|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
16-440 |
6.17e-133 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 389.90 E-value: 6.17e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 16 LMSSWWLVQFWFFFFSLLFIFFGDFTFFFVNLSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSSYFPNLYLFMVLIL 95
Cdd:MTH00163 17 LKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNYSNLFLFLILFL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 96 MFSLYCTFCSLSLFNFYLFFEFSLIPTLMLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFILRDS 175
Cdd:MTH00163 97 LIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFF 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 176 C-FSIYFYFGMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFG 254
Cdd:MTH00163 177 GsLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSKLGLKFNYIWISISLVG 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 255 GVFVSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGF 334
Cdd:MTH00163 257 GVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGL 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 335 ISFMPSMTLWWFLLTVGNMSAPPSLNLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSS 414
Cdd:MTH00163 337 LNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQHGKYYSGLYSCSS 416
|
410 420
....*....|....*....|....*.
gi 2227918641 415 CYFMEFHLLFLHWLPLNIFFLCCYYF 440
Cdd:MTH00163 417 GKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
47-440 |
1.90e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 334.12 E-value: 1.90e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 47 LSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLI 126
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 127 LGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLG----GLCYFILRDSCFSIYFYFGMVMAFLVKFPVYMFHLWL 202
Cdd:MTH00150 96 LGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGssfmLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 203 PKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMSL 282
Cdd:MTH00150 176 PKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSL 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 283 IIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNLM 362
Cdd:MTH00150 256 VLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLL 335
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2227918641 363 GEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPLNIFFLCCYYF 440
Cdd:MTH00150 336 SEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
47-435 |
3.52e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 314.22 E-value: 3.52e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 47 LSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLI 126
Cdd:MTH00205 49 ISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 127 LGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFILRDSCFSIY----FYFGMVMAFLVKFPVYMFHLWL 202
Cdd:MTH00205 129 LGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFylflYWIFLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 203 PKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMSL 282
Cdd:MTH00205 209 PKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 283 IIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNLM 362
Cdd:MTH00205 289 MVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLA 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2227918641 363 GEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPLNIFFL 435
Cdd:MTH00205 369 SEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILIL 441
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
46-436 |
2.10e-98 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 302.04 E-value: 2.10e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLML 125
Cdd:MTH00014 50 MFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 126 ILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFILRDSCFSIYFY----FGMVMAFLVKFPVYMFHLW 201
Cdd:MTH00014 130 ILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPPSIYLMnlwwLITILAFMVKMPLYTVHLW 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 202 LPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMS 281
Cdd:MTH00014 210 LPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 282 LIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNL 361
Cdd:MTH00014 290 LMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINL 369
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2227918641 362 MGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPLNIFFLC 436
Cdd:MTH00014 370 LSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILK 444
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
46-430 |
3.39e-89 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 278.40 E-value: 3.39e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWIC--SLMIMSSLSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTL 123
Cdd:MTH00044 52 NLSLSLATDSLSSPLIILSCWLAplSLLASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 124 MLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGL--------CYFILRDSCFSIYFYFGMVmAFLVKFPV 195
Cdd:MTH00044 132 ILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLsiplselnWLTSLSSNSSSIWWIFCIL-AFLVKMPI 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 196 YMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVfkcISFFSLDFNFFI----VLFSLFGGVFVSLICLRQLDIKML 271
Cdd:MTH00044 211 YGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRL---INLFSLPSANNIsfilIVFCCWGALITSIICLRQTDLKAL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 272 IAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVG 351
Cdd:MTH00044 288 IAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAA 367
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2227918641 352 NMSAPPSLNLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPL 430
Cdd:MTH00044 368 NLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPL 446
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
46-435 |
1.04e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 276.82 E-value: 1.04e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSSYFPN--LYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTL 123
Cdd:MTH00206 50 FSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRqrIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 124 MLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFILRDSCFSIYF----YFGMVMAFLVKFPVYMFH 199
Cdd:MTH00206 130 LLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNnnlwWLACILAFLVKLPLYGVH 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 200 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAH 279
Cdd:MTH00206 210 LWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSH 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 280 MSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSL 359
Cdd:MTH00206 290 MSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFP 369
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2227918641 360 NLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPLNIFFL 435
