|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-311 |
7.86e-161 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 451.97 E-value: 7.86e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDI 80
Cdd:MTH00112 7 LIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 81 TQLNHPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNSTLLTIMAILSTALGG 160
Cdd:MTH00112 87 TQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILSTLIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 161 WMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLMM 240
Cdd:MTH00112 167 WGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLML 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2319130520 241 TLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTITLPPNPTNHMKQWHI 311
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRT 317
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
2-312 |
1.79e-128 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 369.90 E-value: 1.79e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 2 IFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDIT 81
Cdd:MTH00135 8 ILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 82 QLNHPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSlNSTLLTIMAILSTALGGW 161
Cdd:MTH00135 88 QMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLTSTLVGGW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 162 MGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLMMT 241
Cdd:MTH00135 167 GGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLI 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2319130520 242 LLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTITLPPNPTNHMKQWHIH 312
Cdd:MTH00135 247 LLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLP 317
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
2-310 |
3.29e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 366.55 E-value: 3.29e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 2 IFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDIT 81
Cdd:MTH00070 8 ILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIM 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 82 QLNHPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNSTLLTIMAILSTALGGW 161
Cdd:MTH00070 88 NMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGGW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 162 MGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLMMT 241
Cdd:MTH00070 168 GGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLT 247
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2319130520 242 LLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTITLPPNPTNHMKQWH 310
Cdd:MTH00070 248 LLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWR 316
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-310 |
8.12e-115 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 335.28 E-value: 8.12e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDI 80
Cdd:MTH00105 7 IIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 81 TQLNHPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNSTLLTIMAILSTALGG 160
Cdd:MTH00105 87 TKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSILIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 161 WMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLMM 240
Cdd:MTH00105 167 WGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILL 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 241 TLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTITLPPNPTNHMKQWH 310
Cdd:MTH00105 247 TLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQ 316
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-309 |
1.11e-93 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 281.47 E-value: 1.11e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDI 80
Cdd:MTH00200 7 PLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 81 TQLNHPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNSTLLTIMAILSTALGG 160
Cdd:MTH00200 87 SEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 161 WMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLMM 240
Cdd:MTH00200 167 WGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGL 246
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2319130520 241 TLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTITLPPNPTNHMKQW 309
Cdd:MTH00200 247 TLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSW 315
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-301 |
1.36e-88 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 268.72 E-value: 1.36e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDI 80
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 81 TQLNHPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNSTLLTIMAILSTALGG 160
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 161 WMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLMM 240
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2319130520 241 TLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTITLPPN 301
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQ 307
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-307 |
7.18e-62 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 199.66 E-value: 7.18e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGqwdi 80
Cdd:MTH00160 8 LLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM---- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 81 tqLNHPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILfltSHSLNSTLLTIMAILSTALGG 160
Cdd:MTH00160 84 --LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIILSAIIGA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 161 WMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLMM 240
Cdd:MTH00160 159 IGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFL 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2319130520 241 TLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTITLPPNPTNHMK 307
Cdd:MTH00160 239 NLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLK 305
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-296 |
2.66e-54 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 179.70 E-value: 2.66e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDI 80
Cdd:MTH00144 7 LLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 81 TqlnhpiscALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPI-TILFLTSHSLNSTLLTIMAILSTALG 159
Cdd:MTH00144 87 M--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLfLLSNFLDLYWLAYLLCVISVLSALVG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 160 GWMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNtTKTLKLSTMMISWTKAPTLNATLM 239
Cdd:MTH00144 159 SIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLW-SGDSGSMKDLGSLKPSYKTGLSII 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2319130520 240 MTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTI 296
Cdd:MTH00144 238 SLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-299 |
1.73e-50 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 169.96 E-value: 1.73e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDI 80
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLLKN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 81 tqlnhpISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNSTLLTIMAILSTALGG 160
Cdd:MTH00011 89 ------ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 161 WMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLMM 240
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2319130520 241 TLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTITLP 299
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSP 301
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
