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Conserved domains on  [gi|1498916832|gb|RMM11762|]
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hypothetical protein APX70_04990 [Pseudomonas syringae pv. maculicola]

Protein Classification

aminoglycoside phosphotransferase family protein( domain architecture ID 10007012)

aminoglycoside phosphotransferase family protein catalyzes the phosphorylation of small molecule substrates such as aminoglycoside antibiotics and N-acetylhexosamine; similar to Neisseria meningitidis N-acetylmuramate/N-acetylglucosamine kinase

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
COG3178 COG3178
Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family [General ...
14-305 3.81e-146

Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family [General function prediction only];


:

Pssm-ID: 442411  Cd Length: 327  Bit Score: 413.83  E-value: 3.81e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  14 FRWEGGARTFIVMDAPPPQENCKPFVDIAHLLEKSGINVPKIYAEDLTQGFLLLNDLGRQTYLDVIDAD-NADGLFAEAI 92
Cdd:COG3178    36 FRLTLGDRSAILMDAPPEKEDVRPFVAIARLLRAAGLSVPEILAADLEQGFLLLEDLGDTTLLDALDAGeNADELYRAAI 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  93 EALLAFQQLPMDAPLPSYDEALLRRELELFPEWYVKRHLGVEMDEAQLADWQQVSQLLINSALAQPKVLVHRDYMPRNLM 172
Cdd:COG3178   116 DALARLQAAPAPADLPPYDEALLLRELDLFPDWYLPRHLGLPLDDAERAELEAAFEALLDSLLAQPRVLVHRDFHSRNLM 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832 173 I-SEPNPGVLDFQDAVYGPVTYDVTCLFKDAFLSWPQERVSDWLRTYWDQARTLGIPVqeDFAAFERASDLMGVQRHLKV 251
Cdd:COG3178   196 VlPDGRPGLIDFQDAVLGPPAYDLVSLLRDAYVDWPEELVEALLDRYLAAARAALPPF--DFAAFLRAYALMGLQRHLKI 273
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1498916832 252 IGIFARICHRDGKPRYLADVPRFFAYIEAVLSKRPELAQLGQLLTSLQQPAETA 305
Cdd:COG3178   274 LGIFARLALRDGKPGYLADIPRVLRYLRRVLAHYPELAPLARWLDELVLPALQV 327
 
Name Accession Description Interval E-value
COG3178 COG3178
Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family [General ...
14-305 3.81e-146

Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family [General function prediction only];


Pssm-ID: 442411  Cd Length: 327  Bit Score: 413.83  E-value: 3.81e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  14 FRWEGGARTFIVMDAPPPQENCKPFVDIAHLLEKSGINVPKIYAEDLTQGFLLLNDLGRQTYLDVIDAD-NADGLFAEAI 92
Cdd:COG3178    36 FRLTLGDRSAILMDAPPEKEDVRPFVAIARLLRAAGLSVPEILAADLEQGFLLLEDLGDTTLLDALDAGeNADELYRAAI 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  93 EALLAFQQLPMDAPLPSYDEALLRRELELFPEWYVKRHLGVEMDEAQLADWQQVSQLLINSALAQPKVLVHRDYMPRNLM 172
Cdd:COG3178   116 DALARLQAAPAPADLPPYDEALLLRELDLFPDWYLPRHLGLPLDDAERAELEAAFEALLDSLLAQPRVLVHRDFHSRNLM 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832 173 I-SEPNPGVLDFQDAVYGPVTYDVTCLFKDAFLSWPQERVSDWLRTYWDQARTLGIPVqeDFAAFERASDLMGVQRHLKV 251
Cdd:COG3178   196 VlPDGRPGLIDFQDAVLGPPAYDLVSLLRDAYVDWPEELVEALLDRYLAAARAALPPF--DFAAFLRAYALMGLQRHLKI 273
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1498916832 252 IGIFARICHRDGKPRYLADVPRFFAYIEAVLSKRPELAQLGQLLTSLQQPAETA 305
Cdd:COG3178   274 LGIFARLALRDGKPGYLADIPRVLRYLRRVLAHYPELAPLARWLDELVLPALQV 327
APH pfam01636
Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance ...
17-228 8.26e-30

Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.


