|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-571 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 584.80 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 2 LNNFYLYSLLLFTSSLISLFWGLIFLFFDYSVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEG 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 82 DLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 162 FGSWNYIYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLS 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 242 NMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLS 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 322 DYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSL 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 402 IGPNSFNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFPIPSGVYLPLYLKLLTYIVVILGFYFGHLISTLS---F 478
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSlsyN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 479 NFFFKYFFLSDFIGYMWFLPLISTKLMSYGILMGSKLYYHLMDYGWLEYYGAQGLYNFFFYFVKQYLHLFDYNFKTYIML 558
Cdd:MTH00165 481 LKSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 2227918626 559 FSLFFVLFYLYML 571
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
7-570 |
1.78e-166 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 485.12 E-value: 1.78e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 7 LYSLLLFTSSLISLFWGLIFLFFDYSVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFID 86
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 87 RFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLNFGSWN 166
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 167 YIYYYDFFFnsydCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNM-NY 245
Cdd:MTH00151 166 ILSMWDFKL----SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGfSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 246 LLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSDYQD 325
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 326 IRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGPN 405
Cdd:MTH00151 322 IRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 406 SFNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFPIPSGVYLPLYLKLLTYIVVILGFYFGhLISTLSFNFFFKYF 485
Cdd:MTH00151 402 KSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLS-FGFWDSGFSSSKMV 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 486 FLSDFIGYMWFLPLISTKLMSYGILMGSKLYYHLMDYGWLEYYGAQGLYNFFFYFVKQYLHLFDYNFKTYIMLFSLFFVL 565
Cdd:MTH00151 481 KLSFFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLF 560
|
....*
gi 2227918626 566 FYLYM 570
Cdd:MTH00151 561 LVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
2-570 |
3.43e-155 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 456.41 E-value: 3.43e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 2 LNNFYLYSLLLFTSSLISLfwglIFLFFDYSVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEG 81
Cdd:MTH00209 3 KMQMFSLMLLFLFSFLMFV----IFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 82 DLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLN 161
Cdd:MTH00209 79 EKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 162 FGSWNyIYYYDFFFNSYdcWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-ML 240
Cdd:MTH00209 159 HGNWN-IFYLNFNSNLG--SVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLfSS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 241 SNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKL 320
Cdd:MTH00209 236 PFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSH 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 321 SDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYS 400
Cdd:MTH00209 316 GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFS 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 401 LIGPNSFNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFPIPSGVYLPLYLKLLTYIVVILGFYFGHLISTLSFNF 480
Cdd:MTH00209 396 LWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFL 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 481 FFKYFFLSdFIGYMWFLPLISTKLMSYGILMGSKLYYHLMDYGWLEYYGAQGLYNFFFYFVKQYLHLFDYNFKTYIMLFS 560
Cdd:MTH00209 476 IKGYKVNY-FLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMM 554
|
570
....*....|
gi 2227918626 561 LFFVLFYLYM 570
Cdd:MTH00209 555 LILLGVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
1.37e-152 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 449.99 E-value: 1.37e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 1 MLNNFYLYSLLLFTSSLISLFWGLIFLFFDYSVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYME 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 81 GDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 161 NFGSWNYIYYYDFFFNSYdcwlMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-M 239
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLsS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 240 LSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHK 319
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 320 LSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYY 399
Cdd:MTH00207 319 HHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 400 SLIGPNSFNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFPIPSGVYLPLYLKLLTYIVVILGFYFGHLISTL--- 476
Cdd:MTH00207 399 VLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPnit 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 477 SFNFFFKYFFLSDFIGYMWFLPLISTKLMSYGILMGSKLYYHLMDYGWLEYYGAQGLYNFFFYFVKQYLHLFDYNFKTYI 556
Cdd:MTH00207 479 KTPLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYL 558
|
570
....*....|....
gi 2227918626 557 MLFSLFFVLFYLYM 570
Cdd:MTH00207 559 MMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
14-572 |
4.49e-107 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 333.46 E-value: 4.49e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 14 TSSLISLFWGLIFLFFDY-SVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILV 92
Cdd:MTH00211 37 LSFFISLIPLLIFLDQGLeTILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 93 FLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYT-NRVGDVFILLSIAWML-NFGSWNYIYY 170
Cdd:MTH00211 117 LLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIyNRIGDIGLLLSMVWLLlNLNSWEISQL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 171 YDFFFNSydcWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNM-NYLLLF 249
Cdd:MTH00211 197 FILNLDL---TLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLiLGAVLL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 250 FGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSDYQDIRFM 329
Cdd:MTH00211 274 LGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKM 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 330 GSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGPNSFNV 409
Cdd:MTH00211 354 GGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLS 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 410 LCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFPI-PSGVYLPLYLKLLTYIVVILGFYFGHLISTLSfnFFFKYFFLS 488
Cdd:MTH00211 434 LSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLELVNLT--HKQLKTSTL 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 489 DFIGYMWFLPLISTKLMSYGIL-MGSKLYYHLMDYGWLEYYGAQGLYNFFFYFVKQYLHLFDYNFKTYIMLFSLFFVLFY 567
Cdd:MTH00211 512 SFSNMLGYYPPIIHRLLPKLSLkWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLIL 591
|
....*
gi 2227918626 568 LYMLF 572
Cdd:MTH00211 592 LLFLL 596
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
11-535 |
8.05e-91 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 291.30 E-value: 8.05e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 11 LLFTSSLISLfwgLIFLFFD-YSVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFV 89
Cdd:MTH00004 42 LAFLISLIPL---TLFLNSGtESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFF 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 90 ILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYT-NRVGDVFILLSIAWM-LNFGSWNY 167
Cdd:MTH00004 119 KYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIyNRIGDIGLILSMAWLaMTLNTWEI 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 168 iyyYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSN-MNYL 246
Cdd:MTH00004 199 ---QQLFSPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQtALTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 247 LLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSDYQDI 326
Cdd:MTH00004 276 CLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDI 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 327 RFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGPNS 406
Cdd:MTH00004 356 RKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPR 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 407 FNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFPI-PSGVYLPLYLKLLTYIVVILGFYFG----HLISTLSFNFF 481
Cdd:MTH00004 436 TPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLAlelsNMTTTLTPPKQ 515
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 2227918626 482 FKYFFLSDFIGYMWFLP--LISTKLMSygilMGSKLYYHLMDYGWLEYYGAQGLYN 535
Cdd:MTH00004 516 NTLHNFSNQLAFFNPLThrLLPMTLLK----SSQKIATHLIDLSWLEKMGPKGLAN 567
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
13-568 |
2.09e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 277.17 E-value: 2.09e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 13 FTSSLISLFwglifLFFDY---SVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFV 89
Cdd:MTH00066 42 FFISLIPLM-----IFINQgleSITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFF 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 90 ILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYT-NRVGDVFILLSIAW-MLNFGSWNY 167
Cdd:MTH00066 117 KYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLyNRVGDIGLILSMAWlAMNTNSWEL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 168 IYYYDFFFNSYdcwLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNMNYLL 247
Cdd:MTH00066 197 QQIFLLNDNST---LPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTI 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 248 -LFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSDYQDI 326
Cdd:MTH00066 274 cLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDI 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 327 RFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGPNS 406
Cdd:MTH00066 354 RKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPR 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 407 FNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFPI-PSGVYLPLYLKLLTYIVVILGFYFGHLISTLSFNFFFKYF 485
Cdd:MTH00066 434 SLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTK 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 486 FLSDFIGYMWFLPLISTKLMSYGILMGSKLYYHLMDYGWLEYYGAQGLYNFFFYFVKQYLHLFDYNFKTYIMLF--SLFF 563
Cdd:MTH00066 514 MHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFliTLLL 593
|
....*
gi 2227918626 564 VLFYL 568
Cdd:MTH00066 594 MLILL 598
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
2-572 |
5.21e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 276.85 E-value: 5.21e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 2 LNNFYLYSLLLFTSSLISLFWGLIFLFFD----YSVVIEWeiYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNS 77
Cdd:MTH00208 52 YNNSNFSISLLKTLAFLSLINLLIWILLGcpniNISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHY 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 78 YMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAY-TNRVGDVFILLSI 156
Cdd:MTH00208 130 YMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAViYNRIGDIGIILFL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 157 AW-MLNFGSWNYIYYydFFFNSYDCWLMCLM---IMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLI 232
Cdd:MTH00208 210 SLsLINFNSWNLNEI--LSLNNSNSFLINILlfgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLI 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 233 RFSPMLMLSN-MNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFL 311
Cdd:MTH00208 288 RTSPLISNSPwFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFL 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 312 CAGCYIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAM 391
Cdd:MTH00208 368 CSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAV 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 392 YSIRLFYYSLIGPNSFNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFPIPSgVYLPLYLKLLTYIVVILGFYFGH 471
Cdd:MTH00208 448 YSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPP-LTLPLILKSLPLIVTIIGAAFSF 526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 472 LISTLSFNFFFKYFFLSDFIGYMWFLPLISTKLMSYGILMGSKLYYHLMDYGWLEYYGAQGLYNFFFYFVKQYLHLFDYN 551
Cdd:MTH00208 527 SFLLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGY 606
|
570 580
....*....|....*....|.
