLTMFV 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 258 VSFICLRQVDLKMLIAYSSVAHMSLVIAGLFV---------MNYWGMI---GSVMLMIGHGLCSSGLFCLSSFVYERKGS 325
Cdd:PRK08376 301 GVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVglaalgdpaMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGT 380
|
250 260 270
....*....|....*....|....*....|....*
gi 1938966214 326 RLFILNKGMMSYMPsMCMWWFLLTVCNMSAPPSLN 360
Cdd:PRK08376 381 RNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
46-326 |
6.15e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 57.90 E-value: 6.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 46 NLGFGLGL-NFISWLMILLSF-WICSLML-VASLKINFLGYFSGFYSFVVLSLMLFLYLLFsSMQLFNFYMFFEASLLPT 122
Cdd:PRK06589 74 NYSIGLHLePLGLIFLLLIGFlWICALLYtPKYLAINNIDSSSRFLFFFNLTILIGVLIAL-SSDLFTMFVCYELLTIST 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 123 FILIlGWGYQPERVSAGM-YLMLYTFLASLPLLSVILWVESSTGSLCYFLCED-KFDGIYFYFAMIMAFLVKLPIYMFHL 200
Cdd:PRK06589 153 AFLI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLfSKNQSIILLLMFIYGIAKTAIFPVHS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 201 WLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYS-----LSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYS 275
Cdd:PRK06589 232 WLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSylqriFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYS 311
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1938966214 276 SVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSR 326
Cdd:PRK06589 312 TISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKED 362
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
185-339 |
1.15e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 54.00 E-value: 1.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 185 MIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYS--LSLNCFVIIFSLYGGIIVSFIC 262
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966214 263 LRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMP 339
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMP 368
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
184-298 |
2.68e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 49.89 E-value: 2.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 184 AMIMAFL---VKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRV-FKYMYMYSLSLNCFVIIFSLYGGIIVS 259
Cdd:PRK06521 212 VFLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALGAISAVLGV 291
|
90 100 110
....*....|....*....|....*....|....*....
gi 1938966214 260 FICLRQVDLKMLIAYSSVAHMSLVIAGLFVmnywGMIGS 298
Cdd:PRK06521 292 LYALAEHDLKRLLAYSTIENIGIIFVGLGL----AMVFI 326
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
198-326 |
3.64e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 49.27 E-value: 3.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 198 FHLWLPSAHVEA-PISGSMILAGVLlKLGGYGIIRvFKYMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSS 276
Cdd:PRK12650 227 FHFWLPEAMAAItPVSAFLHAAAVV-KAGIYLLLR-FSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1938966214 277 VAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSR 326
Cdd:PRK12650 305 VSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTR 354
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
129-233 |
1.22e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 44.50 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 129 WGY-QPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCyFLCEDKFDGIYFYFAMImAFLVKLPIYMFHLWLPSAHV 207
Cdd:PRK12668 134 WARgTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFA-FGAIAGLGGTAAWLILI-GFGVNAAFPPLHAWLPDAYP 211
|
90 100
....*....|....*....|....*.
gi 1938966214 208 EAPISGSMILAGVLLKLGGYGIIRVF 233
Cdd:PRK12668 212 EATVTGSVFLSAFTTKTAVYALARAF 237
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
185-313 |
1.41e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 44.17 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 185 MIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKY-MYMYSLSLNCFVIIFSLYGGIIVSFICL 263
Cdd:TIGR01770 209 ILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYiLFGFSEAWQIFLAIIAFLSMLIGNFGAL 288
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1938966214 264 RQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLF 313
Cdd:TIGR01770 289 AQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
185-313 |
1.53e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.04 E-value: 1.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 185 MIMAFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLlKLGGYGII-RVFKYMYM-YSLSLNCFVIIFSLYGGIIVSFIC 262
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVLlRLLVVAFGgLSEDWQQVLAIIAIASMLVGNLAA 288
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1938966214 263 LRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLF 313
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
108-326 |
1.79e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 43.79 E-value: 1.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 108 LFNFYMFFEASLLPTFILILgWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCYFLCEDKFDGIYFYFAMIM 187
Cdd:PRK12663 130 LFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTT 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 188 -------AFLVKLPIYMFHlWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGIIV-S 259
Cdd:PRK12663 209 iallfllAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIgA 287
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1938966214 260 FICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSR 326
Cdd:PRK12663 288 LGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYR 354
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-394 |
2.43e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.40 E-value: 2.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 108 LFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVIlWVESSTGSLCYFLCEDKF-------DGIY 180
Cdd:PRK07691 130 IFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLINVVSSAFFVVAVA-ILYSVVGTLNMADISVKIaelsagqTGLI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 181 FYFAMIMAFLVKLPIYMFHL--WLPSAHVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFslYGGIIV 258
Cdd:PRK07691 209 TVVAILFLFVFATKAGLFPLyfWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILI--LALLTI 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 259 SFICL---RQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMM 335
Cdd:PRK07691 287 IFGVIgavAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLI 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 336 SYMPSMCmWWFLLTVCNMSA-PPSLNLLGEIGLLNSVLSYSHCFMLFMFMLSFLSCVYSL 394
Cdd:PRK07691 367 KRYPVLG-WMFFIAALSLAGiPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
112-406 |
4.23e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 42.82 E-value: 4.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 112 YMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLS--VILWVESSTGSLCYFLCE-DKFDGIYFYFAMIMA 188
Cdd:PRK12646 136 YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVgfIMLYIMTGTNNITEILGQaDHIKNHGLFIPMIFM 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 189 FLV----KLPIYMFHLWLPSAhVEAPISGSMILAGVLLKLGGYGIIRVFKYMYMYSLSLNCFVIIFSLYGGIIVSFICLR 264
Cdd:PRK12646 216 FLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALK 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 265 QVDLKMLIAYSSVAH----MSLV-IAGLFVMNYWGMIGSVMLMI---------GHGLCSSGLFCLSSFVYERKGSRLFIL 330
Cdd:PRK12646 295 QWDLKGILAYSTISQlgmiMAMVgIGGGYAQHQQDAIASIYVFVlfaalfhlmNHAIFKCALFMGVGIIDHEAGTRDIRI 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 331 NKGMMSYMPSMCMwWFLLTVCNMSAPPSLN-LLGEIGLLNSVLS------YSHCFMLFMFML----SFLSCVYSLYMYSY 399
Cdd:PRK12646 375 LSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDALTQtgqlsqFSLISMIIIVFIgviaSIFTFTYALYMVKE 453
|
....*..