2-296 |
8.82e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 147.13 E-value: 8.82e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 2 IFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSStinawSSGQWDIT 81
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGG-----SLSFSNLY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 82 QlnHPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHslNSTLLTIMAILSTALGGW 161
Cdd:MTH00197 77 L--SLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 162 MGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMYCLMTVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLMMT 241
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2319130520 242 LLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTI 296
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-293 |
3.40e-40 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 146.03 E-value: 3.40e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 8 LLGTTIVISSNHWMAIWTGLEINTLAIIPLIS-KYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLNHP 86
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 87 IS------------CALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK---FPPITILFLTSHSLNS----TL 147
Cdd:COG1007 192 LAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAALLRLLVEAFPGLAadwqLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 148 LTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTL--LTFYM--YCLMTVTVFLTLNTTKTLKLST 223
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLSRKGGEA 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2319130520 224 MMIS-----WTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYY 293
Cdd:COG1007 352 EEIEdlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVKA 426
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-293 |
3.51e-35 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 132.64 E-value: 3.51e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 8 LLGTTIVISSNHWMAIWTGLEINTLAIIPLIS-KYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLNHP 86
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 87 IS------------CALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK---FPPIT----ILFLTSHSLNSTL 147
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrllvVAFGGLSEDWQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 148 LTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTL--LTFYM--YCLMTVTVF--LTLNTTKTLKL 221
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2319130520 222 STM----MISWTKaPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYY 293
Cdd:PRK05777 353 ESIsdfaGLSKRS-PLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKL 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
7-290 |
3.64e-33 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 125.14 E-value: 3.64e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 7 LLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHP-RAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLN- 84
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINl 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 85 ------------HPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFltSHSLNSTLLTIMA 152
Cdd:MTH00196 82 vlnsgqsfssvsVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 153 ILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIL----IYNPKLTLLTFYMYCLMTVTVF---LTLNTTKTLKLSTMM 225
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFsiiLALNVYKNLIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2319130520 226 ISwTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRL 290
Cdd:MTH00196 240 LS-RRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-291 |
2.33e-30 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 119.28 E-value: 2.33e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 8 LLGTTIVISSNHWMAIWTGLEINTLAIIPLIS-KYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLNHP 86
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 87 ------------ISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK---FPPITILFLTS----HSLNSTL 147
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYIlfgfSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 148 LTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTL--LTFY--MYCLMTVTVFLTL------NTTK 217
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLsllrsyKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2319130520 218 TLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLA 291
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
7-290 |
1.14e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 117.43 E-value: 1.14e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 7 LLLGTTIVISSNHWMAIWTGLEINTLAIIPLIS-KYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLNH 85
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGINS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 86 ----PISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNSTLltIMAILSTALGGW 161
Cdd:MTH00199 186 iltgDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVL--ICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 162 MGLNQTQIRKILAFSSISHLGWMTIILIYNP----KLTLLTFYMYCLMTVTVF---LTLNTTKTLKLSTMMISwTKAPTL 234
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2319130520 235 NATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRL 290
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
17-262 |
8.93e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 109.33 E-value: 8.93e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 17 SNHWMAIWTGLEINTLAIIPLI-SKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQL-----------N 84
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 85 HPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK----FPPITILFLTSHSLN--STLLTIMAILSTAL 158
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVkaggYGLIRRSLLYLPSSPfiQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 159 GGWMGLNQTQIRKILAFSSISHLGWMTIIL----IYNPKLTLLTFYMYCLMTVTVFL-----TLNTTKTLKLSTMMISWT 229
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 2319130520 230 KAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQ 262
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
3-290 |
5.04e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 104.07 E-value: 5.04e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 3 FTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQ 82
Cdd:COG0651 112 LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 83 LNHPIS----------CALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK--------------FPPITILFL 138
Cdd:COG0651 192 LAARLAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTkvgvyailrvltllFGADPALFL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 139 tshslnSTLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTI-ILIYNPK-LTLLTFYM--YCLMTVTVFLT-- 212
Cdd:COG0651 272 ------GTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLgLAGALFHLlnHALAKALLFLAag 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 213 --LNTTKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRL 290
Cdd:COG0651 346 aiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-290 |
5.96e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 93.00 E-value: 5.96e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 9 LGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAI---------EAAIKYFLVQAAASTLLLFS------------ 67
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGcalyfgftgneg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 68 --STINAWSSGQWDITQLNHPISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFppITILFLTSHSLNS 145
Cdd:MTH00198 279 mlGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 146 TLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIL-------IYNPKLTLLTFYMYCLMTVTVFLTL----- 213
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVsagtyesLQASWTYAVTYLVSALASFTVICTLeefgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 214 -------------NTTKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILS 280
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 2319130520 281 LLGL-------FFYLRL 290
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-257 |
4.18e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 87.37 E-value: 4.18e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLiSKYHHP--RAIEAAIKYFLVQAAASTLLLFS-STINAWSSGQ 77
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLL-SGYTKKdvRSNEATMKYLLMGGASSSILVYGfSWLYGLSGGE 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 78 WDI---------TQLNHPISC----ALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPP-------ITILF 137
Cdd:CHL00049 193 IELqeivnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAAsalatriFDIPF 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 138 LTSHSLNSTLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIILI-------YNPKLTLLTFYMycLMTVTVF 210
Cdd:CHL00049 273 YFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsndgYASMITYMLFYI--FMNLGTF 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2319130520 211 LTLnTTKTLKLSTMMI-----SWTKAPTLNATLMMTLLSLAGLPPLTGFLPK 257
Cdd:CHL00049 351 ACI-VLFGLRTGTDNIrdyagLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
44-257 |
4.33e-18 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 84.33 E-value: 4.33e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 44 PRAIEAAIKYFLVQAAASTLLLF-SSTINAWSSGQwdiTQLnHPISCALLTTA--------------IAMKLGLVPFHFW 108
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQL-SAIALALITSPslglalalvfviagIAFKISAVPFHQW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 109 FPEVLQGSSLTTAMLLSTVMK---FPPITILFLTSHSLNST----LLTIMAILSTALGGWMGLNQTQIRKILAFSSISHL 181
Cdd:PRK02504 233 TPDVYEGSPTPVVAFLSVGSKaagFALAIRLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQA 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 182 GWMTIILIYNPK--LTLLTFYM--YCLMTVTVFLTLnTTKTLKLSTMMIS-----WTKAPTLNATLMMTLLSLAGLPPLT 252
Cdd:PRK02504 313 GFVMIGLVAGTEagYASMVFYLlaYLFMNLGAFACV-ILFSLRTGTDQISdyaglYQKDPLLTLGLSLCLLSLGGIPPLA 391
|
....*
gi 2319130520 253 GFLPK 257
Cdd:PRK02504 392 GFFGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
32-286 |
1.95e-14 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 73.58 E-value: 1.95e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 32 LAIIP---LISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQW--DITQL-NHPIS-------CALLTTAIAM 98
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELaAAPLPltaqlllFLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 99 KLGLVPFHFWFPEVLQGSSLTTAMLLSTVMK--------------FPPITILFltshslnSTLLTIMAILSTALGGWMGL 164
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLkmggygllrfalplFPEASAYF-------APLLAALGVIGIIYGALVAL 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 165 NQTQIRKILAFSSISHLGWMTI-ILIYNPK-LTLLTFYM--YCLMTVTVFLTL----NTTKTLKLSTMMISWTKAPTLNA 236
Cdd:COG1008 295 AQTDLKRLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQMvsHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAA 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2319130520 237 TLMMTLLSLAGLPPLTGFLPKWLTIQELTKqemttTAMIIAILSLLGLFF 286
Cdd:COG1008 375 LFLLAALASLGLPGTSGFVGEFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-305 |
5.88e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 69.14 E-value: 5.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 27 LEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQL------NHPISCA--LLTTAIAM 98
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalaeNPTVVTAfgFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 99 KLGLVPFHFWFPEVLQG-SSLTTAMLLSTVMK---FPPITILF------LTSHSLNSTLLTIMAILSTALGGWMGLNQTQ 168
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKvavYALIRIYFtvfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 169 IRKILAFSSISHLGWMTIILIYNPKLTLL--TFYM--YCLMTVTVFLTLN----TTKTLKLSTMMISWTKAPTLNATLMM 240
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2319130520 241 TLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYSTITLPPNPTNH 305
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA 439
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-302 |
1.35e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 67.81 E-value: 1.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 27 LEINTLAIIPLISkYHHPR--AIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLNHPIS----------CALLTT 94
Cdd:PRK08376 150 LEIMSIASYALVA-FRNDTweAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSenptvvakiaLALFIA 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 95 AIAMKLGLVPFHFWFPEVLQG--SSLTTAMLLSTVMKFPPIT-ILF-LTSHSLNST----LLTIMAILSTALGGWMGLNQ 166
Cdd:PRK08376 229 GLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALArVLFsIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 167 TQIRKILAFSSISHLGWM------TIILIYNPKLT----------LLTFYMYCLMTVTVFLT----LNTTKTLKLSTMMI 226
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMllglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTagavIYETGTRNLNELGG 388
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2319130520 227 SWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLtIQELTKQEMTTTAMIIAILSLLGLFFYLRlAYYSTITLPPNP 302
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASKWL-IYESSALFNPILGVIAMIGSVLTLASFVK-VFHTAFFGPPSE 462
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
37-282 |
3.62e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 66.50 E-value: 3.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 37 LISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQ-WDITQL-NHPISCALLT-------TAIAMKLGLVPFHF 107
Cdd:TIGR01972 145 LIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHT 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 108 WFPEV-LQGSSLTTAMLLSTVMKFPPITI------LFLTSHSLNSTLLTIMAILSTALGGWMGLNQTQIRKILAFSSISH 180
Cdd:TIGR01972 225 WLPDAhVEAPTAGSVILAGVLLKMGTYGFlrfnlpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 181 LGWMTIILIYNPKLTLL--TFYMYC--LMTVTVFLTLNT----TKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLT 252
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
250 260 270
....*....|....*....|....*....|
gi 2319130520 253 GFLPKWLTIQELTKqeMTTTAMIIAILSLL 282
Cdd:TIGR01972 385 GFVGEFLILLGSFK--VNPVVAFLAALGIV 412
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
3-292 |
3.47e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 63.86 E-value: 3.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 3 FTMSLLLGTTIVISSNHWMAIWTGLEINTLA---IIPLISKYhhprAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWD 79
Cdd:PRK08668 103 FALMSLAGVLGVFLANDLLTLYIFWEIMTFSsfmMVPMGKKE----SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFD 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 80 ITQLNHPISCA-----------LLTTAIAMKLGLVPFHFWFPE-----------VLQGS-SLTTAMLLSTVMKFPPITIL 136
Cdd:PRK08668 179 FADISQGLINDtstgfalivflFLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 137 FLT-----SHSLNSTLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWmtiILIYNPKLTLLTF-------YMYCL 204
Cdd:PRK08668 259 FSEfgtyrGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGY---ILVGLGLGTSLGFagglfhvFNHAL 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 205 MTVTVFLTLNT----TKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILS 280
Cdd:PRK08668 336 FKGLFFLIFAAviyrTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGS 415
|
330
....*....|..