Pssm-ID: 426359 [Multi-domain]  Cd Length: 239  Bit Score: 112.98  E-value: 8.26e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  17 EGGARTFIVMDAPP--PQENCKPFVDIAHLLEKSGI-NVPKIYAEDLTQ-----GFLLLNDLGRQTYLDVIDADNADGLF 88
Cdd:pfam01636  17 TTGDGRYVLRLPPPgrAAEELRRELALLRHLAAAGVpPVPRVLAGCTDAellglPFLLMEYLPGEVLARPLLPEERGALL 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  89 AEAIEALLAFQQLPMDAPLPSYDEALLRRELELFPEWYvKRHLGVEMDEAQLADWQQVSQLLINSALA-QPKVLVHRDYM 167
Cdd:pfam01636  97 EALGRALARLHAVDPAALPLAGRLARLLELLRQLEAAL-ARLLAAELLDRLEELEERLLAALLALLPAeLPPVLVHGDLH 175
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1498916832 168 PRNLMISEPNP--GVLDFQDAVYGPVTYDVTCLFKDaflsWPQERVSDWLRTYWDQARTLGIP 228
Cdd:pfam01636 176 PGNLLVDPGGRvsGVIDFEDAGLGDPAYDLAILLNS----WGRELGAELLAAYLAAYGAFGYA 234
APH_ChoK_like cd05120
Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ...
18-199 2.88e-03

Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270690 [Multi-domain]  Cd Length: 158  Bit Score: 37.67  E-value: 2.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  18 GGARTFIVMDAP------PPQENCKPFVD----IAHLLEKSGINVPKIYA--EDLTQGFLLLNDLGRQTYLDVIDADNAD 85
Cdd:cd05120    10 GDNKVYLLGDPReyvlkiGPPRLKKDLEKeaamLQLLAGKLSLPVPKVYGfgESDGWEYLLMERIEGETLSEVWPRLSEE 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  86 --GLFAEAI-EALLAFQQLPMdaplpsydeallrrelelfpewyvkrhlgvemdeaqladwqqvsqllinsalaqpKVLV 162
Cdd:cd05120    90 ekEKIADQLaEILAALHRIDS-------------------------------------------------------SVLT 114
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1498916832 163 HRDYMPRNLMISEPNP--GVLDFQDAVYGPVTYDVTCLF 199
Cdd:cd05120   115 HGDLHPGNILVKPDGKlsGIIDWEFAGYGPPAFDYAAAL 153
CHK smart00587
ZnF_C4 abd HLH domain containing kinases domain; subfamily of choline kinases
117-199 9.76e-03

ZnF_C4 abd HLH domain containing kinases domain; subfamily of choline kinases


Pssm-ID: 214734  Cd Length: 196  Bit Score: 36.54  E-value: 9.76e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  117 RELELFPEWYVKRHLG--VEMDEAQLADWQQVSQlliNSALAQPKVLVHRDYMPRNLMISEPNPGVL------DFQDAVY 188
Cdd:smart00587  79 RELLSQPELLKVEEYIekLDKLLDNLEDLKKEDK---EPDEGEFNVLNHGDLWANNIMFKYDDEGKPedvaliDFQLSHY 155
                           90
                   ....*....|.
gi 1498916832  189 GPVTYDVTCLF 199
Cdd:smart00587 156 GSPAEDLHYFL 166
 
Name Accession Description Interval E-value
COG3178 COG3178
Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family [General ...
14-305 3.81e-146

Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family [General function prediction only];