gi 2227918626 552 FKTYIMLFSLFFVLFYLYMLF 572
Cdd:MTH00208 607 IKQYLLSSTLLFLLILTLSLI 627
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
9-473 |
3.10e-84 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 274.34 E-value: 3.10e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 9 SLLLFTSSLISLFWGLIFL---FFDYSVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFI 85
Cdd:COG1009 31 GWLAALAPLAAFVLSLLLFpavLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 86 DRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLV-IYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLN-FG 163
Cdd:COG1009 111 ARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIgFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAiAG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 164 SWNY---IYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLML 240
Cdd:COG1009 191 TLNFselLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFAL 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 241 SNM-NYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHK 319
Cdd:COG1009 271 SPVwLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 320 LSDyQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILE-FCSYNELNFLIYFMFFFSTGLTAMYSIRLFY 398
Cdd:COG1009 351 TGT-RDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFF 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 399 YSLIGPNSFNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWL---------IFPIPSGVYLPLYLKLLTYIVVILGFYF 469
Cdd:COG1009 430 LVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLlegllapaaVLGGELHLAHGLLLNALPLLLSLLGIAL 509
|
....
gi 2227918626 470 GHLI 473
Cdd:COG1009 510 GYLL 513
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
12-473 |
3.81e-78 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 258.37 E-value: 3.81e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 12 LFTSSLISL-FWGLIFLFFDYSVVIEWEIY--------SLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGD 82
Cdd:TIGR01974 31 IIGIGSVGLsAALSAFVFVDFFLNGEGEAFtqslfpwiSVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHD 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 83 LFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLV-IYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLN 161
Cdd:TIGR01974 111 EGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFW 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 162 -FGSWNYIYYYDFFFNSYDCWLM--CLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML 238
Cdd:TIGR01974 191 yFGTLNFQEVFALAPGAFFSALTliCLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLF 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 239 MLSN-MNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYI 317
Cdd:TIGR01974 271 ELSPtALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVI 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 318 HKLSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLF 397
Cdd:TIGR01974 351 HAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLI 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 398 YYSLIGPNSFNVLCMFNNIGNDMYYGMMLLLLFTVF------------GGSLMFWLIfPIPSGVYLPLYLKLLTYIVVIL 465
Cdd:TIGR01974 431 FMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFagffivplfeflKGVLPTSAE-PALEHHHVPALEIWSPTAVAIL 509
|
....*...
gi 2227918626 466 GFYFGHLI 473
Cdd:TIGR01974 510 GILLAYLL 517
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
13-536 |
9.26e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 257.09 E-value: 9.26e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 13 FTSSLISLfwgLIFLFFDYSVVI-EWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVIL 91
Cdd:MTH00108 44 FIISLIPT---MMFIHSGQEMIIsNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKY 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 92 VFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYT-NRVGDVFILLSIAW-MLNFGSWnyiy 169
Cdd:MTH00108 121 LLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILyNRIGDIGFILAMAWfLLNLNSW---- 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 170 yyDF---FFNSYDCWLMCLM-IMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSN-MN 244
Cdd:MTH00108 197 --DLqqiFMLNPNNSNLPLMgLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKtIQ 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 245 YLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSDYQ 324
Cdd:MTH00108 275 TLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 325 DIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGP 404
Cdd:MTH00108 355 DIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQ 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 405 NSFNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFP--IPSgVYLPLYLKLLTYIVVILGFYFG----HLISTLSF 478
Cdd:MTH00108 435 PRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIPQ-MTMPLYLKLTALAVTILGFILAlelnLLTNNLKF 513
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 2227918626 479 NFFFKYFFLSDFIGYmwfLPLISTKLMSY-GILMGSKLYYHLMDYGWLEYYGAQGLYNF 536
Cdd:MTH00108 514 KYPSNTFKFSNMLGY---FPTIMHRLPPYmNLTMSQKLASMLLDLIWLEKILPKTISLI 569
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
6-470 |
2.34e-74 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 248.53 E-value: 2.34e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 6 YLYSLLLFTSSLISLFWGLIFLFFDYSVVIE--WEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDL 83
Cdd:PRK06590 33 LVGTGLVGLSALLSLVVFFDFLLGGGRAFSQtlWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 84 FIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLV-IYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWML-N 161
Cdd:PRK06590 113 GYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 162 FGSWNYIY-----YYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSP 236
Cdd:PRK06590 193 FGSLNYDEvfaaaPQFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 237 MLMLS-NMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGC 315
Cdd:PRK06590 273 LFELSpEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGS 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 316 YIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFcSYNELNFLIYFMFFFSTGLTAMYSIR 395
Cdd:PRK06590 353 VIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEA-AFANGHINLFVAGLVGAFLTAFYSFR 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 396 LFYYSLIGPN---------SFNVlcmfnnigndMYYGMMLLLLFTVFGGSLM---FWLIFPIPSGV-------YLPLYLK 456
Cdd:PRK06590 432 LIFLVFHGKEkekihhpheSPAV----------MTLPLIVLAVLSVFAGALIvppFLGVLPLTTELahgeaehHLPVWVA 501
|
490
....*....|....
gi 2227918626 457 LLTYIVVILGFYFG 470
Cdd:PRK06590 502 LLPLVVALAGIALA 515
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
9-570 |
1.29e-72 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 243.45 E-value: 1.29e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 9 SLLLFTSSLISLFWGLIFLFFDYSVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRF 88
Cdd:MTH00020 34 SCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 89 VILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLV-IYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLN-FGSWN 166
Cdd:MTH00020 114 MSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLD 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 167 Y--IYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNMN 244
Cdd:MTH00020 194 FssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLA 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 245 YLLL-FFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSDY 323
Cdd:MTH00020 274 LIIVtIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDE 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 324 QDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIG 403
Cdd:MTH00020 354 QDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLS 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 404 -PNSFNVLCMFNNIGN-DMYYGMMLLLLFTVFGGSLMFWLIFPIPSGVY--LPLYLKLLTYIVVILG-----FYFGHLIS 474
Cdd:MTH00020 434 nTNLKKAVFFHLHEGDwNLLLPLGILALGSIFVGYLAKEMIWSFQITLPpiVPLSIKLLPVFLSLGGiglviILYFYSSK 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 475 TLSFNFFFKYFFLSDFIGYMWFLPLISTKLMSYGIL-MGSKLYYHLMDYGWLEYYGAQGLYNFFFYFVKQYLHLFDYNFK 553
Cdd:MTH00020 514 TFRVPFSFIGRNSYTFLGSAWQFNYILNYFLIKKIWkGGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVF 593
|
570
....*....|....*..
gi 2227918626 554 TYIMLFSLFFVLFYLYM 570
Cdd:MTH00020 594 NYALVILIGVAIFIWGL 610
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
13-410 |
2.82e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 229.33 E-value: 2.82e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 13 FTSSLISLFwglifLFFDY---SVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFV 89
Cdd:MTH00137 48 FFVSLLPLF-----LFLNQgaeTIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 90 ILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTA--YtNRVGDVFILLSIAWML-NFGSWN 166
Cdd:MTH00137 123 KYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAviY-NRVGDIGLILAMAWMAtNLNSWE 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 167 yIYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLMLSNMNYL 246
Cdd:MTH00137 202 -IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSP-LMENNQTAL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 247 --LLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSDYQ 324
Cdd:MTH00137 280 ttCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQ 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 325 DIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGP 404
Cdd:MTH00137 360 DIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGH 439
|
....*.