Cdd:MTH00206 370 NLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLIL 445
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
46-430 |
2.57e-87 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 273.61 E-value: 2.57e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSSYFPN--LYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTL 123
Cdd:MTH00124 51 NLTQWLGIDQISAPLLVLSCWLLPLMILASQNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 124 MLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFILR-------DSCFSIYFYFGMVMAFLVKFPVY 196
Cdd:MTH00124 131 ILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLQlthptltNSWTNLLLWLACLMAFMVKMPLY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 197 MFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNF-FIVLfSLFGGVFVSLICLRQLDIKMLIAYS 275
Cdd:MTH00124 211 GLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYpFLTL-ALWGALMTSLICLRQTDLKSLIAYS 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 276 SIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSA 355
Cdd:MTH00124 290 SVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMAL 369
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2227918641 356 PPSLNLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPL 430
Cdd:MTH00124 370 PPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPL 444
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
51-435 |
1.17e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 269.09 E-value: 1.17e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 51 FGLDYLSWLMVLLSFWICSLMIMSSLSISFS--SYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLILG 128
Cdd:MTH00068 56 FGIDQISSPLLILTCWLLPLMILASQNHLKNepINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITR 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 129 WGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFILRDSCFSIY-------FYFGMVMAFLVKFPVYMFHLW 201
Cdd:MTH00068 136 WGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPMQLmtytnkiWWLACLLAFMVKMPLYGLHLW 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 202 LPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMS 281
Cdd:MTH00068 216 LPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMG 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 282 LIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNL 361
Cdd:MTH00068 296 LVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNL 375
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2227918641 362 MGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPLNIFFL 435
Cdd:MTH00068 376 WGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLIL 449
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
46-430 |
2.94e-80 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 255.20 E-value: 2.94e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISF--SSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTL 123
Cdd:MTH00110 51 NFSLLFFSDSLSTPLLILTTWLLPLMLMASQHHLSkePLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 124 MLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFI-------LRDSCFSIYFYFGMVMAFLVKFPVY 196
Cdd:MTH00110 131 IIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLlqlwaqpLPNSWSNNLLWLACMMAFMVKMPLY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 197 MFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSS 276
Cdd:MTH00110 211 GLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 277 IAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAP 356
Cdd:MTH00110 291 VSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALP 370
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2227918641 357 PSLNLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPL 430
Cdd:MTH00110 371 PTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPL 444
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
46-430 |
8.68e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 228.30 E-value: 8.68e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWICSLMIMSSL--SISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTL 123
Cdd:MTH00127 52 SLNLYMATDPLSTPLLVLTCWLLPLMILASQnhTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 124 MLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFILR-------DSCFSIYFYFGMVMAFLVKFPVY 196
Cdd:MTH00127 132 IIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQysqplqlSSWADKLWWAGCLLAFLVKMPLY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 197 MFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSS 276
Cdd:MTH00127 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 277 IAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAP 356
Cdd:MTH00127 292 VSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALP 371
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2227918641 357 PSLNLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPL 430
Cdd:MTH00127 372 PLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPL 445
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
46-397 |
3.92e-54 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 187.60 E-value: 3.92e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSSyfPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLML 125
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKR--PKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 126 ILGWGYqPERISAALYLIIYTLL--ASLPLLSSILWLDSYLGGLCYFILRDSCFS----IYFYFGMVMAFLVKFPVYMFH 199
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAgsLLMLVAILALYFLAGALTFDIAELAAAPLPltaqLLLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 200 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVfkCISFF---SLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSS 276
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRF--ALPLFpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 277 IAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAP 356
Cdd:COG1008 308 VSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLP 387
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2227918641 357 PSLNLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIY 397
Cdd:COG1008 388 GTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
83-397 |
1.22e-50 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 178.33 E-value: 1.22e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 83 YFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDS 162
Cdd:MTH00204 109 FLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYS 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 163 YLGGLCYFILR----DSCFSIYFYFGMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIR----VFK 234
Cdd:MTH00204 189 ITGTTDYQILLniklPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRfswpLFP 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 235 CISFFsldFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFC 314
Cdd:MTH00204 269 AASEY---FAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFI 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 315 LSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSL 394
Cdd:MTH00204 346 AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSL 425
|
...