gi 2319130520 281 LLGLFFYLRLAY 292
Cdd:PRK08668 416 IGSFLYVFRPLA 427
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-285 |
1.60e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 61.48 E-value: 1.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLllgttiVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLV------QAAASTLLLFSSTINAWS 74
Cdd:PRK06458 117 FLFTMLL------ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANAATVMG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 75 SGQ----W-DITQLNHPISCALLTTAIAM-------KLGLVPFHFWFPEV-LQGSSLTTAML--------LSTVMKFPPI 133
Cdd:PRK06458 191 DGEmailWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAhSEAPSPVSALLsgvllnvaLYAVLRYYIL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 134 TILFLTSHSLNsTLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYNPKL----TLLTFYMYCLMTVTV 209
Cdd:PRK06458 271 IDAAIGSDFPG-RLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAI 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 210 FLT----LNTTKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMtttaMIIAILSLLGLF 285
Cdd:PRK06458 350 FFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGP----LLIAILLLLLLT 425
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-295 |
3.52e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 60.55 E-value: 3.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 1 LIFTMSLLLgttIVISSNHWMaIWTGLEINTLAIIPLIS-KYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWD 79
Cdd:COG1009 118 LLFMAAMLG---LVLSDNLLL-LFVFWELVGLCSYLLIGfWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLN 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 80 ITQLNH----PISCALLTTAIAM-------KLGLVPFHFWFPEVLQGSSLTTAMLLSTVM---------KFPPItilFLT 139
Cdd:COG1009 194 FSELLAaaptILSSPLLTLILLLlllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSPL---FAL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 140 SHSLNSTLLTIMAIlsTAL-GGWMGLNQTQIRKILAFSSISHLGWMTIIL---IYNPKLTLLT---FYMYCLMTVT--VF 210
Cdd:COG1009 271 SPVWLTVVAIIGAI--TALfAALIALAQTDIKRVLAYSTVSQLGYMFLALgvgAYVAALFHLLthaFFKALLFLGAgsVI 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 211 LTLNTTKTLKLSTMmisWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTkqEMTTTAMIIAILSLLGLFFylrL 290
Cdd:COG1009 349 HATGTRDIRKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAAL--EAGGLGPLLLAVALLGAFL---T 420
|
....*
gi 2319130520 291 AYYST 295
Cdd:COG1009 421 AFYSF 425
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
47-293 |
3.22e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 57.65 E-value: 3.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 47 IEAAIKYFLVQAAASTLLLFS--------STIN-AWSSGQWDITQLNHPIS--CALLTTAIAMKLGLVPFhFWFPEVLQG 115
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGigllygtfGTLNmAHIAMRLNDMGDTATLTtiALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 116 SSLTTAMLLSTVMK-------FPPITILFLTSHSLNSTLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTI-I 187
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 188 LIYNPK-LTLLTFYMYCLMTVTVFLTLNT------TKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLT 260
Cdd:PRK12663 316 ALGTPAgINGAIFYLVHDMVVKTALFLIAgslvrlTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|....*.
gi 2319130520 261 IQ---ELTKQEMTTTAMIIAILSLLGLFFYLRLAYY 293
Cdd:PRK12663 396 VQgalDNGAYILLALMLITSLITMYSLFRIFFLAYW 431
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
37-261 |
1.67e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 55.21 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 37 LISKYHHPRAIEAAIKYFLVQAAASTLLLFS----STINAWSSGQWDITQL-NHPISCALLT-------TAIAMKLGLVP 104
Cdd:PRK05846 150 LIGVWGGKNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLlNLPLPPGVQYwlflaffIAFAVKMPMFP 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 105 FHFWFPEVLQGSSLTTAMLLSTVMK--------------FPPITILFltshslnSTLLTIMAILSTALGGWMGLNQTQIR 170
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLkmgaygllrfslplFPDASHEF-------APIIITLGVIAIIYGALVALAQTDIK 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 171 KILAFSSISHLGWMTI-ILIYNPK-LTLLTFYM--YCLMTVTVFLTLNT----TKTLKLSTMMISWTKAPTLNATLMMTL 242
Cdd:PRK05846 303 KLIAYSSISHMGFVTLgIFAGNQLgIQGAIFQMisHGLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFFA 382
|
250
....*....|....*....
