|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
4-568 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 681.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 4 LSICSISFLNLISISMTCFFLSLYFLLNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSS 83
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 84 DLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLN 163
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 164 YGSWNYVFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANS 243
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 244 WLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMN 323
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 324 NSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYSM 403
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 404 TGDLNCMSLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWLIFSSPYMICLPLYMKLLTLFTCIFGGLFGYLISLSKLFTL 483
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 484 NKSLIFYNLSMFLSSMWFMPYMSTYGIIFYPLNYGQIVSKSFDQGWSEYFGGQHLYQKLMNYSQILFLMHNNNLKIYLLL 563
Cdd:MTH00165 481 LKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
....*
gi 2062575555 564 FVFWV 568
Cdd:MTH00165 561 FLLWM 565
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
4-566 |
5.33e-165 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 481.65 E-value: 5.33e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 4 LSICSISFLNLISISMTCFFLSLYFLLNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSS 83
Cdd:MTH00151 1 LKMSSLSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 84 DLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLN 163
Cdd:MTH00151 81 DPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 164 YGSWNYVFylevMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NILLAN 242
Cdd:MTH00151 161 LGHWSILS----MWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFfPFLSSS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 243 SWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNM 322
Cdd:MTH00151 237 SGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 323 NNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYS 402
Cdd:MTH00151 317 SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCL 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 403 MTGDLNCMSLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWLIFSSPYMICLPLYMKLLTLFTCIFGGLFgyliSLSKLFT 482
Cdd:MTH00151 397 VWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFL----SFGFWDS 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 483 LNKSLIFYNLSMFLSSMWFMPYMSTYGIIFYPLNYGQIVSKSFDQGWSEYFGGQHLYQKLMNYSQILFLMHNNNLKIYLL 562
Cdd:MTH00151 473 GFSSSKMVKLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIG 552
|
....
gi 2062575555 563 LFVF 566
Cdd:MTH00151 553 LILL 556
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
22-566 |
5.51e-161 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 471.44 E-value: 5.51e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 22 FFLSLYFLLNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSM 101
Cdd:MTH00209 17 FLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSM 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 102 MLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNyVFYLEVMQNEfe 181
Cdd:MTH00209 97 NFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNWN-IFYLNFNSNL-- 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 182 MMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWLGQLLLLLS-GLTMFMA 260
Cdd:MTH00209 174 GSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLgSLTTLMA 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 261 GLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPL 340
Cdd:MTH00209 254 SMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPI 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 341 TSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYSMTGDLNCMSLNMLNDEGW 420
Cdd:MTH00209 334 TSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 421 VMLRGMMGLLIMSIIGGSMLNWLIFSSPYMICLPLYMKLLTLFTCIFGGLFGYLISLSKLFTLNKSLIFYnlsmFLSSMW 500
Cdd:MTH00209 414 LNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVNY----FLSQMW 489
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2062575555 501 FMPYMSTYGIIFYPLNYGQIVSKSFDQGWSEYFGGQHLYQKLMNYSQILFLMHNNNLKIYLLLFVF 566
Cdd:MTH00209 490 FLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMML 555
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-563 |
8.23e-155 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 455.76 E-value: 8.23e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 1 MKYLSICSISFLNLISISMTCFFLSLYFLLNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEY 80
Cdd:MTH00207 1 LRMFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 81 MSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAW 160
Cdd:MTH00207 81 MQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 161 MLNYGSWNYVFylevMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-NIL 239
Cdd:MTH00207 161 TLNQGHWSITN----MWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFyPFL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 240 LANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAII 319
Cdd:MTH00207 237 SSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 320 HNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLI 399
Cdd:MTH00207 317 HSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFT 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 400 FYSMTGDLNCMSLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWLIFSSPYMICLPLYMKLLTLFTCIFGGLFGYLISlSK 479
Cdd:MTH00207 397 LAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFT-TP 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 480 LFTLNKSLIFYNLSMFLS-SMWFMPYMSTYGIIFYPLNYGQIVSKSFDQGWSEYFGGQHLYQKLMNYSQILFLMHNNNLK 558
Cdd:MTH00207 476 NITKTPLLINNPLSHFAScLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPN 555
|
....*
gi 2062575555 559 IYLLL 563
Cdd:MTH00207 556 NYLMM 560
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
15-566 |
2.54e-111 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 344.63 E-value: 2.54e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 15 ISISMTCFFLSLYFLLNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLV 94
Cdd:MTH00211 37 LSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 95 LMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTAL-SNRIGDVALLLAIAWML-NYGSWNYVFY 172
Cdd:MTH00211 117 LLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMVWLLlNLNSWEISQL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 173 LEVMQNEFEMMVigsLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWLGQLLLLL 252
Cdd:MTH00211 197 FILNLDLTLFLL---GLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 253 S-GLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLM 331
Cdd:MTH00211 274 LgALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKM 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 332 GGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYSMTGDLNCMS 411
Cdd:MTH00211 354 GGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 412 LNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWLIFSSPYMI-CLPLYMKLLTLFTCIFGGLFGYLISLSKLFTLNKSlify 490
Cdd:MTH00211 434 LSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTS---- 509
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2062575555 491 nLSMFLSSMWFMPYMSTYGIIFYPLNYGQIVS-KSFDQGWSEYFGGQHLYQKLMNYSQILFLMHNNNLKIYLLLFVF 566
Cdd:MTH00211 510 -TLSFSNMLGYYPPIIHRLLPKLSLKWGQTLStHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLL 585
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
19-564 |
1.93e-102 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 321.73 E-value: 1.93e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 19 MTCFFLSL----YFLLNNMIYFI-EWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIML 93
Cdd:MTH00004 41 KLAFLISLipltLFLNSGTESITtNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKY 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 94 VLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTA-LSNRIGDVALLLAIAWM-LNYGSWNyvf 171
Cdd:MTH00004 121 LLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMAWLaMTLNTWE--- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 172 yLEVMQNEFEMMVIGSL-VMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWLGQLLL 250
Cdd:MTH00004 198 -IQQLFSPTQTPTLPLLgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIC 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 251 LLS--GLTMFMAgLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDI 328
Cdd:MTH00004 277 LCLgaLTTLFAA-TCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDI 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 329 RLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYSMTGDLN 408
Cdd:MTH00004 356 RKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPR 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 409 CMSLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWLIF-SSPYMICLPLYMKLLTLFTCIFGGLFGY-LISLSKLFTLNKS 486
Cdd:MTH00004 436 TPPTTPINENTPTIINPITRLALGSILAGLLISSTILpTKTPPMTMPTTTKLAALIVTILGILLALeLSNMTTTLTPPKQ 515
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575555 487 LIFYNLSMFLSSMWFMPYMSTYGIIfypLNYGQ-IVSKSFDQGWSEYFGGQHLYQKLMNYSQILFLMHNNNLKIYLLLF 564
Cdd:MTH00004 516 NTLHNFSNQLAFFNPLTHRLLPMTL---LKSSQkIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSF 591
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
14-479 |
3.24e-101 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 319.02 E-value: 3.24e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 14 LISISMTCFFLSLYFL---LNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRF 90
Cdd:COG1009 34 AALAPLAAFVLSLLLFpavLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 91 IMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNY-GSWN 168
Cdd:COG1009 114 FAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIaGTLN 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 169 YVFYLEVMQNEFE---MMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANS-W 244
Cdd:COG1009 194 FSELLAAAPTILSsplLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSpV 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 245 LGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMnN 324
Cdd:COG1009 274 WLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-G 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 325 SQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFST-GLTVSYTFRLIFYSM 403
Cdd:COG1009 353 TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGaFLTAFYSFRLFFLVF 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 404 TGDLNCMSLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWL---------IFSSPYMICLPLYMKLLTLFTCIFGGLFGYL 474
Cdd:COG1009 433 FGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIALGYL 512
|
....*
gi 2062575555 475 ISLSK 479
Cdd:COG1009 513 LYLKR 517
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
8-564 |
3.46e-96 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 306.51 E-value: 3.46e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 8 SISFLNLISIsMTCFFLSLYFLLN-NMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLN 86
Cdd:MTH00208 58 SISLLKTLAF-LSLINLLIWILLGcPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPN 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 87 INRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTA-LSNRIGDVALLLAIAW-MLNY 164
Cdd:MTH00208 137 KNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLINF 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 165 GSWNY--VFYLEVMQNEF-EMMVIGSLvmLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLA 241
Cdd:MTH00208 217 NSWNLneILSLNNSNSFLiNILLFGIL--LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 242 NS-WLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIH 320
Cdd:MTH00208 295 NSpWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIH 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 321 NMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIF 400
Cdd:MTH00208 375 SLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIF 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 401 YSMTGDLNCMSLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWLIFSSPyMICLPLYMKLLTLFTCIFGGLFGYLIslskL 480
Cdd:MTH00208 455 FCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLP-PLTLPLILKSLPLIVTIIGAAFSFSF----L 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 481 FTLNKSLIFYNLSMFLSSMWFMPYMSTYGIIFYPLNYG-QIVSKSFDQGWSEYFGGQHLYQKLMNYSQILFLMHNNNLKI 559
Cdd:MTH00208 530 LSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSlFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQ 609
|
....*
gi 2062575555 560 YLLLF 564
Cdd:MTH00208 610 YLLSS 614
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
20-566 |
5.23e-95 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 302.21 E-value: 5.23e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 20 TCFFLSLYFLLNNMIYFIE-----WEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLV 94
Cdd:MTH00066 40 TAFFISLIPLMIFINQGLEsittsFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 95 LMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLAIAW-MLNYGSW--NYV 170
Cdd:MTH00066 120 LIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWelQQI 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 171 FylevMQNEFEMMVIGSLVmLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWLGQLLL 250
Cdd:MTH00066 200 F----LLNDNSTLPLLGLI-LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIC 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 251 LLS--GLTMFMA--GLGANfefDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQ 326
Cdd:MTH00066 275 LCLgaLTTLFTAacALTQN---DIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQ 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 327 DIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYSMTGD 406
Cdd:MTH00066 352 DIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKF 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 407 LNCMSLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWLIFSSPYMI-CLPLYMKLLTLFTCIFGGLFGYLISLSKLFTLNK 485
Cdd:MTH00066 432 PRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPK 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 486 SLIFynlsMFLSSMWFMPYMSTYGIIFYPLNYGQ-IVSKSFDQGWSEYFGGQHLYQKLMNYSQILFLMHNNNLKIYLLLF 564
Cdd:MTH00066 512 TKMH----SFSNLLAFFPTIIHRLSPKTNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLF 587
|
..
