|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
1.66e-154 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 437.36 E-value: 1.66e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 1 MNPIALMPIITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 81 TGQWNVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTNILLTFALL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 161 SALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILWNKNPTI 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 241 TLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKWQLQPT 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330
....*....|....
gi 2267398310 321 KFTLFLSPLITLST 334
Cdd:MTH00105 321 KPMTLLPTLIILST 334
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
3.81e-114 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 334.85 E-value: 3.81e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 1 MNPIALMPIITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 81 TGQWNVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSmNTNILLTFALL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 161 SALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILWNKNPTI 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 241 TLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKWQLQPT 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330
....*....|....
gi 2267398310 321 KFTLFLSPLITLST 334
Cdd:MTH00135 320 QLTLPLAISTTATL 333
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
7.72e-106 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 313.78 E-value: 7.72e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 1 MNPIALMPIITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 81 TGQWNVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTNILLTFALL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 161 SALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILWNKNPTI 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 241 TLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKWQLqPT 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRF-KN 319
|
330
....*....|....
gi 2267398310 321 KFTLFLSPLITLST 334
Cdd:MTH00070 320 KTNNLLSLTIILSL 333
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
3.47e-105 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 312.14 E-value: 3.47e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 1 MNPIALMPIITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 81 TGQWNVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTNILLTFALL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 161 SALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILWNKNPTI 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 241 TLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKWQLQPT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330
....*....|....
gi 2267398310 321 KFTLfLSPLITLST 334
Cdd:MTH00112 321 KNTL-TATLTTLST 333
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-307 |
2.38e-78 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 243.68 E-value: 2.38e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 1 MNPIALMPIITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMY 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 81 TGQWNVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTNILLTFALL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 161 SALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILWNKNPTI 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398310 241 TLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPT 307
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
2.35e-77 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 241.03 E-value: 2.35e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 1 MNPIALMPIITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 81 TGQWNVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTNILLTFALL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 161 SALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILWNKNPTI 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 241 TLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKWQLQPT 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
....*..
gi 2267398310 321 KFTLFLS 327
Cdd:MTH00200 321 SNLLVGL 327
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
10-315 |
1.21e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 168.91 E-value: 1.21e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 10 ITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTni 89
Cdd:MTH00144 10 LFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM-- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 90 hnllttLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNT-NILLTFALLSALVGGWG 168
Cdd:MTH00144 88 ------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 169 GLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILwNKNPTITLMILTSL 248
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYKTGLSIISLL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398310 249 LSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKW 315
Cdd:MTH00144 241 LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-333 |
8.44e-49 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 166.92 E-value: 8.44e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 1 MNPIALMPIITTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMY 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 81 TgqwnvtNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIypsMNTNILLTFALL 160
Cdd:MTH00160 82 L------MLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 161 SALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILWNKNPTI 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 241 TLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKWQLQPT 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFS 312
|
330
....*....|...
gi 2267398310 321 KFTLFLSPLITLS 333
Cdd:MTH00160 313 LILNFLSFISLFG 325
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
11-329 |
2.87e-45 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 157.63 E-value: 2.87e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 11 TTIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTnih 90
Cdd:MTH00011 13 STMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLLKNI--- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 91 nllTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTNILLTFALLSALVGGWGGL 170
Cdd:MTH00011 90 ---TALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGM 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 171 NQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILWNKNPTITLMILTSLLS 250
Cdd:MTH00011 167 NQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLS 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398310 251 LGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYStSLTMFPTSNNMKMKWQLQPTKFTLFLSPL 329
Cdd:MTH00011 247 LGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN-FMYLSPTFSSLKSAPYEPKTKILISMCTL 324
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-329 |
7.42e-37 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 135.18 E-value: 7.42e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 12 TIFTGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMytgqwnvTNIHN 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFS-------NLYLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 92 LLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNtnILLTFALLSALVGGWGGLN 171
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFM--GLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 172 QTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSILWNKNPTITLMILTSLLSL 251
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398310 252 GGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKWQLQPTKFTLFLSPL 329
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGLFILLMMML 314
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-298 |
1.16e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 112.42 E-value: 1.16e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 8 PIITTIFTGTMLTMISS-HWLLIWMGLEMNMLAIIPILA-KKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWN 85
Cdd:MTH00199 100 PILILIVALGSLLLVSSiNWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETS 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 86 VTNIHNLLTT----LTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSmnTNILLTFALLS 161
Cdd:MTH00199 180 IQGINSILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPV--TNVVLICAVLS 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 162 ALVGGWGGLNQTQLRKILAYSSIAHMG---WMVAVLTFCP-SLTILNLLIYLMLTITLFT-MLNVNTSTTTLTLSI-LWN 235
Cdd:MTH00199 258 IIYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESiQASLIYMIIYVIMSICSFSiILSLKLTKGLIVEVSgLSR 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398310 236 KNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIY 298
Cdd:MTH00199 338 KNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQ 400
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
18-298 |
1.25e-23 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 100.96 E-value: 1.25e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 18 MLTMISS-HWLLIWMGLEMNMLAIIpILA--KKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTNIHNLLT 94
Cdd:COG1007 115 MMLMASAnDLLTLFLGLELLSLSLY-VLVafRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALA 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 95 TLT------------IIIALTMKLGMTPFHFWIPEVTQG----VTL-------TAGMLLLtwqklapISIMLQIYPSMNT 151
Cdd:COG1007 194 AGGanspllllglvlVLAGLAFKLSAVPFHMWTPDVYEGaptpVTAflatapkIAAFAAL-------LRLLVEAFPGLAA 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 152 NILLTFALLSAL---VGGWGGLNQTQLRKILAYSSIAHMGWM-VAVLTFCP---SLTILNLLIYLMLTITLFTMLNVNTS 224
Cdd:COG1007 267 DWQLLLAVLAVLsmtVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSR 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398310 225 TTTLTLSI-----LWNKNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIY 298
Cdd:COG1007 347 KGGEAEEIedlagLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
13-297 |
1.28e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 101.18 E-value: 1.28e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 13 IFTGTMLTMISSHWLLIWMGLEMNMLAIIPILA-KKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTNIHN 91
Cdd:TIGR01770 111 ALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 92 LLTTLT------------IIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSM-------NTN 152
Cdd:TIGR01770 191 FLSNGMlnisllllgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 153 ILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLML----TITLFTML------NVN 222
Cdd:TIGR01770 271 FLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIyalmSLGAFGVLsllrsyKDE 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2267398310 223 TSTTTLTLSILWNKNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLI 297
Cdd:TIGR01770 351 WIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-297 |
2.65e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 98.95 E-value: 2.65e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 16 GTMLTMISSHWLLIWMGLEMNMLAI-IPILAKKTNPRSTEAATKYFLTQATASMLLMMTIV-------------INAMYT 81
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLfILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCAllcgttgglhlsyINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 82 GQWNVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPsmNTNILLTFALLS 161
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGL--NVNILLIGGLFS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 162 ALVGGWGGLNQTQLRKILAYSSIAHMG---WMVAVLTF-CPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSI--LWN 235
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGfvlWGIEIGSFeSIQASLVYLFIYIIMSICVFSIILALNVYKNLIIEFsgLSR 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2267398310 236 KNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLI 297
Cdd:MTH00196 243 RLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIV 304
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-286 |
1.21e-22 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 95.84 E-value: 1.21e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 23 SSHWLLIWMGLEMNMLAIIPILA-KKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTNIHNLLT------- 94
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 95 ----TLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLL-TWQKLAPISIMLQIYPSMN-----TNILLTFALLSALV 164
Cdd:pfam00361 81 llllFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLIRRSLLYLPsspfiQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 165 GGWGGLNQTQLRKILAYSSIAHMGWMVAVL----TFCPSLTILNLLIYLMLTITLFTMLNVNTSTTTLTLSI-----LWN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIrdyggLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2267398310 236 KNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITA 286
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
15-332 |
5.69e-21 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 93.35 E-value: 5.69e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 15 TGTMLTMISS-HWLLIWMGLEMNMLAIIPILA-KKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTNIHNL 92
Cdd:PRK05777 113 LLGMMVMVSAnDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 93 LTTLT------------IIIALTMKLGMTPFHFWIPEVTQG-----------VTLTAGM-LLLTWQKLAPISIMLQIYPs 148
