|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 780.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 1 MLKIIVPTIMLFPVTWYSSNSKIWINTTLYSLMISFVGLSFLNQSNNNSNNFSLNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 81 QYHLKKEPWLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 161 LVALIHLQNTMGSLNLLTMNFWLKELPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 241 YGMMRITMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 321 LTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNM 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398556 401 LITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGPTF 459
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 625.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 1 MLKIIVPTIMLFPVTWYSSNSKIWINTTLYSLMISFVGLSFLNQSNNNSNNFSLNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 81 QYHLKKEPWLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 161 LVALIHLQNTMGSLNLLTMNFWLKELPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 241 YGMMRITMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 321 LTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNM 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398556 401 LITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGP 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 588.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 1 MLKIIVPTIMLFPVTWYSSNSKIWINTTLYSLMISFVGLSFLNQSNNNSNNFSLNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 81 QYHLKKEPWLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 161 LVALIHLQNTMGSLNLLTMNFWLKELPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 241 YGMMRITMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 321 LTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNM 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398556 401 LITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILG 456
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
5.52e-180 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 511.04 E-value: 5.52e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 1 MLKIIVPTIMLFPVTWYSSNSKIWINTTLYSLMISFVGLSFLNQSNNN-SNNFSLNFFSDPLSSPLLMLTMWLLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETgWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 80 SQYHLKKEPWLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 160 LLVALIHLQNTMGSLNLLTMNFWLKELPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 240 GYGMMRITMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 320 GLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLN 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398556 400 MLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTILGPT 458
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.24e-166 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 475.97 E-value: 2.24e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 3 KIIVPTIMLFPVTWYSSNSKIWINTTLYSLMI-SFVGLSFLNQSNNNSNNFSLNFFSDPLSSPLLMLTMWLLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIaLLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 82 YHLKKEPWLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 162 VALIHLQNTMGSLNLLTMNFwlkELPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYF---SKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 242 GMMRITMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 322 TSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNML 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2267398556 402 ITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
1.37e-151 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 438.64 E-value: 1.37e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 1 MLKIIVPTIMLFPVTWYSSNSKIWINTTLYSLMISFVGLSFLNQSNNNS-NNFSLNFFSDPLSSPLLMLTMWLLPLMIMA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSwHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 80 SQYHLKKEPWLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 160 LLVALIHLQNTMGSLNLLTMNFWLKELPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 240 GYGMMRITMALD-PTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGL 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2267398556 399 NMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTIL 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-451 |
6.22e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 352.53 E-value: 6.22e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 1 MLKIIVPTIMLFPVTWYSSNskiWINTTLYSLMISFVgLSFLNQSNNNSNNFSLNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNS---WWLVQSLLFLLSFL-FMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 81 QYHLKKEPWlrKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPL 160
Cdd:MTH00163 77 ESVYKKNNY--SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 161 LVALIHLQNTMGSLNLLTMNFwlkelpNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 241 YGMMRITMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 321 LTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNM 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2267398556 401 LITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNP 451
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKS 439
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
59-451 |
2.44e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 349.91 E-value: 2.44e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKEPWlrKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00150 23 DSMSSLLISLSLWISGLMMLASQKSVKLRNK--SSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWGY 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSWssnLLWTACIMAFMVKMPLYGFHLWLPK 218
Cdd:MTH00150 101 QPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKLPMYPFHLWLPK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVI 298
Cdd:MTH00150 178 AHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 299 VAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGE 378
Cdd:MTH00150 258 AGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSE 337
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398556 379 LFVMVATFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNP 451
Cdd:MTH00150 338 IMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKS 410
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-454 |
3.12e-106 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 322.85 E-value: 3.12e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 1 MLKIIVPTIMLFPVTWYSSNSkIWINTTLYSLMISFVGLSFLNQSNNNSNNFSLNFFSDPLSSPLLMLTMWLLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPW-SWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 81 Q--YHLKKEPwlrkKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSL 158
Cdd:MTH00014 80 FkiFQNNKAP----KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 159 PLLVALIHLQNTMGSLNLLTMNFWLkelPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKL 238
Cdd:MTH00014 156 PLLMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 239 GGYGMMRITMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
Cdd:MTH00014 233 GGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 319 HGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGL 398
Cdd:MTH00014 313 HGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAI 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398556 399 NMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTI 454
Cdd:MTH00014 393 TSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
21-454 |
3.80e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 322.31 E-value: 3.80e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 21 SKIWINTTLYSLMISFVGLSFLNQSNNNSNNFSLNFFSDPLSSPLLMLTMWLLPLMIMASQYHLKKEpwLRKKSYLSMLI 100
Cdd:MTH00205 18 FKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 101 SLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLnllTMN 180
Cdd:MTH00205 96 MLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSL---SMF 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 181 FWLKELPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYP 260
Cdd:MTH00205 173 FNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSEL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 261 FLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSR 340
Cdd:MTH00205 253 FFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSR 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 341 TMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNMLITALYSLYMLITTQRGKPT 420
Cdd:MTH00205 333 SMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVS 412
|
410 420 430
....*....|....*....|....*....|....