gi 2062575555 565 VF 566
Cdd:MTH00066 588 LI 589
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
19-468 |
1.06e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 288.67 E-value: 1.06e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 19 MTCFFLSL-----YFLLNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIML 93
Cdd:MTH00108 41 SYAFIISLiptmmFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKY 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 94 VLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTA-LSNRIGDVALLLAIAW-MLNYGSWNYVF 171
Cdd:MTH00108 121 LLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNLNSWDLQQ 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 172 YLEVMQNEFEMMVIGSLvmLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWLGQLLLL 251
Cdd:MTH00108 201 IFMLNPNNSNLPLMGLL--LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTL 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 252 LS--GLTMFMAgLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIR 329
Cdd:MTH00108 279 CLgaITTLFTA-ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 330 LMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYSMTGDLNC 409
Cdd:MTH00108 358 KMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRF 437
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2062575555 410 MSLNMLNDEGWVMLRGMMGLLIMSIIGGSML--NWLIFSSPYMIcLPLYMKLLTLFTCIFG 468
Cdd:MTH00108 438 PPLITINENNPLLINPIKRLLLGSIFAGFLIsnNIPPTTIPQMT-MPLYLKLTALAVTILG 497
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
10-503 |
4.13e-87 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 281.86 E-value: 4.13e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 10 SFLNLISISMTCFFLSLYFLLNNMIYFIE--WEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNI 87
Cdd:TIGR01974 34 IGSVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGY 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 88 NRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNY-G 165
Cdd:TIGR01974 114 SRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYfG 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 166 SWNY--VFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLAN 242
Cdd:TIGR01974 194 TLNFqeVFALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSpLFELS 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 243 SWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNM 322
Cdd:TIGR01974 274 PTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 323 NNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYS 402
Cdd:TIGR01974 354 HHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMV 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 403 MTGDLNCMSLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWL-------IFSSPYMIC----LPLYMKLLTLFTCIFGGLF 471
Cdd:TIGR01974 434 FHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLfeflkgvLPTSAEPALehhhVPALEIWSPTAVAILGILL 513
|
490 500 510
....*....|....*....|....*....|...
gi 2062575555 472 GYLISLSKLFTLNKSLIFYN-LSMFLSSMWFMP 503
Cdd:TIGR01974 514 AYLLYLGNPTLPAKIAQRHSgLYRLLLNKWYFD 546
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
39-479 |
1.84e-86 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 280.89 E-value: 1.84e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 39 WEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWD 118
Cdd:PRK06590 66 WTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 119 GLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNY-GSWNY--VFYLEVMQNEFE---MMVIGSLVML 191
Cdd:PRK06590 146 GVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEfGSLNYdeVFAAAPQFFGLGwsaLTLICLLLFI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 192 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLANSWLGQLLLLLSGLTMFMAGLGANFEFDL 270
Cdd:PRK06590 226 GAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSpLFELSPEALLFVAIVGAVTALFAAFIGLVQTDI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 271 KKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNL 350
Cdd:PRK06590 306 KRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTL 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 351 ALCGMPFLAGFYSKDMILEMVMISNvNFFSFFLYFFSTGLTVSYTFRLIFYSMTGDlncmslNMLNDE-----GWVMLRG 425
Cdd:PRK06590 386 ALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLVFHGK------EKEKIHhphesPAVMTLP 458
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2062575555 426 MMGLLIMSIIGG-----SMLNWLIFSSPY-----MICLPLYMKLLTLFTCIFGGLFGYLISLSK 479
Cdd:PRK06590 459 LIVLAVLSVFAGalivpPFLGVLPLTTELahgeaEHHLPVWVALLPLVVALAGIALAWLLYLKK 522
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
19-566 |
5.80e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 260.53 E-value: 5.80e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 19 MTCFFLSL----YFLLNNMIYFIE-WEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIML 93
Cdd:MTH00137 45 KTAFFVSLlplfLFLNQGAETIITnWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKY 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 94 VLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTA-LSNRIGDVALLLAIAWML-NYGSWNyvf 171
Cdd:MTH00137 125 LLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWE--- 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 172 ylevMQNEFEM-----MVIGSL-VMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWL 245
Cdd:MTH00137 202 ----IQQIFALskdfdLTLPLLgLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQT 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 246 GQLLLLLS--GLTMFMA--GLGANfefDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHN 321
Cdd:MTH00137 278 ALTTCLCLgaLTTLFTAtcALTQN---DIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHS 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 322 MNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFY 401
Cdd:MTH00137 355 LNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFF 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 402 SMTGDLNCMSLNMLNDEGWVMLRGMMGLLIMSIIGGSML--NWLIFSSPYMiCLPLYMKLLTLFTCIFGGLFGY-LISL- 477
Cdd:MTH00137 435 VSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLItsNILPLKTPVM-TMPPLLKLAALIVTILGLLIALeLASLt 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 478 SKLFTLNKSLIFYNLSMFLSsmwFMPYMSTYGIIFYPLNYGQ-IVSKSFDQGWSEYFGgqhlyQKLMNYSQILFLMHNNN 556
Cdd:MTH00137 514 NKQFKPTPTLPPHHFSNMLG---FFPAIIHRLTPKLNLTLGQtIATQMVDQTWLEKTG-----PKGIASLQLPLITTTSN 585
|
570
....*....|....*
gi 2062575555 557 L-----KIYLLLFVF 566
Cdd:MTH00137 586 IqqgmiKTYLTLFLL 600
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
9-564 |
1.48e-73 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 246.14 E-value: 1.48e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 9 ISFLNLISISMTCFFLSLYFLLN-NMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNI 87
Cdd:MTH00020 31 LTSSCLIISLSWSFLIFYEILFNsSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHI 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 88 NRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLN-YG 165
Cdd:MTH00020 111 PRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 166 SWNY--VFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANS 243
Cdd:MTH00020 191 SLDFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQA 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 244 WLGQLLLLLS-GLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNM 322
Cdd:MTH00020 271 PLALIIVTIVgSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHAL 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 323 NNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYS 402
Cdd:MTH00020 351 SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLT 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 403 MTGDLNCM--SLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWLIFS----SPYMIclPLYMKLLTLFTCIFGGLFGYLI- 475
Cdd:MTH00020 431 FLSNTNLKkaVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSfqitLPPIV--PLSIKLLPVFLSLGGIGLVIILy 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 476 -SLSKLFTLNKSLIFYNLSMFLSSMWFMPYMSTYGII--FYPLNYgQIVSKSFDQGWSEYFGGQHLYQKLMNYSQILFLM 552
Cdd:MTH00020 509 fYSSKTFRVPFSFIGRNSYTFLGSAWQFNYILNYFLIkkIWKGGH-LISYRTIDKGVLELVGPKGISNFLIILTQGLSSL 587
|
570
....*....|..