gi 2227918641 395 YIY 397
Cdd:MTH00204 426 YLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
88-405 |
3.89e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 171.39 E-value: 3.89e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 88 YLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGL 167
Cdd:MTH00217 111 FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 168 CYFILrdSCFSI-----YFYF-GMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRV-FKCISFFS 240
Cdd:MTH00217 191 DYQAL--CCLKIekelqYFIFlGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEAS 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 241 LDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISY 320
Cdd:MTH00217 269 EYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLY 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 321 ERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSAS 400
Cdd:MTH00217 349 ERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRV 428
|
....*
gi 2227918641 401 QHGVP 405
Cdd:MTH00217 429 CFGAP 433
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
46-365 |
4.63e-48 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 171.28 E-value: 4.63e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSSyfPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLML 125
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASWESIQKR--VKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 126 ILGWGyQPERISAALYLIIYTLLASLPLLSSILWLdSYLGGLCYFILRDSCFSIYF------YFGMVMAFLVKFPVYMFH 199
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGL-YFLGGGTFDLLELLNLPLPFgvqtwlFLAFFIAFAVKVPLFPLH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 200 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVfkCISFF---SLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSS 276
Cdd:TIGR01972 224 TWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRF--NLPLFpdaSLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 277 IAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAP 356
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
....*....
gi 2227918641 357 PSLNLMGEI 365
Cdd:TIGR01972 382 GTSGFVGEF 390
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
46-397 |
1.43e-47 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 170.38 E-value: 1.43e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSfwicSLMIMSSLSISFSSYFPNLYLFMVLILMFSLYC--TFCSLSLFNFYLFFEFSLIPTL 123
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLT----ALLTPLAVLASWEEIKKRVKFYMAALLWLEGGVigVFAALDLLLFYVFFEAMLIPMY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 124 MLILGWGYqPERISAALYLIIYTLL----ASLPLLSSILWLDSYLGGLCYFILRDSCFS----IYFYFGMVMAFLVKFPV 195
Cdd:PRK05846 149 FLIGVWGG-KNRIYAATKFFLYTLLgsllMLVAIIYLVVVYYNATGTFDIADLLNLPLPpgvqYWLFLAFFIAFAVKMPM 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 196 YMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVfkCISFF---SLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLI 272
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRF--SLPLFpdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 273 AYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGN 352
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2227918641 353 MSAPPSLNLMGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIY 397
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-377 |
1.77e-46 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 162.10 E-value: 1.77e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 105 SLSLFNFYLFFEFSLIPTLMLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFIL-------RDSCF 177
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltggLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 178 SIYFYFGMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFGGVF 257
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 258 VSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLS-NISYERLGSRLFILNKGFIS 336
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2227918641 337 FMPSMTLWWFLLTVGNMSAPPSLNLMGEIGLFNSLISYSSY 377
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWI 281
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
51-405 |
1.41e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 165.09 E-value: 1.41e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 51 FGLDYLSWLMVLLSFWI--CSLMImsslSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLILG 128
Cdd:MTH00226 98 FAVDGISIYFIILTGFIvpCSILI----SWHSVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGI 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 129 WGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFILRDSCFSI------YFYFGMVMAFLVKFPVYMFHLWL 202
Cdd:MTH00226 174 WGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVseqtqkWIFLGIFLAMAVKIPIFPFHIWL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 203 PKAHVEAPVSGSMILAGVLLKLGGYGLIRV-FKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMS 281
Cdd:MTH00226 254 PKAHVEAPVAGSVLLAGILLKLGGYGLVRLsWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 282 LIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNL 361
Cdd:MTH00226 334 LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2227918641 362 MGEIGLFNSLISYSSYLMFFLFFMSFFGCVYSLYIYSASQHGVP 405
Cdd:MTH00226 414 IGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAP 457
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
63-434 |
5.46e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 142.35 E-value: 5.46e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 63 LSFWICSLMIMSSLSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLILGWGYQPERISAALYL 142
Cdd:MTH00094 39 FVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 143 IIYTLLASLPLLSSILWLDSYLGgLCYFilrDSCFSIYFYFGMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLL 222
Cdd:MTH00094 119 LFYAAFFSFPFLFVYLKNFFFFS-LCYF---DFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 223 KLGGYGLIRVFKCISFFsldFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLM 302
