NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2130626269|gb|UEK75826|]
View 

NADH dehydrogenase subunit 1 (mitochondrion) [Coptotettix longtanensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-309 1.46e-129

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 371.02  E-value: 1.46e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   6 FFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  86 LFLALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 166 SYNMGFFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00193  161 SFNLLDFMNYqkYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626269 244 VLFFLGGDYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILF 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-309 1.46e-129

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 371.02  E-value: 1.46e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   6 FFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  86 LFLALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 166 SYNMGFFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00193  161 SFNLLDFMNYqkYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626269 244 VLFFLGGDYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILF 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-296 1.94e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 292.80  E-value: 1.94e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   1 MYFIDFFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  81 SPVFSLFLALLIWLVFPYFTFFC--SLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIML 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 159 SLFILSGSYNMGFFIYY---NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAM 235
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAqagGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2130626269 236 IIFMSFLIVLFFLGGdYNS-------------LFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISL 296
Cdd:COG1005   243 MFLVSALATTLFLGG-WLGpfpilplgglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
NADHdh pfam00146
NADH dehydrogenase;
14-301 9.30e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 290.14  E-value: 9.30e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  14 ILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFLALLIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  94 LVFPYFT--FFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGSYNMGF 171
Cdd:pfam00146  83 AVIPFGPglVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 172 FIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIVLFFLG 249
Cdd:pfam00146 163 IVEAqaGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2130626269 250 G------DYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFF 301
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
16-296 6.58e-51

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 171.43  E-value: 6.58e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  16 IILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFLALLIWLV 95
Cdd:NF040610   19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  96 FPYFTFF----------CSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSG 165
Cdd:NF040610   99 IPFGAVIingveyplvvTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 166 SYNMGFFIYYN--VWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLI 243
Cdd:NF040610  179 SLNIVEIVEAQspIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLV 258

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2130626269 244 VLFFLGGdYN----------------SLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISL 296
Cdd:NF040610  259 VLLFLGG-WNlpgfvtdipvlgiilpTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-309 1.46e-129

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 371.02  E-value: 1.46e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   6 FFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  86 LFLALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 166 SYNMGFFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00193  161 SFNLLDFMNYqkYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626269 244 VLFFLGGDYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILF 309
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 8-307 6.24e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 331.61  E-value: 6.24e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   8 MFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLF 87
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  88 LALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGSY 167
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 168 NMGFFIYYN--VWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIVL 245
Cdd:MTH00225  162 NLFDFSYNQkyFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2130626269 246 FFLGGDYN--SLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKI 307
Cdd:MTH00225  242 LFFGGFFVtiDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-305 1.81e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 327.98  E-value: 1.81e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   7 FMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  87 FLALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGS 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 167 YNMGFFIYYN--VWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIV 244
Cdd:MTH00143  161 FSFIEISESQfsVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626269 245 LFFLGGD-----YNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGL 305
Cdd:MTH00143  241 VLFFGGSsvlflLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 8-309 1.60e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 315.80  E-value: 1.60e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   8 MFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLF 87
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  88 LALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGSY 167
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 168 NMGFFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIVL 245
Cdd:MTH00104  161 TLSTLITTqeHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2130626269 246 FFLGGDYN-------SLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILF 309
Cdd:MTH00104  241 LFLGAFHNpympelyTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMT 311
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 10-309 3.32e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 314.54  E-value: 3.32e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  10 FINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFLA 89
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  90 LLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGSYNM 169
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 170 GFFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIVLFF 247
Cdd:MTH00218  165 EGFNLTqeTIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2130626269 248 LGGDYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILF 309
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 6-310 5.07e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 309.63  E-value: 5.07e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   6 FFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFS 85
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  86 LFLALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSG 165
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 166 SYNMGFFIY--YNVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00071  164 GFSLMNFNTtqEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2130626269 244 VLFFLGGDYN-------SLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILFI 310
Cdd:MTH00071  244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTL 317
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 11-296 5.42e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 309.52  E-value: 5.42e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  11 INFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFLAL 90
Cdd:MTH00111    9 INPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLAL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  91 LIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGSYNMG 170
Cdd:MTH00111   89 TIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQ 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 171 FFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFL-IVLFF 247
Cdd:MTH00111  169 TLATTqePLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLtTILFL 248