Pssm-ID: 442411  Cd Length: 327  Bit Score: 413.83  E-value: 3.81e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  14 FRWEGGARTFIVMDAPPPQENCKPFVDIAHLLEKSGINVPKIYAEDLTQGFLLLNDLGRQTYLDVIDAD-NADGLFAEAI 92
Cdd:COG3178    36 FRLTLGDRSAILMDAPPEKEDVRPFVAIARLLRAAGLSVPEILAADLEQGFLLLEDLGDTTLLDALDAGeNADELYRAAI 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  93 EALLAFQQLPMDAPLPSYDEALLRRELELFPEWYVKRHLGVEMDEAQLADWQQVSQLLINSALAQPKVLVHRDYMPRNLM 172
Cdd:COG3178   116 DALARLQAAPAPADLPPYDEALLLRELDLFPDWYLPRHLGLPLDDAERAELEAAFEALLDSLLAQPRVLVHRDFHSRNLM 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832 173 I-SEPNPGVLDFQDAVYGPVTYDVTCLFKDAFLSWPQERVSDWLRTYWDQARTLGIPVqeDFAAFERASDLMGVQRHLKV 251
Cdd:COG3178   196 VlPDGRPGLIDFQDAVLGPPAYDLVSLLRDAYVDWPEELVEALLDRYLAAARAALPPF--DFAAFLRAYALMGLQRHLKI 273
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1498916832 252 IGIFARICHRDGKPRYLADVPRFFAYIEAVLSKRPELAQLGQLLTSLQQPAETA 305
Cdd:COG3178   274 LGIFARLALRDGKPGYLADIPRVLRYLRRVLAHYPELAPLARWLDELVLPALQV 327
APH pfam01636
Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance ...
17-228 8.26e-30

Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.


Pssm-ID: 426359 [Multi-domain]  Cd Length: 239  Bit Score: 112.98  E-value: 8.26e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  17 EGGARTFIVMDAPP--PQENCKPFVDIAHLLEKSGI-NVPKIYAEDLTQ-----GFLLLNDLGRQTYLDVIDADNADGLF 88
Cdd:pfam01636  17 TTGDGRYVLRLPPPgrAAEELRRELALLRHLAAAGVpPVPRVLAGCTDAellglPFLLMEYLPGEVLARPLLPEERGALL 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  89 AEAIEALLAFQQLPMDAPLPSYDEALLRRELELFPEWYvKRHLGVEMDEAQLADWQQVSQLLINSALA-QPKVLVHRDYM 167
Cdd:pfam01636  97 EALGRALARLHAVDPAALPLAGRLARLLELLRQLEAAL-ARLLAAELLDRLEELEERLLAALLALLPAeLPPVLVHGDLH 175
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1498916832 168 PRNLMISEPNP--GVLDFQDAVYGPVTYDVTCLFKDaflsWPQERVSDWLRTYWDQARTLGIP 228
Cdd:pfam01636 176 PGNLLVDPGGRvsGVIDFEDAGLGDPAYDLAILLNS----WGRELGAELLAAYLAAYGAFGYA 234
YcbJ COG3173
Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction ...
41-240 1.10e-07

Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction only];


Pssm-ID: 442406 [Multi-domain]  Cd Length: 284  Bit Score: 52.04  E-value: 1.10e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  41 IAHLLEKSGINVPKIYA-----EDLTQGFLLLNDL-GR--QTYLDVIDADNADGLFAEAIEALLAFQQLPMDAP-LPSYD 111
Cdd:COG3173    67 LRALAPRLGVPVPRPLAlgedgEVIGAPFYVMEWVeGEtlEDALPDLSPAERRALARALGEFLAALHAVDPAAAgLADGR 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832 112 EALLRRELELFPEWY---VKRHLGVEMDEAQLADWqqvsqLLINSALAQPKVLVHRDYMPRNLMISEPNP---GVLDFQD 185
Cdd:COG3173   147 PEGLERQLARWRAQLrraLARTDDLPALRERLAAW-----LAANLPEWGPPVLVHGDLRPGNLLVDPDDGrltAVIDWEL 221
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1498916832 186 AVYGPVTYDVTclfkdaflswpqervsdWLRTYWDQARTLGIPVQEDFAAFERAS 240
Cdd:COG3173   222 ATLGDPAADLA-----------------YLLLYWRLPDDLLGPRAAFLAAYEEAT 259
SrkA COG2334
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist [Signal ...
97-218 2.04e-05

Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist [Signal transduction mechanisms]; Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 441905 [Multi-domain]  Cd Length: 297  Bit Score: 45.30  E-value: 2.04e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  97 AFQQLPMDAPLPSYDEALLRRELELFpewyvkrhlgvemdEAQLADWQQvsqllinsalAQPKVLVHRDYMPRNLMISEP 176
Cdd:COG2334   141 LLERLLGPLLPDPEDRALLEELLDRL--------------EARLAPLLG----------ALPRGVIHGDLHPDNVLFDGD 196
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1498916832 177 N-PGVLDFQDAVYGPVTYDV-TCLFKDAFLSWPQERVSDWLRTY 218
Cdd:COG2334   197 GvSGLIDFDDAGYGPRLYDLaIALNGWADGPLDPARLAALLEGY 240
CotS COG0510
Thiamine kinase or a related kinase [Coenzyme transport and metabolism];
153-218 5.98e-04