Cdd:MTH00094 195 KLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMM 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 303 IGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNLMGEIGLFNSLISYSSYLMFFL 382
Cdd:MTH00094 272 LAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFI 351
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2227918641 383 FFMSFFGCVYSLYIYSASQHGVPFSGVYTMSSCYFMEFHLLFLHWLPLNIFF 434
Cdd:MTH00094 352 FFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMFNMFWLSLFY 403
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-322 |
1.66e-29 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 120.14 E-value: 1.66e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 47 LSFNFGLDYLSWLMVLLSFWICSLMImssLSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLI 126
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSI---FASWKVTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 127 LGWGYQpERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFI----LRD--SCFSIYFYFGMVMAFLVKFPVYMFHL 200
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSypLALELLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 201 WLPKAHVEAPVSGSMILAGVLLKLGGYGLIRV-FKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAH 279
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSH 286
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2227918641 280 MSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYER 322
Cdd:PRK12561 287 MGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYER 329
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-377 |
4.66e-29 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 117.94 E-value: 4.66e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 47 LSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLI 126
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 127 LGWGYqPERISAAL-YLIIytllaslpllssilwldSYLGGLCYFIlrdSCFSIYFYFG--------------------- 184
Cdd:COG0651 148 ALGGT-KEALRAGLkYLIL-----------------NLVGSALFLL---GVGLLYGATGtlnmadlaarlaeldpgllla 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 185 ----MVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCI--SFFSLDFNFFIVLFSLFGGVFV 258
Cdd:COG0651 207 afalLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVG 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 259 SLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFM 338
Cdd:COG0651 287 ALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRM 366
|
330 340 350
....*....|....*....|....*....|....*....
gi 2227918641 339 PSMTLWWFLLTVGNMSAPPSLNLMGEIGLFNSLISYSSY 377
Cdd:COG0651 367 PLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAW 405
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
95-341 |
4.92e-26 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 110.03 E-value: 4.92e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 95 LMFSLYC----TFCSLSLFNFYLFFEFSLIPTLMLILGWGYQpERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYF 170
Cdd:CHL00011 117 LMLAMYSgqigLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSNEPTL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 171 ILRDSC-------FSIYFYFGMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRV-FKCISFFSLD 242
Cdd:CHL00011 196 NFETLAnqsypvaLEILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSI 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 243 FNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYER 322
Cdd:CHL00011 276 FSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDR 355
|
250 260
....*....|....*....|.
gi 2227918641 323 LgsRLFILNK--GFISFMPSM 341
Cdd:CHL00011 356 I--RLVYLDEmgGIAIPMPKI 374
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-322 |
1.78e-25 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 108.64 E-value: 1.78e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 45 VNLSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISfssYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLM 124
Cdd:PRK02546 77 LGLTWSVGADGLSMPLILLTGFITTLAVLAAWPVT---FKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 125 LILGWGYQpERISAALYLIIYTLLASLPLLSSILWLDSYlGGLCYFILRD-------SCFSIYFYFGMVMAFLVKFPVYM 197
Cdd:PRK02546 154 LLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFY-GDTPTFDMTAlaakdfgLGFQLLCYAGLLIAYGVKLPIVP 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 198 FHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRV-FKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSS 276
Cdd:PRK02546 232 LHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSS 311
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2227918641 277 IAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYER 322
Cdd:PRK02546 312 ISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDR 357
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
47-355 |
3.99e-24 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 104.40 E-value: 3.99e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 47 LSFNFGLDYLSWLMVLLSFWICSLMIMSSLSISFSsyfPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLI 126
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDESIQR---PRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 127 LGWGYQpERISAALYLIIYTLLASLPLLSSILWLdSYLGGLCYFILR-------DSCFSIYFYFGMVMAFLVKFPVYMFH 199
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGILILVSFLGL-VWLSGASSFDYEplrshtlPLSTQLLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 200 LWLPKAHVEAPVSGSMILAGVLLKLGGYGLIR-----VFKCISFFSLDFNFFIVLFSLFGgvfvSLICLRQLDIKMLIAY 274
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRfgvglFPEAWVYLAPWLATWAVVSVLYG----ASCAIAQKDMKKMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 275 SSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMS 354
Cdd:PRK06473 302 SSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMA 381
|
.
