|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 691.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 12 IKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 92 FICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 172 DNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILLCLINPYIL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 252 GDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYPINQILFWMMVI 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1939459548 332 VVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLIN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-365 |
4.00e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 373.36 E-value: 4.00e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 12 IKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 92 FICIYLHVGRGIYYGSFMYMH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGF 169
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 170 AVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPIG----LNSNIDKIPFHPYFTFKDSITFVIMtsLLILLC 244
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVF--LGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 245 LINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPFYNKTKFRGIQFYPIN 322
Cdd:COG1290 258 LAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1939459548 323 QILFWMMVIVVFLLTWIGKRPveEPYIMTGQILTIIYFFYFLI 365
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
6.85e-87 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 261.53 E-value: 6.85e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 10 PLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 90 MFFICIYLHVGRGIYYGSFMYMH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1939459548 168 GFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
3.22e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 243.83 E-value: 3.22e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 19 LVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 99 VGRGIYYGSFMYMH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1939459548 177 NRFFTFHFVLPFVIAAMAAIHLFFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
234-340 |
2.03e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 55.96 E-value: 2.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 234 VIMTSL--LILLCLINPYILGDPdnfmpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFY-NK 310
Cdd:TIGR01156 43 VILGTIacVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNV 117
|
90 100 110
....*....|....*....|....*....|
gi 1939459548 311 TKFRGIQFYPINQILFWMMVIVVFlltWIG 340
Cdd:TIGR01156 118 NKFQNPFRRPVATTVFLFGTVVAL---WLG 144
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 691.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 12 IKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 92 FICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 172 DNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILLCLINPYIL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 252 GDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYPINQILFWMMVI 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 1939459548 332 VVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLIN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 625.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 1 MNKPLRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWII 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 81 RTLHANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 241 ILLCLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1939459548 321 INQILFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLINIHVANMWDKMI 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 612.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 1 MNKPLRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWII 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 81 RTLHANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 241 ILLCLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1939459548 321 INQILFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLI 365
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 610.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 5 LRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 85 ANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 165 VWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILLC 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 245 LINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYPINQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1939459548 325 LFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLI 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 604.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 1 MNKPLRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWII 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 81 RTLHANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 241 ILLCLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1939459548 321 INQILFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLINIHVANMWD-KMIK 378
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLEnKLLK 379
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 604.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 5 LRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 85 ANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 165 VWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILLC 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 245 LINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYPINQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1939459548 325 LFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLI 365
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 600.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 4 PLRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTL 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 84 HANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 164 WVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILL 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 244 CLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYPINQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1939459548 324 ILFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLINIHVANMW-DKMIK 378
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIeNNLLK 378
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 597.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 1 MNKPLRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWII 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 81 RTLHANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 241 ILLCLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1939459548 321 INQILFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLINIHVANMWDKMIK 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 550.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 4 PLRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTL 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 84 HANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 164 WVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILL 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 244 CLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYPINQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1939459548 324 ILFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLI 365
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 520.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 1 MNKPLRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWII 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 81 RTLHANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 241 ILLCLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1939459548 321 INQILFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLINIHVANMWDKMIK 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-367 |
5.11e-180 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 504.62 E-value: 5.11e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 4 PLRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTL 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 84 HANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 164 WVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILL 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 244 CLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYPINQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1939459548 324 ILFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLINI 367
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLI 365
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-374 |
2.35e-176 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 495.38 E-value: 2.35e-176
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 1 MNKPLRLKHPLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWII 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 81 RTLHANGASMFFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTD 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 161 LVQWVWGGFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 241 ILLCLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1939459548 321 INQILFWMMVIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLINIHVANMWD 374
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLE 374
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-365 |
6.68e-134 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 387.76 E-value: 6.68e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 17 NSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMFFICIY 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 97 LHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 177 NRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILLClINPYI---LGD 253
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG-IEPRIetlLQD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 254 PDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYPINQILFWMMVIVV 333
Cdd:MTH00033 252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331
|
330 340 350
....*....|....*....|....*....|...
