|
Name |
Accession |
Description |
Interval |
E-value |
| ND3 |
MTH00161 |
NADH dehydrogenase subunit 3; Provisional |
3-115 |
3.59e-32 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177217 [Multi-domain] Cd Length: 113 Bit Score: 109.10 E-value: 3.59e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 3 LLLTTMMISLTLPIMMITISKMISKKMISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPIMK 82
Cdd:MTH00161 1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80
|
90 100 110
....*....|....*....|....*....|...
gi 2130626263 83 TSEMKFWWITSSIFIIILLIGIYYEWNQGMLKW 115
Cdd:MTH00161 81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
|
|
| ND3 |
MTH00202 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
2.77e-28 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214455 [Multi-domain] Cd Length: 117 Bit Score: 99.30 E-value: 2.77e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 1 MTLLLTTMMISLTLPIMMITISKMISKKMISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPI 80
Cdd:MTH00202 1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 2130626263 81 MKTSEMKFWWITSSIFIIILLIGIYYEWNQGMLKWA 116
Cdd:MTH00202 81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
|
|
| ND3 |
MTH00136 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
1.45e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177194 [Multi-domain] Cd Length: 116 Bit Score: 94.99 E-value: 1.45e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 1 MTLLLTTMMISLTLPIMMITISKMISKkMISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLvPI 80
Cdd:MTH00136 1 MNLITTILTITIALSLILAIVSFWLPQ-MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPL-PW 78
|
90 100 110
....*....|....*....|....*....|....*....
gi 2130626263 81 ---MKTSEMKFWWitSSIFIIILLIGIYYEWNQGMLKWA 116
Cdd:MTH00136 79 gdqLPSPLLTFFW--ATAVLILLTLGLIYEWLQGGLEWA 115
|
|
| ND3 |
MTH00148 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
6.86e-26 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214433 [Multi-domain] Cd Length: 117 Bit Score: 93.38 E-value: 6.86e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 1 MTLLLTTMMISLTLPIMMITISKMISKKMISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPI 80
Cdd:MTH00148 1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 2130626263 81 MKTSEMKFWWITSSIFIIILLIGIYYEWNQGMLKWA 116
Cdd:MTH00148 81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
|
|
| ND3 |
MTH00012 |
NADH dehydrogenase subunit 3; Validated |
1-117 |
6.12e-24 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164588 [Multi-domain] Cd Length: 117 Bit Score: 88.38 E-value: 6.12e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 1 MTLLLTTMMISLTLPIMMITISKMISKKMISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPI 80
Cdd:MTH00012 1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80
|
90 100 110
....*....|....*....|....*....|....*..
gi 2130626263 81 MKTSEMKFWWITSSIFIIILLIGIYYEWNQGMLKWAT 117
Cdd:MTH00012 81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWSS 117
|
|
| ND3 |
MTH00069 |
NADH dehydrogenase subunit 3; Provisional |
3-116 |
1.11e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177141 [Multi-domain] Cd Length: 114 Bit Score: 87.74 E-value: 1.11e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 3 LLLTTMMISLTLPIMMITISKMISKkMISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPL---VP 79
Cdd:MTH00069 1 LIMLMLLISTILSLILITISFWLPL-NNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpwaSQ 79
|
90 100 110
....*....|....*....|....*....|....*..
gi 2130626263 80 IMKTSEMKFWwitSSIFIIILLIGIYYEWNQGMLKWA 116
Cdd:MTH00069 80 LNTPTNTLFW---STLILILLTLGLIYEWIQGGLEWA 113
|
|
| ND3 |
MTH00113 |
NADH dehydrogenase subunit 3; Provisional |
3-116 |
5.04e-23 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177175 [Multi-domain] Cd Length: 114 Bit Score: 86.09 E-value: 5.04e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 3 LLLTTMMISLTLPIMMITISKMISKkMISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPIMK 82
Cdd:MTH00113 2 NLISMLTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80
|
90 100 110
....*....|....*....|....*....|....
gi 2130626263 83 TSEMKFWWITSSIFIIILLIGIYYEWNQGMLKWA 116
Cdd:MTH00113 81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
|
|
| ND3 |
MTH00203 |
NADH dehydrogenase subunit 3; Provisional |
1-115 |
7.64e-22 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 214456 [Multi-domain] Cd Length: 112 Bit Score: 83.02 E-value: 7.64e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 1 MTLLLTTMMISLTLPIMMITISKMiSKKMISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPI 80
Cdd:MTH00203 1 MNLIMLFFLIALLLSLILLFIAFW-LPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79
|
90 100 110
....*....|....*....|....*....|....*
gi 2130626263 81 MKTSEMKFWWITSsiFIIILLIGIYYEWNQGMLKW 115
Cdd:MTH00203 80 NQLSSLSLLLAFL--FLILLTLGLIYEWLQGGLEW 112
|
|
| ND3 |
MTH00042 |
NADH dehydrogenase subunit 3; Validated |
1-116 |
4.18e-21 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 177117 [Multi-domain] Cd Length: 116 Bit Score: 81.18 E-value: 4.18e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 1 MTLLLTTMMISLTLPIMMITISKMISKKMIsDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPI 80
Cdd:MTH00042 1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79
|
90 100 110
....*....|....*....|....*....|....*.
