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Conserved domains on  [gi|2130626261|gb|UEK75818|]
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ATP synthase F0 subunit 6 (mitochondrion) [Coptotettix longtanensis]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 1.34e-84

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 250.47  E-value: 1.34e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSNTMSINWLSTWMFIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  81 MNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2130626261 161 AANMIAGHLLLTLLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSNEIN 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 1.34e-84

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 250.47  E-value: 1.34e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSNTMSINWLSTWMFIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  81 MNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2130626261 161 AANMIAGHLLLTLLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSNEIN 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 1.64e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 155.83  E-value: 1.64e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   5 LFSSFDPSTSNTMSIN------WLSTWMFIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTL 78
Cdd:TIGR01131   1 LFSQFDISPITLFSLTllslilLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  79 IMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSI 158
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626261 159 RLAANMIAGHLLLTLLGNTGNKLNEILLLGMLAIQLALLIL-ESAVSIIQAYVFSLLLTLYSNEIN 223
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLILVALIIlEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-220 1.43e-40

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 135.99  E-value: 1.43e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  65 NKGSTLLFISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCI 144
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626261 145 ETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSN 220
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
21-218 1.18e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 96.40  E-value: 1.18e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  21 WLSTWMFIVMIPTSYWMIK----SRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFI-SLFTLIMMNNTMGLF---PYIF 92
Cdd:pfam00119   5 LIVALILLLFLLLATRKTKklvpGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLlTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  93 TSSSHMVMTLSLALPMWLSFNLFG-WINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIRLAANMIAGH--- 168
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHlll 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 2130626261 169 LLLTLLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLY 218
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVY 214
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 37-218 2.35e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 79.73  E-value: 2.35e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  37 MIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFG 116
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYG 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261 117 -WINKTNHMFEHLVPMGTPPvLMPFMVCIETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNKLNEILLLGMlaIQLA 195
Cdd:COG0356   106 iKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLL--LPVA 182

                         170       180
                  ....*....|....*....|...
gi 2130626261 196 LLILESAVSIIQAYVFSLLLTLY 218
Cdd:COG0356   183 WTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-223 1.34e-84

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 250.47  E-value: 1.34e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSNTMSINWLSTWMFIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIM 80
Cdd:MTH00157    1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  81 MNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIRL 160
Cdd:MTH00157   81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2130626261 161 AANMIAGHLLLTLLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSNEIN 223
Cdd:MTH00157  161 AANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-223 1.64e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 155.83  E-value: 1.64e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   5 LFSSFDPSTSNTMSIN------WLSTWMFIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTL 78
Cdd:TIGR01131   1 LFSQFDISPITLFSLTllslilLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  79 IMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSI 158
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626261 159 RLAANMIAGHLLLTLLGNTGNKLNEILLLGMLAIQLALLIL-ESAVSIIQAYVFSLLLTLYSNEIN 223
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLILVALIIlEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-221 1.92e-46

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 153.26  E-value: 1.92e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSN---TMSINWLSTWMFIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFT 77
Cdd:MTH00176    1 MLVDLFSSFDPPNKNifsMISLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  78 LIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLS 157
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2130626261 158 IRLAANMIAGHLLLT---LLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSNE 221
Cdd:MTH00176  161 VRLAANLSAGHLLLGllgAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-221 1.68e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 143.33  E-value: 1.68e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSNTM-----SINWLSTWMFIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISL 75
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFnnlssTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  76 FTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGT 155
Cdd:MTH00005   81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2130626261 156 LSIRLAANMIAGHLLLTLL------GNTGNKLNEILLLgmlAIQLALLILESAVSIIQAYVFSLLLTLYSNE 221
Cdd:MTH00005  161 LSFRLAANMSAGHIVLSLIgiyaasALFSSISSTILLI---LTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 65-220 1.43e-40

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 135.99  E-value: 1.43e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  65 NKGSTLLFISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCI 144
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626261 145 ETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSN 220
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-222 1.08e-39