gi 1939459548 334 FLLTWIGKRPV-EEPYIMTGQILTIIYFFYFLI 365
Cdd:MTH00033 332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-365 |
4.00e-128 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 373.36 E-value: 4.00e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 12 IKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 92 FICIYLHVGRGIYYGSFMYMH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGF 169
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 170 AVDNATLNRFFTFH-FVLPFVIAAMAAIHLFFLHQTGSNNPIG----LNSNIDKIPFHPYFTFKDSITFVIMtsLLILLC 244
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVF--LGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 245 LINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIALFLSISILMILPFYNKTKFRGIQFYPIN 322
Cdd:COG1290 258 LAFFFPINPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1939459548 323 QILFWMMVIVVFLLTWIGKRPveEPYIMTGQILTIIYFFYFLI 365
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-365 |
7.44e-126 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 366.19 E-value: 7.44e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 13 KILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 93 ICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 173 NATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTsLLILLCLINPYILG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 253 DPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNktkFRGIQFYPINQILFWMMVIV 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 1939459548 333 VFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLI 365
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
6.85e-87 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 261.53 E-value: 6.85e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 10 PLIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 90 MFFICIYLHVGRGIYYGSFMYMH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1939459548 168 GFAVDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-365 |
1.10e-83 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 258.76 E-value: 1.10e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 11 LIKILNNSLVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASM 90
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 91 FFICIYLHVGRGIYYGSFMYMHTWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFA 170
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 171 VDNATLNRFFTFHFVLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNI-DKIPFHPYFTFKDSITFVIMTSLLILLCLINPY 249
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 250 ILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIaLFLSISILMILPFYNKTKFRGIqfypINQILFWMM 329
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLI 315
|
330 340 350
....*....|....*....|....*....|....*.
gi 1939459548 330 VIVVFLLTWIGKRPVEEPYIMTGQILTIIYFFYFLI 365
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
3.22e-80 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 243.83 E-value: 3.22e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 19 LVDLPVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMFFICIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 99 VGRGIYYGSFMYMH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGGFSYPRelTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 1939459548 177 NRFFTFHFVLPFVIAAMAAIHLFFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
3.30e-48 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 160.87 E-value: 3.30e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 89 SMFFICIYLHVGRGIYYGSFMYMH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 167 GGFAVDNATLNRFFTFHF-VLPFVIAAMAAIHLFFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILLCL 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 1939459548 246 INPYILGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
7.26e-48 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 159.35 E-value: 7.26e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 208 NPIGLNSNIDKIPFHPYFTFKDSITFVIMTSLLILLCLINPYILGDPDNFMPANPLVTPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1939459548 288 KLGGVIALFLSISILMILPFYNKTKFRGiQFYPINQILFWMMVIVVFLLTWIGKRPVEEPYIMTGQI 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
4.50e-43 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 145.31 E-value: 4.50e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFYNKTKFRGIQFYPINQILFWMMVIVVFLLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 1939459548 339 IGKRPVEEPYIMTGQILTIIY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
23-210 |
2.19e-38 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 137.15 E-value: 2.19e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 23 PVPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMFFICIYLHVGRG 102
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 103 IYYGSFMYMH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFF 180
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|.
gi 1939459548 181 TFH-FVLPFVIAAMAAIHLFFLHQTGSNNPI 210
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
24-210 |
1.98e-32 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 120.98 E-value: 1.98e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 24 VPTNISFWWNFGSLLGLCLIIQIITGLFLAMHYTPNIEMAFSSVIYICRDVNNGWIIRTLHANGASMFFICIYLHVGRGI 103
Cdd:CHL00070 26 VPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 104 YYGSFMYMH--TWMIGTIILFLVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWVWGGFAVDNATLNRFFT 181
Cdd:CHL00070 106 LTGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYS 185
|
170 180 190
....*....|....*....|....*....|
gi 1939459548 182 FH-FVLPFVIAAMAAIHLFFLHQTGSNNPI 210
Cdd:CHL00070 186 LHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
234-346 |
4.96e-11 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 60.58 E-value: 4.96e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 234 VIMTS--LLILLCLINPYILGDPdnfmpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFY-NK 310
Cdd:COG5679 44 VILGTiaLCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIeNV 118
|
90 100 110
....*....|....*....|....*....|....*.
gi 1939459548 311 TKFRGIQFYPINQILFWMMVIVVFLLTWIGKRPVEE 346
Cdd:COG5679 119 NKFQNPFRRPVATAVFLFGTLVTLWLGIGAALPIDK 154
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
234-340 |
1.84e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 58.86 E-value: 1.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 234 VIMTSLLILLCL--INPYILGDPdnfmpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFY-NK 310
Cdd:CHL00058 43 VILGTIACNVGLavLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNV 117
|
90 100 110
....*....|....*....|....*....|
gi 1939459548 311 TKFRGIQFYPINQILFwmmVIVVFLLTWIG 340
Cdd:CHL00058 118 NKFQNPFRRPVATTVF---LIGTAVALWLG 144
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
234-340 |
2.03e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 55.96 E-value: 2.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1939459548 234 VIMTSL--LILLCLINPYILGDPdnfmpANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALFLSISILMILPFY-NK 310
Cdd:TIGR01156 43 VILGTIacVVGLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNV 117
|
90 100 110
....*....|....*....|....*....|
gi 1939459548 311 TKFRGIQFYPINQILFWMMVIVVFlltWIG 340
Cdd:TIGR01156 118 NKFQNPFRRPVATTVFLFGTVVAL---WLG 144
|
|
|