gi 2062575555 553 HNNNLKIYLLLF 564
Cdd:MTH00020 588 QSGLVFNYALVI 599
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
53-568 |
2.79e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 237.60 E-value: 2.79e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 53 FLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLV-IYF 131
Cdd:MTH00210 76 LQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 132 QNIKSYNAGMLTALSNRIGDVALLLAIAWMLN-YGSWNYVF---YLEVMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLP 207
Cdd:MTH00210 156 TRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTissLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 208 AAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWLGQLLLLLS-GLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM 286
Cdd:MTH00210 236 DAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILgALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 287 SILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDM 366
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 367 ILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYSMTGDLNCMSLNMLN--DEGWVMLRGMMGLLIMSIIGGSMLNWLI 444
Cdd:MTH00210 396 ILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGvhESSWNITFPLLLLAFGSIFVGYLGKEVV 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 445 FSSPYMICLPLYMKLLTLFTCIFGGLFGYLISLSKLFTLNKS------LIFYNLSMFLSSMWFMPYMSTYGIIFYPLNYG 518
Cdd:MTH00210 476 LSNVIPPIVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISrrgvsiRLYHVIYTFLNSAWQFNYVINHFIVKNIWKFG 555
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 2062575555 519 QIVS-KSFDQGWSEYFGGQHLYQKLMNYSQILFLMHNNNLKIYLLLFVFWV 568
Cdd:MTH00210 556 HLITyRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMIIFT 606
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
37-406 |
9.69e-66 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 226.83 E-value: 9.69e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 37 IEWevVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLG 116
Cdd:PRK07376 73 FEW--ASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVF 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 117 WDGLGLVSYCLVIYFQNIKSY-NAGMLTALSNRIGDVALLLAIA---WMLNygswnyVFYLEVMQNEFEMMV-------- 184
Cdd:PRK07376 151 WELVGMCSYLLVGFWYDRKGAaDAAQKAFVVNRVGDFGLLLGILglfWATG------SFDFDGIADRLSELVssgavsgw 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 185 ----IGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLanSWLGQLLLLLSGLTMFMA 260
Cdd:PRK07376 225 lallLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVF--EQFPAVMTVIAWTGAITA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 261 GLGANF---EFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNN--------SQDIR 329
Cdd:PRK07376 303 FLGASIaltQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMR 382
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2062575555 330 LMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISnvNFFSFFLYFFSTGLTVSYTFRLIFYSMTGD 406
Cdd:PRK07376 383 LMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMYFLTFEGE 457
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
14-514 |
4.16e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 210.93 E-value: 4.16e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 14 LISISMTCFFLSLYFLLNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIML 93
Cdd:MTH00095 2 NILIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 94 VLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNYGswnyvFYL 173
Cdd:MTH00095 82 LLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS-----YYF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 174 EVMQNEFEMMVIgsLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWLGQLLLLLS 253
Cdd:MTH00095 157 FSFSFFSSSMIL--MLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLIG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 254 GLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGG 333
Cdd:MTH00095 235 LFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 334 LSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFYSMtgdLNCMSLN 413
Cdd:MTH00095 315 NGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFF---LSFSKVV 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 414 MLNDEGWVMLRGMMGLLIMSIIGgsmLNWLIFSSPYMICLPLYMKLLTLFTCIFgglfgylislskLFTLNKSLIFYNLS 493
Cdd:MTH00095 392 NVYSSSVLMNFLSLMLVFFSVFF---LWWLNFNLLNLPSLFLYLDFYVPLFYLF------------MIMLFSFFFFKLLF 456
|
490 500
....*....|....*....|.
gi 2062575555 494 MFLSSMWFMPYMSTYGIIFYP 514
Cdd:MTH00095 457 KELKYKFFVDYFAKNVIYKLK 477
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-372 |
2.28e-56 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 191.37 E-value: 2.28e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 107 SPNLVSILLGWDGLGLVSYCLVIYF-QNIKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYL----EVMQNEFE 181
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 182 MMVIGSLVMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNILLANS--WLGQLLLLLSGLTMF 258
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSspFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 259 MAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGF---YKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLS 335
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....*..
gi 2062575555 336 IHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVM 372
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
16-370 |
9.80e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 196.72 E-value: 9.80e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 16 SISMTCFFLSLYFLLNNMIYFIE-WEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLV 94
Cdd:MTH00032 38 SSTLIALFLAYEVLINDAVVHIElYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 95 LMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQN-IKSYNAGMLTALSNRIGDVALLLAIAWM------LNYGSW 167
Cdd:MTH00032 118 SLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 168 NYVF---------YLEVMQNEFEM---MVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 235
Cdd:MTH00032 198 NGGSvgsgimdrgYYGGGAYESPLapfAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIR 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 236 -FNILLANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM-GFYKLAMFHLLTHALFKALLFM 313
Cdd:MTH00032 278 sFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFL 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2062575555 314 CAGAIIHNMN-NSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEM 370
Cdd:MTH00032 358 SAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
6-408 |
1.73e-51 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 188.56 E-value: 1.73e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 6 ICSISFLNLISISMtcfFLSLYFLL----NNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYM 81
Cdd:CHL00025 39 MWAFPSILLLSIVM---IFSLNLSIqqinGSSIYQYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYM 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 82 SSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLAIA- 159
Cdd:CHL00025 116 SHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGILg 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 160 --WMLnyGSW----------NYVFYLEVmqNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 227
Cdd:CHL00025 196 fyWIT--GSFefrdlfeifnNLIYNNEV--NLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVA 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 228 AGVYLLIR-FNILLANSWLGQLLLLLSGLTMFmagLGANFEF---DLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLT 303
Cdd:CHL00025 272 AGIFLVARlLPLFIVIPYIMNLISLIGIITAL---LGATLALaqkDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLIT 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 304 HALFKALLFMCAGAIIHNM--------NNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVMISn 375
Cdd:CHL00025 349 HAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWLY- 427
|
410 420 430
....*....|....*....|....*....|...
gi 2062575555 376 vNFFSFFLYFFSTGLTVSYTFRLIFYSMTGDLN 408
Cdd:CHL00025 428 -SPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLR 459
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
56-400 |
4.62e-47 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 177.16 E-value: 4.62e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 56 DWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIyfQNIK 135
Cdd:PRK12650 78 DALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGS 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 136 SYNAG-MLTALSNRIGDVALLLAIAWMLNY-GSWNyvfyLEVM-------QNEFEMMVIGSLVMLAAMTKSAQIPFSSWL 206
Cdd:PRK12650 156 GGEAGsIRTLILTFFGGLTLLAAVAIAATQtGTTS----LSGIlhsdvwaEKPGLTTVVAVLIAVAAFTKSAQFPFHFWL 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 207 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLAN-SWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLM 285
Cdd:PRK12650 232 PEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDvAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWI 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 286 MSILSMGF-YKL--AMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFY 362
Cdd:PRK12650 312 VATIGVGTpFALtaAVVHTLAHALFKSSLFMLIGVVDHQA-GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2062575555 363 SKDMILEMVMISNVNFFSFFLYFFSTGL----TVSYTFRLIF 400
Cdd:PRK12650 391 SKEGMLTAFLEAPGGNAGVVLLLVGAALgavfTFAYSARLVL 432
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
15-372 |
2.78e-46 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 174.26 E-value: 2.78e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 15 ISISMTCF--FLSLYFLLNN---MIYFIEWevvsLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINR 89
Cdd:TIGR00940 32 LAIPLVCFlyTLGLYPYTASggvLHYTIDW----VPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPN 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 90 FIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIY-FQNIKSYNAGMLTALSNRIGDVALLLAIAWM-LNYGSW 167
Cdd:TIGR00940 108 FYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYwHHRAHSRYGAQKSLTITVFGGLAMLGGLILLgKITGSF 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 168 NYVFYLE---VMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANS- 243
Cdd:TIGR00940 188 SIDAVIAsadAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTe 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 244 -WlGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMG------------FYKL----AMFHLLTHAL 306
Cdd:TIGR00940 268 aW-FWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGspsyhyqgddskIYALaavaAVFHLINHAT 346
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2062575555 307 FKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMVM 372
Cdd:TIGR00940 347 FKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAI 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-369 |
3.04e-46 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 168.02 E-value: 3.04e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 52 TFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYF 131
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 132 QNIKSYNAGMLTALSNRIGDVALLLAIAWM-LNYGSWNYVFYLEVMQ--NEFEMMVIGSLVMLAAMTKSAQIPFSSWLPA 208
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAelDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 209 AMA-APTPVSALVhSSTLVTAGVYLLIRFNILL----ANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLG 283
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLfgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 284 LMMSILSMGFYKL---AMFHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAG 360
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
....*....