gi 2227918626 405 NSFNVL 410
Cdd:MTH00137 440 PRFNPL 445
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
12-566 |
3.54e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 215.64 E-value: 3.54e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 12 LFTSSLISLFWGLiflffdySVVIEWEIySLNSSVIV---------------MALILDWMSLIFMSFVLMISSLVMFYSN 76
Cdd:MTH00210 30 ILTSSCIVISAIV-------SCCIFYET-TLNGSATYiklwrwfdsellttyFGLQFDSLTSTMLIVITSVSALVHIYST 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 77 SYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTA-YTNRVGDVFILLS 155
Cdd:MTH00210 102 GYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAmLINRVGDIGLVLA 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 156 IAWMLN-FGSWNY--IY-YYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLL 231
Cdd:MTH00210 182 MIMILKeFGTLEFstISsLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLI 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 232 IRFSPMLMLSNMNYLLL-FFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLF 310
Cdd:MTH00210 262 IRSGPLFEGSPLALTIVtILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLF 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 311 LCAGCYIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTA 390
Cdd:MTH00210 342 LSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTA 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 391 MYSIRLFYYSLIG-PNSFNVLCMFNNIGN-DMYYGMMLLLLFTVFGGSLMFWLIFPIPSGVYLPLYLKLLTYIVVILGFY 468
Cdd:MTH00210 422 FYSIRLIYLTFITnTNSKKEVFIGVHESSwNITFPLLLLAFGSIFVGYLGKEVVLSNVIPPIVPNSIKMIPLLFSLLGAL 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 469 FGHLI-STLSFNFFFKYFFLSDFIGYMWFLPLISTKLMSYGI---------LMGSKLYYHLMDYGWLEYYGAQGLYNFFF 538
Cdd:MTH00210 502 LAFVIyNSMVFLIKISRRGVSIRLYHVIYTFLNSAWQFNYVInhfivkniwKFGHLITYRIIDRGLLEIIGPRGISKVLI 581
|
570 580
....*....|....*....|....*...
gi 2227918626 539 YFVKQYLHLFDYNFKTYIMLFSLFFVLF 566
Cdd:MTH00210 582 KLTQKISNLQSGMVFNYALIMIIFTTLF 609
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
11-469 |
3.38e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 200.14 E-value: 3.38e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 11 LLFTSSLISLFWGLIFLFFDYSVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVI 90
Cdd:MTH00095 1 MNILIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 91 LVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYTNRVGDVFILLsiawmlnFGSWNYIYY 170
Cdd:MTH00095 81 VLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFL-------FFSGFIFSS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 171 YDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNMNYLLLFF 250
Cdd:MTH00095 154 YYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLLI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 251 GCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSDYQDIRFMG 330
Cdd:MTH00095 234 GLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 331 SLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIgpnSFNVL 410
Cdd:MTH00095 314 NNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFL---SFSKV 390
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2227918626 411 CMFNNIGNDMYYGMMLLLLFTVFggsLMFWLIFPIPSGVYLPLYLKLLTYIVVILGFYF 469
Cdd:MTH00095 391 VNVYSSSVLMNFLSLMLVFFSVF---FLWWLNFNLLNLPSLFLYLDFYVPLFYLFMIML 446
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
19-398 |
6.97e-55 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 196.78 E-value: 6.97e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 19 SLFWGLIFLFFDYSVVIEWEiySLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLS 98
Cdd:PRK07376 57 ALLWSQIQGHEPYERLFEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSS 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 99 MMFLILSPNLISILLGWDGLGLISYCLV-IYYQNFSSSNAGLLTAYTNRVGDVFILLSIawmlnFGSWNYIYYYDFFF-- 175
Cdd:PRK07376 135 MLGLVISPNLVQIYVFWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGI-----LGLFWATGSFDFDGia 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 176 ---------NSYDCW---LMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPML-MLSN 242
Cdd:PRK07376 210 drlselvssGAVSGWlalLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFeQFPA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 243 MNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSD 322
Cdd:PRK07376 290 VMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEE 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 323 Y--------QDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEfcSYNELNFLIYFMFFFSTGLTAMYSI 394
Cdd:PRK07376 370 VvghdpvlaQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILG--AAFEANPALWFVGFLTAGMTAFYMF 447
|
....
gi 2227918626 395 RLFY 398
Cdd:PRK07376 448 RMYF 451
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
7-533 |
4.76e-50 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 183.24 E-value: 4.76e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 7 LYSLLLFTSSLISLFWGLIFLFFDysVVIEWEIYSLNSSVIVM---ALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDL 83
Cdd:MTH00032 31 LSTICMGSSTLIALFLAYEVLIND--AVVHIELYKWIESEIFIthiGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDP 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 84 FIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTA-YTNRVGDVFILLSIAWML-N 161
Cdd:MTH00032 109 HVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAiVVNRVGDVGVILGMVLIYkT 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 162 FGSWNYIYYYDFFFNS----------------YDCW-LMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLV 224
Cdd:MTH00032 189 IGSLDFLTFNGGSVGSgimdrgyygggayespLAPFaIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 225 TAGVYLLIRFSPMLMLSNMNYLLL-FFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSM-GYPLLSFFHLLIH 302
Cdd:MTH00032 269 TAGVFLMIRSFPLFEKAPLTLLIItIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 303 ALFKSLLFLCAGCYIHKLS-DYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFcSYNELNFLI--- 378
Cdd:MTH00032 349 AFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL-TYSGRNMGIpfg 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 379 ----------------------------------YFMFFFSTGLTAMYSIRLFYYS-LIGPNSFN---VLCMFNNIGNDM 420
Cdd:MTH00032 428 ssllkiqgdigikkddrgsiggpegypsrgsafaFWLGTVAALLTAFYSIRLVYITfIISPNSPKeslISSHINIVDKRV 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 421 YYGMMLLLLFTVFGGSLMFWLIFPIPSGVYLPLYLKLLTYIVVILGF----------YFGHLISTLSFNFFFKYFFLSDF 490
Cdd:MTH00032 508 LTVLSLLCFGAIFVGYLIQDILIGDIEHPIVPPLIKVMPTLMGLFGMglclwaqkgtREGELYWGFDPIGPSFLLSIYSF 587
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 2227918626 491 IGYMWFLPLISTKLMSYGIL-MGSKLYYHLMDYGWLEYYGAQGL 533
Cdd:MTH00032 588 LGGAWQGDHLINKLVAIPLFsFGHWGIYKTLDRGWLELFGPQGI 631
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-367 |
5.42e-43 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 165.22 E-value: 5.42e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 43 NSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLIS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 123 YCLVIyyQNFSSSNAG-----LLTAytnrVGDVFILLSIAWMLN-FGSWNY--IYYYDFFF-NSYDCWLMCLMIMFAAMT 193
Cdd:PRK12650 147 FFLIA--RSGSGGEAGsirtlILTF----FGGLTLLAAVAIAATqTGTTSLsgILHSDVWAeKPGLTTVVAVLIAVAAFT 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 194 SSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPmLMLSNM--NYLLLFFGCLTMMMSGFTANYEFDLKSV 271
Cdd:PRK12650 221 KSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSP-VFHDVAvwNWLLIIVGMITALMGAVFAVQKTDLKKL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 272 IALSTLSQLGLMLSILSMGYPL---LSFFHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSMPYVSACFNISNL 348
Cdd:PRK12650 300 TAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAAL 378
|
330
....*....|....*....