Cdd:PRK05777 193 LADGSgnsllllfglvfLLVGLAFKLSAVPFHMWTPDVYEGaptpvtaflatAPKIAAFaVLLRLLVVAFGGLSEDWQQ- 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 149 mntnILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWM----VAVLTFCPSLTILNLLIYLMLTITLFTMLNVNTS 224
Cdd:PRK05777 272 ----VLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvglAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRR 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 225 TTTLTLSI-----LWNKNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYs 299
Cdd:PRK05777 348 KGGEAESIsdfagLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIK- 426
|
330 340 350
....*....|....*....|....*....|....*
gi 2267398310 300 tslTMF--PTSNNMKMKWQLQPTKFTLFLSPLITL 332
Cdd:PRK05777 427 ---LMYfdEPPRDAPVNWPLSAGGAVLSVSALLVL 458
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
15-301 |
1.48e-14 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 74.03 E-value: 1.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 15 TGTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTNIHNLLT 94
Cdd:COG0651 118 AGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 95 TLT----------IIIALTMKLGMTPFHFWIPE-----------VTQGVTLTAGMLLLtwqklapISIMLQIYPSMNTN- 152
Cdd:COG0651 198 ELDpglllaafalLLVGFGIKAALFPLHFWLPDaypaapspvsaLLSGLLTKVGVYAI-------LRVLTLLFGADPALf 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 153 ---ILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYL---MLTITLFTMLNVNTSTT 226
Cdd:COG0651 271 lgtLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhALAKALLFLAAGAIERA 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 227 TLTLSI-----LWNKNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTS 301
Cdd:COG0651 351 TGTRDLdklggLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-219 |
8.67e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 69.12 E-value: 8.67e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 16 GTMLTMISSHWLLIWMGLEMNMLAIIPILAKKTNPRST---------EAATKYFLTQATASMLLMMTIVINAMYTGQ--- 83
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNegm 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 84 --------WNVTNI---HNLLTTLTIIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYpsMNTN 152
Cdd:MTH00198 280 lgtilsatLETTNIelrQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLV--ITSK 357
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267398310 153 ILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILN----LLIYLMLTITLFTML 219
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQAswtyAVTYLVSALASFTVI 428
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
55-192 |
9.39e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 59.71 E-value: 9.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 55 AATKYFLTQATASMLLMMTIVINAMYTGQWNvTNIHNLLTT-----------LTIIIALTMKLGMTPFHFWIPEV----- 118
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAGALT-FDIAELAAAplpltaqlllfLAFFIAFAVKVPMFPFHTWLPDAhveap 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 119 TQGVTLTAGMLLltwqKLAP---ISIMLQIYP---SMNTNILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMVA 192
Cdd:COG1008 241 TAGSVLLAGVLL----KMGGyglLRFALPLFPeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLL 316
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
9-297 |
8.81e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 56.60 E-value: 8.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 9 IITTIFTGTMLTMISSHWLLIWMGLEMnmLAIIPILAK---KTNPRSTEAATKYFLTQATAS-MLLMMTIVINAMYTGQW 84
Cdd:PRK02504 115 ILLTATLGGMFLSGATELVMIFISLET--LSIASYLLTgymKRDPRSNEAALKYLLIGAASSaIFLYGSSLLYGLSGGST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 85 NVTNIHNLLT---TLTIIIALTM-------KLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLA----PISIMLQIYPSMN 150
Cdd:PRK02504 193 QLSAIALALItspSLGLALALVFviagiafKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFD 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 151 TNILLTF---ALLSALVGGWGGLNQTQLRKILAYSSIAHMGW----MVAVLTFCPSLTILNLLIYLMLT------ITLFT 217
Cdd:PRK02504 273 EQWKLLFtalAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvmigLVAGTEAGYASMVFYLLAYLFMNlgafacVILFS 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 218 MLNVNTSTTTLTLsiLWNKNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLI 297
Cdd:PRK02504 353 LRTGTDQISDYAG--LYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVI 430
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-334 |
3.37e-08 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 49.18 E-value: 3.37e-08
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 2267398310 291 YFYMRLIYSTSLTMFPTSNNMKMKWQLQPTKFTLFLSPLITLST 334
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSI 44
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-194 |
1.24e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 53.23 E-value: 1.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 48 TNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTNI---------HNLLTTLTIII---ALTmKLGMTPFHFWI 115
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaptilsSPLLTLILLLLllgAFG-KSAQFPLHFWL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 116 PEVTQGVT-----------LTAGMLLLTwqKLAPISIMLQIYpsmnTNILLTFALLSALVGGWGGLNQTQLRKILAYSSI 184
Cdd:COG1009 235 PDAMEGPTpvsallhaatmVKAGVYLLA--RLSPLFALSPVW----LTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
170
....*....|
gi 2267398310 185 AHMGWMVAVL 194
Cdd:COG1009 309 SQLGYMFLAL 318
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
55-191 |
1.88e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 52.63 E-value: 1.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 55 AATKYFLTQATASMLLMMTIVINAMYTG---------QWNVTNIHNLLTTLTIIIALTMKLGMTPFHFWIPEV-TQGVTL 124
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLYFLGGgtfdllellNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAhVEAPTA 236
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398310 125 TAGMLLLTWQKLAPISIM---LQIYPS---MNTNILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMV 191
Cdd:TIGR01972 237 GSVILAGVLLKMGTYGFLrfnLPLFPDaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-191 |
2.74e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 52.13 E-value: 2.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 55 AATKYFLTQATASmlLMMTIVINAMYTGQWNVT---NIHNLLTT-----------LTIIIALTMKLGMTPFHFWIPEV-- 118
Cdd:PRK05846 162 AATKFFLYTLLGS--LLMLVAIIYLVVVYYNATgtfDIADLLNLplppgvqywlfLAFFIAFAVKMPMFPLHTWLPDAhv 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 119 ---TQGVTLTAGMLLltwqKLAP---ISIMLQIYPSMNTN---ILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGW 189
Cdd:PRK05846 240 qapTAGSVLLAGILL----KMGAyglLRFSLPLFPDASHEfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
..