gi 2267398556 421 FHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTI 454
Cdd:MTH00205 413 SQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-458 |
2.74e-81 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 259.63 E-value: 2.74e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKepwlRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QtERLNAGLYFLFYTLIGSLPLLVALI--HLQNTMGSLNLLTmnfwLKELPNSWSS-NLLWTACIMAFMVKMPLYGFHLW 215
Cdd:COG1008 157 E-RRIYAAIKFFLYTLAGSLLMLVAILalYFLAGALTFDIAE----LAAAPLPLTAqLLLFLAFFIAFAVKVPMFPFHTW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 216 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDP-TTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:COG1008 232 LPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 295 ALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSIN 374
Cdd:COG1008 312 GFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSG 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 375 LIGELFVMVATFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTI 454
Cdd:COG1008 392 FVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPL 471
|
....
gi 2267398556 455 LGPT 458
Cdd:COG1008 472 LDLI 475
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
59-458 |
1.16e-74 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 242.15 E-value: 1.16e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKepwlRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QTeRLNAGLYFLFYTLIGSLPLLVALIHLQ-NTMGSLNLLTMNfwLKELPNSWSSnLLWTACIMAFMVKMPLYGFHLWLP 217
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELL--NLPLPFGVQT-WLFLAFFIAFAVKVPLFPLHTWLP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDP-TTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:TIGR01972 228 DAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 297 VIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLI 376
Cdd:TIGR01972 308 VLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFV 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 377 GELFVMVATFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTF-HTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTIL 455
Cdd:TIGR01972 388 GEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNpEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLL 467
|
...
gi 2267398556 456 GPT 458
Cdd:TIGR01972 468 DLT 470
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-458 |
2.29e-74 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 241.65 E-value: 2.29e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKepwlRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGn 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QTERLNAGLYFLFYTLIGSLPLLVALIHL----QNTMGSLNLLTmnfWLKELPNSWSSNLLWTACIMAFMVKMPLYGFHL 214
Cdd:PRK05846 156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIAD---LLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846 233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 294 MALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSI 373
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 374 NLIGELFVMVATFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKT 453
Cdd:PRK05846 393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKP 472
|
....*
gi 2267398556 454 ILGPT 458
Cdd:PRK05846 473 LLDVI 477
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
59-410 |
1.97e-68 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 225.70 E-value: 1.97e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00217 79 DGISIFFLILTALLTPICILISWNSIK----FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMnfWLKELPNSWSsNLLWTACIMAFMVKMPLYGFHLWLPK 218
Cdd:MTH00217 155 REEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQAL--CCLKIEKELQ-YFIFLGFFLSLAIKIPKIPFHIWLPQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:MTH00217 232 AHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLV 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIG 377
Cdd:MTH00217 312 TLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVG 391
|
330 340 350
....*....|....*....|....*....|...
gi 2267398556 378 ELFVMVATFSWSNISIILMGLNMLITALYSLYM 410
Cdd:MTH00217 392 EFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
59-410 |
1.93e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 223.40 E-value: 1.93e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00204 82 DGVSLFFILLTTLLIPICILISWKSIK----FLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTM-NFWLKELPNSWssnlLWTACIMAFMVKMPLYGFHLWLP 217
Cdd:MTH00204 158 REEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILlNIKLPLSIQKW----LLVGFFLSLAVKIPQIPFHIWLP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 218 KAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPF-LMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:MTH00204 234 QAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 297 VIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLI 376
Cdd:MTH00204 314 VPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFV 393
|
330 340 350
....*....|....*....|....*....|....
gi 2267398556 377 GELFVMVATFSWSNISIILMGLNMLITALYSLYM 410
Cdd:MTH00204 394 GEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
4.06e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 211.40 E-value: 4.06e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 112 ASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSWS 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 192 SNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLMLCLWGMIM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANS-NYERIHSRTMLLARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2267398556 351 LLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGL 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
59-419 |
8.40e-63 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 211.70 E-value: 8.40e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwLRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:MTH00226 101 DGISIYFIILTGFIVPCSILISWHSVK----YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMnFWLKELPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPK 218
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTL-ASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPK 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPT-TKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:MTH00226 256 AHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIG 377
Cdd:MTH00226 336 SITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIG 415
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2267398556 378 ELFVMVATFSWSNISIILMGLNMLITALYSLYMLITTQRGKP 419
Cdd:MTH00226 416 EYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAP 457
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
102-442 |
2.55e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 165.08 E-value: 2.55e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 102 LQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHlqntmgslNLLTMNF 181
Cdd:MTH00094 71 LILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 182 WLKELPNSWSSNLLwtaCIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTtksMAYPF 261
Cdd:MTH00094 143 CYFDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFW 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 262 LMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:MTH00094 217 IIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 342 MLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTF 421
Cdd:MTH00094 297 IYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFS 376
|
330 340
....*....|....*....|.