gi 2227918641 355 A 355
Cdd:PRK06473 382 S 382
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
45-368 |
1.79e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 90.54 E-value: 1.79e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 45 VNLSFNFGLDYLSWLMVLLSfwiCSLMIMSSLSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLM 124
Cdd:PRK07363 69 LGLSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 125 LILGWGYQpERISAALYLIIYTLLASLPLLSSILWLDSYLGG--LCYFILRDSCFS----IYFYFGMVMAFLVKFPVYMF 198
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGStsFDYDAISTQNLSlntqLILLTGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 199 HLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVfkCISFFSLDFNFFIVLFSLFGGVFV---SLICLRQLDIKMLIAYS 275
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRF--GLQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 276 SIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSR-LFILNkGFISFMPSMTLWWFLLTVGNMS 354
Cdd:PRK07363 303 SIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRdLDVLN-GLMNPIRGLPLTSALLVLAGMA 381
|
330
....*....|....
gi 2227918641 355 APPSLNLMGEIGLF 368
Cdd:PRK07363 382 SAGIPGLVGFVAEF 395
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
86-326 |
1.04e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 84.93 E-value: 1.04e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 86 NLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLIlGWGYQPERISAA-LYLIIYTLLASLPLLSSilwldsyl 164
Cdd:PRK08375 106 TRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMGGDRRALAAArKYLIVGLIGSTFLLIGV-------- 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 165 gGLCYFI-------------LRDSCFSIYFYFgMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIR 231
Cdd:PRK08375 177 -GLLYGVtgtlnmadlagalAENPTVVTAFGF-VLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIR 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 232 ----VFKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGL 307
Cdd:PRK08375 255 iyftVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHAL 334
|
250
....*....|....*....
gi 2227918641 308 CSSGLFCLSNISYERLGSR 326
Cdd:PRK08375 335 MKGALFLAAGAIEVTYGTR 353
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
51-377 |
1.80e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 78.04 E-value: 1.80e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 51 FGLDYLSWLMVLLSfwicsLMIMSSLSISFSSYFPNLYLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLILGWG 130
Cdd:MTH00062 41 FIFDSLSFYLILLV-----LFLGLYSQVMFYNLLSGVSRFFLFLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSES 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 131 YQPERISAALYLIIYTLLASLPLLSSILWLdSYLGGLCYFILRDSCFSIYF--YFGMVMAFLVKFPVYMFHLWLPKAHVE 208
Cdd:MTH00062 116 PYSERYLASWYFLGYLLLTSLPLLLCLLYL-SLVNGSFNFSDWGSDDSVSLivYYVLSFMFITKVPLFPFHTWLPIVHAE 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 209 APVSGSMILAGVLLKLGGYGLIRvfkCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIAHMSLIIGGLF 288
Cdd:MTH00062 195 ASSPVSIFLSGYIMKLGLLGVYR---FCGFIFSGSFLGYLFLCCLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLF 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 289 TMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNLMGEIGLF 368
Cdd:MTH00062 272 VGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLV 351
|
....*....