gi 2062575555 361 FYSKDMILE 369
Cdd:COG0651 389 FVSKWLLLQ 397
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
394-568 |
4.15e-46 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 160.41 E-value: 4.15e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 394 YTFRLIFYSMTGDLNCMSLNMLNDEGWVMLRGMMGLLIMSIIGGSMLNWLIFSSPYMICLPLYMKLLTLFTCIFGGLFGY 473
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 474 LISLSKLFTLNKSLIFyNLSMFLSSMWFMPYMSTYGIIFYPLNYGQIVSKSFDQGWSEYFGGQHLYQKLMNYSQILFLMH 553
Cdd:pfam06455 81 ELSNLSNKQLKKSLNF-NLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170
....*....|....*
gi 2062575555 554 NNNLKIYLLLFVFWV 568
Cdd:pfam06455 160 KGLIKIYLLSFLLWL 174
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
17-489 |
4.60e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 166.98 E-value: 4.60e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 17 ISMTCFFLSLYFLLNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLM 96
Cdd:MTH00063 5 VSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 97 FVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWmlnygswNYVFYLEVM 176
Cdd:MTH00063 85 FVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL-------SCWGGSGSF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 177 qnefemmVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWLGQLLLLLSGLT 256
Cdd:MTH00063 158 -------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLLT 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 257 MFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSI 336
Cdd:MTH00063 231 IFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSIL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 337 hmpltSACFNVSN-----LALCGMPFLAGFYSKDMILEMVMISNVNFFSFFLYFFSTGLTVSYTFRLIFysmtgdLNCMS 411
Cdd:MTH00063 311 -----YGSWNLFYlfllvLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCL------ILFGV 379
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2062575555 412 LNMLNdEGWVMLRGMMGLLIMSiigGSMLNWLIFS-SPYMICLPLYMKLLTLFTCIFGGLFGYLISLSKLFTLNKSLIF 489
Cdd:MTH00063 380 KSSLS-SGVRFLFFNSGLMVFL---WLFINYYVFLlLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLFSNWSSSLF 454
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
26-368 |
2.22e-44 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 164.38 E-value: 2.22e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 26 LYFLLNNMIYFIEWEVVSLNSMsIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMS-------SDLNINRFIMLVLMFV 98
Cdd:PRK06525 45 AYAFYQAGKVAVTLTLVNLGDV-ALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFI 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 99 LSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLEVMQN 178
Cdd:PRK06525 124 GAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHG 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 179 EFEMMVIGsLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFnILLANS---WLGQLLLLLSGL 255
Cdd:PRK06525 204 SLKYLVFL-GILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA-IQSMGPiphVIGYVGAVMAIV 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 256 TMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFY------KLAMFHLLTHALFKALLFMCAGAIIHNMnNSQDIR 329
Cdd:PRK06525 282 TLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC-GTRLLP 360
|
330 340 350
....*....|....*....|....*....|....*....
gi 2062575555 330 LMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMIL 368
Cdd:PRK06525 361 RLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
52-400 |
2.32e-44 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 169.21 E-value: 2.32e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 52 TFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYF 131
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 132 QNIKSYNAGMLTALS-NRIGDVALL---LAIAWMLnyGSWNYVFYL---EVMQNEFEMMVIGSLVMLAAMTKSAQIPFSS 204
Cdd:PRK12648 151 HHRADARRGARMALTvTGAGGLALLagvLLLGHIV--GSYDLDVVLaagDLIRAHPLYPPALVLILLGAFTKSAQFPFHF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 205 WLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANS-WLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLG 283
Cdd:PRK12648 229 WLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTeEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 284 LMMSILSMGfYKLA----MFHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLA 359
Cdd:PRK12648 309 LITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLN 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2062575555 360 GFYSKDMIL-EMVMISNVNFFSFFLYFFST---GLTVSYTFRLIF 400
Cdd:PRK12648 387 GFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIH 431
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-372 |
6.24e-44 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 167.02 E-value: 6.24e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 46 SMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSY 125
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 126 cLVIYF--QNIKSYNAGMLTALSNRIGDVALLLAIAWMLNYG-----SWNYVFYLEVMQNEFEM-MVIgsLVMLAAMTKS 197
Cdd:PRK12647 133 -LLIGFnhEREAARRAALQALLVTGGGGLALLAGLILLGNVTgtyslSELLASGDVIREHPLYLaILL--LVLGGAFTKS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 198 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILL-ANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIAL 276
Cdd:PRK12647 210 AQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLgGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAY 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 277 STLSQLGLMMSILSMGF---YKLAMFHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALC 353
Cdd:PRK12647 290 STVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
330
....*....|....*....
gi 2062575555 354 GMPFLAGFYSKDMILEMVM 372
Cdd:PRK12647 369 GLPPLFGFLAKELIYEALL 387
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
36-369 |
1.64e-41 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 160.31 E-value: 1.64e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 36 FIEWEVVSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDL-NINRFIMLVLMFVLSMMLLIISPNLVSIL 114
Cdd:PRK12646 57 YLSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKdNLPRFYFYLTLFMFSMIGIVLSDNTILMY 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 115 LGWDGLGLVSYCLVIY-FQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLEVMQNE------FEMMVIgs 187
Cdd:PRK12646 137 VFWELTSVSSFLLISYwYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHiknhglFIPMIF-- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 188 LVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLA-NSWLGQLLLLLSGLTMFMAGLGANF 266
Cdd:PRK12646 215 MFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGlSNMYIYIVTFVGLITMLFGSITALK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 267 EFDLKKIIALSTLSQLGLMMSILSMG-------------FYKL----AMFHLLTHALFKALLFMCAGAIIHNmNNSQDIR 329
Cdd:PRK12646 295 QWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasIYVFvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIR 373
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2062575555 330 LMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILE 369
Cdd:PRK12646 374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
9-377 |
3.54e-39 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 153.16 E-value: 3.54e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 9 ISFLNLISISMTCfflslyfllNNMIYFIEWevvsLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDL-NI 87
Cdd:PRK12645 43 IYFLSLIPTTMSG---------NTVMKTLPW----IPSLGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 88 NRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIY-FQNIKSYNAGMLTALSNRIGDVALLLAIAWM-LNYG 165
Cdd:PRK12645 110 GNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYwYEREASRYGAQKSMLITVFGGLSMLGGFILLyIMTG 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 166 SWN---YVFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLAN 242
Cdd:PRK12645 190 SFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAG 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 243 S--WlGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMG------------FYKL----AMFHLLTH 304
Cdd:PRK12645 270 SqvW-FWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGaaslhyqgddskIYAAaitaAIFHLINH 348
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2062575555 305 ALFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILE-MVMISNVN 377
Cdd:PRK12645 349 ATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFEsMLNATEAN 421
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-400 |
3.64e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 150.46 E-value: 3.64e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 46 SMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDL-NINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVS 124
Cdd:PRK12644 63 SLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEpRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 125 YCLV-IYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLN-YGSWNYVFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPF 202
Cdd:PRK12644 143 FLLIgHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQaAGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPF 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 203 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANS--WlGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLS 280
Cdd:PRK12644 223 HFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVpvW-RPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 281 QLGLMMSILSMG-----FYKLAMfhLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGM 355
Cdd:PRK12644 302 QLGFLTVLVGIGtrdaaLAGLAM--LLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGL 378
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2062575555 356 PFLAGFYSKDMILEMVMISNVNFFSFFLYFFS----TGLTVSYTFRLIF 400
Cdd:PRK12644 379 PPLLGFVAKEAALEAVLHDGALGPAGPVVLAGivlgSILTVAYSLRFLW 427
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-369 |
9.60e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 139.96 E-value: 9.60e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 44 LNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLV 123
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 124 SYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNYGSWNYVF--------YLEVMQNEFEMMVIGSLVMLAAMT 195
Cdd:PRK12649 147 SFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIatilqdseLIENIKGHPLFLITLILIFIGAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 196 KSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN-ILLANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKII 274
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHpIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 275 ALSTLSQLGLMMSILSMGFYK-------LAMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNV 347
Cdd:PRK12649 307 AYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEA-ATRDIRKLGGLRKEMPITFIVASI 385
|
330 340
....*....|....*....|..
