|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
1-226 |
8.90e-137 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 382.76 E-value: 8.90e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGIPIVILIIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIG 80
Cdd:MTH00101 1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 81 STNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRL 160
Cdd:MTH00101 81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398440 161 TANITAGHLLMHLIGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00101 161 TANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
19-225 |
4.45e-54 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 172.78 E-value: 4.45e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 19 IVILIIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQL 98
Cdd:TIGR01131 21 ILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 99 SMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAT 178
Cdd:TIGR01131 101 SFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLL 180
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2267398440 179 LVLTSISPttASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDN 225
Cdd:TIGR01131 181 FSLMSSAI--FALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
65-222 |
1.80e-41 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 138.30 E-value: 1.80e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 65 GRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVII 144
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398440 145 ETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTSISpttASITFTILILLTILEFAVALIQAYVFTLLVSLYL 222
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSV---GLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
19-223 |
1.94e-39 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 134.92 E-value: 1.94e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 19 IVILIIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLM-MMHSIKGRTWSLMLISLILFIGSTNLLGLL---PHSFTP 94
Cdd:pfam00119 7 VALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKdNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 95 TTQLSMNLGMAVPLWAAAVITGFR-HKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHL 173
Cdd:pfam00119 87 TADINVTLALALIVFLLVHYYGIKkHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLL 166
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2267398440 174 IGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLH 223
Cdd:pfam00119 167 LAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
64-224 |
1.32e-25 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 98.99 E-value: 1.32e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 64 KGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHK-TKMSLAHLLPQGTPvPLIPMLV 142
Cdd:COG0356 53 KGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLML 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 143 IIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTSispttASITFTILILLTILEFAVALIQAYVFTLLVSLYL 222
Cdd:COG0356 132 PIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLL-----GVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
|
..
gi 2267398440 223 HD 224
Cdd:COG0356 207 SL 208
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
1-226 |
8.90e-137 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 382.76 E-value: 8.90e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGIPIVILIIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIG 80
Cdd:MTH00101 1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 81 STNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRL 160
Cdd:MTH00101 81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398440 161 TANITAGHLLMHLIGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00101 161 TANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
7.83e-89 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 261.30 E-value: 7.83e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGIPIVILIIAVPSILFPSPT-RLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFI 79
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPKnRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 80 GSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVR 159
Cdd:MTH00120 81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398440 160 LTANITAGHLLMHLIGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
1.11e-86 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 255.95 E-value: 1.11e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGIPIVILIIAVPSILFPSPT-RLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFI 79
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTsRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 80 GSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVR 159
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398440 160 LTANITAGHLLMHLIGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDN 225
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
1.18e-86 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 255.66 E-value: 1.18e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGIPIVILIIAVPSILFPSPT-RLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFI 79
Cdd:MTH00073 1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTnKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 80 GSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVR 159
Cdd:MTH00073 81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398440 160 LTANITAGHLLMHLIGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00073 161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
6.81e-73 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 220.98 E-value: 6.81e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGIPIVILIIAVPSILFPSPT-RLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFI 79
Cdd:MTH00179 1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTnRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 80 GSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVR 159
Cdd:MTH00179 81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398440 160 LTANITAGHLLMHLIGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00179 161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
19-225 |
4.45e-54 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 172.78 E-value: 4.45e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 19 IVILIIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQL 98
Cdd:TIGR01131 21 ILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 99 SMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGAT 178
Cdd:TIGR01131 101 SFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLL 180
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2267398440 179 LVLTSISPttASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDN 225
Cdd:TIGR01131 181 FSLMSSAI--FALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
1-225 |