gi 2319130520 243 LSLAGLPPLTGFLPKWLTI 261
Cdd:PRK05846 383 MASLGLPGTSGFVGEFLIL 401
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
103-283 |
2.61e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 54.93 E-value: 2.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 103 VPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNST-----LLTIMAILSTALGGWMGLNQTQIRKILAFSS 177
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 178 ISHLGWMTIILIYNPKLTLLTFYMY----CLMTVTVFLTLNT----TKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLP 249
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170 180 190
....*....|....*....|....*....|....
gi 2319130520 250 PLTGFLPKWLTIQELTkqEMTTTAMIIAILSLLG 283
Cdd:PRK12647 372 PLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
74-257 |
3.16e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.93 E-value: 3.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 74 SSGQWDITQL-NHPISCALLTTAIAM-------KLGLVPFHFWFPEVLQGSSLTTAMLLSTVM---------KFPPItil 136
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 137 FLTSHSLNSTLLtIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIL-IYNPKLTLLTFYMYC---LMTVTVFLT 212
Cdd:PRK12644 260 FADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMLLahaLFKAALFLV 338
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2319130520 213 L----NTTKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPK 257
Cdd:PRK12644 339 VgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
7-186 |
8.02e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 53.22 E-value: 8.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 7 LLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAA------STLLLFSSTINAWSSGQWDI 80
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 81 TQLNHP----------ISCALLTTAIAMKLGLVPFHFWFPEV-LQGSSLTTAMLLSTVMKFPPITILFLTS-------HS 142
Cdd:PRK08676 191 TELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2319130520 143 LNSTLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTI 186
Cdd:PRK08676 271 QFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLL 314
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-265 |
9.56e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 53.03 E-value: 9.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 27 LEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLNH--PISCALLTTAIAMKLGLVP 104
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 105 FHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNST--LLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLG 182
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 183 WMTIILIYNPKLTLltfyMYCLMTVTVFLTLNT----TKTLKLSTMMISWTKAPtlnatLMMTLLSLAGLPPLTGFLPKW 258
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLCAGAlpsrNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKV 353
|
....*..
gi 2319130520 259 LTIQELT 265
Cdd:PRK07234 354 LTLKNLL 360
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
28-302 |
4.43e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.80 E-value: 4.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 28 EINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLNHPI-----------SCALLTTAI 96
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALlvnptspviygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 97 AMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILF--------LTSHSLNSTLLTIMAILSTALGGWMGLNQTQ 168
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifklfggLSYFPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 169 IRKILAFSSISHLGWMTIILIYNPKLTLLT---------FYMYCLMtVTVFLTLNTTKTLKLSTMMISWTKAPTLNATLM 239
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAgifhainhvIYKSALF-LGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVL 368
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2319130520 240 MTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSlLGLFFYLRLAYYStITLPPNP 302
Cdd:PRK06277 369 CAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVS-IGTFVSMMKAFYL-IYLKPKP 429
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
90-257 |
2.59e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 48.81 E-value: 2.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 90 ALLTTAIAMKLGLVPFHFWFPEVL-QGSSLTTAM---LLSTVMKFPPI---TILFlTSHSLNsTLLTIMAILSTALGGWM 162
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTAVfagLLTKVGVYAIIrthTLLF-PGGGLD-TLLMVVALLTMVVGILG 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 163 GLNQTQIRKILAFSSISHLGWMT--IILIYNPKLTLLTFYMYCLMTV--TVFLTL----NTTKTLKLSTMMISWTKAPTL 234
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMVfgIALSTVAGLSGAIYYVAHHITVqtTLFLVVglieRQAGSSSLRRLGGLAKASPLL 370
|
170 180
....*....|....*....|...