gi 2062575555 348 SNLALCGMPFLAGFYSKDMILE 369
Cdd:PRK12649 386 AALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-369 |
5.71e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 123.45 E-value: 5.71e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 52 TFLFDWMSLLFMSFVLMIASLVIYYSkeYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYF 131
Cdd:PRK08375 72 ELRADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 132 QNIKSYNAGMLTALSNRIGDVALLLAIAwmLNY---GSWNYVFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPA 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVG--LLYgvtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPR 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 209 AMAAPTPVSALVHSSTLVTAGVYLLIRFNILL------ANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQL 282
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdfrFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 283 G---LMMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLA 359
Cdd:PRK08375 308 GyilLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330
....*....|
gi 2062575555 360 GFYSKDMILE 369
Cdd:PRK08375 387 GFVSKWYLVV 396
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
14-369 |
2.01e-26 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 114.06 E-value: 2.01e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 14 LISISMTCFFLSLYFLLNNMIYFIEWEVVSlnsmSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEY---MSSDLNINRF 90
Cdd:PRK08667 38 VIAIALLLFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 91 IMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIY-FQNIKSYNAGMLTALSNRIGDVALLLAIAWM-LNYGSWN 168
Cdd:PRK08667 114 SALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTGSFE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 169 YVFyLEVMQNEFEMMVIgsLVMLAAMTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF--NILLANSWL 245
Cdd:PRK08667 194 LSP-LGASAGILSLVFL--LLFLGFGIKAGIIPFHKWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFlmDVLSPELWW 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 246 GQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMsiLSMGFYKL----------------AMFHLLTHALFKA 309
Cdd:PRK08667 270 GVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL--MGIGLYVIfgvygldtlallalggALFHSLNHALFKS 347
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 310 LLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILE 369
Cdd:PRK08667 348 LLFLTAGSVVHAT-GTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
96-364 |
4.76e-26 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 112.67 E-value: 4.76e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 96 MFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKS-YNAGMLTALSNRIGDVALLLAIaWMLNYGSWNYVFylE 174
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAF-GLLARESGSYDF--A 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 175 VMQNEFEMMVIGSLVMLAAM----TKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNI-LLANS--WLG 246
Cdd:PRK06521 198 AMRAAHLSPFWASLVFLLALfgfgAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFdLLGAPgwWWG 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 247 QLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSI-LSMGFYKL------------AMFHLLTHALFKALLF 312
Cdd:PRK06521 277 VLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIfVGLgLAMVFIAYgmpllaalaltaALYHLLNHALFKSLLF 356
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2062575555 313 MCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSK 364
Cdd:PRK06521 357 LGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE 407
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
58-316 |
3.09e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 106.32 E-value: 3.09e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 58 MSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFImLVLMFVL-SMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKs 136
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYV-RALAGVLaAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 137 ynAGMLTA----LSNRIGDVALLLAIA-WMLNYGSWnyvFYLEVMQN------EFEMMVIGSLVMLAAMTKSAQIPFSSW 205
Cdd:PRK08168 148 --FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSL---SLSALWAHlaaqgaSPSLQAAALLLVLAVILKTAQLPVHGW 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 206 LPAAMAAPTPVSALVHSStLVTAGVYLLIRFNILLANS-WLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGL 284
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQApPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
250 260 270
....*....|....*....|....*....|..
gi 2062575555 285 MMSILSMGFYKLAMFHLLTHALFKALLFMCAG 316
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-369 |
7.20e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 105.03 E-value: 7.20e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 90 FIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGM-LTALSNrIGDVALLLAIAwmLNYGSWN 168
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLrYLFYSN-VAMLFYLIGAV--LVYQANG 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 169 YVFYLEVMQNEFEMMvigSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILLANSWlgQL 248
Cdd:PRK07234 173 TFAFSGLATADPEAF---ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLD--LI 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 249 LLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLG-LMMSILSMGFYKLAmfhlltHALFKALLFMCAGAiIHNMNNSQD 327
Cdd:PRK07234 248 VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGfILAAPLVGGLYALA------HGLVKSTLFLCAGA-LPSRNFTEL 320
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2062575555 328 IRLMGGLSIHMPLTSACFNVSnlalcGMPFLAGFYSKDMILE 369
Cdd:PRK07234 321 ISQMLGIGKWIPLTMASFSIA-----GFPLLAGFVSKVLTLK 357
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
145-400 |
1.13e-23 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 105.38 E-value: 1.13e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 145 LSNRIGDVALLLAIAWMLNY-GSWNYVFYLEVMQNEFEMMVIGSLVMLA----AMTKSAQIPFSSWLPAAMAAPTPVSAL 219
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAATANLDPLTATLLGLAliagPTGKCAQFPLHLWLDEAMEGPNPASIL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 220 vHSSTLVTAGVYLLIRFNILLANS-WLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAM 298
Cdd:PRK07390 258 -RNSVVVATGAWVLIKLQPVLALSpVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIAL 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 299 FHLLTHALFKALLFMCAGAIIHNmNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYS-KDMILEMVMISNVN 377
Cdd:PRK07390 337 LLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWAlLRLADGLWAVSPWL 415
|
250 260
....*....|....*....|...
gi 2062575555 378 FFSFFLYFFSTGLTVSYTFRLIF 400
Cdd:PRK07390 416 VGVLLLVNALTAFNLTRVFRLVF 438
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-375 |
2.36e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 100.82 E-value: 2.36e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 56 DWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIK 135
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 136 -SYNAGMLTALSNRIGDVALLLAIAWMLN-YGSWN--------YVFYLEVMQNEFEMMVIGSLVMLAAMT-----KSAQI 200
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALwaftiKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 201 PFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF-------NILLAN--SWLGQLLLLLSGLTMFMAGLGANFEFDL 270
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgiSPSLIDfrAALSPILIILGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 271 KKIIALSTLSQLGLMMSILSMGF---YKLAMFHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSIHMPLTSACFNV 347
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLI 398
|
330 340
....*....|....*....|....*...
gi 2062575555 348 SNLALCGMPFLAGFYSKDMILEMVMISN 375
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESG 426
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
60-375 |
1.48e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 97.96 E-value: 1.48e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 60 LLFMSFVLMIASLVIYYSKEYMSSDLNiNRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNA 139
Cdd:PRK06589 89 LLLIGFLWICALLYTPKYLAINNIDSS-SRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSG 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 140 GmLTALSNRIGDVALLLAIAWMLNYGSWNYVFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSAL 219
Cdd:PRK06589 168 G-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSAL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 220 VHSSTLVTAGVYLLIR-------FNILLANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM---SIL 289
Cdd:PRK06589 247 LHAVIVVKTGLFCIYKillyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsaFIL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 290 SMGFYKLAMFHLLTHALFKALLFMCAGAIIhNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILE 369
Cdd:PRK06589 327 TPKALGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILL 405
|
....*.
gi 2062575555 370 MVMISN 375
Cdd:PRK06589 406 AASEQN 411
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
61-444 |
5.02e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 93.62 E-value: 5.02e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 61 LFMSFVLMIASLV----IYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNI-K 135
Cdd:PRK08376 90 LFGAFMALIATIVsflaVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTwE 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 136 SYNAGMLTALSNRIGDVALLLAIAWML-NYGSWNYVFYLEVMQNEFEMMVIGSLVMLAA--MTKSAQIPFSSWLPAAM-A 211
Cdd:PRK08376 170 AIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVVAKIALALFIAglAMKSGAVPVHMWLPDAYpA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 212 APTPVSALVHSSTLvtAGVYLLIR-----FNILLANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM 286
Cdd:PRK08376 250 APSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYML 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 287 SILSMGFYKL---------------AMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLA 351
Cdd:PRK08376 328 LGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGGLARTMPKTTIAFLIGAAA 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 352 LCGMPFLAGFYSKDMILEMVMIsnVNFFSFFLYFFSTGLTVSyTFRLIFYSMTGDLNCMSLNMLNDEGWVMLRGmMGLLI 431
Cdd:PRK08376 407 IVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLA-SFVKVFHTAFFGPPSEKVMNVKEPPKPMLVP-MLILA 482
|
410
....*....|...
