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Conserved domains on  [gi|2222472152|gb|UOT91731|]
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cytochrome b (mitochondrion) [Colobus angolensis]

Protein Classification

cytochrome b( domain architecture ID 999999)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain; contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis

CATH:  1.20.810.10
Gene Ontology:  GO:0009055|GO:0046872|GO:0022904|GO:0005743|GO:0020037
PubMed:  2509716|8329437
SCOP:  4002208

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB super family cl31797
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


The actual alignment was detected with superfamily member MTH00100:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 677.13  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00100    1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  81 YLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00100   81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 161 VQWVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILM 240
Cdd:MTH00100  161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 241 MLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPL 320
Cdd:MTH00100  241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2222472152 321 SQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPLASLTENKLLKW 379
Cdd:MTH00100  321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 677.13  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00100    1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  81 YLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00100   81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 161 VQWVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILM 240
Cdd:MTH00100  161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 241 MLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPL 320
Cdd:MTH00100  241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2222472152 321 SQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPLASLTENKLLKW 379
Cdd:MTH00100  321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-373 1.11e-121

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 357.18  E-value: 1.11e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPTRKSNPIMKMIN---------HTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITR 71
Cdd:COG1290     1 MSTTKKASGLADWLDerlplaslvREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  72 DVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSF-----LLletWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVI 146
Cdd:COG1290    81 DVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYkkpreLN---WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVI 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 147 TNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTIH-FTLPFIIVAFTTLHLLFLHETGSNNPCGI----TSNSDKIPFH 221
Cdd:COG1290   158 TGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFH 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 222 PYYTTKDILGLTFLLLILMMLVLFLPDLlsDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVP--NKLGGVLALLLSIL 299
Cdd:COG1290   238 PYYTVKDGFGFFVFLGVFALLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAIL 315

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2222472152 300 ILMAMPMLHKSKQQSMAFRPLSQLMLWLLITTLITLTWIGSQPVsqPFIMIGQTASMMYFTTILILMPLASLTE 373
Cdd:COG1290   316 VLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 9-206 7.12e-96

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 284.26  E-value: 7.12e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   9 PIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGAS 88
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  89 MFFICLFLHVGRGLYYGSF--LLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWG 166
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2222472152 167 GYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSN 206
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
18-204 1.04e-86

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 260.39  E-value: 1.04e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  18 FIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLH 97
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  98 VGRGLYYGSF--LLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTL 175
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 2222472152 176 TRFFTIHFTLPFIIVAFTTLHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 258-318 9.91e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 50.95  E-value: 9.91e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2222472152 258 PANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFR 318
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFR 125
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 677.13  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00100    1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  81 YLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00100   81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 161 VQWVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILM 240
Cdd:MTH00100  161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 241 MLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPL 320
Cdd:MTH00100  241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2222472152 321 SQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPLASLTENKLLKW 379
Cdd:MTH00100  321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
CYTB MTH00119
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 628.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTP-TRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWII 79
Cdd:MTH00119    1 MAPnLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  80 RYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTN 159
Cdd:MTH00119   81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 160 LVQWVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLIL 239
Cdd:MTH00119  161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 240 MMLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRP 319
Cdd:MTH00119  241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 320 LSQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPLASLTENKLLKW 379
Cdd:MTH00119  321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
CYTB MTH00131
cytochrome b; Provisional
 1-380 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 592.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00131    1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  81 YLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00131   81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 161 VQWVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILM 240
Cdd:MTH00131  161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 241 MLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPL 320
Cdd:MTH00131  241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 321 SQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPLASLTENKLLKWT 380
Cdd:MTH00131  321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEWA 380
CYTB MTH00074
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 585.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00074    2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  81 YLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00074   82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 161 VQWVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILM 240
Cdd:MTH00074  162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 241 MLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPL 320
Cdd:MTH00074  242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPL 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2222472152 321 SQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPLASLTENKLLKW 379
Cdd:MTH00074  322 TQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
CYTB MTH00191
cytochrome b; Provisional
 5-368 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 567.62  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   5 RKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHA 84
Cdd:MTH00191    2 RKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  85 NGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWV 164
Cdd:MTH00191   82 NGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 165 WGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILMMLVL 244
Cdd:MTH00191  162 WGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 245 FLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPLSQLM 324
Cdd:MTH00191  242 FSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVV 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 2222472152 325 LWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPL 368
Cdd:MTH00191  322 FWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 11-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 549.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  11 MKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGASMF 90
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  91 FICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSI 170
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 171 DNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILMMLVLFLPDLL 250
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 251 SDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPLSQLMLWLLIT 330
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 2222472152 331 TLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILM 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
CYTB MTH00034
cytochrome b; Validated
 3-377 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 540.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   3 PTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYL 82
Cdd:MTH00034    3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  83 HANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQ 162
Cdd:MTH00034   83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 163 WVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILMML 242
Cdd:MTH00034  163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 243 VLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPLSQ 322
Cdd:MTH00034  243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2222472152 323 LMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPLASLTENKLL 377
Cdd:MTH00034  323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
CYTB MTH00145
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 532.94  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00145    2 LSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  81 YLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00145   82 SLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKML 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 161 VQWVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILM 240
Cdd:MTH00145  162 VEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLV 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 241 MLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPL 320
Cdd:MTH00145  242 FLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPL 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2222472152 321 SQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFtTILILMPLASLTENKLL 377
Cdd:MTH00145  322 NQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYF-LFFLILPLVQKLWDNIL 377
CYTB MTH00016
cytochrome b; Validated
 1-378 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 513.46  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00016    2 FSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  81 YLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00016   82 NLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKML 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 161 VQWVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILM 240
Cdd:MTH00016  162 VQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 241 MLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPL 320
Cdd:MTH00016  242 SVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPL 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2222472152 321 SQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFtTILILMPLASLTENKLLK 378
Cdd:MTH00016  322 NQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYF-FYFMINPLLMKLWDKLLK 378
CYTB MTH00053
cytochrome b; Provisional
 1-378 3.40e-169