gi 2130626263 81 MKTSEMKFWWITSSIFIIILLIGIYYEWNQGMLKWA 116
Cdd:MTH00042 80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWA 115
|
|
| ND3 |
MTH00106 |
NADH dehydrogenase subunit 3; Provisional |
1-116 |
4.42e-19 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177168 [Multi-domain] Cd Length: 115 Bit Score: 75.75 E-value: 4.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 1 MTLLLTtMMISLTLPIMMITISKMISKkMISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPI 80
Cdd:MTH00106 1 MNLMLT-LLTNTLLASLLVLIAFWLPQ-LNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78
|
90 100 110
....*....|....*....|....*....|....*.
gi 2130626263 81 MKTSEMKFWWITSSIFIIILLIGIYYEWNQGMLKWA 116
Cdd:MTH00106 79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
|
|
| Oxidored_q4 |
pfam00507 |
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; |
19-76 |
5.73e-19 |
|
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
Pssm-ID: 459838 [Multi-domain] Cd Length: 94 Bit Score: 74.77 E-value: 5.73e-19
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 2130626263 19 ITISKMISKKmISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLP 76
Cdd:pfam00507 1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFP 57
|
|
| NuoA |
COG0838 |
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ... |
10-76 |
9.17e-18 |
|
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440600 [Multi-domain] Cd Length: 117 Bit Score: 72.46 E-value: 9.17e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2130626263 10 ISLTLPIMMITISKMISKKMiSDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLP 76
Cdd:COG0838 14 VALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFP 79
|
|
| PRK06602 |
PRK06602 |
NADH:ubiquinone oxidoreductase subunit A; Validated |
8-116 |
1.26e-16 |
|
NADH:ubiquinone oxidoreductase subunit A; Validated
Pssm-ID: 180638 [Multi-domain] Cd Length: 121 Bit Score: 69.89 E-value: 1.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 8 MMISLTLPIMMITISKMISKKMiSDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPL-VPIMKTSEM 86
Cdd:PRK06602 15 LIVAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWaVSFREIGWL 93
|
90 100 110
....*....|....*....|....*....|
gi 2130626263 87 KFWwiTSSIFIIILLIGIYYEWNQGMLKWA 116
Cdd:PRK06602 94 GFV--EAMIFILVLLVGLVYLWRKGALDWE 121
|
|
| ND3 |
MTH00018 |
NADH dehydrogenase subunit 3; Validated |
4-115 |
1.25e-13 |
|
NADH dehydrogenase subunit 3; Validated
Pssm-ID: 164592 [Multi-domain] Cd Length: 113 Bit Score: 62.00 E-value: 1.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 4 LLTTMMISLTLPIMMITISKMISKKmISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLP-LVPIMK 82
Cdd:MTH00018 3 LFILLIFSVVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPwCVLYNQ 81
|
90 100 110
....*....|....*....|....*....|...
gi 2130626263 83 TSEMKFWwiTSSIFIIILLIGIYYEWNQGMLKW 115
Cdd:MTH00018 82 IAPFGFW--TMVGFLFILTLGLIYEWIKGGLEW 112
|
|
| ND3 |
MTH00055 |
NADH dehydrogenase subunit 3; Provisional |
8-115 |
2.24e-12 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177128 [Multi-domain] Cd Length: 118 Bit Score: 58.95 E-value: 2.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 8 MMISLTLPIMMITISKMISKKMiSDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPIMKTSEMK 87
Cdd:MTH00055 12 LLFSIGLSTVISGASYIVGVKQ-PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLF 90
|
90 100
....*....|....*....|....*...
gi 2130626263 88 FWWITsSIFIIILLIGIYYEWNQGMLKW 115
Cdd:MTH00055 91 GFWVM-YLFLIILTIGLIYEWVKGGLEW 117
|
|
| ND3 |
MTH00030 |
NADH dehydrogenase subunit 3; Provisional |
7-115 |
3.72e-11 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 164603 [Multi-domain] Cd Length: 123 Bit Score: 55.71 E-value: 3.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 7 TMMISLTLPIMMITISKMISKKMIS----DREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPIMK 82
Cdd:MTH00030 11 STLLGVGIILLLVSISFTLGNSRIGltkpDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFN 90
|
90 100 110
....*....|....*....|....*....|...