6.28e-52 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 167.46 E-value: 6.28e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGIPIVIL--IIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILF 78
Cdd:MTH00035 3 INNSIFGQFSPDTILFIPLTLLssVIALSWLFFINPTNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFIL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 79 IGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAV 158
Cdd:MTH00035 83 ILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGL 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398440 159 RLTANITAGHLLMHLIGGATLVLTSiSPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDN 225
Cdd:MTH00035 163 RLAANLTAGHLLIFLLSTAIWELSN-SPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQN 228
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-221 |
3.17e-50 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 163.03 E-value: 3.17e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGIPIVILIIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIG 80
Cdd:MTH00157 1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 81 STNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRL 160
Cdd:MTH00157 81 FNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRL 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267398440 161 TANITAGHLLMHLIGGatlVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLY 221
Cdd:MTH00157 161 AANMIAGHLLLTLLGN---TGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLY 218
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
65-222 |
1.80e-41 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 138.30 E-value: 1.80e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 65 GRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVII 144
Cdd:cd00310 1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398440 145 ETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTSISpttASITFTILILLTILEFAVALIQAYVFTLLVSLYL 222
Cdd:cd00310 81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSV---GLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYI 155
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
26-224 |
2.44e-41 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 140.39 E-value: 2.44e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 26 VPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMA 105
Cdd:MTH00173 29 MSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFSLA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 106 VPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGA-TLVLTSI 184
Cdd:MTH00173 109 LPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAGHIVLTLIGNYlSSSLFSS 188
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2267398440 185 SPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:MTH00173 189 SVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
1.74e-39 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 135.55 E-value: 1.74e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGIPIVILI---IAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLIL 77
Cdd:MTH00176 1 MLVDLFSSFDPPNKNIFSMISLSwitLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 78 FIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALA 157
Cdd:MTH00176 81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398440 158 VRLTANITAGHLLMHLIGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
19-223 |
1.94e-39 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 134.92 E-value: 1.94e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 19 IVILIIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLM-MMHSIKGRTWSLMLISLILFIGSTNLLGLL---PHSFTP 94
Cdd:pfam00119 7 VALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKdNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 95 TTQLSMNLGMAVPLWAAAVITGFR-HKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHL 173
Cdd:pfam00119 87 TADINVTLALALIVFLLVHYYGIKkHGLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLL 166
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2267398440 174 IGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLH 223
Cdd:pfam00119 167 LAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
1-224 |
8.72e-31 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 113.21 E-value: 8.72e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 1 MNENLFASFITPTIVGI---PIVILIIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLIL 77
Cdd:MTH00172 1 MSSSYFDQFNIVWLIGLtnsSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 78 FIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALA 157
Cdd:MTH00172 81 FIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLG 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398440 158 VRLTANITAGHLLMHLIGGATLVLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:MTH00172 161 VRLAANLSAGHLLFAILAGFGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLAD 227
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
40-226 |
8.79e-31 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 113.29 E-value: 8.79e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 40 NRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRH 119
Cdd:MTH00005 45 NRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTF 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 120 KTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTSISPTTASITFTILILL 199
Cdd:MTH00005 125 SPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIGIYAASALFSSISSTILLILTQMGY 204
|
170 180
....*....|....*....|....*..
gi 2267398440 200 TILEFAVALIQAYVFTLLVSLYLHDNT 226
Cdd:MTH00005 205 ILFEVGICLIQAYIFCLLLSLYSDDHP 231
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
19-224 |
7.69e-28 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 105.86 E-value: 7.69e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 19 IVILIIAVPSILFPSpTRLISNRLTSLQQwLIQLVLKQLMMMH-SIKGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQ 97
Cdd:MTH00175 34 MMVLAVIIFWLLLKG-DKLIPNRWQSIME-LIYLNIRSVVHDNlGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTAH 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 98 LSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLMHLIGGA 177
Cdd:MTH00175 112 IIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGF 191
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2267398440 178 TL-VLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:MTH00175 192 AFnMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGD 239
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
64-224 |
1.32e-25 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 98.99 E-value: 1.32e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 64 KGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHK-TKMSLAHLLPQGTPvPLIPMLV 142
Cdd:COG0356 53 KGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLML 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 143 IIETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTSispttASITFTILILLTILEFAVALIQAYVFTLLVSLYL 222
Cdd:COG0356 132 PIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLL-----GVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYI 206
|
..
