|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-445 |
6.57e-172 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 489.28 E-value: 6.57e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 1 MLKIIFFLLFLLPVCFINNMYWMVQIMLFFIGFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESVN 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 81 KYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFY 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 161 LMKKTGSMNFYLMNNFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQL 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 241 MNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANV 320
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 321 SYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLYLYS 400
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2062575403 401 FSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILKSDACMLM 445
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
33-446 |
5.71e-128 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 376.49 E-value: 5.71e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 33 FIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMF 112
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 113 YLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLM---NNFMFNYDLLYFCLLC 189
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLIsslRKLLSSMGLWGLLVFL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 190 AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTD 269
Cdd:MTH00150 161 AFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 270 LKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFL 349
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 350 LSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHW 429
Cdd:MTH00150 321 FCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHW 400
|
410
....*....|....*..
gi 2062575403 430 LPLNLLILKSDACMLML 446
Cdd:MTH00150 401 VPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
2-443 |
4.10e-123 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 365.46 E-value: 4.10e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 2 LKIIFFLLFLLPVCFINNMYWMVQIMLFFIGFIFLMMN--NFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASESV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFfsNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 80 NKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 160 YLMKKTGSMNFYLMNNFMFNYDLLY---FCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVIS 236
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYLFlywIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 237 FLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFC 316
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 317 LANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTL 396
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2062575403 397 YLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILKSDACM 443
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-440 |
3.26e-121 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 360.60 E-value: 3.26e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 1 MLKIIFFLLFLLPVCFINNMYWMVQI---MLFFIGFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASE 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTfstLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 78 SVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIG 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 158 IFYLMKKTGSMNFYLMN---NFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV 234
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSmepPSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 235 ISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGL 314
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 315 FCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAY 394
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2062575403 395 TLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILKSD 440
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
4.09e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 350.26 E-value: 4.09e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 1 MLKIIFFLLFLLPVCFI---NNMYWMVQIMLFFIGFIFLM-MNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLAS 76
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskpKFLWTNTTTYSLLIALLSLQwLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 77 ESVNKYN--NYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPM 154
Cdd:MTH00124 81 QNHLQHEplQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 155 LIGIFYLMKKTGSMNFYLM---NNFMFNY---DLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGG 228
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLqltHPTLTNSwtnLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 229 YGLLRVISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHG 308
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 309 LCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLS 388
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410
....*....|....*....
gi 2062575403 389 FFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTL 419
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
1.27e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 336.12 E-value: 1.27e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 1 MLKIIFFLLFLLPVCFINNMYWMVQIML---FFIGFIFLMM-NNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLAS 76
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTtnsLIIAFLSLMWfNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 77 ESVNKYN--NYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPM 154
Cdd:MTH00068 81 QNHLKNEpiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 155 LIGIFYLMKKTGSMNFYLMNNFMFNYDLLY-------FCLLcAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLG 227
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYtnkiwwlACLL-AFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 228 GYGLLRVISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAH 307
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 308 GLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLL 387
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2062575403 388 SFFSAAYTLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILK 438
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILK 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-444 |
1.78e-111 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 335.79 E-value: 1.78e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 1 MLKIIFFLLFLLPVCFI--NNMYWMVQI----MLFFIGfIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLL 74
Cdd:MTH00044 1 MITLILLSLGIAITSWIvpKNKLWPISIsqssLISLLS-LFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 75 ASESVNKYNNYKN--LFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSL 152
Cdd:MTH00044 80 ASINHLSNNSPNNqrTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 153 PMLIGIFYLMKKTGSMNFYLMN------NFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKL 226
Cdd:MTH00044 160 PLLISLIAIYSSSSSLSIPLSElnwltsLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 227 GGYGLLRVISFLQLMNLKY-SFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMI 305
Cdd:MTH00044 240 GGYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMI 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 306 AHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLS 385
Cdd:MTH00044 320 AHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575403 386 LLSFFSAAYTLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILKSDACML 444
Cdd:MTH00044 400 LATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIILI 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
3.73e-108 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 327.23 E-value: 3.73e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 1 MLKIIFFLLFLLPVCFI--NNMYWM-VQIMLFFIGFI-FLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLAS 76
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLskNNMIWInTTTYSLLISLIsLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 77 ES--VNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPM 154
Cdd:MTH00110 81 QHhlSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 155 LIGIFYLMKKTGSMNFYLMN------NFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGG 228
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQlwaqplPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 229 YGLLRVISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHG 308
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 309 LCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLS 388
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410
....*....|....*....
gi 2062575403 389 FFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00110 401 LITALYSLYMLITTQRGKL 419
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-438 |
3.14e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 314.57 E-value: 3.14e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 3 KIIFFLLFLLPVCFINNMYWMVQIMLFF-----IGFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLASE 77
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFsfliaLLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 78 SVNKYN--NYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPML 155
Cdd:MTH00206 81 NHMKNEpiNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 156 IGIFYLMKKTGSMNFYLM---NNFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLL 232
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILyfsKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 233 RVISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSS 312
Cdd:MTH00206 241 RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 313 GLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFFSA 392
Cdd:MTH00206 321 ALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2062575403 393 AYTLYLYSFSQHGKLFSGVYSFSGGKIREYLLMLLHWLPLNLLILK 438
Cdd:MTH00206 401 IYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILN 446
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
2.39e-93 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 289.55 E-value: 2.39e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 1 MLKIIFFLLFLLPVCFINNMYWMVQIMLFFIGFIFLMMNNFMNY-----WSEISYFLGCDMLSYGLVLLSLWICSLMLLA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNlsetgWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 76 SES--VNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLP 153
Cdd:MTH00127 81 SQNhtAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 154 MLIGIFYLMKKTGSMNFYLMNNFMFNYDLLYF-------CLLcAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKL 226
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWAdklwwagCLL-AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 227 GGYGLLRVISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIA 306
Cdd:MTH00127 240 GGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 307 HGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSL 386
Cdd:MTH00127 320 HGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGL 399
|
410 420
....*....|....*....|.