gi 2319130520 235 NATLMMTLLSLAGLPPLTGFLPK 257
Cdd:PRK12665 371 AVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-286 |
3.96e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.19 E-value: 3.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 14 VISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQL---------N 84
Cdd:PRK12662 126 ILVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptN 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 85 HPISCALL--TTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLS----TVMKFPPITI--------LFLTSHSLNSTLLtI 150
Cdd:PRK12662 206 RAIQIGVLfiMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSgtstKVMIYLIIRIvydvfkanFVFTTLPFNNVFM-I 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 151 MAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTFYMY----CLMTVTVFLT-------LNTTKTL 219
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVsgsisyhFGTTKLE 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2319130520 220 KLSTMmisWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFF 286
Cdd:PRK12662 365 DCLNL---WKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIY 428
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
7-290 |
8.96e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 47.07 E-value: 8.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 7 LLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLNH- 85
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQl 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 86 ---------PISCALLTTAIAMKLGLVPFHFWFPEVLQGSSL-TTAMLLSTVMK---FPPITILFLTSHSLNST----LL 148
Cdd:PRK08377 197 agtidptvaQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKaglYAMARILYLMQNANGWSsvlkLV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 149 TIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTL--LTFYMY------CLMTVTVFLTLNTTKTLK 220
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVdaGVFHMInhaivkALLFLAVGYVGITLGGTE 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 221 LSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRL 290
Cdd:PRK08377 357 IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
37-186 |
1.09e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 46.56 E-value: 1.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 37 LISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQ--WDITQL---NHPISCALLT-----TAIAMKLGLVPFH 106
Cdd:PRK12561 126 LISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTftFDLAELgakSYPLALELLLyagflIAFGVKLPIFPLH 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 107 FWFPEVLQGSSLTTAMLLSTVM-KFPPITILFLT------SHSLNSTLLTIMAILSTALGGWMGLNQTQIRKILAFSSIS 179
Cdd:PRK12561 206 TWLPDAHGEASAPVSMILAGVLlKMGGYALIRFNvqmlpdAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVS 285
|
....*..
gi 2319130520 180 HLGWMTI 186
Cdd:PRK12561 286 HMGFVLL 292
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-290 |
1.14e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 46.48 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 97 AMKLGLVPFHFWFPE----------VLQGSSLTTAMLLSTVMKFppiTILFLTSHSLNSTLLTIMAILSTALGGWMGLNQ 166
Cdd:PRK07691 220 ATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFGVIGAVAY 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 167 TQIRKILAFSSISHLGWMTI-ILIYNPK-LTLLTFYMYCLMTVTVFL------TLNTTKTLKLSTMMISWTKAPTLNATL 238
Cdd:PRK07691 297 FDIKKIIIYNIMIAVGVILVgVAMMTESgMIGAIYYLIHDMIVKAALflligiMIKITGTTDLKKMGGLIKRYPVLGWMF 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2319130520 239 MMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRL 290
Cdd:PRK07691 377 FIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
4-184 |
1.75e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 46.23 E-value: 1.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 4 TMSLLLGTTIVISSNHWMAIWTGLEINTLAIIPLISKY-HHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQ 82
Cdd:PRK08168 106 LAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYpDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 83 LNHPISCA-----------LLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTV--------MKFPPitiLFLTSHSL 143
Cdd:PRK08168 186 LWAHLAAQgaspslqaaalLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAP---LLEQAPPA 262
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 2319130520 144 NsTLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWM 184
Cdd:PRK08168 263 R-WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
27-282 |
1.93e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 45.74 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 27 LEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLN------HPISCALLTTAIAMKL 100
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSglhgslKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 101 GLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNS------TLLTIMAILSTALGGWMGLNQTQIRKILA 174
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 175 FSSISHLGWMTIIL---IYNPKLTL---------------LTFymycLMTVTVFLTLNTTKTLKLSTMMiswTKAPTLNA 236
Cdd:PRK06525 302 YSTITQLGYMFFGLslaILGSRLALegsiayifnhafaksLFF----LVAGALSYSCGTRLLPRLRGVL---KKLPLVGV 374
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2319130520 237 TLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLL 282
Cdd:PRK06525 375 GFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLL 420
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
26-257 |
2.15e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 46.19 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 26 GLEINTLAIIPLISKyHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQLNHPISCA---LLTTAIAM---- 98
Cdd:PRK12650 138 AWELVSLASFFLIAR-SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAekpGLTTVVAVliav 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 99 ----KLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNST-----LLTIMAILSTALGGWMGLNQTQI 169
Cdd:PRK12650 217 aaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITALMGAVFAVQKTDL 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 170 RKILAFSSISHLGWM-TIILIYNP-KLT--LLTFYMYCLMTVTVFLTL----NTTKTLKLSTMMISWTKAPTLNATLMMT 241
Cdd:PRK12650 297 KKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSVTIA 376
|
250
....*....|....*.
gi 2319130520 242 LLSLAGLPPLTGFLPK 257
Cdd:PRK12650 377 ALSMAAVPPLFGFVSK 392
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
53-284 |
8.90e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 43.95 E-value: 8.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 53 YFLVQAAASTLLLFSSTINAW-SSGQWDITQLNHP-----ISCALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLST 126
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 127 VMKFPPI--TILFLTSHSLNS----TLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLG--------WMTIILIYNP 192
Cdd:PRK08667 246 VMLKVAVygLVRFLMDVLSPElwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 193 KLTLLTFYMYCLMTVT-------VFLT----LNTTKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLT- 260
Cdd:PRK08667 326 TLALLALGGALFHSLNhalfkslLFLTagsvVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLy 405
|
250 260
....*....|....*....|....*..
