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Conserved domains on  [gi|2130626268|gb|UEK75825|]
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cytochrome b (mitochondrion) [Coptotettix longtanensis]

Protein Classification

cytochrome b/b6( domain architecture ID 11475928)

cytochrome b/b6 (PetB) is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme; cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes; in plants and cyanobacteria, cytochrome b6 is analogous to cytochrome b and contains two chains: helices A-D (encoded by petB) and helices E-H (encoded by petD)

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 13-366 0e+00

cytochrome b; Provisional


:

Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 666.48  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  13 KIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFF 92
Cdd:MTH00156    2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  93 ICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVD 172
Cdd:MTH00156   82 ICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVD 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 173 NPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLISLTYPYIMG 252
Cdd:MTH00156  162 NATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLG 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 253 DPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQIMFWNMTAT 332
Cdd:MTH00156  242 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNI 321

                         330       340       350
                  ....*....|....*....|....*....|....
gi 2130626268 333 VVLLTWVGKQPVEEPYITVGQALTMLYFSYFMMN 366
Cdd:MTH00156  322 VILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 13-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 666.48  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  13 KIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFF 92
Cdd:MTH00156    2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  93 ICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVD 172
Cdd:MTH00156   82 ICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVD 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 173 NPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLISLTYPYIMG 252
Cdd:MTH00156  162 NATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLG 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 253 DPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQIMFWNMTAT 332
Cdd:MTH00156  242 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNI 321

                         330       340       350
                  ....*....|....*....|....*....|....
gi 2130626268 333 VVLLTWVGKQPVEEPYITVGQALTMLYFSYFMMN 366
Cdd:MTH00156  322 VILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
17-375 1.70e-121

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 356.41  E-value: 1.70e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  17 NSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFFICLY 96
Cdd:COG1290    25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  97 LHIGRGLYYNSFmlKE----TWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVD 172
Cdd:COG1290   105 LHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 173 NPTLSRFFSLH-FILPFIIAAMVIIHLMFLHQTGSNNPLG----MNKNSEKIPFHPFYSIKDSITMIMLMMTLMLISLTY 247
Cdd:COG1290   183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 248 PyiMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQIM 325
Cdd:COG1290   263 P--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 2130626268 326 FWNMTATVVLLTWVGKQPveEPYITVGQALTMLYFSYFMMNTWVMKAWDK 375
Cdd:COG1290   341 GVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIEK 388
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 4.55e-94

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 279.64  E-value: 4.55e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  10 PLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  90 MFFICLYLHIGRGLYYNSFM--LKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2130626268 168 GFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 7.18e-85

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 255.77  E-value: 7.18e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  19 LIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFFICLYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  99 IGRGLYYNSF--MLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 2130626268 177 SRFFSLHFILPFIIAAMVIIHLMFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-340 2.64e-10

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 58.66  E-value: 2.64e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFY-NKSKFQGNQFYPINQIMFwnMTATVVLLt 337
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVATTVF--LFGTVVAL- 141


                  ...
gi 2130626268 338 WVG 340
Cdd:TIGR01156 142 WLG 144
 
Name Accession Description Interval E-value
CYTB MTH00156
cytochrome b; Provisional
 13-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 666.48  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  13 KIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFF 92
Cdd:MTH00156    2 KIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFF 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  93 ICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVD 172
Cdd:MTH00156   82 ICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVD 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 173 NPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLISLTYPYIMG 252
Cdd:MTH00156  162 NATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLG 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 253 DPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQIMFWNMTAT 332
Cdd:MTH00156  242 DPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNI 321