gi 2062575403 387 LSFFSAAYTLYLYSFSQHGKL 407
Cdd:MTH00127 400 GTLITAGYSLYMFLMTQRGPL 420
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-399 |
2.86e-67 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 222.65 E-value: 2.86e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKYNNykNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRP--KLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 128 LGWGYqPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYD-----LLYFCLLCAFLVKMPMFLVHL 202
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLPltaqlLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLR-VISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAH 281
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRfALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 282 MGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTL 361
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350
....*....|....*....|....*....|....*...
gi 2062575403 362 NLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-388 |
1.51e-64 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 209.48 E-value: 1.51e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 106 SMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYD---- 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 182 --LLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFIWISISLVGGVL 259
Cdd:pfam00361 81 llLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 260 VSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLA-NVSYERLGSRSLLINKGLLN 338
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2062575403 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLS 388
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-399 |
5.98e-63 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 211.21 E-value: 5.98e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESVNKynNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEIK--KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 128 LGWGYqPERLQAGVYLLFYTLLVSLPMLIGIFYL----MKKTGSMNFYLMNNFMFNYD---LLYFCLLCAFLVKMPMFLV 200
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLPLPPGvqyWLFLAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 201 HLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR-VISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSV 279
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 280 AHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2062575403 360 TLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
2.95e-61 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 206.84 E-value: 2.95e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 104 FSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYDLL 183
Cdd:MTH00204 129 FSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQ 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 184 YFCLLCAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-SFLQLMNLKYSFIWISISLVGGVL 259
Cdd:MTH00204 209 KWLLVGFFLslaVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSwPLFPAASEYFAPLIVMLSVIAVIY 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 260 VSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNF 339
Cdd:MTH00204 289 GSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLT 368
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 340 MPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:MTH00204 369 MPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-399 |
5.87e-58 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 197.85 E-value: 5.87e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASEsvNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 128 LGWGyQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTG-SMNFYLMNNFMFNYD---LLYFCLLCAFLVKMPMFLVHLW 203
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPLPFGvqtWLFLAFFIAFAVKVPLFPLHTW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 204 LPKAHVEAPVSGSMILAGIMLKLGGYGLLRVIsfLQLM---NLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVA 280
Cdd:TIGR01972 226 LPDAHVEAPTAGSVILAGVLLKMGTYGFLRFN--LPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 281 HMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPT 360
Cdd:TIGR01972 304 HMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGT 383
|
330 340 350
....*....|....*....|....*....|....*....
gi 2062575403 361 LNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:TIGR01972 384 SGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
104-399 |
1.28e-57 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 196.81 E-value: 1.28e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 104 FSSMSLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYDL 182
Cdd:MTH00217 126 FTILDLVGFYILFEGILIP-MFLIIGiWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKEL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 183 LYFCLLCAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLMNLKYSFIWISISLVGGV 258
Cdd:MTH00217 205 QYFIFLGFFLslaIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAII 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 259 LVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLN 338
Cdd:MTH00217 285 YGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVI 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2062575403 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:MTH00217 365 TMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
104-398 |
1.37e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 170.87 E-value: 1.37e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 104 FSSMSLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLM--NNFMFNY 180
Cdd:MTH00226 148 FSVLDIFMFYILFEGVLIP-MYLILGiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLasCSHVVSE 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 181 DL---LYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-SFLQLMNLKYSFIWISISLVG 256
Cdd:MTH00226 227 QTqkwIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwPILPLGAQNLAPAVIAMGIVG 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 257 GVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGL 336
Cdd:MTH00226 307 IVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGL 386
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2062575403 337 LNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLYL 398
Cdd:MTH00226 387 SITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-417 |
1.43e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 160.07 E-value: 1.43e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 19 NMYWMVQIMLFFIGFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLasesvnkyNNYKNLFLLNIVILLL 98
Cdd:MTH00094 2 SLLFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLL--------SEKNFNLLILSNLLIL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 99 LLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKktgsMNFYLMNNFMF 178
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFF----FFSLCYFDFFL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 179 NYDLLYFCLLCaFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFlqlMNLKYSFIWISISLVGGV 258
Cdd:MTH00094 150 SWEMFFILSLS-FMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGS---LNFVYNNFWIIFSLLGMI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 259 LVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLN 338
Cdd:MTH00094 226 LSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFS 305
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575403 339 FMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLYLYSFSQHGKLFSGVYSFSGG 417
Cdd:MTH00094 306 SSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVG 384
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
48-375 |
9.47e-41 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 152.11 E-value: 9.47e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 48 ISYFLGCDMLSYGLVLLSLWICSLMLLASESVNkynNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT---RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 128 LGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYD-----LLYFCLLCAFLVKMPMFLVHL 202
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPlalelLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAH 281
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSH 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 282 MGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPaMTLWWFLLSS-ANMAAPPT 360
Cdd:PRK12561 287 MGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP-KTFALFTASSmASLALPGM 365
|
330
....*....|....*
gi 2062575403 361 LNLLGEISLLNSIVS 375
Cdd:PRK12561 366 SGFVSELTVFLGITS 380
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
55-403 |
1.53e-38 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 144.52 E-value: 1.53e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 55 DMLSYGLVLLSLWICSLMLLASESVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYqP 134
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT-K 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 135 ERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYD-----LLYFCLLCAFLVKMPMFLVHLWLPKAHV 209
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDpglllAAFALLLVGFGIKAALFPLHFWLPDAYP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 210 EAPVSGSMILAGIMLKLGGYGLLRVIS--FLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLA 287
Cdd:COG0651 234 AAPSPVSALLSGLLTKVGVYAILRVLTllFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 288 GLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEI 367
Cdd:COG0651 314 GLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKW 393
|
330 340 350
....*....|....*....|....*....|....*..