gi 2062575555 432 MSIIGGSMLNWLI 444
Cdd:PRK08376 483 IAIIGMGLFPWQI 495
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
53-323 |
8.26e-20 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 92.79 E-value: 8.26e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 53 FLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWdGLGLVSYCLVIYFQ 132
Cdd:PRK08601 68 WHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCW-GATLLGLTLLIGLN 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 133 NI--KSYNAGMLTALSNRIGDVALLLAIAWM-LNYGSWNYVFYLE----VMQNEFEMMVIGSLVMLAAMTKSAQIPFSSW 205
Cdd:PRK08601 147 KGwkVAREAAKISGMLFLISWLALALAIVWLfIATGEWQLTSVLSnenlAQLGTWEKTGINLLLILAVMIPAAQWPFQRW 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 206 LPAAMAAPTPVSALVHSStLVTAGVYLLIRFNILLANSWLGQLLLLLSGLTMFMaGLGANF-EFDLKKIIALSTLSQLGL 284
Cdd:PRK08601 227 LIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLI-GTGISLvQVDYKRQLVGSTMAQMGF 304
|
250 260 270
....*....|....*....|....*....|....*....
gi 2062575555 285 MMSILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMN 323
Cdd:PRK08601 305 MLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
149-368 |
6.31e-18 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 86.67 E-value: 6.31e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 149 IGDVALLLAIAWM-LNYGSWNYvFYLEVMQNEFEM---MVIGSLVMLAAMTKSAQIPFSSWLP-AAMAAPTPVSALvHSS 223
Cdd:COG1008 172 AGSLLMLVAILALyFLAGALTF-DIAELAAAPLPLtaqLLLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAG 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 224 TLVTAGVYLLIRFNILL---ANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMsilsMGFYKL---- 296
Cdd:COG1008 250 VLLKMGGYGLLRFALPLfpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL----LGIFALnplg 325
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2062575555 297 ---AMFHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMIL 368
Cdd:COG1008 326 lqgAVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVL 399
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
23-371 |
1.39e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 86.20 E-value: 1.39e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 23 FLSLYFLLNNMIYFIEWEVVSLNSMSIVMTFLFDWMSLLFmsFVLMIASLVIYYSKEYMSSDLNINR--FIMLVLMFVLS 100
Cdd:PRK08668 33 ALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTHLSW--FFAMISLLVIFSVAFFMVSEKTKNDayFNMFALMSLAG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 101 MMLLIISPNLVSILLGWDGLGLVSYcLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLN-YGSWNYVFYLEVMQNE 179
Cdd:PRK08668 111 VLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQGLIND 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 180 --FEMMVIGSLVMLAA-MTKSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVY-------------LLIRFNILLAN 242
Cdd:PRK08668 190 tsTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYgfllvlyvlpgtkLFSEFGTYRGV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 243 SWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGF---YKLAMFHLLTHALFKALLFMCAGAII 319
Cdd:PRK08668 269 PLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVFNHALFKGLFFLIFAAVI 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2062575555 320 HNMNNSQdIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEMV 371
Cdd:PRK08668 349 YRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
110-368 |
1.71e-17 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 85.72 E-value: 1.71e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 110 LVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNY-GSWnyvfylevmqnEFEMMVIGS- 187
Cdd:PRK12668 115 LLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAEtGSF-----------AFGAIAGLGg 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 188 ----LVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF---NILLAnswlgqlllllsGLTMFMA 260
Cdd:PRK12668 184 taawLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAfpgTELLI------------YIGAAMA 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 261 GLGANF---EFDLKKIIALSTLSQLGLMMSILSMGfYKL----AMFHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGG 333
Cdd:PRK12668 252 VYGVFFallENDLRRLLSYHIVSQVGYMVAGIGIG-TALaingAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGG 329
|
250 260 270
....*....|....*....|....*....|....*
gi 2062575555 334 LSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMIL 368
Cdd:PRK12668 330 LYRSMPLTALFCLVGALSISAFPLFSGFVSKSMII 364
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
87-399 |
3.44e-17 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 84.43 E-value: 3.44e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 87 INRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAwmLNYGS 166
Cdd:PRK08377 107 IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVA--LIYGA 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 167 WNYVFYLEVMQNEFEMMVIGSLVMLAAM-----TKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNILL 240
Cdd:PRK08377 185 TGTLNMAHIAQLAGTIDPTVAQVGLALLifglaVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLM 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 241 --ANSW--LGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGF---YKLAMFHLLTHALFKALLFM 313
Cdd:PRK08377 264 qnANGWssVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 314 CAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILeMVMISNVNFFSFFLYFFSTGLTVS 393
Cdd:PRK08377 344 AVGYVGITL-GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAV 421
|
....*.
gi 2062575555 394 YTFRLI 399
Cdd:PRK08377 422 YYFRLI 427
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
52-364 |
7.12e-17 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 83.24 E-value: 7.12e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 52 TFLFDWMSLLFMSFVLMIASLVIYYSKEYMS-SDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLV-I 129
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLErRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 130 YFQNIKSYNAGM----LTALSNRIgdvaLLLAIAWMLNY-GSWNY---VFYLEVMQNEFEMMVIGSLVMLAAMT-KSAQI 200
Cdd:COG1007 145 RRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLagiAAALAAGGANSPLLLLGLVLVLAGLAfKLSAV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 201 PFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRF----NILLANSWLGQLLLLLSGlTMFMAGLGANFEFDLKKII 274
Cdd:COG1007 221 PFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlveaFPGLAADWQLLLAVLAVL-SMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 275 ALSTLSQLGLMMSILSMGF---YKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLA 351
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330
....*....|...
gi 2062575555 352 LCGMPFLAGFYSK 364
Cdd:COG1007 378 LAGIPPTAGFFGK 390
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
154-361 |
2.86e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 72.55 E-value: 2.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 154 LLLAIA-WML--NYGSWNYVFYLEVMQNefemMVIGSLVMLAAMTK----SAQIPFSSWLPAAMA-APTPVSALVhSSTL 225
Cdd:PRK08042 148 LLLAIAcWLLwqRYGTLDLRLLDMRMQQ----LPLGSDIWLLGVIGfgllAGIIPLHGWVPQAHAnASAPAAALF-STVV 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 226 VTAGVYLLIRFNILLANS--WLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLA------ 297
Cdd:PRK08042 223 MKIGLLGILTLSLLGGNAplWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIAleqpal 302
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2062575555 298 --------MFHLLTHALFKALLFMCAGAIIHNMNNsQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGF 361
Cdd:PRK08042 303 ialglvggLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
56-368 |
5.38e-13 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 71.51 E-value: 5.38e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 56 DWMSLLFMSFVLMIASLVIYYSKEymSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQNIK 135
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWE--SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 136 SYNAGMLTALSNRIGDVALLLAIAWM--LNYGSWNYVFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMA-A 212
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 213 PTPVSALVhSSTLVTAGVYLLIRFNILL---ANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGL-MMSI 288
Cdd:TIGR01972 234 PTAGSVIL-AGVLLKMGTYGFLRFNLPLfpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 289 LSMGFYKL--AMFHLLTHALFKALLFMCAGAIIHNMnNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDM 366
Cdd:TIGR01972 313 FSFNELGIsgAVFQMISHGLITAALFLLVGVLYERA-HTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
..