gi 2267398556 422 HTHNLNPSFTRENTLMSMHML 442
Cdd:MTH00094 377 NFNNFNVGLSLPLVFMMFNMF 397
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
2.06e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 159.43 E-value: 2.06e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASqYHLKKEPWLrkksYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12561 58 DGLSMPLVLLSGLITTLSIFAS-WKVTRKPRL----FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QtERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSWSSnLLWTACIMAFMVKMPLYGFHLWLPK 218
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALEL-LLYAGFLIAFGVKLPIFPLHTWLPD 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLM-LCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK12561 211 AHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAiLGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIG 377
Cdd:PRK12561 291 LLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2267398556 378 ELFVMVA-------TFSWSNISIILMGLNMLITALYSLYML 411
Cdd:PRK12561 371 ELTVFLGitssdvySSTFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
59-415 |
2.05e-41 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 152.61 E-value: 2.05e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKEPwlRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGT 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QtERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSWSSnLLWTACIMAFMVKMPLYGFHLWLPK 218
Cdd:COG0651 153 K-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLL-AAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLMLCLWG--MIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLGTLLLVLGLltMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 297 VIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLI 376
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2267398556 377 GELFVMVATFSWSN-ISIILMGLNMLITALYSLYMLITTQ 415
Cdd:COG0651 391 SKWLLLQAALEAGAwLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
59-411 |
2.33e-41 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 153.70 E-value: 2.33e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwlRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QtERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSwSSNLLWTACIMAFMVKMPLYGFHLWLPK 218
Cdd:PRK06473 153 Q-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFL-MLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:PRK06473 231 AHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 298 IVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGL---QTLLPLMATWWLLASLTNLALPPSIN 374
Cdd:PRK06473 311 LLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVG 390
|
330 340 350
....*....|....*....|....*....|....*..
gi 2267398556 375 LIGELFVMVATFSWSNISIILMGLNMLITALYSLYML 411
Cdd:PRK06473 391 FIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
110-411 |
7.32e-38 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 144.32 E-value: 7.32e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 110 FTASELILFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIhlqnTMG--SLNLLTMNFwlKELP 187
Cdd:CHL00011 129 FSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVL----GMGlyGSNEPTLNF--ETLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 188 N-SWSSNL---LWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLM 263
Cdd:CHL00011 202 NqSYPVALeilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLV 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 264 LC-LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIhsRTM 342
Cdd:CHL00011 282 IVgAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLV 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398556 343 LLAR--GLQTLLPLMATWWLLASLTNLALPPSINLIGELFV---MVATFSWSNISIIL----MGLNMLITALYSLYML 411
Cdd:CHL00011 360 YLDEmgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVffgIITSQKYLLMPKILitfvMAIGMILTPIYLLSML 437
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-411 |
1.82e-36 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 140.61 E-value: 1.82e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASqyhlkkepW---LRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITR 135
Cdd:PRK02546 86 DGLSMPLILLTGFITTLAVLAA--------WpvtFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAI 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 136 WGNQtERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSWSsNLLWTACIMAFMVKMPLYGFHLW 215
Cdd:PRK02546 158 WGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQ-LLCYAGLLIAYGVKLPIVPLHTW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 216 LPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFL-MLCLWGMIMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK02546 236 LPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRNLKRKIAYSSISHM 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 295 ALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSIN 374
Cdd:PRK02546 316 GFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSG 395
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2267398556 375 LIGELFVMVA-------TFSWSNISIILMGLNMLITALYSLYML 411
Cdd:PRK02546 396 FVAELMVFVGfatsdayTLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-451 |
6.65e-34 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 133.30 E-value: 6.65e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKkepwlRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QtERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSwSSNLLWTACIMAFMVKMPLYGFHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 219 AHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPflMLCLWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 296 LVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTL---LPLMATWWLLASLTNLALPPS 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398556 373 INLIGELFVMVATFSWSNISIILMGLNMLITALYSLYMLITTQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNP 451
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKIPALILTALILFLGVQP 467
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-406 |
4.31e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 98.41 E-value: 4.31e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 118 FYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLltmnfwlKELPNSWSSNLLWT 197
Cdd:PRK08375 131 LFVFLEIMSLSSYALVAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNM-------ADLAGALAENPTVV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 198 A----CIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMAL----DPTTKSMAYPFLMLCLWGM 269
Cdd:PRK08375 203 TafgfVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSM 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 270 IMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQ 349
Cdd:PRK08375 283 LVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLG 362
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398556 350 TLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFS-WSNISIILMGLNMLITALY 406
Cdd:PRK08375 363 RRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-408 |
4.50e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 98.89 E-value: 4.50e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKEPWLrkKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGN 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGP--EWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 139 QTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLN-----LLTMNFWLKELPNS-----WSSNLLWTACIMAFMVKMP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNmadlsAKIRGLSFPLTGGLagnppLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 209 LYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-------TMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 282 LKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2267398556 362 ASLTNLALPPSINLIGELFVMVATFSwsnISIILMGLNMLITALYSL 408
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLE---SGFYLPALVLLIASAISL 442
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
213-413 |
3.04e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 89.99 E-value: 3.04e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 213 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLMLC--LWGMIMTSSICLRQTDLKSLIAYSS 290
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIfgLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 291 VSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALP 370
Cdd:PRK06458 314 IEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMP 393
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2267398556 371 PSINLIGELFVMVATFSWSNISIILMGLNMLITALYSLYMLIT 413
Cdd:PRK06458 394 PFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVA 436
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
9.98e-18 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 78.34 E-value: 9.98e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 1 MLKIIVPTIMLFPVTWYSSNSKIWINTTLYSLMISFVGLSFLNQSNNNSNNFS-LNFFSDPLSSPLLMLTMWLLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLsYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2267398556 80 SQYHLKKEPWLRKKSYLSMLISLQMFLVMT 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
97-395 |
1.64e-17 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 84.20 E-value: 1.64e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 97 SMLISLQM-FLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLN 175
Cdd:MTH00062 74 RFFLFLSLiFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 176 LltmNFWLKELPNSWSSNLLwtaCIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTK 255
Cdd:MTH00062 154 F---SDWGSDDSVSLIVYYV---LSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 256 SMAYPFLMLCLWGMIMTSSICLrqtDLKSLIAYSSVSHMaLVIVAILIQTPWSFMGATALM-IAHGLTSSMLFCLANSNY 334
Cdd:MTH00062 228 LGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFY 303
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267398556 335 ERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIIL 395
Cdd:MTH00062 304 EVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
94-424 |
4.14e-15 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 77.50 E-value: 4.14e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 94 SYLSMLISLQMFLVMtftASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGS 173
Cdd:COG1009 115 AYLLLFMAAMLGLVL---SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 174 LNLLTMNFWLkelPNSWSSNLLWTACIMAF---MVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITMA 249
Cdd:COG1009 192 LNFSELLAAA---PTILSSPLLTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPL 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 250 LDPTtkSMAYPFLMLC-LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFC 328
Cdd:COG1009 268 FALS--PVWLTVVAIIgAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFL 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 329 LANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNML---ITAL 405
Cdd:COG1009 343 GAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAF 422
|
330
....*....|....*....