                         330       340       350
                  ....*....|....*....|....*....|....
gi 2130626268 333 VVLLTWVGKQPVEEPYITVGQALTMLYFSYFMMN 366
Cdd:MTH00156  322 VILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
CYTB MTH00145
cytochrome b; Provisional
 1-375 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 617.30  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   1 MKKPMRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLI 80
Cdd:MTH00145    1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  81 RTLHMNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00145   81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTL 240
Cdd:MTH00145  161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 241 MLISLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00145  241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2130626268 321 INQIMFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFMMNTWVMKAWDK 375
Cdd:MTH00145  321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDN 375
CYTB MTH00119
cytochrome b; Provisional
 1-365 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 611.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   1 MKKPMRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLI 80
Cdd:MTH00119    1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  81 RTLHMNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00119   81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTL 240
Cdd:MTH00119  161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 241 MLISLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00119  241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 2130626268 321 INQIMFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFMM 365
Cdd:MTH00119  321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
CYTB MTH00191
cytochrome b; Provisional
 5-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 605.37  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   5 MRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLH 84
Cdd:MTH00191    1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  85 MNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQW 164
Cdd:MTH00191   81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 165 IWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLIS 244
Cdd:MTH00191  161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 245 LTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQI 324
Cdd:MTH00191  241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 2130626268 325 MFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFMM 365
Cdd:MTH00191  321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
CYTB MTH00100
cytochrome b; Provisional
 4-361 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 601.24  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   4 PMRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTL 83
Cdd:MTH00100    3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  84 HMNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQ 163
Cdd:MTH00100   83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 164 WIWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLI 243
Cdd:MTH00100  163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 244 SLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQ 323
Cdd:MTH00100  243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322

                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 2130626268 324 IMFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFS 361
Cdd:MTH00100  323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFL 360
CYTB MTH00074
cytochrome b; Provisional
 1-365 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 597.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   1 MKKPMRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLI 80
Cdd:MTH00074    1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  81 RTLHMNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00074   81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTL 240
Cdd:MTH00074  161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 241 MLISLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00074  241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 2130626268 321 INQIMFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFMM 365
Cdd:MTH00074  321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFII 365
CYTB MTH00131
cytochrome b; Provisional
 5-364 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 595.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   5 MRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLH 84
Cdd:MTH00131    4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  85 MNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQW 164
Cdd:MTH00131   84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 165 IWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLIS 244
Cdd:MTH00131  164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 245 LTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQI 324
Cdd:MTH00131  244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 2130626268 325 MFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFM 364
Cdd:MTH00131  324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFL 363
CYTB MTH00016
cytochrome b; Validated
 1-378 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 594.73  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   1 MKKPMRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLI 80
Cdd:MTH00016    1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  81 RTLHMNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00016   81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTL 240
Cdd:MTH00016  161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 241 MLISLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00016  241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2130626268 321 INQIMFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFMMNTWVMKAWDKAIK 378
Cdd:MTH00016  321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
CYTB MTH00034
cytochrome b; Validated
 4-364 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 571.26  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   4 PMRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTL 83
Cdd:MTH00034    3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  84 HMNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQ 163
Cdd:MTH00034   83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 164 WIWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLI 243
Cdd:MTH00034  163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 244 SLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQ 323
Cdd:MTH00034  243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 2130626268 324 IMFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFM 364
Cdd:MTH00034  323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFL 363
CYTB MTH00224
cytochrome b; Provisional
 1-378 0e+00

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 508.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   1 MKKPMRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLI 80
Cdd:MTH00224    1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  81 RTLHMNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00224   81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTL 240
Cdd:MTH00224  161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 241 MLISLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00224  241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2130626268 321 INQIMFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFMMNTWVMKAWDKAIK 378
Cdd:MTH00224  321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
CYTB MTH00022
cytochrome b; Validated
 4-365 3.58e-176

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 494.99  E-value: 3.58e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   4 PMRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTL 83
Cdd:MTH00022    2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  84 HMNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQ 163
Cdd:MTH00022   82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 164 WIWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLI 243
Cdd:MTH00022  162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 244 SLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQ 323
Cdd:MTH00022  242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 2130626268 324 IMFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFMM 365
Cdd:MTH00022  322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLV 363
CYTB MTH00053
cytochrome b; Provisional
 1-365 1.58e-170