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 477.28  E-value: 3.40e-169
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPT-RKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWII 79
Cdd:MTH00053    1 MTKTiRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  80 RYLHANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTN 159
Cdd:MTH00053   81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 160 LVQWVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLIL 239
Cdd:MTH00053  161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 240 MMLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRP 319
Cdd:MTH00053  241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2222472152 320 LSQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPLASLTENKLLK 378
Cdd:MTH00053  321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
CYTB MTH00022
cytochrome b; Validated
 3-378 7.52e-167

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 471.49  E-value: 7.52e-167
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   3 PTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYL 82
Cdd:MTH00022    2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  83 HANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQ 162
Cdd:MTH00022   82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 163 WVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILMML 242
Cdd:MTH00022  162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 243 VLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPLSQ 322
Cdd:MTH00022  242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2222472152 323 LMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFTTILILMPLASLTENKLLK 378
Cdd:MTH00022  322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
CYTB MTH00224
cytochrome b; Provisional
 3-378 3.74e-161

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 457.08  E-value: 3.74e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   3 PTRKSNPIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYL 82
Cdd:MTH00224    4 PFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  83 HANGASMFFICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQ 162
Cdd:MTH00224   84 HANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVE 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 163 WVWGGYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILMML 242
Cdd:MTH00224  164 WIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLM 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 243 VLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPLSQ 322
Cdd:MTH00224  244 VLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQ 323

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2222472152 323 LMLWLLITTLITLTWIGSQPVSQPFIMIGQTASMMYFtTILILMPLASLTENKLLK 378
Cdd:MTH00224  324 LLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYF-SYFIISPAISKLWDDLLN 378
CYTB MTH00033
cytochrome b; Provisional
 19-374 9.26e-126

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 367.34  E-value: 9.26e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  19 IDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHV 98
Cdd:MTH00033   16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHI 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  99 GRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRF 178
Cdd:MTH00033   96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 179 FTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDILGLTFLLLILMMLVLF--LPDLLSDPDNY 256
Cdd:MTH00033  176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEprIETLLQDPENF 255

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 257 TPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPLSQLMLWLLITTLITLT 336
Cdd:MTH00033  256 IQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILT 335

                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 2222472152 337 WIGSQPV-SQPFIMIGQTASMMYFTTILILMPLASLTEN 374
Cdd:MTH00033  336 WIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-373 1.11e-121

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 357.18  E-value: 1.11e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   1 MTPTRKSNPIMKMIN---------HTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITR 71
Cdd:COG1290     1 MSTTKKASGLADWLDerlplaslvREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  72 DVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSF-----LLletWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVI 146
Cdd:COG1290    81 DVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYkkpreLN---WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVI 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 147 TNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTIH-FTLPFIIVAFTTLHLLFLHETGSNNPCGI----TSNSDKIPFH 221
Cdd:COG1290   158 TGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFH 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 222 PYYTTKDILGLTFLLLILMMLVLFLPDLlsDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVP--NKLGGVLALLLSIL 299
Cdd:COG1290   238 PYYTVKDGFGFFVFLGVFALLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAIL 315

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2222472152 300 ILMAMPMLHKSKQQSMAFRPLSQLMLWLLITTLITLTWIGSQPVsqPFIMIGQTASMMYFTTILILMPLASLTE 373
Cdd:COG1290   316 VLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
 12-366 1.60e-105