gi 2267398556 406 YSLYMLITTQRGKPTFHTH 424
Cdd:COG1009 423 YSFRLFFLVFFGKPRPKTP 441
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
94-405 |
9.71e-15 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 76.50 E-value: 9.71e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 94 SYLSMLISLQMFLVMtftASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGS 173
Cdd:PRK12647 99 SYILLFMASMLGLVL---SDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGT 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 174 LN---LLTMNFWLKElpNSWSSNLLWTACIMAFmVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRitma 249
Cdd:PRK12647 176 YSlseLLASGDVIRE--HPLYLAILLLVLGGAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR---- 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 250 LDPTTKSMAYPFLMLCLWG---MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSML 326
Cdd:PRK12647 248 LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGAL 327
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398556 327 FCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNMLITAL 405
Cdd:PRK12647 328 FMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNAL 406
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
90-327 |
1.36e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 75.80 E-value: 1.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 90 LRKKSYLSMLISLQMFLVM-TFTASELILFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFyTLIGSLPLLVALIHLQ 168
Cdd:PRK08668 94 TKNDAYFNMFALMSLAGVLgVFLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 169 NTMGSLNLLTM-NFWLKELPNSWSsnLLWTACIMAFMV-KMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMrI 246
Cdd:PRK08668 172 AKTGTFDFADIsQGLINDTSTGFA--LIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFL-L 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 247 TMALDPTTK------------SMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATA 314
Cdd:PRK08668 249 VLYVLPGTKlfsefgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLF 328
|
250
....*....|...
gi 2267398556 315 LMIAHGLTSSMLF 327
Cdd:PRK08668 329 HVFNHALFKGLFF 341
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
102-408 |
2.33e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 71.71 E-value: 2.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 102 LQMFLVMTFTASELILFYILFE-ATLIPTLIIITRwgNQTERLNAGLYFLFYTLIGSLPLLVALIHL-QNTMGSLNLLTM 179
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAElTTVFSAMLIAIL--SARENIDAALKYIFIASTAMIFAFIGLIFLfSLTRQALGTGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 180 NF-WLKELPNSWSSNLLWTACIM---AFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITmALDPTTK 255
Cdd:PRK08676 189 NWtELAAHASLLSPSVLGASFLFifiGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLS-ALLRQSG 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 256 SMAYPFLMLCLWGMIMTSSIC---LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANS 332
Cdd:PRK08676 268 AAEQFSNVLIGLGIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGI 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398556 333 NYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSnISIILMGLNMLITALYSL 408
Cdd:PRK08676 348 LHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGIS-VWLVLAVLLLLLLAASSF 422
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
91-386 |
4.61e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 71.30 E-value: 4.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 91 RKKSYLSMLISLQMF-LVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQN 169
Cdd:PRK08667 108 ERANLLSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFI 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 170 TMGSLNLLTMNFWLKELPnswssnLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMA 249
Cdd:PRK08667 188 QTGSFELSPLGASAGILS------LVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMD 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 250 LdpTTKSMAYPFLMLCLwGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALM---------- 316
Cdd:PRK08667 262 V--LSPELWWGVLILLA-GSIsalLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfh 338
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267398556 317 -IAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATF 386
Cdd:PRK08667 339 sLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
112-371 |
1.62e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 69.69 E-value: 1.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 112 ASELILFYILFEATLIPTLIIITRWGNQTErlNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMnfwlkELPNSWS 191
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI-----LHSDVWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 192 SNLLWTACI-----MAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITmaldPTTKSMAYPFLMLCL 266
Cdd:PRK12650 202 EKPGLTTVVavliaVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFS----PVFHDVAVWNWLLII 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 267 WGM---IMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTML 343
Cdd:PRK12650 278 VGMitaLMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIR 357
|
250 260
....*....|....*....|....*...
gi 2267398556 344 LARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK12650 358 RLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-384 |
8.27e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 66.92 E-value: 8.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 108 MTFTASELILFYILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELP 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 188 nSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTtKSMAYPFLMLCLW 267
Cdd:PRK12665 205 -SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPG-GGLDTLLMVVALL 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 268 GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARG 347
Cdd:PRK12665 283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGG 362
|
250 260 270
....*....|....*....|....*....|....*...