gi 2227918626 349 SLCGFPFLSGFYSSDLILE 367
Cdd:PRK12650 379 SMAAVPPLFGFVSKEGMLT 397
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-385 |
8.06e-42 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 152.08 E-value: 8.06e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 105 SPNLISILLGWDGLGLISYCLVIYY-QNFSSSNAGLLTAYTNRVGDVFILLSIAWMLNFGSWNYIY----YYDFFFNSYD 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 180 CWLMCLMIMFAAMTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLMLSN--MNYLLLFFGCLTMM 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpfIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 257 MSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPL---LSFFHLLIHALFKSLLFLCAGCYIHKLSDYQDIRFMGSLT 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2227918626 334 YSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFS 385
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
47-401 |
1.61e-39 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 154.14 E-value: 1.61e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 47 IVMALILDWMSLIFMSFVLMISSLVMFYSNSYM-EGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCL 125
Cdd:PRK12646 70 INLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 126 VIYYQNFSSSNAGLLTAYTNRV-GDVFILLSIAWMLNFGSWNYIY----YYDFFFNSYDCWLMCLMIMFAAMTSSAQIPF 200
Cdd:PRK12646 150 ISYWYNNGDSQFGAIQSFMITVfGGLALLVGFIMLYIMTGTNNITeilgQADHIKNHGLFIPMIFMFLLGAFTKSAQFPF 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 201 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNMN-YLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQ 279
Cdd:PRK12646 230 HIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYiYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 280 LGLMLSILSMG--------------YPLLSF---FHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSMPYVSAC 342
Cdd:PRK12646 310 LGMIMAMVGIGggyaqhqqdaiasiYVFVLFaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLV 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 343 FNISNLSLCGFPFLSGFYSSDLILE-FCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSL 401
Cdd:PRK12646 389 MTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFIGVIASIFTFTYAL 448
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-367 |
2.06e-39 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 153.54 E-value: 2.06e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 53 LDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNF 132
Cdd:PRK12647 62 LDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHER 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 133 SSSNAGLLTAYTNRVGDVFILL-------------SIAWMLNFGswNYIYYYDFFFnsydcwLMCLMIMFAAMTSSAQIP 199
Cdd:PRK12647 142 EAARRAALQALLVTGGGGLALLaglillgnvtgtySLSELLASG--DVIREHPLYL------AILLLVLGGAFTKSAQFP 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 200 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNM-NYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLS 278
Cdd:PRK12647 214 FHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLwQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVS 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 279 QLGLMLSILSMGYPLL---SFFHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPF 355
Cdd:PRK12647 294 ALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
330
....*....|..
gi 2227918626 356 LSGFYSSDLILE 367
Cdd:PRK12647 373 LFGFLAKELIYE 384
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
50-399 |
3.17e-38 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 146.06 E-value: 3.17e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 50 ALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYY 129
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 130 QNFSSSNAGLLTAYTNRVGDVFILLSIAWM-LNFGSWNYIYYYDFFFNSYDCWLM--CLMIMFAAMTSSAQIPFSSWLPA 206
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAELDPGLLLaaFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 207 AMA-APTPVSALVhSSTLVTAGVYLLIRFS----PMLMLSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLG 281
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLtllfGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 282 LMLSILSMGYPLL---SFFHLLIHALFKSLLFLCAGCYIHKLsDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSG 358
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2227918626 359 FYSSDLILEfCSYNELNFLIYFMFFFSTGLTAMYSIRLFYY 399
Cdd:COG0651 389 FVSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
17-473 |
3.60e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 144.64 E-value: 3.60e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 17 LISLFWGLIFLFFDYSVVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMI---SSLVMFYSNSYMEGDLFIDRFVILVF 93
Cdd:MTH00063 4 LVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLlicFYYSLLYTFHYFGGSYASFLLNKLIV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 94 LFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMlnfgswNYIYYYDF 173
Cdd:MTH00063 84 LFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLS------CWGGSGSF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 174 FFnsydcwlmCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNMNYLLLFFGCL 253
Cdd:MTH00063 158 LC--------CLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLLLL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 254 TMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLSDYQDIRFMGSLT 333
Cdd:MTH00063 230 TIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYSSI 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 334 YSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLF--YYSLIGPNSFNVLC 411
Cdd:MTH00063 310 LYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCliLFGVKSSLSSGVRF 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2227918626 412 MFNNIGNdmyygMMLLLLFtvfggsLMFWLIFPIPSGVYLPLYLKLLTYIVVILGFYFGHLI 473
Cdd:MTH00063 390 LFFNSGL-----MVFLWLF------INYYVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLF 440
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
51-403 |
2.00e-35 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 141.91 E-value: 2.00e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 51 LILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQ 130
Cdd:TIGR00940 71 LYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWH 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 131 NFSSSNAGLLTAYTNRVGDVFILLSIAWMLNFGSWNY-----IYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLP 205
Cdd:TIGR00940 151 HRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFsidavIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 206 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSN-MNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLML 284
Cdd:TIGR00940 231 DAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEaWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIM 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 285 SILSMGYPLLSF----------------FHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSMPYVSACFNISNL 348
Cdd:TIGR00940 311 VLLGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASA 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2227918626 349 SLCGFPFLSGFYSSDLILE---------FCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIG 403
Cdd:TIGR00940 390 AMAGVPPFNGFLSKEMFFAeaitahlvnPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
70-397 |
3.00e-35 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 141.18 E-value: 3.00e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 70 LVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLV-IYYQNFSSSNAGLLTAYTNRVG 148
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 149 DVFILLSIA---WMLnfGSWNYIYYYDFFF--------NSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSAL 217
Cdd:CHL00025 186 DFGLLLGILgfyWIT--GSFEFRDLFEIFNnliynnevNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISAL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 218 VHSSTLVTAGVYLLIRFSPML-MLSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSF 296
Cdd:CHL00025 264 IHAATMVAAGIFLVARLLPLFiVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAAL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 297 FHLLIHALFKSLLFLCAGCYIH---KLSDY-----QDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILef 368
Cdd:CHL00025 344 FHLITHAYSKALLFLGSGSVIHsmePIVGYspdksQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL-- 421
|
330 340 350
....*....|....*....|....*....|..
gi 2227918626 369 csyNEL---NFLIYFMFFFSTGLTAMYSIRLF 397
Cdd:CHL00025 422 ---NDSwlySPIFAIIAWSTAGLTAFYMFRIY 450
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
50-361 |
2.43e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 138.78 E-value: 2.43e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 50 ALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYY 129
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 130 QNFSSSNAGLLTAYTNRVGDVFILLsiAWMLNFGswnYIyyydffFNSYDC----------------WLMCLMIMFAAMT 193
Cdd:PRK12648 151 HHRADARRGARMALTVTGAGGLALL--AGVLLLG---HI------VGSYDLdvvlaagdlirahplyPPALVLILLGAFT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 194 SSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNM-NYLLLFFGCLTMMMSGFTANYEFDLKSVI 272
Cdd:PRK12648 220 KSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEwFWIVGGAGLITLLLGAYFALFQHDLKGLL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 273 ALSTLSQLGLMLSILSMGYPL---LSFFHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSMPYVSACFNISNLS 349
Cdd:PRK12648 300 AYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAA 378
|
330
....*....|..