gi 2062575403 368 SLLNSIV-SWSWISMIMLSLLSFFSAAYTLYLYSFSQ 403
Cdd:COG0651 394 LLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-368 |
6.98e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 132.90 E-value: 6.98e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 48 ISYFLGCDMLSYGLVLLSLWICSLMLLAS-ESVNKYNNYknlfLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFL 126
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSdESIQRPRFY----YSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 127 ILGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYD-----LLYFCLLCAFLVKMPMFLVH 201
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPlstqlLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 202 LWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFIWISISLVGGVLVSLVC-LRQTDLKSLIAYSSVA 280
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 281 HMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPT 360
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGI 385
|
....*...
gi 2062575403 361 LNLLGEIS 368
Cdd:PRK06473 386 PGMVGFIA 393
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-358 |
2.40e-33 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 131.22 E-value: 2.40e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 52 LGCDMLSYGLVLLSLWICSLMLLASESVNKYNNyknLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWG 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPVTRNSR---LFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 132 YQpERLQAGVYLLFYTLLVSLPMLIGIFylmkktgSMNFYLMNNFMFNYD-------------LLYFCLLCAFLVKMPMF 198
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVL-------GMGLYGSNEPTLNFEtlanqsypvaleiLFYIGFLIAYAVKLPII 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 199 LVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRvISFLQLMNLKYSFI-WISIslVGGVLV---SLVCLRQTDLKSLI 274
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR-INMELLPHAHSIFSpWLVI--VGAIQIiyaASTSLGQRNLKKRI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 275 AYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSAN 354
Cdd:CHL00011 306 AYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMAS 385
|
....
gi 2062575403 355 MAAP 358
Cdd:CHL00011 386 LALP 389
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
52-358 |
4.51e-32 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 127.90 E-value: 4.51e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 52 LGCDMLSYGLVLLSLWICSLMLLASESVNkynnYK-NLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGW 130
Cdd:PRK02546 83 VGADGLSMPLILLTGFITTLAVLAAWPVT----FKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIW 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 131 GYQpERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMN----NFMFNYDLL-YFCLLCAFLVKMPMFLVHLWLP 205
Cdd:PRK02546 159 GGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTAlaakDFGLGFQLLcYAGLLIAYGVKLPIVPLHTWLP 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 206 KAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGI 284
Cdd:PRK02546 238 DAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2062575403 285 VLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAP 358
Cdd:PRK02546 318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALP 391
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-365 |
6.73e-27 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 112.88 E-value: 6.73e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 48 ISYFLGCDMLSYGLVLLSlwiCSLMLLASESVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 128 LGWGYQpERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMN----NFMFNYDLLYFC-LLCAFLVKMPMFLVHL 202
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAistqNLSLNTQLILLTgLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 203 WLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVisFLQLMNLKYSFIWISISLVGGVLV---SLVCLRQTDLKSLIAYSSV 279
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLRF--GLQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 280 AHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK07363 305 GHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAG 384
|
....*.
gi 2062575403 360 TLNLLG 365
Cdd:PRK07363 385 IPGLVG 390
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-398 |
1.40e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 103.04 E-value: 1.40e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 109 LFMFYLFFESSLIPTLFLIlGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLM-NNFMFNYDL---LY 184
Cdd:PRK08375 128 LFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLaGALAENPTVvtaFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 185 FCLLcAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI------SFLQLMNLKYSFIWI-SISLVGG 257
Cdd:PRK08375 207 FVLL-ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLaLLSMLVG 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 258 VLVSLVclrQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLL 337
Cdd:PRK08375 286 SLAALG---QDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLG 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2062575403 338 NFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVS-WSWISMIMLSLLSFFSAAYTLYL 398
Cdd:PRK08375 363 RRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRI 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
22-390 |
5.55e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 94.60 E-value: 5.55e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 22 WMVQIMLFFIGFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLS-----LWICSLMLLASESVNKYNNYKNLFLLNIVIL 96
Cdd:MTH00062 1 FYFFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIFDslsfyLILLVLFLGLYSQVMFYNLLSGVSRFFLFLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 97 LLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNF 176
Cdd:MTH00062 81 LIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 177 MFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLqlmNLKYSFIWISISLVG 256
Cdd:MTH00062 161 DSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFI---FSGSFLGYLFLCCLF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 257 GVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGL 336
Cdd:MTH00062 238 SVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSG 317
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2062575403 337 LNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLnsivsWSWISMIMLSLLSFF 390
Cdd:MTH00062 318 INGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLV-----SSSFGVLVYLLFWCF 366
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-391 |
4.68e-20 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 92.87 E-value: 4.68e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 1 MLKIIFFLLF--LLPVCFINNMYWMVQ---------IMLFFIGFIFLMMNN-----FMNYWSEISYFLGCDMLSYG-LVL 63
Cdd:PRK08667 6 FLGAILLLLAaaVIPLVFRHKRKRVWQsvlwlviaiALLLFAGSLQLFTGNpldipLWGIAPGLDITFHIDRLAAFfIIL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 64 LSLWICSLMLLASESVN--KYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLFLILGWGYQPERLQAGV 141
Cdd:PRK08667 86 IGLVSLCVAIYSLGYNEhmSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 142 YLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYDLLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAG 221
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 222 IMLKLGGYGLLRVISFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSY 301
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLD 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 302 TLM-----------IAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLL 370
Cdd:PRK08667 326 TLAllalggalfhsLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
410 420
....*....|....*....|....*.