gi 2267398556 348 LQTLLPLMATWWLLASLtNLA-LPPSINLIGELFVMVA 384
Cdd:PRK12665 363 LAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEA 399
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-397 |
2.39e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 65.53 E-value: 2.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 119 YILFEATLIPTLIIITRwGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSWSSNLLWTA 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLF 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 199 CIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMA-----LDPTTKSMAYPFLMLCLWGMIMTS 273
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkanFVFTTLPFNNVFMILAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 274 SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLP 353
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMP 374
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2267398556 354 LMATWWLLASLTNLALPPSINLIGELFVMVATFS---WSNISIILMG 397
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKsnaWIGLVVLLVG 421
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
111-401 |
3.79e-11 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 65.00 E-value: 3.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 111 TASELILFYILFEATLIPTLIIITRWGNQtERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLltmnFWLKELPNSW 190
Cdd:PRK06525 131 YSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQTGTFAL----SALSGLHGSL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 191 SSnLLWTACIMAFMVKMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITMALDPTTKSMAYPFLMLCLWGM 269
Cdd:PRK06525 206 KY-LVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 270 IMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQ---TPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLAR 346
Cdd:PRK06525 284 LYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLR 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2267398556 347 GLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGLNML 401
Cdd:PRK06525 364 GVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVL 418
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-398 |
8.06e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 64.02 E-value: 8.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 104 MFLVMTFTASELIL------FYILFEATLIpTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLL 177
Cdd:PRK08377 113 LFLLLMLGATGMIAtgdifnLFVFMEITAI-TAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 178 TMNfWLKELPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI--TMALDPTTK 255
Cdd:PRK08377 192 HIA-QLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARIlyLMQNANGWS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 256 SMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYE 335
Cdd:PRK08377 271 SVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGI 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398556 336 RIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGL 398
Cdd:PRK08377 351 TLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVL 413
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
111-450 |
1.40e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 63.62 E-value: 1.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 111 TASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTmnfwLKELPNSW 190
Cdd:PRK12646 128 LSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITE----ILGQADHI 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 191 SSNLLWTACIMAFMV----KMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITMALDpTTKSMAYPFLMLC 265
Cdd:PRK12646 204 KNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVG 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 266 LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI-----LIQTPWSFMGATALMIA---------HGLTSSMLFCLAN 331
Cdd:PRK12646 282 LITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLfaalfhlmnHAIFKCALFMGVG 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 332 SNYERIHSRTMLLARGLQTLLPLMATWWLLASLTnLALPPSIN--LIGELFV--MVATFSWSNISIILMGLNMLI----- 402
Cdd:PRK12646 362 IIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMFLdaLTQTGQLSQFSLISMIIIVFIgvias 440
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2267398556 403 --TALYSLYMLITTQRGKptFHTHNLNPSFTRENTLMS------MHMLPLLFLTLN 450
Cdd:PRK12646 441 ifTFTYALYMVKEVFWGK--YDSKVFTKKNIHEPWLFSlpslilMVLVPVIFFVPN 494
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
95-411 |
3.16e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 62.14 E-value: 3.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 95 YLSMLISLQMFLVMTftaSELILFYILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPL-LVALIHLQNTMGS 173
Cdd:PRK06589 121 FFNLTILIGVLIALS---SDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGN 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 174 LNLLTMNFWlkelpnSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITM---AL 250
Cdd:PRK06589 197 LDFVSGGLF------SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLyifGL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 251 DPTTK--SMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFC 328
Cdd:PRK06589 271 SYLQRifAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFY 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 329 LANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNI--SIILMGLNMLITALY 406
Cdd:PRK06589 351 SMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPwlSIIVMLVVIASSILS 430
|
....*
gi 2267398556 407 SLYML 411
Cdd:PRK06589 431 ALYLL 435
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-398 |
5.16e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 61.12 E-value: 5.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 91 RKKSYLSM-LISLQMFLVMTFTASELILFYILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQN 169
Cdd:PRK07234 91 AKTRFFYAqLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 170 TMGSlnlltmnFWLKELPNSWSSNLlwTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMA 249
Cdd:PRK07234 170 ANGT-------FAFSGLATADPEAF--ALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 250 LDPTTKSMAYPFLMLCLWGmimtSSICLRQTDLKSLIAYSSVSHMALVIVAILIqtpwsfmgATALMIAHGLTSSMLFCL 329
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2267398556 330 ANSNYERIHSRTMLLARGLQTLLPLmatwwLLASLTNLALPPSINLIGELFVMVATFSWSNISIILMGL 398
Cdd:PRK07234 309 AGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAV 372
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
104-327 |
1.14e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 60.71 E-value: 1.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 104 MF-LVmtfTASELILFYILFEATLIPTLIIItrwGNQTERLN---AGLYFLFYTLIGSLPLLVALIHLQNTMGSlnlltm 179
Cdd:PRK12644 119 MFgLV---TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGT------ 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 180 nFWLKELP-NSWSSNLLWTA--CIMAFMV-KMPLYGFHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRITMALDpTT 254
Cdd:PRK12644 187 -YRLSELLaDPPTGPAVSVAvvLILVGALsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLAPGFA-DV 263
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398556 255 KSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12644 264 PVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
145-402 |
1.35e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 60.29 E-value: 1.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 145 AGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLltMNFWLKELPNSWSSNLLWTAcIMAFMVKMPLYGFHLWLPKAHVEAP 224
Cdd:PRK06521 165 AGFLYLLMAHAGALAILLAFGLLARESGSYDF--AAMRAAHLSPFWASLVFLLA-LFGFGAKAGLVPLHVWLPRAHPAAP 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 225 IAGSMVLAAVLLKLGGYGMMRITM-ALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVA--- 300
Cdd:PRK06521 242 SHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlgl 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 301 --ILIQTPWSFMGATALMIA------HGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPS 372
Cdd:PRK06521 322 amVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPL 401
|
250 260 270
....*....|....*....|....*....|
gi 2267398556 373 INLIGELFVMVATFSWSNISiiLMGLNMLI 402
Cdd:PRK06521 402 NGFVSEWLLLQSLLSSPGLP--QWGLKLAV 429
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
110-449 |
1.89e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 59.58 E-value: 1.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 110 FTASELILFYILFEATLIPTLIIITRWGNQTErLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNS 189
Cdd:PRK07691 125 FLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAG 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 190 wSSNLLWTACIMAFMV---KMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLM-LC 265
Cdd:PRK07691 204 -QTGLITVVAILFLFVfatKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILiLA 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 266 LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLA 345
Cdd:PRK07691 283 LLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKM 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 346 RGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSN-ISIILMGLNMLITaLYS-LYMLITTQRGKPTFHT 423
Cdd:PRK07691 363 GGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFyVSGIIVLLSSLLV-LYSvIKIFLKGFWGEPKGYD 441
|
330 340
....*....|....*....|....*.