gi 1938966214 400 SQHGMYN 406
Cdd:PRK12646 454 VFWGKYD 460
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-78 |
5.54e-04 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 39.43 E-value: 5.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 1 MLMLLCSMFLMIPLSCF---NMWW---ISQTWLFFFCFCFILRGNFDFFYVNLGFGLGLNFISWLMILLSFWICSLMLVA 74
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLskpKWLWttsTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
....
gi 1938966214 75 SLKI 78
Cdd:pfam01059 81 SQKH 84
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
67-360 |
5.58e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 42.33 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 67 ICSLMLVASLK-INFLG--YFSGFYSFVVLSLMLFLYLLFSSMQLFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLM 143
Cdd:PRK06277 78 IFVLSLIASLVlITGLGekKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMI 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 144 LYTFLASLPLLSVILwVESSTGSL------CYFLCEDKFDGIYFYFAMIM---AFLVKLPiyMFHLWLPSAHVEAPISGS 214
Cdd:PRK06277 158 LGNVAGSILLLGIGF-LLASTGTLnitdihNALLVNPTSPVIYGGLLLLIfglLYGSGLP--PFHTIKSDIYAKAKPFGS 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 215 MILAG----VLLKLgGYGIIRVFkYMYMYSLSLNCFVIIFSLYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVM 290
Cdd:PRK06277 235 ALLQTfskfVLVAL-MLVIFKLF-GGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 291 NYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMPSMCMwWFLLTVCNMSAPPSLN 360
Cdd:PRK06277 313 TPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAF-MVLCAKLAISGVPPFN 381
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
199-360 |
2.40e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 199 HLWLPSAHVEAPISGSMILAGVLLKLGGYGIIRVfkYMYMYSLSLNCFVIIFSLygGIIVSFI----CLRQVDLKMLIAY 274
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGILTL--SLLGGNAPLWWGVALLVL--GMITAFVgglyALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 275 SSVAHMSLVIAGLF-----------VMNYWGMIGSVMLMIGHGLCSSGLFCLSSFVYERKGSRLFILNKGMMSYMP--SM 341
Cdd:PRK08042 276 HTLENIGIILLGLGagvtgialeqpALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPviSI 355
|
170
....*....|....*....
gi 1938966214 342 CMwwfLLTVCNMSAPPSLN 360
Cdd:PRK08042 356 AM---LVGLMAMAALPPLN 371
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
108-313 |
2.63e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 40.14 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 108 LFNFYMFFEASLLPTFILILGWGYQPERVSAGMYLMLYTFLASLPLLSVILWVESSTGSLCY---FLCEDKFDGIYFYFA 184
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFselLAAAPTILSSPLLTL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 185 MIMAFLV----KLPIYMFHLWLPSAhVEAPISGS-------MILAGVLLklggygIIRVFKYMYMYSLSLNcFVIIFSLY 253
Cdd:COG1009 213 ILLLLLLgafgKSAQFPLHFWLPDA-MEGPTPVSallhaatMVKAGVYL------LARLSPLFALSPVWLT-VVAIIGAI 284
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 254 GGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWgmiGSVMLMIGHGLCSSGLF 313
Cdd:COG1009 285 TALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYV---AALFHLLTHAFFKALLF 341
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
177-313 |
4.77e-03 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 39.33 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 177 DGIYFYFAMIM---AFLVKLPIYMFHLWLPSAHVEAPISGSMILAGVLlKLGGYGI-IRVFKY-MYMYSLSLNCFVIIFS 251
Cdd:COG1007 198 NSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAVLA 276
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1938966214 252 LYGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLF 313
Cdd:COG1007 277 VLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
112-313 |
5.24e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 39.14 E-value: 5.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 112 YMFFEASLLPTFILIlgwGYQPERV----SAGMYLMLYTF--LASLPLLsVILWVESSTGSLCYFLcEDKFDGIYFYFAM 185
Cdd:PRK12644 132 YVFWELTTVLSFLLI---GHYAERAasrrAALQALLVTTAggLAMLVGI-IILGQAAGTYRLSELL-ADPPTGPAVSVAV 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1938966214 186 IMAF---LVKLPIYMFHLWLPSAhVEAPI-------SGSMILAGVLL--KLG-GYGIIRVFKYMymyslslncfVIIFSL 252
Cdd:PRK12644 207 VLILvgaLSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKAGIYLvaRLApGFADVPVWRPT----------VLVLGL 275
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1938966214 253 YGGIIVSFICLRQVDLKMLIAYSSVAHMSLVIAGLFVMNYWGMIGSVMLMIGHGLCSSGLF 313
Cdd:PRK12644 276 ATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| |