gi 2227918626 350 LCGFPFLSGFYS 361
Cdd:PRK12648 379 MAGVPLLNGFLS 390
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
33-367 |
2.26e-33 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 135.82 E-value: 2.26e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 33 VVIEWeIYSLNssvIVMALILDWMSLIFMSFVLMISSLVMFYSNSYM---EGDLfiDRFVILVFLFVLSMMFLILSPNLI 109
Cdd:PRK12644 56 EVVPW-IPSLG---LDLAFRLDALAALMSLLVLGVGALVLLYCARYFdddEPRL--GRFAAELVAFAGAMFGLVTSDNLL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 110 SILLGWDGLGLISYCLVIYYQNFSSS-----NAGLLTAY---TNRVGdvFILLSIAwmlnFGSWNYIYYYDFFFNSYDCW 181
Cdd:PRK12644 130 LLYVFWELTTVLSFLLIGHYAERAASrraalQALLVTTAgglAMLVG--IIILGQA----AGTYRLSELLADPPTGPAVS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 182 LMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLM-LSNMNYLLLFFGCLTMMMSGF 260
Cdd:PRK12644 204 VAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFAdVPVWRPTVLVLGLATMLLGGW 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 261 TANYEFDLKSVIALSTLSQLGLMLSILSMGYP---LLSFFHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSMP 337
Cdd:PRK12644 284 RALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaaLAGLAMLLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQP 362
|
330 340 350
....*....|....*....|....*....|
gi 2227918626 338 YVSACFNISNLSLCGFPFLSGFYSSDLILE 367
Cdd:PRK12644 363 VLAVVAALAAASMAGLPPLLGFVAKEAALE 392
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
51-404 |
1.56e-31 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 130.05 E-value: 1.56e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 51 LILDWMSLIFMSFVLMISSLVMFYSNSYM-EGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYY 129
Cdd:PRK12645 74 LYVDGLSLLFALLITGIGSLVVLYSIYYLsKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYW 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 130 QNFSSSNAGLLTAYTNRVGDV------FILLSIAwmlnFGSWN---YIYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPF 200
Cdd:PRK12645 154 YEREASRYGAQKSMLITVFGGlsmlggFILLYIM----TGSFSireMIANADEIQNSPLFIPAMILILLGAFTKSAQFPF 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 201 SSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNM-NYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQ 279
Cdd:PRK12645 230 YIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVwFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 280 LGLMLSILSMGYPLLSF----------------FHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSMPYVSACF 343
Cdd:PRK12645 310 LGLIMSLLGIGAASLHYqgddskiyaaaitaaiFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIA 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 344 NISNLSLCGFPFLSGFYSSDLILE---------FCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGP 404
Cdd:PRK12645 389 LIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-396 |
3.29e-30 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 126.10 E-value: 3.29e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 54 DWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFS 133
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRP 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 134 SSNAGLLTAYTNRVGDVFILLS-------------IAWMLNFGSW-NYIYYYDFFFnsydcwLMCLMIMFAAMTSSAQIP 199
Cdd:PRK12649 159 ESVYGATKSLLITAGGGLFMFAgflllhvitgtydIATILQDSELiENIKGHPLFL------ITLILIFIGAAAKSAQGP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 200 FSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNMNYLLLF-FGCLTMMMSGFTANYEFDLKSVIALSTLS 278
Cdd:PRK12649 233 FYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSgTGMITMVLAGFLAFRQTDIKAILAYSTIS 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 279 QLGLMLSIL---SMGYPLLSF----FHLLIHALFKSLLFLCAGCYIHKLSDyQDIRFMGSLTYSMPYVSACFNISNLSLC 351
Cdd:PRK12649 313 QLAYLMTMYgytTYHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAALAMA 391
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2227918626 352 GFPFLSGFYSSDLILEfcSYNELNFLIYFMFFF--------STGLTAMYSIRL 396
Cdd:PRK12649 392 GIPPLNGFLSKEMFYE--TSVEMGALIGGPFTIiipavavlGGVFTFAYSIKL 442
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
45-366 |
4.00e-29 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 120.46 E-value: 4.00e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 45 SVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYME-------GDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDG 117
Cdd:PRK06525 65 DVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEI 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 118 LGLISYCLVIYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLNFGSWNYIYYYDFFFNSYDCWLMcLMIMFAAMTSSAQ 197
Cdd:PRK06525 145 TGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVF-LGILFAAWGKSAQ 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 198 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFspmlMLSNMN------YLLLFFGCLTMMMSGFTANYEFDLKSV 271
Cdd:PRK06525 224 LPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA----IQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 272 IALSTLSQLGLM---LSILSMGYPL---LSFFHLLIHALFKSLLFLCAGCYIHKLSDyQDIRFMGSLTYSMPYVSACFNI 345
Cdd:PRK06525 300 LAYSTITQLGYMffgLSLAILGSRLaleGSIAYIFNHAFAKSLFFLVAGALSYSCGT-RLLPRLRGVLKKLPLVGVGFCV 378
|
330 340
....*....|....*....|.
gi 2227918626 346 SNLSLCGFPFLSGFYSSDLIL 366
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIF 399
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
10-393 |
4.40e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 106.74 E-value: 4.40e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 10 LLLFTSSLISLFWGLIFLFFDYSVVIE-WEIYSlnssVIVMALILDWMSLIFMSFVLMISSLVMFYSNSY---MEGDLFI 85
Cdd:PRK08667 35 LWLVIAIALLLFAGSLQLFTGNPLDIPlWGIAP----GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 86 DRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIY-YQNFSSSNAGLLTAYTNRVGDVFILLSIAWM-LNFG 163
Cdd:PRK08667 111 NLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNdYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLfIQTG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 164 SWNYIYYYdffFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLMLSN 242
Cdd:PRK08667 191 SFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPE 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 243 M--NYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGL-----------------MLSILSMGYPLlsfFHLLIHA 303
Cdd:PRK08667 267 LwwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIilmgiglyvifgvygldTLALLALGGAL---FHSLNHA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 304 LFKSLLFLCAGCYIHKLSDyQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILE--FCSYNELNFLIYFM 381
Cdd:PRK08667 344 LFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYEsfFQSFSVADPLIKIL 422
|
410
....*....|..
gi 2227918626 382 FFFSTGLTAMYS 393
Cdd:PRK08667 423 LFSVLAIFALTS 434
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-570 |
4.95e-24 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 99.16 E-value: 4.95e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 392 YSIRLFYYSLIGPNSFNVLCMFNNIGNDMYYGMMLLLLFTVFGGSLMFWLIFPIPSGVYLPLYLKLLTYIVVILGFYFGH 471
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 472 LIS--TLSFNFFFKYFFLSDFIGYMWFLPLISTKLMSYGILMGSKLYYHLMDYGWLEYYGAQGLYNFFFYFVKQYLHLFD 549
Cdd:pfam06455 81 ELSnlSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
170 180
....*....|....*....|.
gi 2227918626 550 YNFKTYIMLFSLFFVLFYLYM 570
Cdd:pfam06455 161 GLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-404 |
6.84e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 104.96 E-value: 6.84e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 186 MIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS------PMLMLSNMNYLLLFFGCLTMMMSG 259
Cdd:PRK08375 207 FVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfggDFRFALGLGWLLAVLALLSMLVGS 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 260 FTANYEFDLKSVIALSTLSQLGLML---SILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSM 336
Cdd:PRK08375 287 LAALGQDDVKRVLAYSTVSQMGYILlglALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRM 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2227918626 337 PYVSACFNISNLSLCGFPFLSGFYSSDLILeFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGP 404
Cdd:PRK08375 366 PLTAAAFAVASLSLIGVPPTSGFVSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGP 432
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-314 |
3.19e-23 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 103.24 E-value: 3.19e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 56 MSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFViLVFLFVLSMMF-LILSPNLISILLGWDGLGLISYCLVIYYQNfss 134
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYV-RALAGVLAAVHlLVLSDHLLVLIAAWAAISLALHRLLCFYPD--- 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 135 SNAGLLTAY----TNRVGDVFILLSIA-WMLNFGSWNY---IYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPA 206
Cdd:PRK08168 146 RPFARLAAHkkfiADRLAELLLLAAAAlAYLEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQ 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 207 AMAAPTPVSALVHSStLVTAGVYLLIRFSPMLMLSNM-NYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLS 285
Cdd:PRK08168 226 VMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPaRWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLL 304
|
250 260
....*....|....*....|....*....
gi 2227918626 286 ILSMGYPLLSFFHLLIHALFKSLLFLCAG 314
Cdd:PRK08168 305 ECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-435 |
1.11e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 98.63 E-value: 1.11e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 53 LDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQN- 131
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDt 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 132 FSSSNAGLLTAYTNRVGDVFILLSIAWML-NFGSWNYIYY-YDFFFNSYDCWLMCLMIMFAAMT-SSAQIPFSSWLPAAM 208
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLaVKMSENPTVVAKIALALFIAGLAmKSGAVPVHMWLPDAY 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 209 -AAPTPVSALVHSSTLvtAGVYLLIR-----FSPMLMLSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGL 282
Cdd:PRK08376 248 pAAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGY 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 283 ML-----SILSMGYPLLS----------FFHLLIHALFKSLLFLCAGCYIHKLSDyQDIRFMGSLTYSMPYVSACFNISN 347
Cdd:PRK08376 326 MLlglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAFLIGA 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 348 LSLCGFPFLSGFYSSDLILEfcSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGPNSFNVLcMFNNIGNDMYYGMMLL 427
Cdd:PRK08376 405 AAIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVM-NVKEPPKPMLVPMLIL 481
|
....*...