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 314.57  E-value: 1.60e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  12 KMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGASMFF 91
Cdd:MTH00086    1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  92 ICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSID 171
Cdd:MTH00086   81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 172 NPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDIlGLTFLLLILMMLVLFLPDLLS 251
Cdd:MTH00086  161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDA-YNIIFWLVFIIFSLFYPFNLG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 252 DPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSkqqSMAFRPLSQLMLWLLITT 331
Cdd:MTH00086  240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVV 316

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 2222472152 332 LITLTWIGSQPVSQPFIMIGQTASMMYFTTILILM 366
Cdd:MTH00086  317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 9-206 7.12e-96

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 284.26  E-value: 7.12e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152   9 PIMKMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGAS 88
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  89 MFFICLFLHVGRGLYYGSF--LLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWG 166
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2222472152 167 GYSIDNPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSN 206
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
18-204 1.04e-86

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 260.39  E-value: 1.04e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  18 FIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLH 97
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  98 VGRGLYYGSF--LLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTL 175
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 2222472152 176 TRFFTIHFTLPFIIVAFTTLHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
CYTB MTH00046
cytochrome b; Validated
 12-290 1.16e-82

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 256.06  E-value: 1.16e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  12 KMINHTFIDLPTPSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGASMFF 91
Cdd:MTH00046    3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  92 ICLFLHVGRGLYYGSFLLLETWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSID 171
Cdd:MTH00046   83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 172 NPTLTRFFTIHFTLPFIIVAFTTLHLLFLHETGSNNPCGITSN-SDKIPFHPYYTTKDILGLTFLLLILMMLVLFLPDLL 250
Cdd:MTH00046  163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 2222472152 251 SDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPNKLGG 290
Cdd:MTH00046  243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG 282
PRK03735 PRK03735
cytochrome b6; Provisional
 33-208 3.42e-41

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 144.47  E-value: 3.42e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  33 FGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLLE- 111
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 112 -TWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTIH-FTLPFII 189
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203

                         170
                  ....*....|....*....
gi 2222472152 190 VAFTTLHLLFLHETGSNNP 208
Cdd:PRK03735  204 AVLMLAHFLMIRKQGISGP 222
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
88-229 1.34e-40

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 141.22  E-value: 1.34e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  88 SMFFICLFLHVGRGLYYGSFLLLE--TWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVW 165
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2222472152 166 GGYSIDNPTLTRFFTIHFT-LPFIIVAFTTLHLLFLHETGSNNPCGITSNSDKIPFHPYYTTKDI 229
Cdd:pfam13631  81 GGPFPGTATIPRFYALHILlLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKML 145
petB CHL00070
cytochrome b6
 24-208 2.07e-36

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 131.77  E-value: 2.07e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152  24 PSNISMWWNFGSLLATCLLLQIITGLFLAMHYSPDISSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLY 103
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 104 YGSFLLLE--TWNIGILLLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTI 181
Cdd:CHL00070  107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                         170       180
                  ....*....|....*....|....*...
gi 2222472152 182 H-FTLPFIIVAFTTLHLLFLHETGSNNP 208
Cdd:CHL00070  187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 207-354 6.72e-35

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 125.45  E-value: 6.72e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 207 NPCGITSNSDKIPFHPYYTTKDILGLTFLLLILMMLVLFLPDLLSDPDNYTPANPLSTPPHIKPEWYFLFAYAILRSVPN 286
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2222472152 287 KLGGVLALLLSILILMAMPMLHKSKQQSMaFRPLSQLMLWLLITTLITLTWIGSQPVSQPFIMIGQTA 354
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
258-358 3.45e-29

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 108.72  E-value: 3.45e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2222472152 258 PANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFRPLSQLMLWLLITTLITLTW 337
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 2222472152 338 IGSQPVSQPFIMIGQTASMMY 358
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 258-321 5.07e-08

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 52.10  E-value: 5.07e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2222472152 258 PANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHK-SKQQSMAFRPLS 321
Cdd:COG5679    66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENvNKFQNPFRRPVA 130
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 258-318 9.91e-08

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 50.95  E-value: 9.91e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2222472152 258 PANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILMAMPMLHKSKQQSMAFR 318
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFR 125
petD CHL00058
cytochrome b6/f complex subunit IV
 258-291 2.11e-07

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 50.00  E-value: 2.11e-07
                          10        20        30
                  ....*....|....*....|....*....|....
gi 2222472152 258 PANPLSTPPHIKPEWYFLFAYAILRSVPNKLGGV 291
Cdd:CHL00058   65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGV 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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