gi 2319130520 261 ---IQELTKQEMTTTAMIIAILSLLGL 284
Cdd:PRK08667 406 esfFQSFSVADPLIKILLFSVLAIFAL 432
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
101-266 |
2.13e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 42.89 E-value: 2.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 101 GLVPFHFWFPEVLQGSSLTTAMLLSTV-MKFPPITILFLTSHSLNSTL-----LTIMAILSTALGGWMGLNQTQIRKILA 174
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 175 FSSISHLG--------WMTIILIYNPKLTLLTFY--MYCLMTVTVFLTlnttkTLKLSTMMISW--------------TK 230
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFKS-----VLFLGAGSVWFrtghrdieklggigKK 349
|
170 180 190
....*....|....*....|....*....|....*.
gi 2319130520 231 APTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTK 266
Cdd:PRK08042 350 MPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
32-184 |
2.54e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.38 E-value: 2.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 32 LAIIPL---ISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSG--QWDITQLNH---PISCALLTTA-----IAM 98
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRShtlPLSTQLLLLApilvgFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 99 KLGLVPFHFWFPEVLQGSSLTTAMLLSTVM-KFPPITIL------FLTSHSLNSTLLTIMAILSTALGGWMGLNQTQIRK 171
Cdd:PRK06473 218 KIPLVPFHTWLPDAHVEASTPVSVLLAGVLlKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170
....*....|...
gi 2319130520 172 ILAFSSISHLGWM 184
Cdd:PRK06473 298 MVAYSSIGHMGYI 310
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
74-262 |
4.07e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 41.67 E-value: 4.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 74 SSGQWDITQLNHPISCALLTTAI---AM-KLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITIL-----FLTSHSLN 144
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNYIALSImiaAMtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWF 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 145 STLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIIL-IYNPKLTLLTFYMYCLMTVTVFLTLNTT-----KT 218
Cdd:MTH00207 243 NPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLgLGMPKLALFHLITHALFKALLFVCAGSLihshhHS 322
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2319130520 219 LKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQ 262
Cdd:MTH00207 323 QDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-278 |
6.73e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 40.96 E-value: 6.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 3 FTMSLLLGTTIVISSNhWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTI---NAWSSGQW- 78
Cdd:PRK06589 122 FNLTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFv 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 79 --DITQLNHPISCALLTTAIAMKLGLVPFHFWFPEVLQG----SSLTTAMLLSTVMKFPPITIL-------FLTSHSLNS 145
Cdd:PRK06589 201 sgGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAhypvSALLHAVIVVKTGLFCIYKILlyifglsYLQRIFAEF 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 146 TLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGW--MTIILIYNPKLTLLTFYMYC--LMTVTVFLTLNTTKTLK- 220
Cdd:PRK06589 281 NWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLVShsFAKICLFYSMGSIYSLKk 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2319130520 221 ---LSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAI 278
Cdd:PRK06589 361 edqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
95-261 |
6.86e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 6.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 95 AIAMKLGLVPFHFWFPEV-----LQGSSLTTAMLLS------TVMKFPpitILFLTSHSLNSTLLTiMAILSTALGGWMG 163
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKlggyglVRLSWP---ILPLGAQNLAPAVIA-MGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 164 LNQTQIRKILAFSSISHLGWMTIILIYNP--KLTLLTFYMYCLMTVTVFL-TLNTTKTLKLSTMMISWTKA-----PTLN 235
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMGLVSITLVTHDiiGLTGSIFIMLAHGIVSSLLfILVTILYDRHHTRLIKYYRGlsitmPIWG 394
|
170 180
....*....|....*....|....*.
gi 2319130520 236 ATLMMTLLSLAGLPPLTGFLPKWLTI 261
Cdd:MTH00226 395 TIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
9-275 |
8.31e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 8.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 9 LGTTIVISSNHWM---AIWTGLEINTLAIIPLISKYHHPRAIeaaikyFLVQAAASTLLLFSSTINAWS-SGQWDITQLN 84
Cdd:PRK06459 83 LGMAIVLTSDNYLlflAGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 85 HPISCALLTTAIAMKLGLVPFHF--WFPEVLQGSSLTTAMLLSTVMK----FPPITILFLTSHSLNSTL-LTIMAI--LS 155
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIPIGYFgLTILAIgaFS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 156 TALGGWMGLNQTQIRKILAFSSISHLGWM-----TIILIYNPKLTLLTFYMYCLMTVT---------VFLTLNTTKTLKL 221
Cdd:PRK06459 237 ILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSfahsvaktgLFLSSGLQEKQSI 316
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2319130520 222 STMMISWTKAPTLNATLMMtlLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMI 275
Cdd:PRK06459 317 TYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESLFMFAYVLHNVI 368
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
42-257 |
8.42e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.97 E-value: 8.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 42 HHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQL-----------NHP---ISCALLTTAIAMKLGLVPFHF 107
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselienikGHPlflITLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 108 WFPEVLQGSSLTTAMLLSTVMKFPPITILFLTSHSLNST-----LLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLG 182
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 183 WMTIILIYNPK------LTLLTFYMYCLMTVTVFLTL------NTTKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPP 250
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATFKACLFLvagivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 2319130520 251 LTGFLPK 257
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
90-262 |
1.04e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.47 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 90 ALLTTAIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVM-KFPPITI------LFLTSHSLNSTLLTIMAILSTALGGWM 162
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALS 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 163 GLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLL----TFYMYCLMTVTVF-------LTLNTTKTLKLSTMMISWTKA 231
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLgavaQMISHGLILALLFhlvgiveRKVGTRDLDVLNGLMNPIRGL 368
|
170 180 190
....*....|....*....|....*....|.