gi 2227918626 428 LLFTVFGG 435
Cdd:PRK08376 482 AIAIIGMG 489
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
61-361 |
7.48e-19 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 90.35 E-value: 7.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 61 MSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLL 140
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 141 TAY-TNRVGDVFILLSIAWMLNF-GSWNYIYYYDFF----FNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPV 214
Cdd:PRK07390 175 DAFlTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAatanLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 215 SALvHSSTLVTAGVYLLIRFSPMLMLSNM-NYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPL 293
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLALSPVaLTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2227918626 294 LSFFHLLIHALFKSLLFLCAGCYIHKLSDyQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYS 361
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-397 |
7.51e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 89.49 E-value: 7.51e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 1 MLNNFYLYSLLLFTSSLISLfwglIFLFFDYSVVIEWEIYSLNSSVIvmALILDWMSLIFMSFVLMISSLVMFYSNSYME 80
Cdd:PRK06589 35 FIRNFLLITISIFFFGNILL----IDLLFLKGIRAQFELMDFGNYSI--GLHLEPLGLIFLLLIGFLWICALLYTPKYLA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 81 GDlFIDRFVILVFLFVLSM---MFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGL--LTAYTNRVGDVFILLS 155
Cdd:PRK06589 109 IN-NIDSSSRFLFFFNLTIligVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYkyLKILMISALLLFLPAV 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 156 IAWMLNFGSWNYIYYYDFFFNSYdcwLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-- 233
Cdd:PRK06589 188 ILIYTKTGNLDFVSGGLFSKNQS---IILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKil 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 234 -----FSPMLMLSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPL---LSFFHLLIHALF 305
Cdd:PRK06589 265 lyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFA 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 306 KSLLFLCAGCyIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFS 385
Cdd:PRK06589 345 KICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVV 423
|
410
....*....|..
gi 2227918626 386 TGLTAMYSIRLF 397
Cdd:PRK06589 424 IASSILSALYLL 435
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-366 |
9.53e-19 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 89.95 E-value: 9.53e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 94 LFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQ-NFSSSNAGLLTAYTNRVGDVFILLSIAWMlnfgsWNYIYYYD 172
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHrEAEIRRAGFLYLLMAHAGALAILLAFGLL-----ARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 173 F----------FFNSydcwLMCLMIMFAAMTSSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLM-- 239
Cdd:PRK06521 196 FaamraahlspFWAS----LVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLga 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 240 -LSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSIL-------SMGYPLLS-------FFHLLIHAL 304
Cdd:PRK06521 271 pGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLglamvfiAYGMPLLAalaltaaLYHLLNHAL 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2227918626 305 FKSLLFLCAGCYIHKLSDyQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLIL 366
Cdd:PRK06521 351 FKSLLFLGAGAVLHATGT-RDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-404 |
3.17e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 87.72 E-value: 3.17e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 51 LILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQ 130
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 131 NFSSS-NAGLLTAYTNRVGDVFILLSIAWMLN-FGSWN--------YIYYYDFFFNSYDCWLMCLMIMFAAMTS-----S 195
Cdd:PRK12667 158 DRGDAvEAAIKYALIGAVGTTLYFLALAFLYAtFGTLNmadlsakiRGLSFPLTGGLAGNPPLALGVALALALWaftikA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 196 AQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLMLSNMNY---------LLLFFGCLTMMMSGFTANYE 265
Cdd:PRK12667 238 AIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSLidfraalspILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 266 FDLKSVIALSTLSQLGLMLSILSMGYPLL---SFFHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSMPYVSAC 342
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFA 395
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2227918626 343 FNISNLSLCGFPFLSGFYSSDLIleFCSYNELNFLIY-FMFFFSTGLTAMYSIRLFYYSLIGP 404
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLL--FNALLESGFYLPaLVLLIASAISLVGYFRAWYSLFFGK 456
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
198-367 |
1.67e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 85.39 E-value: 1.67e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 198 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSpmLMLSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTL 277
Cdd:PRK07234 201 FVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA--LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTI 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 278 SQLGLMLSilsmgYPLLSFFHLLIHALFKSLLFLCAGCyIHKLSDYQDIRFMGSLTYSMPYVSACFNISnlslcGFPFLS 357
Cdd:PRK07234 279 SQLGFILA-----APLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFSIA-----GFPLLA 347
|
170
....*....|
gi 2227918626 358 GFYSSDLILE 367
Cdd:PRK07234 348 GFVSKVLTLK 357
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
4-314 |
8.06e-17 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 83.55 E-value: 8.06e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 4 NFYLYSLLLFTSSLISLFWGLIFLFFD---YSVVIEWEIYSLNSSVIVMALI------------LDWMSLIFMSFVLMIS 68
Cdd:PRK08601 6 SSQTLLTLFFIALIIALLSGLLFLNPRmplRYVRIHIGILALPSLVALLGLIgangdvvvgpwhLDTLAWLMAFFVLTLG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 69 SLVMFYSNSYMEGDL-FIDRFVILVF-LFVLSMMFLilSPNLISILLGWdGLGLISYCLVIYYQNFS--SSNAGLLTAYT 144
Cdd:PRK08601 86 FIIQRFSVRYLLGDRsYRKYFALFTFtTGFASLAWL--SGDLRLMALCW-GATLLGLTLLIGLNKGWkvAREAAKISGML 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 145 NRVGDVFILLSIAWM-LNFGSWN-YIYYYDFFFNSYDCWL---MCLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVH 219
Cdd:PRK08601 163 FLISWLALALAIVWLfIATGEWQlTSVLSNENLAQLGTWEktgINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMH 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 220 SStLVTAGVYLLIRFSPMLMLSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSFFHL 299
Cdd:PRK08601 243 AG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHL 321
|
330
....*....|....*
gi 2227918626 300 LIHALFKSLLFLCAG 314
Cdd:PRK08601 322 ILHGLFKATLFLQSG 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
17-398 |
3.61e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 81.58 E-value: 3.61e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 17 LISLFWGLIFLFFDYS--VVIEWEIYSLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSY-MEGDLFIDRFVILVF 93
Cdd:PRK08668 29 VIGNALPLLFLIKLYFtlKVGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEkTKNDAYFNMFALMSL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 94 LFVLSMMFlilSPNLISILLGWDGLGLISYCLVIYYQNFSSSnAGLLTAYTNRVGDVFILLSIAWMLN-FGSWNYIYYYD 172
Cdd:PRK08668 109 AGVLGVFL---ANDLLTLYIFWEIMTFSSFMMVPMGKKESRK-ASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFADISQ 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 173 FFFN--SYD-CWLMCLMIMFAAMTSSAQIPFSSWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSPMLMLSNM----- 243
Cdd:PRK08668 185 GLINdtSTGfALIVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLYVLPGTKLfsefg 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 244 --------NYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLL---SFFHLLIHALFKSLLFLC 312
Cdd:PRK08668 264 tyrgvplfNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLI 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 313 AGCYIHKLSDYQdIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELnFLIYFMFFFSTGLTAMY 392
Cdd:PRK08668 344 FAAVIYRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM-PITAFMAFFGSIGSFLY 421
|
....*.
gi 2227918626 393 SIRLFY 398
Cdd:PRK08668 422 VFRPLA 427
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
38-396 |
8.56e-14 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 74.03 E-value: 8.56e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 38 EIYSLNSSVIVMA----------LILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLfIDRFVILVFLFVLSMMFLILSPN 107
Cdd:PRK08377 51 EVYTTGKPIIIMAggwkppvginLYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEP-IDKYAMLFLLLMLGATGMIATGD 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 108 LISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLN-FGSWNYIYYYDFF--FNSYDCWLMC 184
Cdd:PRK08377 130 IFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGaTGTLNMAHIAQLAgtIDPTVAQVGL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 185 LMIMFAAMTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR----FSPMLMLSNMNYLLLFFGCLTMMMSG 259
Cdd:PRK08377 210 ALLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARilylMQNANGWSSVLKLVIIMATLTVFFAE 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 260 FTANYEFDLKSVIALSTLSQLGLMLSILSMGYPL---LSFFHLLIHALFKSLLFLCAGCYIHKLSDYQDIRFMGsLTYSM 336
Cdd:PRK08377 289 LSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEG-LGKRM 367
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 337 PYVSACFNISNLSLCGFPFLSGFYSSDLILeFCSYNELNFLIYFMFFFSTGLTAMYSIRL 396
Cdd:PRK08377 368 PLTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
185-406 |
5.16e-13 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 71.46 E-value: 5.16e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 185 LMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMlmlsnmNYLLLFFGCLTMMMSGFTANY 264
Cdd:PRK12668 187 WLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPG------TELLIYIGAAMAVYGVFFALL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 265 EFDLKSVIALSTLSQLGLMLSILSMGYPLL---SFFHLLIHALFKSLLFLCAGCYIH-----KLSDyqdirfMGSLTYSM 336
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYrtgteKLTE------LGGLYRSM 334
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 337 PYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGPNS 406
Cdd:PRK12668 335 PLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYFAFFGGDS 404
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-366 |
2.13e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 69.57 E-value: 2.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 199 PFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpMLMLSNM-----NYLLLFFGCLTMMMSGFTANYEFDLKSVI 272
Cdd:PRK06458 232 PMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYY-ILIDAAIgsdfpGRLLLIFGLLSVLVAAFFLLRQRDIKRLF 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 273 ALSTLSQLGLMLSILSMGYPLLSF---FHLLIHALFKSLLFlCAGCYIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLS 349
Cdd:PRK06458 310 AYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALA 388
|
170
....*....|....*..