gi 2062575403 371 NSI-----VSWSWISMIMLSLLSFFS 391
Cdd:PRK08667 406 ESFfqsfsVADPLIKILLFSVLAIFA 431
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
104-315 |
2.46e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 84.28 E-value: 2.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 104 FSSMSLFMFYLFFESSLIPTLFLILgWGYQPERLQAGVYLLFyTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFN---- 179
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGLINdtst 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 180 -YDLLYFCLLCAF-LVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFIWIS------ 251
Cdd:PRK08668 193 gFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYRgvplfn 272
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575403 252 --ISLVGGVLV---SLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLF 315
Cdd:PRK08668 273 yiLAWLGNISIivgTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-400 |
2.49e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 81.17 E-value: 2.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 190 AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVI-------SFLQLMNLKYSFIWISISLVGGVLVSL 262
Cdd:PRK12667 232 AFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGAL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 263 VCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPA 342
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPI 391
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2062575403 343 MTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSwswISMIMLSLLSFFSAAYTLYLYS 400
Cdd:PRK12667 392 ASFAFLIGALSLVGIPPLNGFFSKLLLFNALLE---SGFYLPALVLLIASAISLVGYF 446
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
155-395 |
1.04e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 79.01 E-value: 1.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 155 LIGIFYLMKKTGSMN---FYLMNNFMFNYDLLYFCLLCAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGG 228
Cdd:PRK12662 177 LIGIGFLYAITGTLNmgdMFLIIQDLPTNRAIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMI 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 229 YGLLRVI-----SFLQLMNLKYSFIWISISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTL 303
Cdd:PRK12662 257 YLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAY 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 304 MIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPPTLNLLGEISLLNSIV-SWSWISMI 382
Cdd:PRK12662 337 IVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLV 416
|
250
....*....|...
gi 2062575403 383 MLSLLSFFSAAYT 395
Cdd:PRK12662 417 VLLVGSGLSVIYV 429
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
110-362 |
4.90e-15 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 77.24 E-value: 4.90e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 110 FMFYLFFESSLIPTLFLILGWGYQPERLQAG-VYLL---FYTLLVslpmLIGIFYLMKKTGSMNFYLMNNFM---FNYDL 182
Cdd:PRK06521 136 FSFLVAWETMSLSSWFLVIANHREAEIRRAGfLYLLmahAGALAI----LLAFGLLARESGSYDFAAMRAAHlspFWASL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 183 LYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRV-ISFLQLMNLKYSFIWISISLVGGVLVS 261
Cdd:PRK06521 212 VFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALGAISAVLGV 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 262 LVCLRQTDLKSLIAYSSVAHMGIVLAGL-LTMTY----------WGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSL 330
Cdd:PRK06521 292 LYALAEHDLKRLLAYSTIENIGIIFVGLgLAMVFiaygmpllaaLALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDM 371
|
250 260 270
....*....|....*....|....*....|..
gi 2062575403 331 LINKGLLNFMPaMTLWWFLLSSANMAAPPTLN 362
Cdd:PRK06521 372 EKLGGLIRRMP-WTAWAFLIGCLAISALPPLN 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-398 |
2.30e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 75.13 E-value: 2.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 109 LFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNF----YLMNNFMFNYDLLY 184
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaylaVKMSENPTVVAKIA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 185 FCLLCA-FLVKMPMFLVHLWLPKAHVEAPVSGSMILagIMLKLGG-YGLLRVISFLQLMNLKYSFI-WISI-----SLVG 256
Cdd:PRK08376 223 LALFIAgLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAINLATVgWVIIilgclTMFV 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 257 GVLVSLVclrQTDLKSLIAYSSVAHMGIVLAGL---------LTMTYWG---LCGSYTLMIAHGLCSSGLFCLANVSYER 324
Cdd:PRK08376 301 GVAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgvglaalgdPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYE 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 325 LGSRSLLINKGLLNFMPaMTLWWFLLSSANMAAPPTLN------LLGEIS-LLNSIVSWSWISMIMLSLLSFFSAAYTLY 397
Cdd:PRK08376 378 TGTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFNgfaskwLIYESSaLFNPILGVIAMIGSVLTLASFVKVFHTAF 456
|
.