gi 2227918641 369 NSLISYSSY 377
Cdd:MTH00062 352 SSSFGVLVY 360
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-377 |
2.12e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 78.09 E-value: 2.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 185 MVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCI-------SFFSLDFNFFIVLFSLFGGVF 257
Cdd:PRK12667 229 ALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIfgispslIDFRAALSPILIILGAVSAII 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 258 VSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISF 337
Cdd:PRK12667 309 GALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRK 388
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2227918641 338 MPSMTLWWFLLTVGNMSAPPSLNLMGEIGLFNSLISYSSY 377
Cdd:PRK12667 389 MPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFY 428
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
94-372 |
4.66e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.38 E-value: 4.66e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 94 ILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLILGWGYQPERISAALYLIIYTLLASLPLLSSILWLDSYLGGLCYFILR 173
Cdd:PRK08667 119 LFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLG 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 174 DSCFSIYFYF-GMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSL 252
Cdd:PRK08667 199 ASAGILSLVFlLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGS 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 253 FGGVFVSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGS-----------IFLMIGHGLCSSGLFCLSNISYE 321
Cdd:PRK08667 279 ISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLdtlallalggaLFHSLNHALFKSLLFLTAGSVVH 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2227918641 322 RLGSRLFILNKGFISFMPSMTLWWFLLTVGNMSAPPSLNLMGEIGLFNSLI 372
Cdd:PRK08667 359 ATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
193-364 |
8.17e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 73.04 E-value: 8.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 193 FPVymfHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRvFKCISFFSLDFNF---FIVLFSLFGGVFVSLICLRQLDIK 269
Cdd:PRK06458 231 FPM---HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLR-YYILIDAAIGSDFpgrLLLIFGLLSVLVAAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 270 MLIAYSSIAHMSLI-----IGGLFtmnvwGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPsmTLW 344
Cdd:PRK06458 307 RLFAYSSIEHMGLIafalgIGGPL-----GIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSP--LTG 379
|
170 180
....*....|....*....|....
gi 2227918641 345 WFL----LTVGNMsaPPSLNLMGE 364
Cdd:PRK06458 380 WGLmlgaLAIAGM--PPFGVFISE 401
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
185-328 |
4.94e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 64.39 E-value: 4.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 185 MVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFK--CISFFSLDFNFFIVLFSLFGGVFVSLIC 262
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSAllRQSGAAEQFSNVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2227918641 263 LRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLF 328
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRF 357
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
46-313 |
8.42e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.86 E-value: 8.42e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWICSLMI--MSSLSISFSSYFPNLYLFMVLilmfSLYCTFCSLSLFNFYLFFEFSLIPTL 123
Cdd:PRK08668 60 GFKLTFTLTHLSWFFAMISLLVIFSVAffMVSEKTKNDAYFNMFALMSLA----GVLGVFLANDLLTLYIFWEIMTFSSF 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 124 MLILgWGYQPERISAALYLII-----YTLLASLPLLSSILWLDSYLGGLCYFILRDSCFSIYFYFGMVMAF-LVKFPVYM 197
Cdd:PRK08668 136 MMVP-MGKKESRKASLKYFVLsaigaYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFLFLLAFgVAKAGIFP 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 198 FHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNF--------FIVLFSLFGGVFV---SLICLRQL 266
Cdd:PRK08668 215 LHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFgtyrgvplFNYILAWLGNISIivgTLMAILQE 294
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2227918641 267 DIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLF 313
Cdd:PRK08668 295 DIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-322 |
7.17e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 60.74 E-value: 7.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 187 MAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVfkciSFFSLDFNFFIVLFSLFGGVFVSLICLRQL 266
Cdd:PRK07234 192 LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRC----ALDVPGLDLIVRIFGVGTALLGVLFALLEK 267
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 2227918641 267 DIKMLIAYSSIAHMSLIIGGlftMNVWGLYGsiflmIGHGLCSSGLFCLSNISYER 322
Cdd:PRK07234 268 DLKRMLAFSTISQLGFILAA---PLVGGLYA-----LAHGLVKSTLFLCAGALPSR 315
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
191-373 |
2.85e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.98 E-value: 2.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 191 VKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCI-----SFFSLDFNFFIVLFSLFGGVFVSLICLRQ 265
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVFGSVLAILS 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 266 LDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLWW 345
Cdd:PRK12662 301 KDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAF 380
|
170 180
....*....|....*....|....*...