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2130626269 248 LGGDYN------SLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISL 296
Cdd:MTH00111  249 NPSTLNlppelfTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 6-309 6.06e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 304.22  E-value: 6.06e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   6 FFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFS 85
Cdd:MTH00134    5 LITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  86 LFLALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSG 165
Cdd:MTH00134   85 LTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 166 SYNMGFF--IYYNVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00134  165 GFTLQTFntAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2130626269 244 VLFFLGGDYNSLF-------FFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILF 309
Cdd:MTH00134  245 AILFLGASHIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 7-309 3.72e-101

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 299.58  E-value: 3.72e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   7 FMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSL 86
Cdd:MTH00040    4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  87 FLALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGS 166
Cdd:MTH00040   84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 167 YNMGFFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIV 244
Cdd:MTH00040  164 FSLSSISNSqnGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2130626269 245 LFFLGGD--------YNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILF 309
Cdd:MTH00040  244 ILFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-296 1.94e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 292.80  E-value: 1.94e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   1 MYFIDFFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  81 SPVFSLFLALLIWLVFPYFTFFC--SLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIML 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 159 SLFILSGSYNMGFFIYY---NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAM 235
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAqagGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2130626269 236 IIFMSFLIVLFFLGGdYNS-------------LFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISL 296
Cdd:COG1005   243 MFLVSALATTLFLGG-WLGpfpilplgglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
NADHdh pfam00146
NADH dehydrogenase;
14-301 9.30e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 290.14  E-value: 9.30e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  14 ILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFLALLIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  94 LVFPYFT--FFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGSYNMGF 171
Cdd:pfam00146  83 AVIPFGPglVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 172 FIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIVLFFLG 249
Cdd:pfam00146 163 IVEAqaGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2130626269 250 G------DYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFF 301
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 11-309 1.67e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 289.72  E-value: 1.67e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  11 INFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFLAL 90
Cdd:MTH00195    6 IHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALAL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  91 LIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGSYNMG 170
Cdd:MTH00195   86 ILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFT 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 171 FFIYYN--VWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIVLFFL 248
Cdd:MTH00195  166 IMVISQgfSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFL 245

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2130626269 249 GGDYNSLFFFiKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILF 309
Cdd:MTH00195  246 GGGGTIIVAL-KSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 9-310 5.83e-92

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 275.89  E-value: 5.83e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   9 FFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFL 88
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  89 ALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGSYN 168
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 169 MGFFIYYNV-WFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIVLFF 247
Cdd:MTH00010  165 FSKIIMSQYsWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2130626269 248 LG----GDYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILFI 310
Cdd:MTH00010  245 TSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 8-309 3.69e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 274.30  E-value: 3.69e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   8 MFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLF 87
Cdd:MTH00054    3 IIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLT 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  88 LALLIWLVFPYFT--FFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSG 165
Cdd:MTH00054   83 LAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVG 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 166 SYNMGFFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLI 243
Cdd:MTH00054  163 SLNLTEIVLAqkNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFG 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626269 244 VLFFLGG----------DYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKILF 309
Cdd:MTH00054  243 VILFLGGwlvisgptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGF 318
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-296 2.63e-90

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 272.07  E-value: 2.63e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   6 FFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFS 85
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  86 LFLALLIWLVFPYFTFFCSLDL--GFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFIL 163
Cdd:PRK06076   89 FIPAFLAWAVIPFGPELVIADLnvGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 164 SGSYNMGFFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSF 241
Cdd:PRK06076  169 AGSLNLSDIVEAqfLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2130626269 242 LIVLFFLGG----------DYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISL 296
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-305 1.81e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 265.06  E-value: 1.81e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   3 FIDFFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSP 82
Cdd:MTH00216    2 MVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAP 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  83 VFSLFLALLIWLVFPY--FTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSL 160
Cdd:MTH00216   82 VLSFTLALIVWGVIPYerGVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 161 FILSGSYNMGFFIYYN---VWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMII 237
Cdd:MTH00216  162 LLCVGSLSITEIVLAQnngIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHII 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626269 238 FMSFLIVLFFLGG--------DYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGL 305
Cdd:MTH00216  242 LMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-309 4.15e-72