gi 2062575403 398 L 398
Cdd:PRK08376 457 F 457
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-324 |
5.74e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 73.45 E-value: 5.74e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 103 TFSSMSLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNfmfnYDL 182
Cdd:PRK07234 110 AFVCADLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLAT----ADP 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 183 LYFCLLCA-FLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVIsflqlmnLKYSFIWISISLVGG---V 258
Cdd:PRK07234 185 EAFALIALgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA-------LDVPGLDLIVRIFGVgtaL 257
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2062575403 259 LVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTmtywglCGSYTLmiAHGLCSSGLFCLANVSYER 324
Cdd:PRK07234 258 LGVLFALLEKDLKRMLAFSTISQLGFILAAPLV------GGLYAL--AHGLVKSTLFLCAGALPSR 315
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
187-387 |
7.92e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.96 E-value: 7.92e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 187 LLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLR--VISFLQLMNLKYSFIWISISLVGGVLVSLVC 264
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 265 LRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAmT 344
Cdd:PRK06458 300 LRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPL-T 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2062575403 345 LWWFLLSSANMA-APPTLNLLGEISLLNSIVSWS-WISMIMLSLL 387
Cdd:PRK06458 379 GWGLMLGALAIAgMPPFGVFISEFLILTAGLARGpLLIAILLLLL 423
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-370 |
9.73e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.00 E-value: 9.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 103 TFSSMSLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYD- 181
Cdd:PRK12665 127 AFLAGDLFNLYVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPs 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 182 ----LLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFL----QLMNLkysFIWISI- 252
Cdd:PRK12665 206 gtrtALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLfpggGLDTL---LMVVALl 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 253 SLVGGVLVSLVclrQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLI 332
Cdd:PRK12665 283 TMVVGILGAIA---QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRR 359
|
250 260 270
....*....|....*....|....*....|....*....
gi 2062575403 333 NKGLLNFMPAMTLwWFLLSSANMAA-PPTLNLLGEISLL 370
Cdd:PRK12665 360 LGGLAKASPLLAV-LFFVPALNLGGiPPFSGFIGKVALL 397
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
187-398 |
1.24e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 69.40 E-value: 1.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 187 LLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNL--KYSFIWISISLVGGVLVSLVC 264
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAaeQFSNVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 265 LRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMT 344
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2062575403 345 LWWFLLSSANMAAPPTLNLLGEISLLNSIVSWS-WISMIMLSLLSFFSAAYTLYL 398
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISvWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
194-370 |
3.30e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 68.53 E-value: 3.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 194 KMPMFLVHLWLPKAHVEA-PVSgSMILAGIMLKLGGYGLLRvisFLQLM--NLKYSFIWISISLVGGVLVSLVCLRQTDL 270
Cdd:PRK12650 221 KSAQFPFHFWLPEAMAAItPVS-AFLHAAAVVKAGIYLLLR---FSPVFhdVAVWNWLLIIVGMITALMGAVFAVQKTDL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 271 KSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPaMTLWWFLL 350
Cdd:PRK12650 297 KKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTI 375
|
170 180
....*....|....*....|.
gi 2062575403 351 SSANMAA-PPTLNLLGEISLL 370
Cdd:PRK12650 376 AALSMAAvPPLFGFVSKEGML 396
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-87 |
4.49e-11 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 59.46 E-value: 4.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 1 MLKIIFFLLFLLPVCFINNMYWM-----VQIMLFFIGFIFLMMNNFMNYWSEISYFLGCDMLSYGLVLLSLWICSLMLLA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLwttstLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90
....*....|..
gi 2062575403 76 SESVNKYNNYKN 87
Cdd:pfam01059 81 SQKHLKSEPNNR 92
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-401 |
1.92e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 62.53 E-value: 1.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 50 YFLGCDMLSYGLVLLS----LWICSLMLLASESVNKYNNYKNLFLLNIVILLLLLVLTFSSMSLFMFYLFFESSLIPTLF 125
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLligfLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 126 LIlGWGYQPERLQAGV-YLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYDLLYFCLLCAFLVKMPMFLVHLWL 204
Cdd:PRK06589 155 LI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 205 PKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFL----QLMNLKYSFIW-ISISLVGGVLVSLVCLRQTDLKSLIAYSSV 279
Cdd:PRK06589 234 PAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIfglsYLQRIFAEFNWlIFIPIVSIFYSSLKALKTDNIKKILAYSTI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 280 AHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMTLWWFLLSSANMAAPP 359
Cdd:PRK06589 314 SQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2062575403 360 TLNLLGEISLL-----NSIVSWSWISMIMLSLLSFFSAAYTLYLYSF 401
Cdd:PRK06589 394 FSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSS 440
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
111-362 |
4.72e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 61.69 E-value: 4.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 111 MFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIG--IFYLMKKTGSMNFYLMNNFMFNYDLLY---- 184
Cdd:PRK12646 134 LMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGfiMLYIMTGTNNITEILGQADHIKNHGLFipmi 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 185 FCLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQLMNLkYSFIWISISLVGGVLVSLV 263
Cdd:PRK12646 214 FMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLGLSNM-YIYIVTFVGLITMLFGSIT 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 264 CLRQTDLKSLIAYSSVAHMGIVLA------GLLTMTYWGLCGSYTL--------MIAHGLCSSGLFCLANVSYERLGSRS 329
Cdd:PRK12646 292 ALKQWDLKGILAYSTISQLGMIMAmvgiggGYAQHQQDAIASIYVFvlfaalfhLMNHAIFKCALFMGVGIIDHEAGTRD 371
|
250 260 270
....*....|....*....|....*....|...