gi 2227918641 346 FLLTVGNMSAPPSLNLMGEIGLFNSLIS 373
Cdd:PRK12662 381 VLLSLSLIGMPPTSGFVAKWYILDAFIK 408
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
198-360 |
7.99e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 54.51 E-value: 7.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 198 FHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVfkcisffSLDF--------NFFIVLFSLFGGVFVSLICLRQLDIK 269
Cdd:PRK06521 229 LHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRV-------VFDLlgapgwwwGVLVLALGAISAVLGVLYALAEHDLK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 270 MLIAYSSIAHMSLI---IG--------GLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRlfILNK--GFIS 336
Cdd:PRK06521 302 RLLAYSTIENIGIIfvgLGlamvfiayGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTR--DMEKlgGLIR 379
|
170 180
....*....|....*....|....
gi 2227918641 337 FMPsMTLWWFLLTVGNMSAPPSLN 360
Cdd:PRK06521 380 RMP-WTAWAFLIGCLAISALPPLN 402
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
88-360 |
1.43e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.56 E-value: 1.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 88 YLFMVLILMFSLYCTFCSLSLFNFYLFFEFSLIPTLMLILGWGYQPERISAAL-YLIIYTLLASLPLLSSILWLDSY--- 163
Cdd:PRK08376 123 YYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSMVLLGIALLYGQYgtl 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 164 -LGGLCYFI-LRDSCFSIYFYFGMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILagVLLKLGG-YGLIRVfkCISFFS 240
Cdd:PRK08376 203 nMAYLAVKMsENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARV--LFSIYG 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 241 LDFN-----FFIVLF---SLFGGVFVSLIclrQLDIKMLIAYSSIAHMSLIIGGL-FTMNVWG-----------LYGSIF 300
Cdd:PRK08376 279 PAINlatvgWVIIILgclTMFVGVAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgVGLAALGdpamasygeiaLAGGIY 355
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2227918641 301 LMIGHGLCSSGLFCLSNISYERLGSRlfILNK--GFISFMPsMTLWWFLLTVGNMSAPPSLN 360
Cdd:PRK08376 356 HIVNHALYKALLFLTAGAVIYETGTR--NLNElgGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
185-313 |
9.76e-07 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 50.92 E-value: 9.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 185 MVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRV----FKCISFFSldFNFFIVLFSLFGGVFVSL 260
Cdd:PRK08377 212 LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARIlylmQNANGWSS--VLKLVIIMATLTVFFAEL 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2227918641 261 ICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLF 313
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLF 342
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-343 |
8.75e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.04 E-value: 8.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 185 MVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVfKCISFFSLDFNFFIVLFSLFGGVFVSLICLR 264
Cdd:PRK12665 215 LLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRT-HTLLFPGGGLDTLLMVVALLTMVVGILGAIA 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 265 QLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGS----RLFILNK-----GFI 335
Cdd:PRK12665 294 QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSsslrRLGGLAKaspllAVL 373
|
....*...
gi 2227918641 336 SFMPSMTL 343
Cdd:PRK12665 374 FFVPALNL 381
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
185-326 |
1.93e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 46.87 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 185 MVMAFLVKFPVYMFHlWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLF----SLFGGVFVSL 260
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATmaaiTMVIGALGAL 291
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2227918641 261 IclrQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSR 326
Cdd:PRK12663 292 A---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYR 354
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
185-313 |
4.64e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 45.71 E-value: 4.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 185 MVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFK-CISFFSLDFNFFIVLFSLFGGVFVSLICL 263
Cdd:TIGR01770 209 ILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFGAL 288
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2227918641 264 RQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLF 313
Cdd:TIGR01770 289 AQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
181-360 |
9.13e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 44.75 E-value: 9.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 181 FYFGMVMAFL---VKFPVYMFHLWLPKAhVEAPV-------SGSMILAGVLLklggyglirVFKCISFFSL-DFNFFIVL 249
Cdd:PRK12646 209 FIPMIFMFLLgafTKSAQFPFHIWLPRA-MAAPTpvsaylhSATMVKAGIFL---------LFRFTPLLGLsNMYIYIVT 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 250 F-SLFGGVFVSLICLRQLDIKMLIAYSSIAHMSLI-----IGGLFTMNVWG---------LYGSIFLMIGHGLCSSGLFC 314