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 480.74  E-value: 1.58e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268   1 MKKPMRKNHPLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLI 80
Cdd:MTH00053    1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  81 RTLHMNGASMFFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQ 160
Cdd:MTH00053   81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 161 IVQWIWGGFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTL 240
Cdd:MTH00053  161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 241 MLISLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYP 320
Cdd:MTH00053  241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 2130626268 321 INQIMFWNMTATVVLLTWVGKQPVEEPYITVGQALTMLYFSYFMM 365
Cdd:MTH00053  321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
CYTB MTH00033
cytochrome b; Provisional
 17-365 1.55e-131

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 381.98  E-value: 1.55e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  17 NSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFFICLY 96
Cdd:MTH00033   13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  97 LHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTL 176
Cdd:MTH00033   93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 177 SRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLISLT--YPYIMGDP 254
Cdd:MTH00033  173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEprIETLLQDP 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 255 DNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQIMFWNMTATVV 334
Cdd:MTH00033  253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332

                         330       340       350
                  ....*....|....*....|....*....|..
gi 2130626268 335 LLTWVGKQPV-EEPYITVGQALTMLYFSYFMM 365
Cdd:MTH00033  333 ILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
CYTB MTH00086
cytochrome b; Provisional
 13-365 1.22e-129

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 375.82  E-value: 1.22e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  13 KIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFF 92
Cdd:MTH00086    1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  93 ICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVD 172
Cdd:MTH00086   81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 173 NPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKDsITMIMLMMTLMLISLTYPYIMG 252
Cdd:MTH00086  161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 253 DPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNkskFQGNQFYPINQIMFWNMTAT 332
Cdd:MTH00086  240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVN---NYTSCLNKLNKFLVFSFIVV 316

                         330       340       350
                  ....*....|....*....|....*....|...
gi 2130626268 333 VVLLTWVGKQPVEEPYITVGQALTMLYFSYFMM 365
Cdd:MTH00086  317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
17-375 1.70e-121

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 356.41  E-value: 1.70e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  17 NSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFFICLY 96
Cdd:COG1290    25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  97 LHIGRGLYYNSFmlKE----TWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVD 172
Cdd:COG1290   105 LHMFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 173 NPTLSRFFSLH-FILPFIIAAMVIIHLMFLHQTGSNNPLG----MNKNSEKIPFHPFYSIKDSITMIMLMMTLMLISLTY 247
Cdd:COG1290   183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 248 PyiMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIP--NKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQIM 325
Cdd:COG1290   263 P--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 2130626268 326 FWNMTATVVLLTWVGKQPveEPYITVGQALTMLYFSYFMMNTWVMKAWDK 375
Cdd:COG1290   341 GVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIEK 388
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 10-207 4.55e-94

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 279.64  E-value: 4.55e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  10 PLVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGAS 89
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  90 MFFICLYLHIGRGLYYNSFM--LKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWG 167
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2130626268 168 GFAVDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSN 207
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
CYTB MTH00046
cytochrome b; Validated
 11-358 2.10e-86

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 265.69  E-value: 2.10e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  11 LVKIINNSLIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASM 90
Cdd:MTH00046    1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  91 FFICLYLHIGRGLYYNSFMLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFA 170
Cdd:MTH00046   81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 171 VDNPTLSRFFSLHFILPFIIAAMVIIHLMFLHQTGSNNPLGMNKN-SEKIPFHPFYSIKDSITMIMLMMTLMLISLTYPY 249
Cdd:MTH00046  161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 250 IMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIaLVMSIAITMIMPFYNKSKFqgnqFYPINQIMFWNM 329
Cdd:MTH00046  241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSV----YSVWRQVNFWLI 315

                         330       340
                  ....*....|....*....|....*....
gi 2130626268 330 TATVVLLTWVGKQPVEEPYITVGQALTML 358
Cdd:MTH00046  316 VSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
19-205 7.18e-85