gi 2267398556 424 HNLNPSFTRentlMSMHMLPLLFLTL 449
Cdd:PRK07691 442 LNNKVPVKK----LLLPAVVLVAITI 463
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-371 |
3.12e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 58.96 E-value: 3.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 75 LMIMASQYHLKKEPWLRKKSYLSMLISLQMFLVMTftASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTL 154
Cdd:PRK08376 105 LAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAI--TGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGS 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 155 IGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSWSSNLLwTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLaaV 234
Cdd:PRK08376 183 LASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIAL-ALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--L 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 235 LLKLGG-YGMMRITMAL-DPTTKSMAYPFLMLCL--WGMIMTSSICLRQTDLKSLIAYSSVS---HMAL---VIVAILIQ 304
Cdd:PRK08376 260 VIKQAGlYALARVLFSIyGPAINLATVGWVIIILgcLTMFVGVAMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAALGD 339
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2267398556 305 TPWSFMGATAL------MIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK08376 340 PAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
110-411 |
1.02e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 57.27 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 110 FTASELILFYILFEATLIPTLIIITrWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNS 189
Cdd:PRK12663 125 FLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDT 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 190 WSSNLLWTACIMAFMVKMPLYGFHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALDPTTKSMAYPFL--MLCLw 267
Cdd:PRK12663 204 ATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAI- 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 268 GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARG 347
Cdd:PRK12663 282 TMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGG 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2267398556 348 LQTLLPLMATWWLLASLTNLALPPSINLIGElfVMVATFSWSNISIILMGLnMLITALYSLYML 411
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPPFSGFWGK--VLLVQGALDNGAYILLAL-MLITSLITMYSL 422
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
95-455 |
1.32e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 53.80 E-value: 1.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 95 YLSMLISLQMFLVMTFTaSELILFYILFEATLIPTLIIITRWGNQTERLNAGL-YFLFYTLIGSLPLL-VALIHLQNtmG 172
Cdd:TIGR01770 105 YILLLFALLGIFLLVSS-NDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGLLLFgISLIYGFT--G 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 173 SLNLLTMNFWLKELPNSWSSNLLWTACIM-AFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITMALD 251
Cdd:TIGR01770 182 SLNFEDLLLFLSNGMLNISLLLLGIVLILvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 252 PTTKSMAYPFLMLC-LWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTS----SML 326
Cdd:TIGR01770 262 FGFSEAWQIFLAIIaFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVL 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 327 FCLANSNYERIHSrtMLLARGLQTLLPLMATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISI-ILMGLNMLITAL 405
Cdd:TIGR01770 342 SLLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLaVIAVLTSVIGAF 419
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2267398556 406 YSL----YMLITTQRGKPTFHTHNLNPSFtrentLMSMHMLPLLFLTLNPKTIL 455
Cdd:TIGR01770 420 YYLrvvkVMYFDKPERRIPSNPQSKAQSL-----LLSISALFILFLGLFPSLIL 468
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-393 |
2.07e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 53.42 E-value: 2.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 59 DPLSSPLLMLTMWLLPLMIMASQYHLKKEPWL-RKKSYLSMLISLQMFLVmtfTASELILFYILFEATLIPTLIIITRWG 137
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVpRFLCYLSLFTFLMMVLV---TSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 138 NQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMN---FWLKELPNSWSSNLLWTACIMAFMV--------- 205
Cdd:MTH00032 156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligc 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 206 --KMPLYGFHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRITmaldPTTKSMAYPFLMLCLWGMI---MTSSICLRQT 280
Cdd:MTH00032 236 igKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 281 DLKSLIAYSSVSHMALVIVAILIQTpwSFMGATALMIAHGLTSSMLFCLANSnyeRIHSRT-----MLLARGLQTLLPLM 355
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGS---VIHSTTvdeqdMRKMGGLIHSIPFT 386
|
330 340 350
....*....|....*....|....*....|....*...
