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Conserved domains on  [gi|2082544809|gb|QZA76137|]
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per os infectivity factor 3, partial [Hyposidra talaca nucleopolyhedrovirus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PIF3 super family cl27976
Per os infectivity factor 3; This family contains viral proteins and includes Baculovirus Per ...
 116-208 2.26e-45

Per os infectivity factor 3; This family contains viral proteins and includes Baculovirus Per os infectivity factor 3 (PIF3). PIF3 forms a complex on the occlusion-derived virus surface with PIF1, PIF2, and P74 which has an essential function in the initial stages of baculovirus oral infection.


The actual alignment was detected with superfamily member PHA03399:

Pssm-ID: 391803  Cd Length: 200  Bit Score: 149.28  E-value: 2.26e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082544809 116 IN*FAASEFV*NQM*VSTYRDLFDDLGEPRPYLCgSGGQLDVNLTNRQFSVNDCRCADGYIRMVFNQTALARSVPVCIPA 195
Cdd:PHA03399  109 IKVFTASEFVVNQLCISTYRDIVDDDGELRPYVC-ENGTLDIDLENRPFSVDDCVCASGYTKMIFNQTALARTIPVCIPN 187

                          90
                  ....*....|...
gi 2082544809 196 SRIALYKKIYNNA 208
Cdd:PHA03399  188 RLANLYSRIYNTV 200
 
Name Accession Description Interval E-value
pif3 PHA03399
per os infectivity factor 3; Provisional
 116-208 2.26e-45

per os infectivity factor 3; Provisional


Pssm-ID: 223076  Cd Length: 200  Bit Score: 149.28  E-value: 2.26e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082544809 116 IN*FAASEFV*NQM*VSTYRDLFDDLGEPRPYLCgSGGQLDVNLTNRQFSVNDCRCADGYIRMVFNQTALARSVPVCIPA 195
Cdd:PHA03399  109 IKVFTASEFVVNQLCISTYRDIVDDDGELRPYVC-ENGTLDIDLENRPFSVDDCVCASGYTKMIFNQTALARTIPVCIPN 187

                          90
                  ....*....|...
gi 2082544809 196 SRIALYKKIYNNA 208
Cdd:PHA03399  188 RLANLYSRIYNTV 200
PIF3 pfam05006
Per os infectivity factor 3; This family contains viral proteins and includes Baculovirus Per ...
 120-201 2.05e-27

Per os infectivity factor 3; This family contains viral proteins and includes Baculovirus Per os infectivity factor 3 (PIF3). PIF3 forms a complex on the occlusion-derived virus surface with PIF1, PIF2, and P74 which has an essential function in the initial stages of baculovirus oral infection.


Pssm-ID: 368236  Cd Length: 149  Bit Score: 101.46  E-value: 2.05e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082544809 120 AASEFV*NQM*VSTYRDLFDDLGEPRPYLCgSGGQLDVNLTNRQFSVNDCRCADGYIRMVFNQTALARSVPVCIPASRIA 199
Cdd:pfam05006  68 AVPEFVIKQLCLSTYRDVFTDDDKLRPYVC-AGGSIDINLVTQFFSPDACVCPDGYTKMLYRQTPYIRTIPVCVPNNLAN 146


                  ..
gi 2082544809 200 LY 201
Cdd:pfam05006 147 LY 148
 
Name Accession Description Interval E-value
pif3 PHA03399
per os infectivity factor 3; Provisional
 116-208 2.26e-45

per os infectivity factor 3; Provisional


Pssm-ID: 223076  Cd Length: 200  Bit Score: 149.28  E-value: 2.26e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082544809 116 IN*FAASEFV*NQM*VSTYRDLFDDLGEPRPYLCgSGGQLDVNLTNRQFSVNDCRCADGYIRMVFNQTALARSVPVCIPA 195
Cdd:PHA03399  109 IKVFTASEFVVNQLCISTYRDIVDDDGELRPYVC-ENGTLDIDLENRPFSVDDCVCASGYTKMIFNQTALARTIPVCIPN 187

                          90
                  ....*....|...
gi 2082544809 196 SRIALYKKIYNNA 208
Cdd:PHA03399  188 RLANLYSRIYNTV 200
PIF3 pfam05006
Per os infectivity factor 3; This family contains viral proteins and includes Baculovirus Per ...
 120-201 2.05e-27

Per os infectivity factor 3; This family contains viral proteins and includes Baculovirus Per os infectivity factor 3 (PIF3). PIF3 forms a complex on the occlusion-derived virus surface with PIF1, PIF2, and P74 which has an essential function in the initial stages of baculovirus oral infection.


Pssm-ID: 368236  Cd Length: 149  Bit Score: 101.46  E-value: 2.05e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2082544809 120 AASEFV*NQM*VSTYRDLFDDLGEPRPYLCgSGGQLDVNLTNRQFSVNDCRCADGYIRMVFNQTALARSVPVCIPASRIA 199
Cdd:pfam05006  68 AVPEFVIKQLCLSTYRDVFTDDDKLRPYVC-AGGSIDINLVTQFFSPDACVCPDGYTKMLYRQTPYIRTIPVCVPNNLAN 146


                  ..
gi 2082544809 200 LY 201
Cdd:pfam05006 147 LY 148
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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