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Conserved domains on  [gi|2385313856|gb|WAF57828|]
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pMGF 110-1L [African swine fever virus]

Protein Classification

v110 domain-containing protein( domain architecture ID 10483228)

v110 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
v110 pfam01639
Viral family 110; This family of viral proteins is known as the 110 family. The function of ...
 9-110 4.28e-54

Viral family 110; This family of viral proteins is known as the 110 family. The function of members of this family is unknown. The family contains a central cysteine rich region with eight conserved cysteines. Some members of the family contains two copies of the cysteine rich region.


:

Pssm-ID: 279910  Cd Length: 102  Bit Score: 170.43  E-value: 4.28e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2385313856   9 LLSIPTLLYTYEIEPLERTSTPPEKELGYWCTYANHCRFCWDCQDGICRNKAFKNHSPILENDYIANCSIYRRNDFCIYY 88
Cdd:pfam01639   1 LLSQVMLLGTQEDGKLRITSIPPEEELEYWCTYMESCNFCWDCQDGICKNKAFKNHPPIGENDYIRDCWVSRWPNKCSYY 80

                          90       100
                  ....*....|....*....|..
gi 2385313856  89 ITSIKPHKTYRTECPQHINHER 110
Cdd:pfam01639  81 IEKIYYHNTHIMECSQPTHHNR 102
v110 pfam01639
Viral family 110; This family of viral proteins is known as the 110 family. The function of ...
 158-259 4.23e-49

Viral family 110; This family of viral proteins is known as the 110 family. The function of members of this family is unknown. The family contains a central cysteine rich region with eight conserved cysteines. Some members of the family contains two copies of the cysteine rich region.


:

Pssm-ID: 279910  Cd Length: 102  Bit Score: 157.72  E-value: 4.23e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2385313856 158 LLSQLMLYGELEDKKHKIGSIPPKRELEHWCTHGKYCNFCWDCQNGICKNKAFKNHPPIGENDFIRyDCWTTHLPNKCSY 237
Cdd:pfam01639   1 LLSQVMLLGTQEDGKLRITSIPPEEELEYWCTYMESCNFCWDCQDGICKNKAFKNHPPIGENDYIR-DCWVSRWPNKCSY 79

                          90       100
                  ....*....|....*....|....
gi 2385313856 238 --EKIYKHfNTHIMECSQPTHFKW 259
Cdd:pfam01639  80 yiEKIYYH-NTHIMECSQPTHHNR 102
 
Name Accession Description Interval E-value
v110 pfam01639
Viral family 110; This family of viral proteins is known as the 110 family. The function of ...
 9-110 4.28e-54

Viral family 110; This family of viral proteins is known as the 110 family. The function of members of this family is unknown. The family contains a central cysteine rich region with eight conserved cysteines. Some members of the family contains two copies of the cysteine rich region.


Pssm-ID: 279910  Cd Length: 102  Bit Score: 170.43  E-value: 4.28e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2385313856   9 LLSIPTLLYTYEIEPLERTSTPPEKELGYWCTYANHCRFCWDCQDGICRNKAFKNHSPILENDYIANCSIYRRNDFCIYY 88
Cdd:pfam01639   1 LLSQVMLLGTQEDGKLRITSIPPEEELEYWCTYMESCNFCWDCQDGICKNKAFKNHPPIGENDYIRDCWVSRWPNKCSYY 80

                          90       100
                  ....*....|....*....|..
gi 2385313856  89 ITSIKPHKTYRTECPQHINHER 110
Cdd:pfam01639  81 IEKIYYHNTHIMECSQPTHHNR 102
v110 pfam01639
Viral family 110; This family of viral proteins is known as the 110 family. The function of ...
 158-259 4.23e-49

Viral family 110; This family of viral proteins is known as the 110 family. The function of members of this family is unknown. The family contains a central cysteine rich region with eight conserved cysteines. Some members of the family contains two copies of the cysteine rich region.


Pssm-ID: 279910  Cd Length: 102  Bit Score: 157.72  E-value: 4.23e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2385313856 158 LLSQLMLYGELEDKKHKIGSIPPKRELEHWCTHGKYCNFCWDCQNGICKNKAFKNHPPIGENDFIRyDCWTTHLPNKCSY 237
Cdd:pfam01639   1 LLSQVMLLGTQEDGKLRITSIPPEEELEYWCTYMESCNFCWDCQDGICKNKAFKNHPPIGENDYIR-DCWVSRWPNKCSY 79

                          90       100
                  ....*....|....*....|....
gi 2385313856 238 --EKIYKHfNTHIMECSQPTHFKW 259
Cdd:pfam01639  80 yiEKIYYH-NTHIMECSQPTHHNR 102
 
Name Accession Description Interval E-value
v110 pfam01639
Viral family 110; This family of viral proteins is known as the 110 family. The function of ...
 9-110 4.28e-54

Viral family 110; This family of viral proteins is known as the 110 family. The function of members of this family is unknown. The family contains a central cysteine rich region with eight conserved cysteines. Some members of the family contains two copies of the cysteine rich region.


Pssm-ID: 279910  Cd Length: 102  Bit Score: 170.43  E-value: 4.28e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2385313856   9 LLSIPTLLYTYEIEPLERTSTPPEKELGYWCTYANHCRFCWDCQDGICRNKAFKNHSPILENDYIANCSIYRRNDFCIYY 88
Cdd:pfam01639   1 LLSQVMLLGTQEDGKLRITSIPPEEELEYWCTYMESCNFCWDCQDGICKNKAFKNHPPIGENDYIRDCWVSRWPNKCSYY 80

                          90       100
                  ....*....|....*....|..
gi 2385313856  89 ITSIKPHKTYRTECPQHINHER 110
Cdd:pfam01639  81 IEKIYYHNTHIMECSQPTHHNR 102
v110 pfam01639
Viral family 110; This family of viral proteins is known as the 110 family. The function of ...
 158-259 4.23e-49

Viral family 110; This family of viral proteins is known as the 110 family. The function of members of this family is unknown. The family contains a central cysteine rich region with eight conserved cysteines. Some members of the family contains two copies of the cysteine rich region.


Pssm-ID: 279910  Cd Length: 102  Bit Score: 157.72  E-value: 4.23e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2385313856 158 LLSQLMLYGELEDKKHKIGSIPPKRELEHWCTHGKYCNFCWDCQNGICKNKAFKNHPPIGENDFIRyDCWTTHLPNKCSY 237
Cdd:pfam01639   1 LLSQVMLLGTQEDGKLRITSIPPEEELEYWCTYMESCNFCWDCQDGICKNKAFKNHPPIGENDYIR-DCWVSRWPNKCSY 79

                          90       100
                  ....*....|....*....|....
gi 2385313856 238 --EKIYKHfNTHIMECSQPTHFKW 259
Cdd:pfam01639  80 yiEKIYYH-NTHIMECSQPTHHNR 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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