gi 2267398310 190 MV 191
Cdd:PRK05846 316 VT 317
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-210 |
5.68e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 51.03 E-value: 5.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 33 LEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTNIHNLL--------TTLTIIIALTM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaenptvvtAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 105 KLGMTPFHFWIPEvTQGVTLTAGMLLL--TWQKlAPISIMLQIYPSMNT----------NILLTFALLSALVGGWGGLNQ 172
Cdd:PRK08375 215 KAAVFPLHTWLPR-AYPAAPPVVTALLsgLVTK-VAVYALIRIYFTVFGgdfrfalglgWLLAVLALLSMLVGSLAALGQ 292
|
170 180 190
....*....|....*....|....*....|....*...
gi 2267398310 173 TQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLM 210
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLL 330
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
9-194 |
2.32e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 49.27 E-value: 2.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 9 IITTIFTGTMLTMI-SSHWLLIWMGLEMNMLAIIPILAKkTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTGqwnVT 87
Cdd:PRK12650 114 LLMTAFMAAMLLLVlADDVVVLFVAWELVSLASFFLIAR-SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTG---TT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 88 NIHNLL--------TTLTIIIALTM------KLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTN- 152
Cdd:PRK12650 190 SLSGILhsdvwaekPGLTTVVAVLIavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVa 269
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2267398310 153 ----ILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVL 194
Cdd:PRK12650 270 vwnwLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATI 315
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
5.12e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.10 E-value: 5.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 55 AATKYFLTQATASMLLMMTIVINAMYTGQ--WNVTNIHN--------LLTTLTIIIALTMKLGMTPFHFWIP----EVTQ 120
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyplaleLLLYAGFLIAFGVKLPIFPLHTWLPdahgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2267398310 121 GVTLTAGMLLLTWQKLAPISIMLQIYPsmntNILLTFALLSALVGG----WGGLN---QTQLRKILAYSSIAHMG 188
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALIRFNVQMLP----DAHVYFAPALAILGVvniiYGALNafaQDNVKRRLAYSSVSHMG 288
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
27-190 |
1.50e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 46.62 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 27 LLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFLTQATASMLLMMTIVINAMYTG----QWNVTNIHNL------LTTL 96
Cdd:PRK06473 130 LLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGassfDYEPLRSHTLplstqlLLLA 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 97 TIIIALTMKLGMTPFHFWIPEV-----TQGVTLTAGMLLltwqKLAPISIM---LQIYPSMNTNI---LLTFALLSALVG 165
Cdd:PRK06473 210 PILVGFGIKIPLVPFHTWLPDAhveasTPVSVLLAGVLL----KLGTYGLLrfgVGLFPEAWVYLapwLATWAVVSVLYG 285
|
170 180
....*....|....*....|....*
gi 2267398310 166 GWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK06473 286 ASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-190 |
2.46e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 45.86 E-value: 2.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 54 EAATKYFLTQATASMLLMMTIvinAMYTGQWNVTNI----HNLLTTLTI---------IIALTMKLGMTPFHFWIPEVTQ 120
Cdd:PRK08376 172 EAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMaylaVKMSENPTVvakialalfIAGLAMKSGAVPVHMWLPDAYP 248
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398310 121 GV--TLTAGMLLLTWQKLAPIS-IMLQIY-PSMNTN----ILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK08376 249 AApsSISAMLLVIKQAGLYALArVLFSIYgPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
51-325 |
2.72e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.79 E-value: 2.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 51 RSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTNIHNLLTT-----------LTIIIALTMKLGMTPFHFWIPEVT 119
Cdd:PRK06277 147 EAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALLVnptspviygglLLLIFGLLYGSGLPPFHTIKSDIY 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 120 QGVTLTAGMLLLTWQKLAPISIMLQIY---------PSMNTnILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWM 190