gi 2319130520 232 PTLNATLMMTLLSLAGLPPLTGFLPKWLTIQ 262
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-265 |
2.23e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 39.56 E-value: 2.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 105 FHFWFPEVLQGSSLTTAMLLSTVMKFPPITIL-----FLTSHSLNSTLLTIMAILSTALGGWMGLNQTQIRKILAFSSIS 179
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCS 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 180 HLGWMTIILIYNPKLTLLTFYM--YCLMTVTVFLTLN------TTKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPL 251
Cdd:MTH00032 324 QLGYMVLIIGIEGSHNVGLFHLvnHAFFKALLFLSAGsvihstTVDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYL 403
|
170
....*....|....
gi 2319130520 252 TGFLPKWLtIQELT 265
Cdd:MTH00032 404 TGFYSKDL-ILELT 416
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
98-288 |
3.22e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 38.70 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 98 MKLGLVPFHFWFPEVLQGSSLTTAMLLSTVMKFPPITILfLTSHSLNSTLLTIMAILSTALGGWMGLNqtqIRKILAFSS 177
Cdd:MTH00091 69 MKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVL-LQFFSKNFFFLLLFGLLICFFQMFLLKS---YKNLLILSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 178 ISHLGWMTIILIYN-PKLTLLTFYMYCLMTVtvfltlnttktlklstMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLP 256
Cdd:MTH00091 145 TESFNWLILSFFFSfFNVFFLFFYYFLLMLF----------------LIPKFNNVNKLNFVSWETLLVFMNLPFSVTFFV 208
|
170 180 190
....*....|....*....|....*....|....
gi 2319130520 257 KWLTIQELTKQEMTTTAMI--IAILSLLGLFFYL 288
Cdd:MTH00091 209 KIFSLSEILKVLGFFLLFLlfLMFLSVLSLSFWL 242
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
137-294 |
3.99e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.86 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 137 FLTSHSLNSTLLTIMAILSTALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYN-PKLTLLTFYMYCLMTVTVFLTL-- 213
Cdd:MTH00209 231 SLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFICAgn 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 214 ---NTTKTLKLSTMMISWTKAPTLNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSL-LGLFFYLR 289
Cdd:MTH00209 311 iihSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMR 390
|
....*
gi 2319130520 290 LAYYS 294
Cdd:MTH00209 391 LSYFS 395
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-294 |
4.06e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.61 E-value: 4.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 14 VISSNHWMAIWTGLEINTLAIIPLISKYHHPRAIEAAIKYFLVQAAASTLLLFSSTINAWSSGQWDITQ----LNHPISC 89
Cdd:PRK06591 131 MIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNS 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 90 ALLTTAIA-------MKLGLVPFHFWFPEVLQGSS---------LTTAMLLSTVMKFPPITILFLTSHSLNSTLLTIMAI 153
Cdd:PRK06591 211 RIITIAIGffligaiLKTAFFPMHFWMMRAYNNTAsvilvylagISTIIGIYIIYKFTYIIIGYETIKTAITNFIRPIAL 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 154 LSTALGGWMGLNQTQIRKILAFSSISHLGWMTIILIYNPKLTLLTfymyCLMTVTvflTLNTTKTLKLSTMMISWTKAPt 233
Cdd:PRK06591 291 ATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILP----SLLLAD---SINKIALFLIDAYNESYKREP- 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2319130520 234 LNATLMMTLLSLAGLPPLTGFLPKWLTIQELTKQEMTTTAMIIAILSLLGLFFYLRLAYYS 294
Cdd:PRK06591 363 NKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLL 423
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
95-186 |
5.65e-03 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 38.39 E-value: 5.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2319130520 95 AIAMKLGLVPFHFWFPEVLQGSSLTTAMLLSTVM----KFPPITI---LFLTSHSLNSTLLTIMAILSTALGGWMGLNQT 167
Cdd:CHL00011 220 AYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILlkmgAYGLIRInmeLLPHAHSIFSPWLVIVGAIQIIYAASTSLGQR 299
|
90
....*....|....*....
gi 2319130520 168 QIRKILAFSSISHLGWMTI 186
Cdd:CHL00011 300 NLKKRIAYSSVSHMGFIII 318
|
|
| |