gi 2267398556 356 ATWWLLASLTNLALPPSINLIGELFVMVATFSWSNISI 393
Cdd:MTH00032 387 YTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
80-408 |
2.49e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 53.05 E-value: 2.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 80 SQYHLKKEPwlRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00208 127 SHYYMSNDP--NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIG 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 160 LLVALihlqntmgSLNLLTMNFW-LKEL-----PNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAhVEAPIAGS----- 228
Cdd:MTH00208 205 IILFL--------SLSLINFNSWnLNEIlslnnSNSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhs 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 229 --MVLAAVLLklggygMMRITMALDPTTKsmaypFLMLCLW----GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAIL 302
Cdd:MTH00208 276 stMVVAGVFL------LIRTSPLISNSPW-----FLSLCLIlgslTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIG 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 303 IQTPWsfmgaTAL--MIAHGLTSSMLFCLANSnyeRIHS-------RTMllaRGLQTLLPLMATWWLLASLTNLALP--- 370
Cdd:MTH00208 345 LNQPN-----LALfhICTHAFFKAMLFLCSGS---IIHSlnneqdlRKM---GGLSFLLPVTSSCIILGSLALMGTPfla 413
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2267398556 371 --PSINLIGELfvmvATFSWSN-ISIILMGLNMLITALYSL 408
Cdd:MTH00208 414 gfYSKDLILEA----GLASISNlLSIILALIATLLTAVYSF 450
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-327 |
1.38e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 50.66 E-value: 1.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 136 WGNQTER-LNAGL-YFLFYTLIGSLPLLVALIHLQNTmGSLNLLTMNfwlkelpnswSSNLLWTACIM-AFMVKMPLYGF 212
Cdd:PRK12668 134 WARGTKAaVRAGFrYLLVHVLGGVLLLAGILLHYAET-GSFAFGAIA----------GLGGTAAWLILiGFGVNAAFPPL 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 213 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRitmaldpttksmAYPFLMLCLW-GMIMT---SSICLRQTDLKSLIAY 288
Cdd:PRK12668 203 HAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR------------AFPGTELLIYiGAAMAvygVFFALLENDLRRLLSY 270
|
170 180 190
....*....|....*....|....*....|....*....
gi 2267398556 289 SSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:PRK12668 271 HIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
75-323 |
1.67e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.11 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 75 LMIMASQYHLKKEPWLRKKSYLSMLISL--QMFLVMtftASELILFYILFEATLIPTLIIITRWGNQTERLNAGL-YFLF 151
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATlgMMLMAS---ANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 152 YTLIGSLPLL-VALIHLqnTMGSLNLLTMNFWLKELPNSwsSNLLWTACIM---AFMVKMPLYGFHLWLPKAHVEAPIAG 227
Cdd:COG1007 162 GALSSGFLLYgISLLYG--ATGSLNLAGIAAALAAGGAN--SPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPV 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 228 SMVLAAVLlKLGGYGM-MRITM-ALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQT 305
Cdd:COG1007 238 TAFLATAP-KIAAFAAlLRLLVeAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGT 316
|
250
....*....|....*...
gi 2267398556 306 PWSFMGATALMIAHGLTS 323
Cdd:COG1007 317 PLGVSAALFYLLAYLFMN 334
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-390 |
1.99e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 50.21 E-value: 1.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 155 IGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPnswSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAV 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 235 LLKLGGYGMMRITMAldpttkSMAYPF---LMLCLWGMImTSSI----CLRQTDLKSLIAYSSVSHMALV-------IVA 300
Cdd:PRK08042 222 VMKIGLLGILTLSLL------GGNAPLwwgVALLVLGMI-TAFVgglyALMEHNIQRLLAYHTLENIGIIllglgagVTG 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 301 ILIQTP----WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPPSINLI 376
Cdd:PRK08042 295 IALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFA 374
|
250
....*....|....
gi 2267398556 377 GELFVMVATFSWSN 390
Cdd:PRK08042 375 GEWVIYQSFFKLSN 388
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-371 |
3.52e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.44 E-value: 3.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 75 LMIMASQYHLKKEPWLRKKSYLsmLISLQMFLVMTFTASELILFyILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTL 154
Cdd:PRK12649 96 IMSYSNGYMSHKEDLPRYYQYL--LLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 155 IGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSWSSNLLWTACIMAFM---VKMPLYGFHLWLPKAhVEAPIAGSMVL 231
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFL 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 232 -AAVLLKLGGYGMMRItmalDPTTKSMAYPFLMLCLWGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTP- 306
Cdd:PRK12649 252 hSATMVKAGVYLVARI----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYh 327
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398556 307 ---WSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMLLARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK12649 328 epgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
91-408 |
5.00e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 48.92 E-value: 5.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 91 RKKSYLSMLISLQMFLVmtfTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNT 170
Cdd:MTH00020 112 RFMSYLSLFTFLMVVLV---TSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDR 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 171 MGSLNLLTMnfwLKELPNSWSSNLLWTaCIMAF---MVKMPLYGFHLWLPKAH-----VEAPI-AGSMVLAAVLLklggy 241
Cdd:MTH00020 189 FGSLDFSSV---FNMVVSAPSSDITLI-CLFLFigaVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL----- 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 242 gMMRITMALDpttksmaYPFLMLCLWGMI------MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATAL 315
Cdd:MTH00020 260 -LIRSSPLFE-------QAPLALIIVTIVgsltvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFH 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 316 MIAHGLTSSMLFCLANSnyeRIHS----RTMLLARGLQTLLPLMATWWLLASLTNLALP-----PSINLIGELfvmvATF 386
Cdd:MTH00020 329 LMNHAFFKALLFLSAGS---VIHAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPyltgfYSKDLILEL----AFG 401
|
330 340
....*....|....*....|...