Cdd:PRK12646 279 FvGLITMLFGSITALKQWDLKGILAYSTISQLGMImamvgIGGGYAQHQQDaiasiyvfvLFAALFHLMNHAIFKCALFM 358
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2227918641 315 LSNISYERLGSRLFILNKGFISFMPSMTLwWFLLTVGNMSAPPSLN 360
Cdd:PRK12646 359 GVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLN 403
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
178-313 |
1.03e-04 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 44.34 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 178 SIYFYFGMVM---AFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLlKLGGYG-LIRVFkCISFFSLDFNFFIVL---- 249
Cdd:COG1007 199 SPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAaLLRLL-VEAFPGLAADWQLLLavla 276
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2227918641 250 -FSLFGGvfvSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLF 313
Cdd:COG1007 277 vLSMTVG---NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAF 338
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
178-313 |
1.18e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.43 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 178 SIYFYFGMVM---AFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLlKLGGYG-LIRVFKcISFFSLDFNFFIVLFSLF 253
Cdd:PRK05777 200 SLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLV-VAFGGLSEDWQQVLAIIA 277
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2227918641 254 GG--VFVSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLF 313
Cdd:PRK05777 278 IAsmLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
192-326 |
2.07e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 43.88 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 192 KFPvymFHLWLPKAHVEA-PVSGSMILAGVLlKLGGYGLIRvfkcisfFSLDF------NFFIVLFSLFGGVFVSLICLR 264
Cdd:PRK12650 224 QFP---FHFWLPEAMAAItPVSAFLHAAAVV-KAGIYLLLR-------FSPVFhdvavwNWLLIIVGMITALMGAVFAVQ 292
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2227918641 265 QLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSR 326
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTR 354
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-320 |
5.99e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 42.24 E-value: 5.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 193 FPVYmfhLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLF-SLFGGVFVSLICLRQLDIKML 271
Cdd:PRK07691 226 FPLY---FWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILIlALLTIIFGVIGAVAYFDIKKI 302
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2227918641 272 IAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISY 320
Cdd:PRK07691 303 IIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMI 351
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
46-102 |
2.11e-03 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 37.50 E-value: 2.11e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2227918641 46 NLSFNFGLDYLSWLMVLLSFWICSLMIM--SSLSISFSSYFPNLYLFMVLILMFSLYCT 102
Cdd:pfam01059 52 NLSYFLGIDSLSYPLIILSCWLLPLMILasQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
199-360 |
3.48e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 39.81 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 199 HLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFFIVLFSLFGGVFVSLICLRQLDIKMLIAYSSIA 278
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 279 HMSLIIGGLF-----------TMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSRLFILNKGFISFMPSMTLwWFL 347
Cdd:PRK08042 280 NIGIILLGLGagvtgialeqpALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI-AML 358
|
170
....*....|...
gi 2227918641 348 LTVGNMSAPPSLN 360
Cdd:PRK08042 359 VGLMAMAALPPLN 371
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
183-326 |
6.62e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 38.64 E-value: 6.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 183 FGMVMAFLVKFPVYMFHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRVFKCISFFSLDFNFF-----IVLFSLFGGVF 257
Cdd:PRK06589 214 LLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFY 293
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2227918641 258 VSLICLRQLDIKMLIAYSSIAHMSLIIGGLFTMNVWGLYGSIFLMIGHGLCSSGLFCLSNISYERLGSR 326
Cdd:PRK06589 294 SSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKED 362
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
198-313 |
8.90e-03 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 38.59 E-value: 8.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2227918641 198 FHLWLPKAhVEAPVSGS-------MILAGVLLklggygLIRVFkciSFFSL--DFNFFIVLFSLFGGVFVSLICLRQLDI 268
Cdd:COG1009 230 LHFWLPDA-MEGPTPVSallhaatMVKAGVYL------LARLS---PLFALspVWLTVVAIIGAITALFAALIALAQTDI 299
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2227918641 269 KMLIAYSSIAHMSLIIGGLFTMNVWglyGSIFLMIGHGLCSSGLF 313
Cdd:COG1009 300 KRVLAYSTVSQLGYMFLALGVGAYV---AALFHLLTHAFFKALLF 341
|
|
| |