gi 2062575403 330 LLINKGLLNFMPAMTLwWFLLSSANMAAPPTLN 362
Cdd:PRK12646 372 IRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-421 |
1.07e-09 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 60.17 E-value: 1.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 187 LLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLKYSFIW--ISISLVGGVLVSLVC 264
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKlvIIMATLTVFFAELSA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 265 LRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMT 344
Cdd:PRK08377 292 LRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTA 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2062575403 345 LWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLL-SFFSAAYTLYLYsfsqHGKLFSGvysfSGGKIRE 421
Cdd:PRK08377 372 LALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGaSVVEAVYYFRLI----HTMWFKG----EGERIRE 441
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-397 |
6.05e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 58.40 E-value: 6.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 109 LFMFYLFFEsslIPTLFLILGWGYQPER-------LQAgvylLFYTLLVSLPMLIGIFYLMKKTGSmnfYLMNNFMFN-- 179
Cdd:PRK12644 128 LLLLYVFWE---LTTVLSFLLIGHYAERaasrraaLQA----LLVTTAGGLAMLVGIIILGQAAGT---YRLSELLADpp 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 180 ----YDLLYFCLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRvisflqlMNLKYSFI--WISI 252
Cdd:PRK12644 198 tgpaVSVAVVLILVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVAR-------LAPGFADVpvWRPT 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 253 SLVGGVLVSLV----CLRQTDLKSLIAYSSVAHMG--IVLAGLLT--MTYWGLcgsyTLMIAHGLCSSGLFCLANVSYER 324
Cdd:PRK12644 270 VLVLGLATMLLggwrALRQHDLKLILAYGTVSQLGflTVLVGIGTrdAALAGL----AMLLAHALFKAALFLVVGIIDHS 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 325 LGSRSLLINKGLLNFMPAMtLWWFLLSSANMAA-PPTLNLLGEISLLNSIV------SWSWISMIMLSLLSFFSAAYTLY 397
Cdd:PRK12644 346 TGTRDIRKLSGLGRRQPVL-AVVAALAAASMAGlPPLLGFVAKEAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-330 |
2.03e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 56.11 E-value: 2.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 109 LFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNF--------YLMNNFMFNy 180
Cdd:PRK12663 130 LFNLYVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMahiamrlnDMGDTATLT- 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 181 dLLYFCLLCAFLVKMPMFLVHlWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFL-----QLMNLKYSFIWIsISLV 255
Cdd:PRK12663 208 -TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqerELLHPLLATMAA-ITMV 284
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2062575403 256 GGVLVSLVclrQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSL 330
Cdd:PRK12663 285 IGALGALA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSL 356
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-393 |
3.65e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 52.61 E-value: 3.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 106 SMSLFMFYLFFESSLIPTLFLIlgwGYQPER-------LQAgvylLFYTLLVSLPMLIGIFYLMKKTGSMN---FYLMNN 175
Cdd:PRK12647 114 SDNLITLFVFWELTSITSFLLI---GFNHEReaarraaLQA----LLVTGGGGLALLAGLILLGNVTGTYSlseLLASGD 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 176 FMFN---YDLLYFCLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRvisflqlMN--LKYSFIW 249
Cdd:PRK12647 187 VIREhplYLAILLLVLGGAFTKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR-------LNpvLGGTPLW 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 250 -ISISLVGG---VLVSLVCLRQTDLKSLIAYSSVAHMGIV--LAGLLTMTYWGLCGSYtlMIAHGLCSSGLFCLANVSYE 323
Cdd:PRK12647 259 qTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLvmLLGLGSELAIKAAVLF--LVAHSLYKGALFMVAGIIDH 336
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2062575403 324 RLGSRSLLINKGLLNFMPaMTLWWFLLSSANMAA-PPTLNLLGEISLLNSIVSWSWISMImLSLLSFFSAA 393
Cdd:PRK12647 337 ETGTRDITKLGGLRRAMP-ITAAAALLAALSMAGlPPLFGFLAKELIYEALLEAPLWSLI-LTVAAVLGNA 405
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-397 |
3.81e-07 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 52.28 E-value: 3.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 106 SMSLFMFYLFFESSLIPTLFLIlGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYDLLYF 185
Cdd:PRK06525 132 SSTLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVF 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 186 C-LLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQLMNLKYSFIWISISLVGGVLVSLV 263
Cdd:PRK06525 211 LgILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 264 CLRQTDLKSLIAYSSVAHMGIVLAGLLTMTY---WGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFM 340
Cdd:PRK06525 290 YLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKL 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2062575403 341 PAMTLWWFLLSSANMAAPP------TLNLLGEISLLNSIVSWSWISMIMLSLLSFFSAAYTLY 397
Cdd:PRK06525 370 PLVGVGFCVAALAITGVPPfngffsKFPIFAAGFELSVEYWILLPAMVLLLIESVASFAWFLR 432
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
154-394 |
6.45e-07 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 51.27 E-value: 6.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 154 MLIGIFYLMKKTGSMNFYLMNNFMFNYD----LLYFCL---LCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILA------ 220
Cdd:COG1007 169 LLYGISLLYGATGSLNLAGIAAALAAGGanspLLLLGLvlvLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAtapkia 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 221 --GIMLKLGGYGLLRVISFLQLMnlkysFIWISI-SLVGGvlvSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGL 297
Cdd:COG1007 249 afAALLRLLVEAFPGLAADWQLL-----LAVLAVlSMTVG---NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGV 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 298 CGSYTLMIAHGLCSSGLF-CLANVSYERLGSRSLLINKGLLNFMP----AMTLwwFLLSSANMaaPPTLNLLGEISLLNS 372
Cdd:COG1007 321 SAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPllalAMTI--FLLSLAGI--PPTAGFFGKFYVFSA 396
|
250 260
....*....|....*....|....