Cdd:PRK06277 227 AKAKPFGSALLQTFSKFVLVALMLVIFklfgglsyfPSAQG-VLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 191 VAVLTFCPSLTI-------LNLLIYL-MLTITLFTMLNVNTSTTTLTLSILWNKNPTITLMILTSLLSLGGLPPLTGFLP 262
Cdd:PRK06277 306 AAGLALGTPLGIvagifhaINHVIYKsALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQS 385
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398310 263 KWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKWQLQPTKFTLF 325
Cdd:PRK06277 386 KLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYLKPKPEELEYKNKKVPKYAVFSLA 448
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
17-210 |
2.59e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 42.82 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 17 TMLTMISSHWLLIWMGLEMNML---AIIPILAKKTNprsTEAATKYFLTQATA------SMLLMMTIVINAMYTGQWNVT 87
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVfsaMLIAILSAREN---IDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 88 NIHNL----------LTTLTIIIALTMKLGMTPFHFWIPE-----------VTQGVTLTAGMLLLTwqKLAPISIMLQIY 146
Cdd:PRK08676 192 ELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAayakapsvvsaLLSGTVLNIGIYGIL--RLSALLRQSGAA 269
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2267398310 147 PSMnTNILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYLM 210
Cdd:PRK08676 270 EQF-SNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
99-299 |
2.96e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 42.65 E-value: 2.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 99 IIALTMKLGMTPFHFWIPE-----------------VTQGVTLTAGMLLLTWQklapISIMLQIYPSMNTNILLTFALLS 161
Cdd:PRK12667 230 LWAFTIKAAIFPNHFWLPDahpaapspvsamlsglvVNVGAYAIIRFLYTIFG----ISPSLIDFRAALSPILIILGAVS 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 162 ALVGGWGGLNQTQLRKILAYSSIAHMGWMVAVLTFCPSLTILNLLIYL--------MLTITLFTMLNVNTSTTTLTLSIL 233
Cdd:PRK12667 306 AIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIinhaiaksLLFLASGVFIHAAGTRDIDELAGL 385
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398310 234 WNKNPTITLMILTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYS 299
Cdd:PRK12667 386 GRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYS 451
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
96-211 |
6.11e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 41.58 E-value: 6.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 96 LTIIIALTMKLGMTPFHFWIPEV-----TQGVTLTAGMLLltwqKLAP---ISIMLQIYPSMN---TNILLTFALLSALV 164
Cdd:MTH00217 210 LGFFLSLAIKIPKIPFHIWLPQAhveapVAGSVILAGVLL----KLGGygfIRFSWPLLPEASeyfSPLIQTLSLLAIIY 285
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2267398310 165 GGWGGLNQTQLRKILAYSSIAHMGwMVAVLTFCPSLTILNLLIYLML 211
Cdd:MTH00217 286 GSLTTCRQVDLKRIIAYSSVAHMG-LVTLGIFSHTIQGLVAAIFLML 331
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
47-297 |
1.50e-03 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 40.37 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 47 KTNPRSTEAATKYFLTQATASMLL----------------MMTIVINAMYTGQWNVTNIhnLLTTLTIIIALTMKLGMTP 110
Cdd:CHL00049 155 KKDVRSNEATMKYLLMGGASSSILvygfswlyglsggeieLQEIVNGLINTQMYNSPGI--SIALIFITVGIGFKLSLAP 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 111 FHFWIPEVTQG----------VTLTAGMLLLTwqklapISIMLQIYPSMNT---NILLTFALLSALVGGWGGLNQTQLRK 177
Cdd:CHL00049 233 FHQWTPDVYEGsptpvvaflsVTSKVAASALA------TRIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKR 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 178 ILAYSSIAHMGW-MVAVLTFCPSLTILNLLIYLMLTItlftMLNVNTSTTTLTLSI------------LWNKNPTITLMI 244
Cdd:CHL00049 307 MLAYSSIGQIGYvIIGIIVGDSNDGYASMITYMLFYI----FMNLGTFACIVLFGLrtgtdnirdyagLYTKDPFLALSL 382
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2267398310 245 LTSLLSLGGLPPLTGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLI 297
Cdd:CHL00049 383 ALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKII 435
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
85-191 |
2.97e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 39.31 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 85 NVTNIHNLLTTLTIIIALTMKLGMTPFHFWIP----EVTQGVTLTAGMLLLTWQKLAPISIMLQIYP---SMNTNILLTF 157
Cdd:PRK07363 198 NLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPdaytEASPAVAILLGGVLAKLGTYGLLRFGLQLFPqtwSLVAPGLAII 277
|
90 100 110
....*....|....*....|....*....|....