gi 2062575555 367 IL 368
Cdd:TIGR01972 392 IL 393
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
52-364 |
4.48e-12 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 68.31 E-value: 4.48e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 52 TFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDlNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIY- 130
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDR-GRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 131 FQNIKSYNAGM----LTALSnrigdvALLLAIAWMLNYG-----SWNYVFYLEVMQNEFEMMVIGSLVMLAA--MTKSAQ 199
Cdd:PRK05777 147 RDRRRSLEAAIkyfvLGALA------SGFLLYGMSLLYGatgslSFAGIAKALADGSGNSLLLLFGLVFLLVglAFKLSA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 200 IPFSSWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIR-FNILLANS--WLGQLLLLLSGLTMFMAGLGANFEFDLKKIIA 275
Cdd:PRK05777 221 VPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRlLVVAFGGLseDWQQVLAIIAIASMLVGNLAALSQTNIKRLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 276 LSTLSQLGLMM---SILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLAL 352
Cdd:PRK05777 300 YSSIAHAGYLLvglAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSL 379
|
330
....*....|..
gi 2062575555 353 CGMPFLAGFYSK 364
Cdd:PRK05777 380 AGIPPTAGFWGK 391
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
176-368 |
6.14e-12 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 68.05 E-value: 6.14e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 176 MQNEFEMMVIGSLVMLAAMTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILL---ANSWLGQLLLLL 252
Cdd:PRK12663 200 MGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqERELLHPLLATM 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 253 SGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM---SILSMGFYKLAMFHLLTHALFKALLFMCAGAIIHnMNNSQDIR 329
Cdd:PRK12663 279 AAITMVIGALGALAYKDIRRIAGYQVISSIGFILlglALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQ 357
|
170 180 190
....*....|....*....|....*....|....*....
gi 2062575555 330 LMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMIL 368
Cdd:PRK12663 358 YLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
200-368 |
1.93e-11 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 66.38 E-value: 1.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 200 IPFSSWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFNILL---ANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIA 275
Cdd:PRK05846 228 FPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSLPLfpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIA 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 276 LSTLSQLGLMMsilsMGFYKL-------AMFHLLTHALFKALLFMCAGAIIHNMNnSQDIRLMGGLSIHMPLTSACFNVS 348
Cdd:PRK05846 307 YSSISHMGFVT----LGIFAGnqlgiqgAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFF 381
|
170 180
....*....|....*....|
gi 2062575555 349 NLALCGMPFLAGFYSKDMIL 368
Cdd:PRK05846 382 AMASLGLPGTSGFVGEFLIL 401
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
182-369 |
3.38e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 65.74 E-value: 3.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 182 MMVIGSLVMLAAMTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFNILLAN---SWLGQLLLLLSGLTM 257
Cdd:PRK07691 208 ITVVAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFShdtSFTHYLILILALLTI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 258 FMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMgFYKLAM----FHLLTHALFKALLFMCAGAIIHnMNNSQDIRLMGG 333
Cdd:PRK07691 287 IFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAM-MTESGMigaiYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGG 364
|
170 180 190
....*....|....*....|....*....|....*.
gi 2062575555 334 LSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILE 369
Cdd:PRK07691 365 LIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-369 |
1.13e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 64.22 E-value: 1.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 183 MVIGSLVMLAAMTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFNILL-ANSWLGQLLLLLSGLTMFMA 260
Cdd:PRK12665 209 TALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLfPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 261 GLGANFEFDLKKIIALSTLSQLGLMMSILSMGF---YKLAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSIH 337
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKA 366
|
170 180 190
....*....|....*....|....*....|..
gi 2062575555 338 MPLTSACFNVSNLALCGMPFLAGFYSKDMILE 369
Cdd:PRK12665 367 SPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
14-364 |
3.66e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 62.33 E-value: 3.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 14 LISISMTCFFLSLYFLLnnmiyfIEWEVVSLNSMSivMTFLFDWMSLLFMSFVLMIASLVIYYSKEYM-SSDLNINRFIM 92
Cdd:CHL00049 44 LYFISSTSLVMSITALL------FQWREEPMISFS--GNFQTNNFNEIFQFLILLCSTLCIPLSVEYIeCTEMAITEFLL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 93 LVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYF-QNIKSYNAGMLTALSNRIGDVALLLAIAWMlnYGSWNYVF 171
Cdd:CHL00049 116 FVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVYGFSWL--YGLSGGEI 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 172 YLEVMQN---EFEMM-VIGSLVMLAAMT-----KSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIR-FNIL- 239
Cdd:CHL00049 194 ELQEIVNgliNTQMYnSPGISIALIFITvgigfKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRiFDIPf 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 240 --LANSWLGQLLLLLSGlTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFYKLAMFHLLTHALFkaLLFMCAGA 317
Cdd:CHL00049 273 yfSSNEWHLLLEILAIL-SMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGT 349
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2062575555 318 ----IIHNMNNSQD-IRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSK 364
Cdd:CHL00049 350 faciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
195-372 |
8.24e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 61.10 E-value: 8.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 195 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNILLA----NSWLGQLLLLLSGLTMFMAGLGANFEFD 269
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDaaigSDFPGRLLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 270 LKKIIALSTLSQLGLMMSILSMG---FYKLAMFHLLTHALFKALLFmCAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFN 346
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGgplGIFAALLHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTGWGLM 383
|
170 180
....*....|....*....|....*.
gi 2062575555 347 VSNLALCGMPFLAGFYSKDMILEMVM 372
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLILTAGL 409
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-437 |
2.71e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 59.75 E-value: 2.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 54 LFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYCLVIYFQN 133
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 134 IKSYNAGMLTALSNRIG------DVALLLAIAWMLNYGSWNYVFYLEVMQNEFEMMVIgsLVMLAAMTKSAQIPFSSWLP 207
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGatfyliGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVL--FIMVGLFIKAALFPFHKWLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 208 AAMAAPTPVSALVHSSTLVTAGVYLLIRF-------NILLANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLS 280
Cdd:PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSIS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 281 QLGLMMSILSMGFYK---LAMFHLLTHALFKALLFMCAGAIIHNMNNSqDIRLMGGLSIHMPLTSACFNVSNLALCGMPF 357
Cdd:PRK12662 314 HIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 358 LAGFYSKDMILEMVMISNVnFFSFFLYFFSTGLTVSYTFRLI--FYSMTGDLNCMSLNMLNDEGWVMLRGMMGLLIMSII 435
Cdd:PRK12662 393 TSGFVAKWYILDAFIKSNA-WIGLVVLLVGSGLSVIYVWKIVeaLYFESRMVESKANDKAFKTPNAMVLCIWIMAILSII 471
|
..
gi 2062575555 436 GG 437
Cdd:PRK12662 472 VG 473
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
187-368 |
7.20e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 58.23 E-value: 7.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 187 SLVMLAAMTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNILL----ANSWLGQLLLLLSGLTMFMAG 261
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqsgAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 262 LGANFEFDLKKIIALSTLSQLGLMMSILSMG-----FYklAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSI 336
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGtplalFW--MLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFR 365
|
170 180 190
....*....|....*....|....*....|..
gi 2062575555 337 HMPLTSACFNVSNLALCGMPFLAGFYSKDMIL 368
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
44-376 |
1.87e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 56.96 E-value: 1.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 44 LNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYyskEYMSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLV 123
Cdd:PRK06277 59 VNGYHSGITYLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 124 SYCLVIYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLNY-GSWN---YVFYLEVMQNEfEMMVIGSLVMLAAMTKSAQ 199
Cdd:PRK06277 136 QVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLAStGTLNitdIHNALLVNPTS-PVIYGGLLLLIFGLLYGSG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 200 IPFSSWLPAAMAAPTP--VSALVHSSTLVTAGVYLLIRFNILLANSWLGQLLLLLSGLTMFMAGLG---ANFEFDLKKII 274
Cdd:PRK06277 215 LPPFHTIKSDIYAKAKpfGSALLQTFSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGvvmALLQTDYKRLL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 275 ALSTLSQLGLMMSILSMGF---YKLAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLA 351
Cdd:PRK06277 295 AYHAISQGGYVAAGLALGTplgIVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLA 373
|
330 340
....*....|....*....|....*
gi 2062575555 352 LCGMPFLAGFYSKDMILEMVMISNV 376
Cdd:PRK06277 374 ISGVPPFNGFQSKLMLAQAAMQANM 398
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
196-367 |
9.00e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 51.57 E-value: 9.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 196 KSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFNILL---ANSWLGQLLLLLSGLTMFMAGLGANFEFDLK 271
Cdd:PRK12561 198 KLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQMlpdAHVYFAPALAILGVVNIIYGALNAFAQDNVK 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 272 KIIALSTLSQLGLMM----SILSMGFYKlAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSIHMPLTSACFNV 347
Cdd:PRK12561 277 RRLAYSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTG-VTYERTHTLSIPNMGGLAKVMPKTFALFTA 354
|
170 180
....*....|....*....|
gi 2062575555 348 SNLALCGMPFLAGFYSKDMI 367
Cdd:PRK12561 355 SSMASLALPGMSGFVSELTV 374
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
42-90 |
1.76e-06 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 45.11 E-value: 1.76e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2062575555 42 VSLNSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMSSDLNINRF 90
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
45-364 |
1.77e-05 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 47.35 E-value: 1.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 45 NSMSIVMTFLFDWMSLLFMSFVLMIASLVIYYSKEYMS-SDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLV 123
Cdd:PRK02504 66 NPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVEqSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 124 SYCLVIYFQNIKSYNAGMLTALSNRIGDVALLL---AIAWMLNYGSWNYVFYLEVMQNEFEMMVIGSLVMLAAMT--KSA 198
Cdd:PRK02504 146 SYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLygsSLLYGLSGGSTQLSAIALALITSPSLGLALALVFVIAGIafKIS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 199 QIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFNI----LLANSWLGQLLLLLSGlTMFMAGLGANFEFDLKKI 273
Cdd:PRK02504 226 AVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLLVtafpSFDEQWKLLFTALAIL-SMVLGNVVALAQTSMKRM 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 274 IALSTLSQLGLMMSILSMGF---YKLAMFHLLTHalfkalLFMCAGA----IIHNMNNSQD-IRLMGGLSIHMPLTSACF 345
Cdd:PRK02504 304 LAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY------LFMNLGAfacvILFSLRTGTDqISDYAGLYQKDPLLTLGL 377
|
330
....*....|....*....