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 136.15  E-value: 1.08e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSNTMSIN---WLSTWMFIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFT 77
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSLSflmWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  78 LIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLS 157
Cdd:MTH00173   81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2130626261 158 IRLAANMIAGHLLLT----LLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSNEI 222
Cdd:MTH00173  161 VRLLANISAGHIVLTlignYLSSSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-221 1.22e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 122.75  E-value: 1.22e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSNTMSINWLSTWMFIVMIPTSYWM-IKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLI 79
Cdd:MTH00179    1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTNRwLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  80 MMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIR 159
Cdd:MTH00179   81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2130626261 160 LAANMIAGHLLLTLLGNTGNKLNEI---LLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSNE 221
Cdd:MTH00179  161 LTANITAGHLLMHLISSAVFVLMNFmgmVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-221 3.20e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 119.16  E-value: 3.20e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSNTMSINWLSTWMFIVMIPT-SYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLI 79
Cdd:MTH00120    1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSpKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  80 MMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIR 159
Cdd:MTH00120   81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2130626261 160 LAANMIAGHL---LLTLLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSNE 221
Cdd:MTH00120  161 LTANLTAGHLliqLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-218 7.01e-32

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 115.84  E-value: 7.01e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   3 TNLFSSFDPSTSNTMSINWLS-----TWMFIvMIPTSYwmIKSRPNMLMEIMMkkmNSELNAILNNKNKGS---TLLFIS 74
Cdd:MTH00035    5 NSIFGQFSPDTILFIPLTLLSsvialSWLFF-INPTNW--LPSRSQSIWLTFR---QEILKLIFQNTNPNTapwAGLLTT 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  75 LFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPG 154
Cdd:MTH00035   79 VFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPI 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626261 155 TLSIRLAANMIAGHLLLTLLGNTGNKLNEILLLGMLAIQLALL--ILESAVSIIQAYVFSLLLTLY 218
Cdd:MTH00035  159 ALGLRLAANLTAGHLLIFLLSTAIWELSNSPLISIITLIIFFLlfILEIGVACIQAYVFTALVHFY 224
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-221 3.13e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 108.90  E-value: 3.13e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSNTMSINWLSTWM--FIVMIPTSYWMiKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTL 78
Cdd:MTH00073    1 MNLSFFDQFLSPTLLGIPLIMLAMLLpwLLFPTPTNKWL-NNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  79 IMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSI 158
Cdd:MTH00073   80 LITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGV 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626261 159 RLAANMIAGHL---LLTLLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLYSNE 221
Cdd:MTH00073  160 RLTANLTAGHLliqLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 70-221 4.32e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 105.73  E-value: 4.32e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  70 LLFISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETIST 149
Cdd:MTH00132   71 LLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626261 150 LIRPGTLSIRLAANMIAGHLLLTLLGNTGNKLNEIL----LLGMlAIQLALLILESAVSIIQAYVFSLLLTLYSNE 221
Cdd:MTH00132  151 FIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMptvaILTA-TLLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-218 1.12e-27

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 104.65  E-value: 1.12e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261   1 MMTNLFSSFDPSTSNTMSINWLSTWMFIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIM 80
Cdd:MTH00101    1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  81 MNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIRL 160
Cdd:MTH00101   81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2130626261 161 AANMIAGHLLLTLLGNTGNKLNEILL---LGMLAIQLALLILESAVSIIQAYVFSLLLTLY 218
Cdd:MTH00101  161 TANITAGHLLIHLIGGATLALMSISTttaLITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP-synt_A pfam00119
ATP synthase A chain;
21-218 1.18e-24

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 96.40  E-value: 1.18e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  21 WLSTWMFIVMIPTSYWMIK----SRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFI-SLFTLIMMNNTMGLF---PYIF 92
Cdd:pfam00119   5 LIVALILLLFLLLATRKTKklvpGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLlTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  93 TSSSHMVMTLSLALPMWLSFNLFG-WINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIRLAANMIAGH--- 168
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGiKKHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHlll 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 2130626261 169 LLLTLLGNTGNKLNEILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLY 218
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVY 214
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 36-218 2.15e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 96.61  E-value: 2.15e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  36 WMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLF 115
Cdd:MTH00175   50 KLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLL 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261 116 GWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNKL--NEILLLGM--LA 191
Cdd:MTH00175  130 GFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMlsNGLIILSLfpML 209

                         170       180
                  ....*....|....*....|....*..
gi 2130626261 192 IQLALLILESAVSIIQAYVFSLLLTLY 218
Cdd:MTH00175  210 IMIFITLLEMAVAVIQAYVFCLLTTIY 236
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 27-218 1.51e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 91.64  E-value: 1.51e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  27 FIVMIPTSYWMIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLAL 106
Cdd:MTH00172   30 VVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSF 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261 107 PMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNKL---NE 183
Cdd:MTH00172  110 SIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMlcaSG 189