gi 2227918626 350 LCGFPFLSGFYSSDLIL 366
Cdd:PRK06458 389 IAGMPPFGVFISEFLIL 405
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-434 |
1.46e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 66.90 E-value: 1.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 185 LMIMFAamTSSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSPMLMLSNMN---YLLLFFGCLTMMMSGF 260
Cdd:PRK07691 215 FLFVFA--TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSfthYLILILALLTIIFGVI 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 261 TANYEFDLKSVIALSTLSQLGLMLSILSMGYPLL---SFFHLLIHALFKSLLFLCAGCYIhKLSDYQDIRFMGSLTYSMP 337
Cdd:PRK07691 292 GAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMI-KITGTTDLKKMGGLIKRYP 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 338 YVSACFNISNLSLCGFPFLSGFYSSDLILEfCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGPNSFNVLCMFNNIG 417
Cdd:PRK07691 371 VLGWMFFIAALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGYDLNNKVPVK 449
|
250
....*....|....*..
gi 2227918626 418 NDMYYGMMLLLLFTVFG 434
Cdd:PRK07691 450 KLLLPAVVLVAITILYG 466
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
199-404 |
1.10e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 63.95 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 199 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFSPMLM---LSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIAL 274
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 275 STLSQLGLMLSILSMGYPLL---SFFHLLIHALFKSLLFLCAGCYIHKLSDYqDIRFMGSLTYSMPYVSACFNISNLSLC 351
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRTHTR-DIADLGGLAKRMPVLAALFLLAALASL 384
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2227918626 352 GFPFLSGFYSSDLILeFCSYnELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGP 404
Cdd:COG1008 385 GLPGTSGFVGEFLVL-LGAF-QVNPWLAILAALGLILTAAYLLWMYQRVFFGP 435
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
6.58e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.77 E-value: 6.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 198 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpmLMLSNM----NYLLLFFGCLTMMMSGFTANYEFDLKSVI 272
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLS--LLGGNAplwwGVALLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 273 ALSTLSQLGLML-------SILSMGYPLL-------SFFHLLIHALFKSLLFLCAGCYIHKlSDYQDIRFMGSLTYSMPY 338
Cdd:PRK08042 274 AYHTLENIGIILlglgagvTGIALEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPV 352
|
170 180
....*....|....*....|.
gi 2227918626 339 VSACFNISNLSLCGFPFLSGF 359
Cdd:PRK08042 353 ISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
186-359 |
7.29e-10 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 61.50 E-value: 7.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 186 MIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLML---SNMNYLLLFFGCLTMMMSGFTA 262
Cdd:PRK12663 211 LLFLLAFGMKAALFPFMWLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPqerELLHPLLATMAAITMVIGALGA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 263 NYEFDLKSVIALSTLSQLGLMLSILSMGYPLL---SFFHLLIHALFKSLLFLCAGCYIhKLSDYQDIRFMGSLTYSMPYV 339
Cdd:PRK12663 291 LAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRKEPLF 369
|
170 180
....*....|....*....|
gi 2227918626 340 SACFNISNLSLCGFPFLSGF 359
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGF 389
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
11-361 |
9.46e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 60.90 E-value: 9.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 11 LLFTSSLISLFWGLIFLFFDYSVViewEIYSLNSSVIVmalilDWMSLIFMSFVLMISSLVMFYSNSYMEG-DLFIDRFV 89
Cdd:COG1007 34 LLAGLALLGLLLALALLLLALGGG---TGTAFGGMFVV-----DGFALFFKLLILLAALLVLLLSRDYLERrGLLRGEFY 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 90 ILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLV-IYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMlnFGSWNYI 168
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFRRDDRRSSEAALKYFLLGALSSGFLLYGISLL--YGATGSL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 169 YYYDFFFNSYDCWLMCLMIMFAAMTSSAQI-------PFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRF---SP 236
Cdd:COG1007 184 NLAGIAAALAAGGANSPLLLLGLVLVLAGLafklsavPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLlveAF 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 237 MLMLSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPL---LSFFHLLIHALFKSLLFLCA 313
Cdd:COG1007 262 PGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVI 341
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2227918626 314 GCYIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYS 361
Cdd:COG1007 342 LLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFG 389
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-359 |
1.12e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 60.75 E-value: 1.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 185 LMIMFAAMTSSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSPMLMLSN-MNYLLLFFGCLTMMMSGFTA 262
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGgLDTLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 263 NYEFDLKSVIALSTLSQLGLMLSILSMGYPL-LS--FFHLLIHALFKSLLFLCAGcYIHKLSDYQDIRFMGSLTYSMPYV 339
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAgLSgaIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLL 370
|
170 180
....*....|....*....|
gi 2227918626 340 SACFNISNLSLCGFPFLSGF 359
Cdd:PRK12665 371 AVLFFVPALNLGGIPPFSGF 390
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
185-314 |
6.66e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 58.23 E-value: 6.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 185 LMIMFAAMTSSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSPML----MLSNMNYLLLFFGCLTMMMSG 259
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqsgAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2227918626 260 FTANYEFDLKSVIALSTLSQLGLMLSILSMGYPLLSF---FHLLIHALFKSLLFLCAG 314
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG 346
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
148-397 |
6.27e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 55.33 E-value: 6.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 148 GDVFILLSIAWM--LNFGSWNYIYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWLPAAMA-APTPVSALVhSSTLV 224
Cdd:TIGR01972 168 GSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 225 TAGVYLLIRFSPMLMLSNMNY---LLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGL-MLSILSMGYPLLS--FFH 298
Cdd:TIGR01972 247 KMGTYGFLRFNLPLFPDASLYfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGIFSFNELGISgaVFQ 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 299 LLIHALFKSLLFLCAGcYIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILeFCSYnELNFLI 378
Cdd:TIGR01972 327 MISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL-LGSF-KVNPVV 403
|
250
....*....|....*....
gi 2227918626 379 YFMFFFSTGLTAMYSIRLF 397
Cdd:TIGR01972 404 AFLAALGIVLAAAYMLTLY 422
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
147-404 |
4.95e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 52.51 E-value: 4.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 147 VGDVFILLSIAWM-----LNFGSWNYIYYYDFFF-NSYDCWLM-CLMIMFAAMTSSaqIPFSSWLPAAMA-APTPVSALv 218
Cdd:PRK05846 172 LGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLpPGVQYWLFlAFFIAFAVKMPM--FPLHTWLPDAHVqAPTAGSVL- 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 219 HSSTLVTAGVYLLIRFS-PMLMLS--NMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLG-LMLSILSMGYPLL 294
Cdd:PRK05846 249 LAGILLKMGAYGLLRFSlPLFPDAshEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQLGI 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 295 S--FFHLLIHALFKSLLFLCAGCYIHKLSDyQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILeFCSYN 372
Cdd:PRK05846 329 QgaIFQMISHGLSSAALFLLVGVLYDRLHT-RDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL-LGSFQ 406
|
250 260 270
....*....|....*....|....*....|..
gi 2227918626 373 ElNFLIYFMFFFSTGLTAMYSIRLFYYSLIGP 404
Cdd:PRK05846 407 V-NPVIAFIATTGLILAAVYSLWLYQRVMFGP 437
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-361 |
1.83e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 50.50 E-value: 1.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 185 LMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR-----FSPMLMLSNM--NYLLLFFGCLTMMM 257
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvFKANFVFTTLpfNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 258 SGFTANYEFDLKSVIALSTLSQLG---LMLSILSMGYPLLSFFHLLIHALFKSLLFLCAGCYIHKLsDYQDIRFMGSLTY 334
Cdd:PRK12662 293 GSVLAILSKDIKRIFAYSSISHIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWK 371
|
170 180
....*....|....*....|....*..