gi 2062575555 346 NVSNLALCGMPFLAGFYSK 364
Cdd:PRK02504 378 SLCLLSLGGIPPLAGFFGK 396
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
200-367 |
1.27e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 44.70 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 200 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNILL---ANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIAL 276
Cdd:PRK02546 230 VPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMlpdAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAY 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 277 STLSQLGLMM----SILSMGFYKlAMFHLLTHALFKALLFMCAGAIiHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLAL 352
Cdd:PRK02546 310 SSISHMGFVLigigSFTDLGTSG-AMLQMISHGLIGASLFFLVGAT-YDRTHTLMLDEMGGVGQKMRKMFAMWTACSLAS 387
|
170
....*....|....*
gi 2062575555 353 CGMPFLAGFYSKDMI 367
Cdd:PRK02546 388 LALPGMSGFVAELMV 402
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
51-361 |
1.29e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.91 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 51 MTFLFDWMSLLFM---SFVLMIASLVIYYSKEYMSSDLNInrfIMLVLMFVLSMMLLIISPNLVSILlgWDGLGLVSYCL 127
Cdd:MTH00226 96 LVFAVDGISIYFIiltGFIVPCSILISWHSVKYLTKSFLI---CMLILEFLLYAVFSVLDIFMFYIL--FEGVLIPMYLI 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 128 V-IYFQNIKSYNAGMLTALSNRIGDVALLLAIAWMLN-YGSWNYVFYLE----VMQNEFEMMVIGslVMLAAMTKSAQIP 201
Cdd:MTH00226 171 LgIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNiHGTTDYLTLAScshvVSEQTQKWIFLG--IFLAMAVKIPIFP 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 202 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN---ILLANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALST 278
Cdd:MTH00226 249 FHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSwpiLPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSS 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 279 LSQLGLM-MSILSMGFYKL--AMFHLLTHALFKALLFMCAgAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGM 355
Cdd:MTH00226 329 VAHMGLVsITLVTHDIIGLtgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAV 407
|
....*.
gi 2062575555 356 PFLAGF 361
Cdd:MTH00226 408 PPSGNF 413
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
200-367 |
1.47e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 44.69 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 200 IPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFNI-LLANSWLGQL--LLLLSGLTMFMAGLGANFEFDLKKIIA 275
Cdd:PRK06473 222 VPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVgLFPEAWVYLApwLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 276 LSTLSQLGLMM---------SILSmgfyklAMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGL---SIHMPLTSA 343
Cdd:PRK06473 301 YSSIGHMGYILlaaaaatplSILA------AVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLlnpERGLPITGS 373
|
170 180
....*....|....*....|....
gi 2062575555 344 CFNVSNLALCGMPFLAGFYSKDMI 367
Cdd:PRK06473 374 LMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
200-369 |
2.54e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.93 E-value: 2.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 200 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNI-LLANSWLGQL--LLLLSGLTMFMAGLGANFEFDLKKIIAL 276
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLqLFPQTWSLVApgLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 277 STLSQLG--LMMSILSMGFYKL-AMFHLLTHALFKALLFMCAGaIIHNMNNSQDIRLMGGLSI---HMPLTSACFNVSNL 350
Cdd:PRK07363 302 SSIGHMGyiLVAAAAGTQLSLLgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAGM 380
|
170
....*....|....*....
gi 2062575555 351 ALCGMPFLAGFYSKDMILE 369
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQ 399
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
188-372 |
5.26e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 39.42 E-value: 5.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 188 LVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIrfniLLANSWLGQLLLLLSGLTMFMAGLGANFE 267
Cdd:MTH00112 97 LLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLL----MTSNSLNPTLLLTLAILSTLIGGWGGLNQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 268 FDLKKIIALSTLSQLGLMMSILSMGfYKLAMFHLLTHALFKALLFMcagaiIHNMNNSQDIRLMGGLSIHMPLTSACFNV 347
Cdd:MTH00112 173 TQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTLML 246
|
170 180
....*....|....*....|....*.
gi 2062575555 348 SNLALCGMPFLAGFYSKDMIL-EMVM 372
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPKWLILqELTK 272
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
150-375 |
5.37e-03 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 39.54 E-value: 5.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 150 GDVALLLAIAWMLNYGSWNYVFYLEVMQNE-----FEMMV-IGSLVMLAAmtKSAQIPFSSWLPAAMAAPTPVSALVHSS 223
Cdd:CHL00011 174 GSIFLLIGVLGMGLYGSNEPTLNFETLANQsypvaLEILFyIGFLIAYAV--KLPIIPLHTWLPDTHGEAHYSTCMLLAG 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 224 TLVTAGVYLLIRFNILL---ANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMM----SILSMGFYKl 296
Cdd:CHL00011 252 ILLKMGAYGLIRINMELlphAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIigigSITDTGLNG- 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 297 AMFHLLTHALFKALLFMCAGAiihnmnnSQD-IRL-----MGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMILEM 370
Cdd:CHL00011 331 AILQIISHGFIGAALFFLAGT-------SYDrIRLvyldeMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFG 403
|
....*
gi 2062575555 371 VMISN 375
Cdd:CHL00011 404 IITSQ 408
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
149-361 |
6.49e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 39.26 E-value: 6.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 149 IGDVALLLAIAWMLNY-GSWNYVFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 227
Cdd:MTH00217 171 IGSVFMLLGIFTLYSYaGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLK 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 228 AGVYLLIRFNILL---ANSWLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLM-MSILSMGFYKL--AMFHL 301
Cdd:MTH00217 251 LGGYGFIRFSWPLlpeASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVtLGIFSHTIQGLvaAIFLM 330
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 302 LTHALFKALLFMcAGAIIHNMNNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGF 361
Cdd:MTH00217 331 LAHGLVSSALFI-AVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNF 389
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
62-316 |
7.46e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 39.00 E-value: 7.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 62 FMSFVLMIASLVIYYSKEY-MSSDLNINRFIMLVLMFVLSMMLLIISPNLVSILLGWDGLGLVSYcLVIYFQNIKSYNAG 140
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYsIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSY-VAIALTKKNKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 141 MLTALSNrigdvallLAIAWMLNYGSWNYVFYLEVMQNEFEMMVIGSLVMLAAMTKSAQIPF--SSWLPAAMA-APTPVS 217
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2062575555 218 AlVHSSTLVTAGVYLLIRFNILLANS---WLGQLLLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSM--- 291
Cdd:PRK06459 196 A-ILSATMTLMGVYGILKMTILTQTIpigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymv 274
|
250 260 270
....*....|....*....|....*....|....*
gi 2062575555 292 ---------GFYKLAM-FHLLTHALFKALLFMCAG 316
Cdd:PRK06459 275 tkqlitsieHFSLITViLYSFAHSVAKTGLFLSSG 309
|
|
| |