gi 2062575403 373 IVS--WSWISMIMLsLLSFFSAAY 394
Cdd:COG1007 397 AVEagLYWLAVIAV-LNSVISAYY 419
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
200-362 |
1.60e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 50.21 E-value: 1.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 200 VHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRvisfLQLMNLKYSFIWISISLVGGVLVSLV----CLRQTDLKSLIA 275
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILT----LSLLGGNAPLWWGVALLVLGMITAFVgglyALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 276 YSSVAHMGIVLAGL-----------LTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLNFMPAMT 344
Cdd:PRK08042 275 YHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170
....*....|....*...
gi 2062575403 345 LwWFLLSSANMAAPPTLN 362
Cdd:PRK08042 355 I-AMLVGLMAMAALPPLN 371
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
149-315 |
1.89e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 49.82 E-value: 1.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 149 LVSLPMLIGIFYLMKKTGSMNFYLM----NNFMFNYDLLYF---CLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAG 221
Cdd:PRK05777 165 LASGFLLYGMSLLYGATGSLSFAGIakalADGSGNSLLLLFglvFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 222 IMlKLGGYG-LLRV--ISFLQLMNLKYSFIWIsISLVGGVLVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLC 298
Cdd:PRK05777 245 AP-KIAAFAvLLRLlvVAFGGLSEDWQQVLAI-IAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYS 322
|
170
....*....|....*..
gi 2062575403 299 GSYTLMIAHGLCSSGLF 315
Cdd:PRK05777 323 AVLFYLLAYLFMTLGAF 339
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
170-393 |
5.73e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.63 E-value: 5.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 170 FYLMNNFMFNYDLLYFCLLCA---FLVKMPM--FLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMNLK 244
Cdd:PRK06459 144 FIISGTTNFSYLPSPVPLILAsfgFIIKMGMmpFLVSEWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIG 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 245 YSFIWI----SISLVGGVLVSLVClrqTDLKSLIAYSSVAHMGIVLA--GLLTMTY--------WGLCGSYTLMIAHGLC 310
Cdd:PRK06459 224 YFGLTIlaigAFSILFGALYAYVS---ENVKGLLAFSTIENNGAILValGLYMVTKqlitsiehFSLITVILYSFAHSVA 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 311 SSGLFCLANVSYERLGSRSLLINKGLlnfmpaMTLWWFLLSSANMAAPPTLNLLGEISLLNSIVSWSWISMIMLSLLSFF 390
Cdd:PRK06459 301 KTGLFLSSGLQEKQSITYSKKIRNRW------IELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVLHNVISILFIV 374
|
...
gi 2062575403 391 SAA 393
Cdd:PRK06459 375 TGA 377
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
108-399 |
6.96e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 48.22 E-value: 6.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 108 SLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFN------YD 181
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTilssplLT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 182 LLYFCLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQLMNLKYSFIwISISLVGGVLV 260
Cdd:COG1009 212 LILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFALSPVWLTVV-AIIGAITALFA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 261 SLVCLRQTDLKSLIAYSSVAHMGIVLAGLltmtywGLcGSYT----LMIAHGLCSSGLFCLANVSYERLGSRSLLINKGL 336
Cdd:COG1009 290 ALIALAQTDIKRVLAYSTVSQLGYMFLAL------GV-GAYVaalfHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGL 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2062575403 337 LNFMPAmTLWWFLLSSANMAA-PPTLNLLGEISLLNSIV---SWSWISMIMLSLLSFFSAAYTLYLY 399
Cdd:COG1009 363 RKKMPI-TAITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
182-315 |
3.66e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 46.01 E-value: 3.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 182 LLYFCLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMlklggygllRVISFLQLMNLKY-SFIWISISLVGGVLV 260
Cdd:MTH00198 300 LGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIP---------KFTVYILLTSLVItSKLLLSVAIISLVVG 370
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2062575403 261 SLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLF 315
Cdd:MTH00198 371 AFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
109-288 |
7.98e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 44.89 E-value: 7.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 109 LFMFYLFFESSLIPTLFLILGWGyQPERLQAGV-YLLFYTLLVSLpMLIGIFYLMKKTGSMNFYLMNNFMFNYDLLyfcL 187
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARG-TKAAVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFGAIAGLGGTAAWL---I 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 188 LCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGIMLKLGGYGLLRVISFLQLMnlkysfIWI-SISLVGGVLVSLVclr 266
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL------IYIgAAMAVYGVFFALL--- 260
|
170 180
....*....|....*....|..
gi 2062575403 267 QTDLKSLIAYSSVAHMGIVLAG 288
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAG 282
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-318 |
4.58e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.53 E-value: 4.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 109 LFMFYLFFESSLIPTLFLILGwGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGSMNFYLMNNFMFNYD------- 181
Cdd:PRK12666 131 LFNLFVFFEVLLAASYGLLLH-GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPaadrall 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 182 ----LLyfcLLCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLGGYGLLRVISFLQLMNLKYSFIWISISLVGG 257
Cdd:PRK12666 210 eagaAL---LLVVFLIKAAMWPLNFWLPPAYAAASAPVAALFA-IMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPG 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2062575403 258 VLVSLVC-----LRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLA 318
Cdd:PRK12666 286 GLATLAFgaigvLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
104-362 |
7.73e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.12 E-value: 7.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 104 FSSMSLFMFyLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLPMLIGIFYLMKKTGS------MNFYLMNNFM 177
Cdd:PRK12649 129 FSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTydiatiLQDSELIENI 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 178 FNYDLLYFCLLCAFL---VKMPMFLVHLWLPKAhVEAPVSGSMIL-AGIMLKLGGYGLLRVISFLQlmNLKYSFIWIS-I 252
Cdd:PRK12649 208 KGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFS--GTEAWFILVSgT 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 253 SLVGGVLVSLVCLRQTDLKSLIAYSSVAHmgivLAGLLTMTYW--------GLCGSYTLMIAHGLCSSGLFCLANVSYER 324
Cdd:PRK12649 285 GMITMVLAGFLAFRQTDIKAILAYSTISQ----LAYLMTMYGYttyhepglGVAAATFHLLNHATFKACLFLVAGIVAHE 360
|
250 260 270
....*....|....*....|....*....|....*...