gi 2267398310 158 ALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMV 191
Cdd:PRK07363 278 GTISVIYGALSAIAQKDIKRMVAYSSIGHMGYIL 311
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
98-315 |
3.51e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 38.70 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 98 IIIALTMKLGMTPFHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYPSMNTNILLTFALLSALVggwgGLNQTQLRK 177
Cdd:MTH00091 63 QFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFFQ----MFLLKSYKN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 178 ILAYSSIAHMGWMvaVLTFCPSLTILNLLIYLMLTITLFTMLNvntstttltlsilWNKNPTITLMILTSLLSLGGLPPL 257
Cdd:MTH00091 139 LLILSSTESFNWL--ILSFFFSFFNVFFLFFYYFLLMLFLIPK-------------FNNVNKLNFVSWETLLVFMNLPFS 203
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398310 258 TGFLPKWVIVQELTKNNNITMAMIMVITALLNLYFYMRLIYSTSLTMFPTSNNMKMKW 315
Cdd:MTH00091 204 VTFFVKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFF 261
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-192 |
3.99e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 39.11 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 50 PRSTEAATKYFLTQATASMLLMMTIVINAMYTGQWNVTNIHNLLTTLTIIIALTM--KLGMTPFHFWIPE------VTQG 121
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAWLILIGFgvNAAFPPLHAWLPDaypeatVTGS 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 122 VTLTA---------------GMLLLTWqklapISIMLQIYPsmntnilLTFALLsalvggwgglnQTQLRKILAYSSIAH 186
Cdd:PRK12668 219 VFLSAfttktavyalarafpGTELLIY-----IGAAMAVYG-------VFFALL-----------ENDLRRLLSYHIVSQ 275
|
....*.
gi 2267398310 187 MGWMVA 192
Cdd:PRK12668 276 VGYMVA 281
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
13-191 |
4.42e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 38.76 E-value: 4.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 13 IFTGTML-TMISSHWLLIWMGLEMNMLAIIPILAKKTNPRSTEAATKYFL------TQATASMLLMM----TIVINAMYT 81
Cdd:PRK06458 116 LFLFTMLlALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYanaaTVMGDGEMA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 82 GQWNVTNIHN-----LLTTLTIIIALT---MKLGMTPFHFWIPE-----------VTQGVTLTAGMLLLTWQKlapISIM 142
Cdd:PRK06458 196 ILWTELLKHAslldpTLMKLAFVFLLIgfgTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRYY---ILID 272
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2267398310 143 LQIYPSMNTNILLTFALLSALVGGWGGLNQTQLRKILAYSSIAHMGWMV 191
Cdd:PRK06458 273 AAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIA 321
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-194 |
6.54e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 38.40 E-value: 6.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 111 FHFWIPEVTQGVTLTAGMLLLTWQKLAPISIMLQIYP-----SMNTNILLTFALLSALVGGWGGLNQTQLRKILAYSSIA 185
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPlfekaPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
....*....
gi 2267398310 186 HMGWMVAVL 194
Cdd:MTH00032 324 QLGYMVLII 332
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
96-211 |
7.78e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 37.98 E-value: 7.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398310 96 LTIIIALTMKLGMTPFHFWIPEV-----TQGVTLTAGmLLLTWQKLAPISIMLQIYPSMNTNI---LLTFALLSALVGGW 167
Cdd:MTH00226 234 LGIFLAMAVKIPIFPFHIWLPKAhveapVAGSVLLAG-ILLKLGGYGLVRLSWPILPLGAQNLapaVIAMGIVGIVYGSF 312
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2267398310 168 GGLNQTQLRKILAYSSIAHMGwMVAVLTFCPSLTILNLLIYLML 211
Cdd:MTH00226 313 ATCRQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIML 355
|
|
|