Thiamine kinase or a related kinase [Coenzyme transport and metabolism];


Pssm-ID: 440276 [Multi-domain]  Cd Length: 156  Bit Score: 39.76  E-value: 5.98e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1498916832 153 SALAQPKVLVHRDYMPRNLMIS-EPNPGVLDFQDAVYGPVTYDVTCLFKDAFLSWPQERvsDWLRTY 218
Cdd:COG0510    43 AARPLPLVLCHGDLHPGNFLVTdDGRLYLIDWEYAGLGDPAFDLAALLVEYGLSPEQAE--ELLEAY 107
APH_ChoK_like cd05120
Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ...
18-199 2.88e-03

Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270690 [Multi-domain]  Cd Length: 158  Bit Score: 37.67  E-value: 2.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  18 GGARTFIVMDAP------PPQENCKPFVD----IAHLLEKSGINVPKIYA--EDLTQGFLLLNDLGRQTYLDVIDADNAD 85
Cdd:cd05120    10 GDNKVYLLGDPReyvlkiGPPRLKKDLEKeaamLQLLAGKLSLPVPKVYGfgESDGWEYLLMERIEGETLSEVWPRLSEE 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  86 --GLFAEAI-EALLAFQQLPMdaplpsydeallrrelelfpewyvkrhlgvemdeaqladwqqvsqllinsalaqpKVLV 162
Cdd:cd05120    90 ekEKIADQLaEILAALHRIDS-------------------------------------------------------SVLT 114
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1498916832 163 HRDYMPRNLMISEPNP--GVLDFQDAVYGPVTYDVTCLF 199
Cdd:cd05120   115 HGDLHPGNILVKPDGKlsGIIDWEFAGYGPPAFDYAAAL 153
HomoserineK_II cd05153
Type II Homoserine Kinase; This subfamily is composed of unusual homoserine kinases, from a ...
38-195 9.22e-03

Type II Homoserine Kinase; This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270702 [Multi-domain]  Cd Length: 300  Bit Score: 37.24  E-value: 9.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  38 FVDIAHLLEKSGINVPKIYAedLTQGFLLLNDLGR----QTYLDVIDADNADGLFAEAIEALLA-FQQLPMDAPLPSYDE 112
Cdd:cd05153    57 ELELLDHLAQAGLPVPRPLA--DKDGELLGELNGKpaalFPFLPGESLTTPTPEQCRAIGAALArLHLALAGFPPPRPNP 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832 113 ALLRRELELFPEwyVKRHLGVEMD------EAQLADWQQV--SQLlinsalaqPKVLVHRDYMPRNLMISEPN-PGVLDF 183
Cdd:cd05153   135 RGLAWWKPLAER--LKARLDLLAAddrallEDELARLQALapSDL--------PRGVIHADLFRDNVLFDGDRlSGIIDF 204
                         170
                  ....*....|..
gi 1498916832 184 QDAVYGPVTYDV 195
Cdd:cd05153   205 YDACYDPLLYDL 216
CHK smart00587
ZnF_C4 abd HLH domain containing kinases domain; subfamily of choline kinases
117-199 9.76e-03

ZnF_C4 abd HLH domain containing kinases domain; subfamily of choline kinases


Pssm-ID: 214734  Cd Length: 196  Bit Score: 36.54  E-value: 9.76e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1498916832  117 RELELFPEWYVKRHLG--VEMDEAQLADWQQVSQlliNSALAQPKVLVHRDYMPRNLMISEPNPGVL------DFQDAVY 188
Cdd:smart00587  79 RELLSQPELLKVEEYIekLDKLLDNLEDLKKEDK---EPDEGEFNVLNHGDLWANNIMFKYDDEGKPedvaliDFQLSHY 155
                           90
                   ....*....|.
gi 1498916832  189 GPVTYDVTCLF 199
Cdd:smart00587 156 GSPAEDLHYFL 166
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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