gi 2130626263 83 TSEMKFWWITSSIFIIILLIGIyYEWNQGMLKW 115
Cdd:MTH00030 91 QLNLFSFWIVYTFLIVLAIGLA-YEWIKGGLEW 122
|
|
| PRK07928 |
PRK07928 |
NADH dehydrogenase subunit A; Validated |
32-115 |
9.97e-08 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 181171 [Multi-domain] Cd Length: 119 Bit Score: 46.59 E-value: 9.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 32 DREKLSPFECGFSPKTHARLP--FSIQFFLISMLFLIFDIEIALMLPL------VPIMKTSEMKFWWITSSIFIIillig 103
Cdd:PRK07928 34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWavsfdaLGVFGLVEMALFMLTVFVAYA----- 108
|
90
....*....|..
gi 2130626263 104 iyYEWNQGMLKW 115
Cdd:PRK07928 109 --YVWRRGGLEW 118
|
|
| PRK08489 |
PRK08489 |
NAD(P)H-quinone oxidoreductase subunit 3; |
1-115 |
1.82e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 3;
Pssm-ID: 181448 [Multi-domain] Cd Length: 129 Bit Score: 43.50 E-value: 1.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 1 MTLLLTTMMISLTLPIMMITISKMISKKmiSDREKLSPFECGFSPKTHARlPFSIQFFLISMLFLIFDIEIALMLPLVPI 80
Cdd:PRK08489 15 VLLVLTFVAFFLTTRLARFISRKLAQKN--TEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVD 91
|
90 100 110
....*....|....*....|....*....|....*
gi 2130626263 81 MKTSEMkFWWITSSIFIIILLIGIYYEWNQGMLKW 115
Cdd:PRK08489 92 FKLLGL-FGLIEMLLFIVLLTIGFIYAWKKGALEW 125
|
|
| ndhC |
CHL00022 |
NADH dehydrogenase subunit 3 |
8-76 |
4.46e-05 |
|
NADH dehydrogenase subunit 3
Pssm-ID: 176964 [Multi-domain] Cd Length: 120 Bit Score: 39.59 E-value: 4.46e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2130626263 8 MMISLTLPIMMITISKMISKKMiSDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLP 76
Cdd:CHL00022 14 LIISSLIPILAFLISGLLAPIS-KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYP 81
|
|
| ND3 |
MTH00092 |
NADH dehydrogenase subunit 3; Provisional |
1-91 |
1.11e-04 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177155 Cd Length: 111 Bit Score: 38.34 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 1 MTLLLTTMMISLTLPIMMITISKMISKKMiSDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLPLVPI 80
Cdd:MTH00092 1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79
|
90
....*....|.
gi 2130626263 81 MKTSEMKFWWI 91
Cdd:MTH00092 80 DFSSLISFFML 90
|
|
| PRK07756 |
PRK07756 |
NADH-quinone oxidoreductase subunit A; |
8-76 |
1.85e-04 |
|
NADH-quinone oxidoreductase subunit A;
Pssm-ID: 169084 [Multi-domain] Cd Length: 122 Bit Score: 38.19 E-value: 1.85e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2130626263 8 MMISLTLPIMMITISKMISKKMISDrEKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLP 76
Cdd:PRK07756 16 LLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP 83
|
|
| ND3 |
MTH00060 |
NADH dehydrogenase subunit 3; Provisional |
30-75 |
1.29e-03 |
|
NADH dehydrogenase subunit 3; Provisional
Pssm-ID: 177132 Cd Length: 116 Bit Score: 35.64 E-value: 1.29e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2130626263 30 ISDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALML 75
Cdd:MTH00060 32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLL 77
|
|
| PRK06432 |
PRK06432 |
NADH dehydrogenase subunit A; Validated |
31-115 |
2.72e-03 |
|
NADH dehydrogenase subunit A; Validated
Pssm-ID: 102372 Cd Length: 144 Bit Score: 35.17 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626263 31 SDREKLSPFECGFSPKTHARLPFSIQFFLISMLFLIFDIEIALMLP-LVPIMKTSEMKFwwITSSIFIIILLIGIYYEWN 109
Cdd:PRK06432 59 SDQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPwAFDFKRLGLIPF--IETLIFLAMPLFAVYYAFK 136
|
....*.
gi 2130626263 110 QGMLKW 115
Cdd:PRK06432 137 MGYMRW 142
|
|
|