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 2130626261 184 ILLLGMLAIQLALLILESAVSIIQAYVFSLLLTLY 218
Cdd:MTH00172  190 FLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 37-218 2.35e-18

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 79.73  E-value: 2.35e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  37 MIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFG 116
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYG 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261 117 -WINKTNHMFEHLVPMGTPPvLMPFMVCIETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNKLNEILLLGMlaIQLA 195
Cdd:COG0356   106 iKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLL--LPVA 182

                         170       180
                  ....*....|....*....|...
gi 2130626261 196 LLILESAVSIIQAYVFSLLLTLY 218
Cdd:COG0356   183 WTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 37-218 1.08e-17

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 78.83  E-value: 1.08e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  37 MIKSRPNMLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFG 116
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAG 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261 117 WINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNKL-NEILLLGMLA---I 192
Cdd:MTH00174  139 LITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMiNTGILIGSFVpfaI 218

                         170       180
                  ....*....|....*....|....*.
gi 2130626261 193 QLALLILESAVSIIQAYVFSLLLTLY 218
Cdd:MTH00174  219 LIFVTILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 44-218 9.25e-16

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 73.29  E-value: 9.25e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  44 MLMEIMMKKMNSELNAILNNKNKGSTLLFISLFTLIMMNNTMGLFP-YIFTSSSHMVMTLSLALPMWLSFNLFG-WINKT 121
Cdd:PRK05815   48 NFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGL 127

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261 122 NHMFEHLVPmgtppVLMPFMVCIETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNkLNEILLLGMLAIQLALLILES 201
Cdd:PRK05815  128 GGYLKEFYL-----QPHPLLLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGG-AGLLLALAPLILPVAWTIFEI 201

                         170
                  ....*....|....*..
gi 2130626261 202 AVSIIQAYVFSLLLTLY 218
Cdd:PRK05815  202 FVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 73-218 4.30e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 52.44  E-value: 4.30e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  73 ISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALpmwlsFNLFgwINKTNHM--------FEHLVPmGTPPVLMPFMVCI 144
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV-----FTFF--ITQYAAIkahgikgyLAHLTG-GTHWSLWIIMIPI 246

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626261 145 ETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNKLNE-ILLLGMLA-IQLALLILESAVSIIQAYVFSLLLTLY 218
Cdd:PRK13419  247 EFIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILKSyIVAVAVSVpFAIFIYLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 68-167 2.01e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 46.42  E-value: 2.01e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  68 STLLFISLFTLIMMNntmglFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETI 147
Cdd:MTH00050   27 SVVLFIVLFLFLLYR-----LPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETI 101

                          90       100
                  ....*....|....*....|
gi 2130626261 148 STLIRPGTLSIRLAANMIAG 167
Cdd:MTH00050  102 SYIIRPVVLILRPFINISLG 121
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 62-221 5.29e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 45.35  E-value: 5.29e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  62 NNKNKGSTLLFISLFTLIMMNNTMGLFPYIFTSSSHMVMTLSLALPMWLSFNLFGWINKTnhMFEHLVPMGTPPVLMPF- 140
Cdd:MTH00087   45 SNKLPLSSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFs 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261 141 MVCIETISTLIRPGTLSIRLAANMIAGHLLLTLLGNTGNKLNEILLLgmlaiqlaLLILESAVSIIQAYVFSLLLTLYSN 220
Cdd:MTH00087  123 MLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSIL--------AIMMECFVAFIQSYIFSRLIYLYLN 194


                  .
gi 2130626261 221 E 221
Cdd:MTH00087  195 E 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 93-218 9.56e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 42.57  E-value: 9.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626261  93 TSSSHMVMTLSLALPMWLSFNLFGWINKTNHMFEHLVPMGTPPVLMPFMVCIETISTLI-RPGTLSIRLAANMIAGHLLL 171
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIVSPMaKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2130626261 172 TLLGNTGNKLNEILLLGMLAIQLALL-ILESAVSIIQAYVFSLLLTLY 218
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIyVLEIFVAFLQAYIFVLLTSLF 344
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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