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 255.77  E-value: 7.18e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  19 LIDLPTPMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFFICLYLH 98
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  99 IGRGLYYNSF--MLKETWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTL 176
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 2130626268 177 SRFFSLHFILPFIIAAMVIIHLMFLHQTG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 208-353 3.44e-45

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 152.41  E-value: 3.44e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 208 NPLGMNKNSEKIPFHPFYSIKDSITMIMLMMTLMLISLTYPYIMGDPDNFIPANPLVTPPHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626268 288 KLGGVIALVMSIAITMIMPFYNKSKFQgNQFYPINQIMFWNMTATVVLLTWVGKQPVEEPYITVGQ 353
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQ 145
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
259-359 4.89e-42

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 142.62  E-value: 4.89e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFYNKSKFQGNQFYPINQIMFWNMTATVVLLTW 338
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 2130626268 339 VGKQPVEEPYITVGQALTMLY 359
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
89-229 8.01e-40

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 138.91  E-value: 8.01e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  89 SMFFICLYLHIGRGLYYNSFMLKE--TWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIW 166
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2130626268 167 GGFAVDNPTLSRFFSLHF-ILPFIIAAMVIIHLMFLHQTGSNNPLGMNKNSEKIPFHPFYSIKD 229
Cdd:pfam13631  81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKM 144
PRK03735 PRK03735
cytochrome b6; Provisional
 34-210 1.07e-38

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 137.92  E-value: 1.07e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  34 LGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFFICLYLHIGRGLYYNSFMLKE- 112
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 113 -TWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTLSRFFSLH-FILPFII 190
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170       180
                  ....*....|....*....|
gi 2130626268 191 AAMVIIHLMFLHQTGSNNPL 210
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGPL 223
petB CHL00070
cytochrome b6
 25-210 1.58e-33

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 124.06  E-value: 1.58e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268  25 PMNISMWWNLGSLLGMCLMIQIITGLFLAMHYTADIEMAFNSVIHICRDVNNGWLIRTLHMNGASMFFICLYLHIGRGLY 104
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 105 YNSFMLKE--TWIIGVIILFMTMATAFIGYVLPWGQMSFWGATVITNLLSAIPYMGNQIVQWIWGGFAVDNPTLSRFFSL 182
Cdd:CHL00070  107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                         170       180
                  ....*....|....*....|....*....
gi 2130626268 183 H-FILPFIIAAMVIIHLMFLHQTGSNNPL 210
Cdd:CHL00070  187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
petD CHL00058
cytochrome b6/f complex subunit IV
 248-336 6.58e-11

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 60.40  E-value: 6.58e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 248 PYIMGDPdnfipANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFY-NKSKFQGNQFYPINQIMF 326
Cdd:CHL00058   59 PSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFRRPVATTVF 133

                          90
                  ....*....|
gi 2130626268 327 WNMTATVVLL 336
Cdd:CHL00058  134 LIGTAVALWL 143
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 259-340 2.64e-10

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 58.66  E-value: 2.64e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 259 PANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFY-NKSKFQGNQFYPINQIMFwnMTATVVLLt 337
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIeNVNKFQNPFRRPVATTVF--LFGTVVAL- 141


                  ...
gi 2130626268 338 WVG 340
Cdd:TIGR01156 142 WLG 144
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 248-346 3.56e-10

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 58.27  E-value: 3.56e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626268 248 PYIMGDPdnfipANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIAITMIMPFY-NKSKFQGNQFYPINQIMF 326
Cdd:COG5679    60 PAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIeNVNKFQNPFRRPVATAVF 134

                          90       100
                  ....*....|....*....|
gi 2130626268 327 WNMTATVVLLTWVGKQPVEE 346
Cdd:COG5679   135 LFGTLVTLWLGIGAALPIDK 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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