gi 2267398556 387 SWSNISIILMG-LNMLITALYSL 408
Cdd:MTH00020 402 QYYLIFAYWLGcFSALLTAFYSI 424
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
91-405 |
7.59e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 45.17 E-value: 7.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 91 RKKSYLSMLISLQMF-LVMTFTASELILFYILFEATLIPTLIIITRWGNQTErlnAGLYFLFYTLIGSLPLLVALIHLQN 169
Cdd:PRK06459 69 HYGKWLSSLYILTILgMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKR---PAFVFMAFGELSTVLILAGFAWAFI 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 170 TMGSLNLltmnfwlkelpNSWSSNLLWTACIMAFMVKMPLYGFHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIT 247
Cdd:PRK06459 146 ISGTTNF-----------SYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMT 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 248 MALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTD-LKSLIAYSSVSHMALVIVAI--------LIQTPWSFMGATALM-- 316
Cdd:PRK06459 215 ILTQTIPIGYFGLTILAIGAFSILFGALYAYVSEnVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILys 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 317 IAHGLTSSMLFC------------LANSNYERIHSRTMLLARGLQTLLPL---MATWWLLASLTNLALpPSINLIGELFV 381
Cdd:PRK06459 295 FAHSVAKTGLFLssglqekqsitySKKIRNRWIELGLTLLASSLSGLLPNiggVASWLLLESLFMFAY-VLHNVISILFI 373
|
330 340
....*....|....*....|....
gi 2267398556 382 MVAtfswsniSIILMGLNMLITAL 405
Cdd:PRK06459 374 VTG-------AIIAMGEGLATALL 390
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
112-327 |
9.99e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 44.25 E-value: 9.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 112 ASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSWS 191
Cdd:MTH00196 12 SSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNSGQSFSS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 192 SNLLWTAC--IMAFMVKMPLYGFHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMMRITMALDPTTKSmaypFLMLCLWGM 269
Cdd:MTH00196 92 VSVPIGYLliIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNI----LLIGGLFSL 163
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2267398556 270 IMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLF 327
Cdd:MTH00196 164 FVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
212-323 |
1.02e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.43 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 212 FHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRI-TMALDPTTKSMAYPFLMLCLWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:PRK05777 223 FHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLlVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
90 100 110
....*....|....*....|....*....|....
gi 2267398556 290 SVSHMALVIVAILIQTPWSFMGATALMIAHGLTS 323
Cdd:PRK05777 302 SIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-330 |
5.36e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 42.14 E-value: 5.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 137 GNQTERLNAGLYFLFYTLIGSLPLLVALIHLQNTMGSLNLLTMNFWLKELPNSwSSNLLWTACIM---AFMVKMPLYGFH 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAA-DRALLEAGAALllvVFLIKAAMWPLN 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 214 LWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRITMALDPTTKSMAYPFLMLCLWGMIMTSSIC-----LRQTDLKSLI 286
Cdd:PRK12666 231 FWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigvLAAQRLRRLA 307
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2267398556 287 AYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLA 330
Cdd:PRK12666 308 AYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
80-301 |
8.72e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 41.86 E-value: 8.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 80 SQYHLKKEPwlRKKSYLSMLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLP 159
Cdd:MTH00211 99 SLWYMSSEP--NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 160 LLVALIHLqntMGSLNLLTMNFWLKELPNSWSSNLLwtaCIMAFMVKMPLYGFHLWLPKAhVEAPIAGS-------MVLA 232
Cdd:MTH00211 177 LLLSMVWL---LLNLNSWEISQLFILNLDLTLFLLG---LLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVA 249
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2267398556 233 AVLLklggygMMRITMALDPTTKSMAypfLMLCLWG--MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI 301
Cdd:MTH00211 250 GVFL------LIRLSPLFQNNQLILG---AVLLLGAltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL 311
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
262-371 |
3.23e-03 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 39.63 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 262 LMLCLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110
....*....|....*....|....*....|
gi 2267398556 342 MLLARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
98-455 |
7.82e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 38.41 E-value: 7.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 98 MLISLQMFLVMTFTASELILFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSLPLLVALihlqntmgsLNLL 177
Cdd:MTH00200 9 FILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGL---------LNAW 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 178 TMNFWLkelPNSWSSNLLWTACIMAFMVKMPLYGFHLWLPKAHVEAPIAGSMVLAAVLlKLGGYgMMRITMALDPTTKSM 257
Cdd:MTH00200 80 TSGQWG---ISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAPF-ALLIQLAPALNSNIL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 258 AYPFLMLCLWGMIMTssicLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSFMGATALMIAHGLTSSMLFCLANSNYERI 337
Cdd:MTH00200 155 LLLGLLSVLVGGWGG----LNQTQLRKILAYSSIAHLGWLLSGLVYS---PNLALLYLLLYVIITLTVFLLLNLLNSTKI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267398556 338 HSRTMLLarglqTLLPLMATWWLLASLTNLALPPSINLIGELFVMVA----TFSWSNISIILMGLNMLITALYSLYMLIT 413
Cdd:MTH00200 228 NSLSSSK-----TKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQElskqGLFIYATILLLGSLLSLFFYLRLSYLTLL 302
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2267398556 414 TQRGKPTFHTHNLNPSFTRENTLMSMHMLPLLFLTLNPKTIL 455
Cdd:MTH00200 303 TLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLF 344
|
|
| |