gi 2267398440 223 HD 224
Cdd:COG0356 207 SL 208
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
10-224 |
2.29e-22 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 91.01 E-value: 2.29e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 10 ITPTIVGIPIVILIIAVPSILFPSPTRLISNRLTSLQQWLIQLVLKQLMMMHSIKGRTWSLMLISLILFIGSTNLLGLLP 89
Cdd:PRK05815 14 FDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIP 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 90 -HSFTPTTQLSMNLGMAVPLWAAAVITGFRHKtkmSLAHLLPQGTPVPlIPMLVIIETISLFIQPMALAVRLTANITAGH 168
Cdd:PRK05815 94 yLLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQP-HPLLLPIEIISEFSRPISLSLRLFGNMLAGE 169
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398440 169 LLMHLIGGatlvLTSISPTTASITFTILILLTILEFAVALIQAYVFTLLVSLYLHD 224
Cdd:PRK05815 170 LILALIAL----LGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISM 221
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
64-224 |
1.70e-20 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 86.53 E-value: 1.70e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 64 KGRTWSLMLISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVI 143
Cdd:MTH00174 86 KGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTI 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 144 IETISLFIQPMALAVRLTANITAGHLLMHLIGGATLVLTSISPTTAS-ITFTILILLTILEFAVALIQAYVFTLLVSLYL 222
Cdd:MTH00174 166 IETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSfVPFAILIFVTILEMAVAIIQAYVFTLLTIVYL 245
|
..
gi 2267398440 223 HD 224
Cdd:MTH00174 246 RD 247
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
72-222 |
4.92e-19 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 84.02 E-value: 4.92e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 72 LISLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFR-HKTKMSLAHLlPQGTPVPLIPMLVIIETISLF 150
Cdd:PRK13419 174 LLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKaHGIKGYLAHL-TGGTHWSLWIIMIPIEFIGLF 252
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398440 151 IQPMALAVRLTANITAGHL-LMHLIGGATLVLTSISPTTASITFTILILLtiLEFAVALIQAYVFTLLVSLYL 222
Cdd:PRK13419 253 TKPFALTVRLFANMTAGHIvILSLIFISFILKSYIVAVAVSVPFAIFIYL--LELFVAFLQAYIFTMLSALFI 323
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
71-222 |
2.32e-11 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 60.76 E-value: 2.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 71 MLISLILFigstNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSlaHLLPQGTPVPLIPM-LVIIETISL 149
Cdd:MTH00087 58 TFIVLLLF----CFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEKFS--VYLSKGSDSFLKTFsMLFVEIVSE 131
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2267398440 150 FIQPMALAVRLTANITAGHLLMHLIggatlvltsispTTASITFTILILLTIL-EFAVALIQAYVFTLLVSLYL 222
Cdd:MTH00087 132 LSRPLALTLRLTVNLMVGHLISSLL------------NFLGEKYVWLSILAIMmECFVAFIQSYIFSRLIYLYL 193
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
93-222 |
8.56e-10 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 57.59 E-value: 8.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 93 TPTTQLSMNLGMAVPLWAAAVITGFRHKTKMSLAHLLPQGTPVPLIPMLVIIETI-SLFIQPMALAVRLTANITAGHLLM 171
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2267398440 172 HLIGGATLVLTSISPTTASITFTILILltILEFAVALIQAYVFTLLVSLYL 222
Cdd:PRK13417 297 LALMGFIFQFQSWGIVPVSVIGSGLIY--VLEIFVAFLQAYIFVLLTSLFV 345
|
|
| PRK13420 |
PRK13420 |
F0F1 ATP synthase subunit A; Provisional |
74-222 |
7.08e-03 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237382 [Multi-domain] Cd Length: 226 Bit Score: 36.64 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398440 74 SLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAVPLWAAAVITGFRhkTKMSLAHLLPQGTPVPLipmLVIIETISLFIQP 153
Cdd:PRK13420 80 TLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIR--AEGLREYLKHYLSPSPF---LLPFHLISEITRT 154
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398440 154 MALAVRLTANITAghllMHLIGGATLVLTSispttasitFTILILLTILEFAVALIQAYVFTLLVSLYL 222
Cdd:PRK13420 155 LALAVRLFGNIMS----LELAALLVLLVAG---------FLVPVPILMLHIIEALVQAYIFGMLALIYI 210
|
|
|