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 226.44  E-value: 4.15e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   1 MYFIDFFMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFF 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  81 SPVFSLFLALLIWLV--FPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIML 158
Cdd:MTH00029   81 APIISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 159 SLFILSGSYNMGFFIYY--NVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMI 236
Cdd:MTH00029  161 SVILCVGSLNISEIVISqrSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 237 IFMSFLIVLFFLGG-----------------------DYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLP 293
Cdd:MTH00029  241 ILMSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320

                         330
                  ....*....|....*.
gi 2130626269 294 ISLNYLFFFFGLKILF 309
Cdd:MTH00029  321 LSLGLVILTAGILIGF 336
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 12-307 3.92e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 193.58  E-value: 3.92e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  12 NFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFLALL 91
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  92 IWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGSYnmgf 171
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSF---- 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 172 fiYYNVWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIVLFFLGgd 251
Cdd:MTH00090  157 --SFVSSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2130626269 252 ynslFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFFGLKI 307
Cdd:MTH00090  233 ----FSFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
16-296 6.58e-51

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 171.43  E-value: 6.58e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  16 IILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFLALLIWLV 95
Cdd:NF040610   19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  96 FPYFTFF----------CSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSG 165
Cdd:NF040610   99 IPFGAVIingveyplvvTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 166 SYNMGFFIYYN--VWFIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLI 243
Cdd:NF040610  179 SLNIVEIVEAQspIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLV 258

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2130626269 244 VLFFLGGdYN----------------SLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISL 296
Cdd:NF040610  259 VLLFLGG-WNlpgfvtdipvlgiilpTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 7-303 1.62e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 166.25  E-value: 1.62e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   7 FMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSL 86
Cdd:MTH00058    1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  87 FLALLIWLVFPYFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGS 166
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 167 YNMgFFIYYNVWFIIFMFPL-FLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMIIFMSFLIVL 245
Cdd:MTH00058  161 YSL-VDFYYSGWLSVLLFPLiYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSV 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2130626269 246 FFLGGDYNSLFFFIKLVFimfsFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFF 303
Cdd:MTH00058  240 LFFGGGFVSIMLLFHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 10-310 1.62e-39

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 142.01  E-value: 1.62e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  10 FINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPNKVGYLGVLQPFGDAIKLFSSEQILPYISNYFFYFFSPVFSLFLA 89
Cdd:CHL00032   30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  90 LLIWLVFP--YFTFFCSLDLGFLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILSGS- 166
Cdd:CHL00032  110 LLSYLVIPfgYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSl 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 167 ---------YNMGFFiYYNVWfiifMFPL-FLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEYAMI 236
Cdd:CHL00032  190 stvdiveaqSKYGFW-GWNLW----RQPIgFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNL 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 237 IFMSFLIVLFFLGGDYNSL--FFFIKL--------VFIM-----------FSFLWV----RGTLPRYRYDKLMYLSWKGF 291
Cdd:CHL00032  265 LVSSLFVTVLYLGGWNLSIpyIFIPELfeinktggVFGTtigifitlaktYLFLFIsittRWTLPRLRMDQLLNLGWKFL 344

                         330
                  ....*....|....*....
gi 2130626269 292 LPISLNYLFFFFGLKILFI 310
Cdd:CHL00032  345 LPISLGNLLLTTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-303 5.03e-31

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 117.98  E-value: 5.03e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269   7 FMFFINFILIILMVLLSVAFLTLLERKVLGYIQLRKGPnkvgylGVLQPFGDAIKLFSSEQILPYISNYFFYFFsPVFSL 86
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRAA-PYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269  87 FLALLIWLVFPYFTFFCSLDLG--FLFLLCVMSLGVYGLMMAGWSSNSNYALLGSLRSVAQTISYEVSLSIIMLSLFILS 164
Cdd:COG0650    74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 165 GSYNMGFFIYYNVW-----FIIFMFPLFLCFYCSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFALIFLAEY-AMIIF 238
Cdd:COG0650   154 GSTSLSDIVAYQAAhgpllLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAAlKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2130626269 239 MSFLIVLFFLGG-----DYNSLFFFIKLVFIMFSFLWVRGTLPRYRYDKLMYLSWKGFLPISLNYLFFFF 303
Cdd:COG0650   234 LSLFVNLFLPWGialtlLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH