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Conserved domains on  [gi|2041261919|gb|QVL37752|]
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FMN-binding protein [Synergistota bacterium]

Protein Classification

FMN-binding protein( domain architecture ID 10008166)

FMN-binding protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG3976 COG3976
Uncharacterized conserved protein, contains FMN-binding domain [General function prediction ...
 1-65 3.87e-19

Uncharacterized conserved protein, contains FMN-binding domain [General function prediction only];


:

Pssm-ID: 443175  Cd Length: 116  Bit Score: 73.78  E-value: 3.87e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2041261919   1 MRVTVEGGVVTAIDLLRHENGRG---EKAEIVVDRVLAAQSLRVDAVSGATGSSKVILKAIERALKKA 65
Cdd:COG3976    47 VEVTVSDGKITDIEVLEHGETPGigdKAIEELPDEIVEAQSLDVDAVSGATLTSKAIKEAVEDALEQA 114
 
Name Accession Description Interval E-value
COG3976 COG3976
Uncharacterized conserved protein, contains FMN-binding domain [General function prediction ...
 1-65 3.87e-19

Uncharacterized conserved protein, contains FMN-binding domain [General function prediction only];


Pssm-ID: 443175  Cd Length: 116  Bit Score: 73.78  E-value: 3.87e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2041261919   1 MRVTVEGGVVTAIDLLRHENGRG---EKAEIVVDRVLAAQSLRVDAVSGATGSSKVILKAIERALKKA 65
Cdd:COG3976    47 VEVTVSDGKITDIEVLEHGETPGigdKAIEELPDEIVEAQSLDVDAVSGATLTSKAIKEAVEDALEQA 114
FMN_bind smart00900
This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR ...
 1-62 5.79e-07

This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins;


Pssm-ID: 214897 [Multi-domain]  Cd Length: 86  Bit Score: 42.33  E-value: 5.79e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2041261919   1 MRVTVEGGVVTAIDLLRH--------------ENGRGEKAEIVVDRVLAAQSL-RVDAVSGATGSSKVILKAIERAL 62
Cdd:smart00900 10 VTVKDDKGKITGVKVLEHketpgdgidepkwiGQFAGKALEKLAKEIVKKQSGgDVDAISGATITSRAVKDAVKRAL 86
FMN_bind pfam04205
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as ...
 1-62 1.16e-05

FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins. This domain is post-translationally flavinylated that may facilitate electron transfer, and thus, resembles multiheme cytochromes.


Pssm-ID: 461226 [Multi-domain]  Cd Length: 71  Bit Score: 38.36  E-value: 1.16e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2041261919  1 MRVTVEG-GVVTAIDLLRHENGRG-EKAEIVVDRVLAAQSLRVDAVSGATGSSKVILKAIERAL 62
Cdd:pfam04205  8 VLVGVDGdGTITGIKVLEHSETPGlGIKEQKVKKDKIEGGQDVDAISGATITSRAVVEAVKNAL 71
 
Name Accession Description Interval E-value
COG3976 COG3976
Uncharacterized conserved protein, contains FMN-binding domain [General function prediction ...
 1-65 3.87e-19

Uncharacterized conserved protein, contains FMN-binding domain [General function prediction only];


Pssm-ID: 443175  Cd Length: 116  Bit Score: 73.78  E-value: 3.87e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2041261919   1 MRVTVEGGVVTAIDLLRHENGRG---EKAEIVVDRVLAAQSLRVDAVSGATGSSKVILKAIERALKKA 65
Cdd:COG3976    47 VEVTVSDGKITDIEVLEHGETPGigdKAIEELPDEIVEAQSLDVDAVSGATLTSKAIKEAVEDALEQA 114
FMN_bind smart00900
This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR ...
 1-62 5.79e-07

This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins;


Pssm-ID: 214897 [Multi-domain]  Cd Length: 86  Bit Score: 42.33  E-value: 5.79e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2041261919   1 MRVTVEGGVVTAIDLLRH--------------ENGRGEKAEIVVDRVLAAQSL-RVDAVSGATGSSKVILKAIERAL 62
Cdd:smart00900 10 VTVKDDKGKITGVKVLEHketpgdgidepkwiGQFAGKALEKLAKEIVKKQSGgDVDAISGATITSRAVKDAVKRAL 86
FMN_bind pfam04205
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as ...
 1-62 1.16e-05

FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins. This domain is post-translationally flavinylated that may facilitate electron transfer, and thus, resembles multiheme cytochromes.


Pssm-ID: 461226 [Multi-domain]  Cd Length: 71  Bit Score: 38.36  E-value: 1.16e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2041261919  1 MRVTVEG-GVVTAIDLLRHENGRG-EKAEIVVDRVLAAQSLRVDAVSGATGSSKVILKAIERAL 62
Cdd:pfam04205  8 VLVGVDGdGTITGIKVLEHSETPGlGIKEQKVKKDKIEGGQDVDAISGATITSRAVVEAVKNAL 71
Tpp15 COG4939
Membrane-anchored lipoprotein Tpp15, major membrane immunogen [Function unknown];
24-66 1.32e-03

Membrane-anchored lipoprotein Tpp15, major membrane immunogen [Function unknown];


Pssm-ID: 443966  Cd Length: 115  Bit Score: 34.14  E-value: 1.32e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 2041261919  24 EKAEIVVDRVLAAQSL-RVDAVSGATGSSKVILKAIERALKKAP 66
Cdd:COG4939    72 EAAPALAKYLVEKQDPeKVDVVSGATVSSKQFKELAEKALNAAK 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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