gi 2227918626 335 SMPYVSACFNISNLSLCGFPFLSGFYS 361
Cdd:PRK12662 372 SMPKITLAFVLLSLSLIGMPPTSGFVA 398
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-450 |
8.84e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.57 E-value: 8.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 89 VILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLNFGSWNYI 168
Cdd:PRK12664 66 MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 169 YYydfffnsydcwlmcLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALVHSstLVTAGVYLLIrfspMLMLSNMNYLLL 248
Cdd:PRK12664 146 CK--------------LLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALV----LLLFFSGEEILL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 249 FFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMGYPL-----LSFFHLLIHALFKSLLFLCAGCYIHKlSDY 323
Cdd:PRK12664 206 FLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINR-TRK 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 324 QDIRFMGSLtYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFF--FSTGLTAMYSIRLFYYSL 401
Cdd:PRK12664 285 FNLNRVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFliCSLLLFASVGLKFFWYAF 363
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2227918626 402 IGPNSFNVLCMFNNIGNDMYYgMMLLLLFTVFGGSLMFWLIFPIPSGVY 450
Cdd:PRK12664 364 ISKSKSKPEAEKVYIGSKLSM-IILVLICVVLGMFNSYLLFYNLPSFVY 411
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-367 |
1.89e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.48 E-value: 1.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 60 FMSFVLMISSLVMFYSNSYMEGDLFIDRFVILVFLF-VLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPAFV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 139 LLTaytnrvgdvFILLSIAWMLNFGSWNYIYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPF--SSWLPAAMAAPTPVSA 216
Cdd:PRK06459 125 FMA---------FGELSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 217 LVHSSTLVTAGVYLLIRFSPMLMLSNMNYL---LLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSM---- 289
Cdd:PRK06459 196 AILSATMTLMGVYGILKMTILTQTIPIGYFgltILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvt 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 290 --------GYPLLS-FFHLLIHALFKSLLFLCAGcyihkLSDYQDIRFMGSLTYSMPYVSACfnISNLSLCGFPFLSGFY 360
Cdd:PRK06459 276 kqlitsieHFSLITvILYSFAHSVAKTGLFLSSG-----LQEKQSITYSKKIRNRWIELGLT--LLASSLSGLLPNIGGV 348
|
....*..
gi 2227918626 361 SSDLILE 367
Cdd:PRK06459 349 ASWLLLE 355
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
50-360 |
3.51e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 46.35 E-value: 3.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 50 ALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDlFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIY- 128
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDR-GRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALr 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 129 YQNFSSSNAGLLTAYTNRVGDVFILLSIAWMLNF-GSWNYIYYYDFFFNSYDCWLMcLMIMFAAMTSS-----AQIPFSS 202
Cdd:PRK05777 147 RDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAtGSLSFAGIAKALADGSGNSLL-LLFGLVFLLVGlafklSAVPFHM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 203 WLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSPMLMLSN---MNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLS 278
Cdd:PRK05777 226 WTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVAFGGLsedWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 279 QLGLMLSILSMGYPL---LSFFHLLIHALFKSLLFLCAGCYIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPF 355
Cdd:PRK05777 305 HAGYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPP 384
|
....*
gi 2227918626 356 LSGFY 360
Cdd:PRK05777 385 TAGFW 389
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
59-367 |
5.62e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.79 E-value: 5.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 59 IFMSFVLMISSLVMFysnSYMEGDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYYQNFSSSNAG 138
Cdd:PRK06277 76 IIIFVLSLIASLVLI---TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAA 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 139 LLTAYTNRVGDVFILLSIAWMLNF-GSWNYIYYYDFFFNSYDC---WLMCLMIMFAAMTSSAQIPFSSWLPAAMAAPTP- 213
Cdd:PRK06277 153 LKYMILGNVAGSILLLGIGFLLAStGTLNITDIHNALLVNPTSpviYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPf 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 214 VSALVHSS---TLVTAGVYLLIRFSPMLMLSNMNYLLLFFGCLTMMMSGFTANYEFDLKSVIALSTLSQLGLMLSILSMG 290
Cdd:PRK06277 233 GSALLQTFskfVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 291 YPL---LSFFHLLIHALFKSLLFLCAGCyIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLSLCGFPFLSGFYSSDLILE 367
Cdd:PRK06277 313 TPLgivAGIFHAINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
199-361 |
9.72e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 45.02 E-value: 9.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 199 PFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSpMLMLSNMNY----LLLFFGCLTMMMSGFTANYEFDLKSVIA 273
Cdd:PRK12561 203 PLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFN-VQMLPDAHVyfapALAILGVVNIIYGALNAFAQDNVKRRLA 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 274 LSTLSQLGLML----SILSMGYPLlSFFHLLIHALFKSLLFLCAGCY---IHKLSdyqdIRFMGSLTYSMPYVSACFNIS 346
Cdd:PRK12561 281 YSSVSHMGFVLlgiaAFTDLGISG-AMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTAS 355
|
170
....*....|....*
gi 2227918626 347 NLSLCGFPFLSGFYS 361
Cdd:PRK12561 356 SMASLALPGMSGFVS 370
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
197-450 |
1.44e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 44.67 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 197 QIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSPMLMLSNMNY---LLLFFGCLTMMMSGFTANYEFDLKSVIA 273
Cdd:MTH00204 225 QIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYfapLIVMLSVIAVIYGSLTTCRQVDFKRLIA 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 274 LSTLSQLGLM-LSILSMGYPLL--SFFHLLIHALFKSLLFLcAGCYIHKLSDYQDIRFMGSLTYSMPYVSACFNISNLSL 350
Cdd:MTH00204 305 YSSVAHMGLVpLGLFTHTIEGLvaAVFLMLAHGFVSSALFI-AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLAN 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 351 CGFPFLSGFYSSDLILefCSYNELNFLIYFMFFFSTGLTAMYSIRLFYYSLIGPNSfNVLCMFNNIGNDMYYGMMLLLLF 430
Cdd:MTH00204 384 MGFPLSCNFVGEFFSL--LAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGS-NYLLFSRDLNRRELLAILPLIIA 460
|
250 260
....*....|....*....|
gi 2227918626 431 TVFGGSLMFWLIFPIPSGVY 450
Cdd:MTH00204 461 IFLLGIVPFIIIDLVKNSLV 480
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
41-88 |
2.12e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 39.33 E-value: 2.12e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 2227918626 41 SLNSSVIVMALILDWMSLIFMSFVLMISSLVMFYSNSYMEGDLFIDRF 88
Cdd:pfam00662 3 SVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
54-360 |
1.46e-03 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 41.53 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 54 DWMSLIFMSFVLMISSLVMFYSNSYME-GDLFIDRFVILVFLFVLSMMFLILSPNLISILLGWDGLGLISYCLVIYY-QN 131
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 132 FSSSNAGLLTAYTNRVGDVFILLSIAWM-------LNFGSWNYIYYYDFFFNSYDCWLMCLMIMFAAMTSSAQIPFSSWL 204
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLyglsggeIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 205 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSPMLM--LSNMNYLLL-FFGCLTMMMSGFTANYEFDLKSVIALSTLSQL 280
Cdd:CHL00049 238 PDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFyfSSNEWHLLLeILAILSMILGNLIAITQTSMKRMLAYSSIGQI 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 281 GLMLSILSMGYPLLSFFHLLIHALFKSLLFLCA-GCYI-HKLSDYQD-IRFMGSLTYSMPYVSACFNISNLSLCGFPFLS 357
Cdd:CHL00049 317 GYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTfACIVlFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLA 396
|
...
gi 2227918626 358 GFY 360
Cdd:CHL00049 397 GFF 399
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
184-408 |
8.62e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 38.65 E-value: 8.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 184 CLMIMFAAMTSSAQIPFSSWLPAAMAAPTPVSALvhssTLVTagvylLIRFSPMLML----SNMNY-LLLFFGCLTMMMS 258
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTAL----ILST-----WQKLAPLTLLlmtsNSLNPtLLLTLAILSTLIG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918626 259 GFTANYEFDLKSVIALSTLSQLGLMLSILSMGyPLLSFFHLLIHALFKSLLFLcagcyIHKLSDYQDIRFMGSLTYSMPY 338
Cdd:MTH00112 166 GWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPT 239
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2227918626 339 VSACFNISNLSLCGFPFLSGFYSSDLILEFCSYNELNFLIYFMFFFSTgLTAMYSIRLFYYSLI--GPNSFN 408
Cdd:MTH00112 240 LNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSL-LSLFFYLRLTYISTItlPPNTTN 310
|
|
| |