gi 2062575403 325 LGSRSLLINKGLLNFMPaMTLWWFLLSSANMAAPPTLN 362
Cdd:PRK12649 361 AATRDIRKLGGLRKEMP-ITFIVASIAALAMAGIPPLN 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
109-398 |
9.25e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 41.56 E-value: 9.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 109 LFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLLVSLpMLIGIFYLMKKTGSMNFYLMNNFMFNyDLLYFCLL 188
Cdd:PRK06277 122 IFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDIHNALLV-NPTSPVIY 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 189 CAFLVKMPMFLVHLWLPKAHV-------EAPVSGSMILAG---IMLKLGGYGLLRVISFLQLMNLKYSFIwISISLVGGV 258
Cdd:PRK06277 200 GGLLLLIFGLLYGSGLPPFHTiksdiyaKAKPFGSALLQTfskFVLVALMLVIFKLFGGLSYFPSAQGVL-IALSVLAMV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 259 LVSLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSGLFCLANVSYERLGSRSLLINKGLLN 338
Cdd:PRK06277 279 FGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLP 358
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2062575403 339 FMPAMTLwWFLLSSANMAAPPTLN------LLGEISLLNSIVSWSwISMIMLSLLSFFSAAYTLYL 398
Cdd:PRK06277 359 VMPVVAF-MVLCAKLAISGVPPFNgfqsklMLAQAAMQANMPELA-IIMIIVSIGTFVSMMKAFYL 422
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
165-315 |
1.90e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 40.32 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 165 TGSMNF----YLMNNFMFNYDLLYFCL---LCAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAgIMLKLGGYGLLRVISF 237
Cdd:TIGR01770 180 TGSLNFedllLFLSNGMLNISLLLLGIvliLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS-IVPKIAIFAVFLRLFL 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 238 LQLMNlkYSFIWISISLVGGVLV----SLVCLRQTDLKSLIAYSSVAHMGIVLAGLLTMTYWGLCGSYTLMIAHGLCSSG 313
Cdd:TIGR01770 259 YILFG--FSEAWQIFLAIIAFLSmligNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLG 336
|
..
gi 2062575403 314 LF 315
Cdd:TIGR01770 337 AF 338
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
106-289 |
2.91e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.91 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 106 SMSLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVY-LLFYTLLVSLPMLIGIFYLMKKTGSMNFY--------LMNNF 176
Cdd:PRK12645 129 SDNLIVLYLFWELTSISS-FLLISYWYEREASRYGAQkSMLITVFGGLSMLGGFILLYIMTGSFSIRemianadeIQNSP 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 177 MFNYDLLYFcLLCAFlVKMPMFLVHLWLPKAhVEAPV-------SGSMILAGIMLklggygllrVISFLQLMNLKYSFIW 249
Cdd:PRK12645 208 LFIPAMILI-LLGAF-TKSAQFPFYIWLPDA-MEAPTpvsaylhSATMVKAGIYL---------VARFTPIFAGSQVWFW 275
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2062575403 250 IsISLVGGVLV---SLVCLRQTDLKSLIAYSSVAHMGIVLAGL 289
Cdd:PRK12645 276 T-VTLVGLITLfwgSLNAVKQTDLKGILAFSTVSQLGLIMSLL 317
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
154-283 |
4.96e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.29 E-value: 4.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 154 MLIGIFYLMKKTGSMNFYLMNNFMFNYDLLYFCLLCAFLV-----KMPMFLVHLWLPKAhVEAPVSGS-MILAGIMLKLG 227
Cdd:MTH00020 178 LLLAMFLLWDRFGSLDFSSVFNMVVSAPSSDITLICLFLFigavgKSAQLGLHTWLPDA-MEGPTPVSaLIHAATMVTAG 256
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575403 228 GYGLLRVISFLQLMnlkySFIWISISLVGGVLVSL---VCLRQTDLKSLIAYSSVAHMG 283
Cdd:MTH00020 257 VFLLIRSSPLFEQA----PLALIIVTIVGSLTVFFaatVGLVQNDLKKVIAYSTCSQLG 311
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
186-286 |
7.95e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.53 E-value: 7.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575403 186 CLLCAFLVKMPMFLVHLWLPKAhVEAPVSGSMILAGIMLKLGGYGLLRvisFLQLMNLKYSFIWIsISLVGG---VLVSL 262
Cdd:PRK08168 205 LLVLAVILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLGGFVLIR---FAPLLEQAPPARWL-LVLVGLataVLAGL 279
|
90 100
....*....|....*....|....
gi 2062575403 263 VCLRQTDLKSLIAYSSVAHMGIVL 286
Cdd:PRK08168 280 VMLTRISIKVRLAWSTVAQMGFML 303
|
|
| |
