|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
2-570 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 573.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 2 MSIFYTVSMTFMMFSLFFFILSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGE 81
Cdd:MTH00165 1 MSMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 82 DPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLN 161
Cdd:MTH00165 81 DKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 162 FGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS 241
Cdd:MTH00165 161 FGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 242 GASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLL 321
Cdd:MTH00165 241 FFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 322 DQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSL 401
Cdd:MTH00165 321 NSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSM 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 402 VSDFNFSVLRDFNNCGGDMYKGMIYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLV- 480
Cdd:MTH00165 401 SGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMSLSYn 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 481 ---LNLNSLVFFLGSMWYIPVISSKVFSYPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKTYTIM 557
Cdd:MTH00165 481 lksLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLS 560
|
570
....*....|...
gi 2439186387 558 FMSMVLIILIGMF 570
Cdd:MTH00165 561 FLLWMIILLLLFL 573
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
9-572 |
6.69e-165 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 480.88 E-value: 6.69e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 9 SMTFMMFSLFFFILSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRF 88
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRF 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 89 VMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLNFGSWNYV 168
Cdd:MTH00151 88 MWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSIL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 169 YYYDYFFssfdYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS-GASFFM 247
Cdd:MTH00151 168 SMWDFKL----SGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSsGFSSFL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 248 LFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIR 327
Cdd:MTH00151 244 LFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIR 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 328 FMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNF 407
Cdd:MTH00151 324 LLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKS 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 408 SVLRDFNNCGGDMYKGMIYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLVLNLNSLV 487
Cdd:MTH00151 404 SSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLS 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 488 FFLGSMWYIPVISSKVFSYPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKyyiFHYLYLFDYNFKTYTIMFMSMVLIILI 567
Cdd:MTH00151 484 FFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANK---SFSVLNESWPVKWFNFFIGLILLLVLF 560
|
....*
gi 2439186387 568 GMFIL 572
Cdd:MTH00151 561 LVVIS 565
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
5-567 |
1.03e-152 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 449.87 E-value: 1.03e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 5 FYTVSMTFMMFSLFFFILSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPF 84
Cdd:MTH00209 2 KKMQMFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 85 KIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLNFGS 164
Cdd:MTH00209 82 KKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 165 WNYvyyydyFFSSFDYSI---ICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS 241
Cdd:MTH00209 162 WNI------FYLNFNSNLgsvISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 242 GA-SFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGL 320
Cdd:MTH00209 236 PFfSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSH 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 321 LDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYS 400
Cdd:MTH00209 316 GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFS 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 401 LVSDFNFSVLRDFNNCGGDMYKGMIYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLV 480
Cdd:MTH00209 396 LWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFL 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 481 LNLNSLVFFLGSMWYIPVISSKVFSYPTLFSGYLYLKLLDYGWLELYGSQGIYDFMkYYIFHYLYLFDYNFKTYTIMFMS 560
Cdd:MTH00209 476 IKGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVL-KKSSKLSQIIQNNSLKLFVTFMM 554
|
....*..
gi 2439186387 561 MVLIILI 567
Cdd:MTH00209 555 LILLGVI 561
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
1.34e-148 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 439.59 E-value: 1.34e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 1 MMSIFYTVSMTFMMFSLFFFILSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMG 80
Cdd:MTH00207 3 MFKPSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 81 EDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWML 160
Cdd:MTH00207 83 EDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 161 NFGSWNYVYYYDYFFSSFdysiICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIvN 240
Cdd:MTH00207 163 NQGHWSITNMWQTDMNNY----IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFL-S 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 241 SGASF--FMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIH 318
Cdd:MTH00207 238 STYWFnpALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIH 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 319 GLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFY 398
Cdd:MTH00207 318 SHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTL 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 399 YSLVSDFNFSVLRDFNNCGGDMYKGMIYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNF 478
Cdd:MTH00207 398 AVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNI 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 479 ----LVLNLNSLVFFLGSMWYIPVISSKVFSYPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKTY 554
Cdd:MTH00207 478 tktpLLINNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNY 557
|
570
....*....|....*.
gi 2439186387 555 tIMFMSMVLIILIGMF 570
Cdd:MTH00207 558 -LMMSFVLLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-570 |
2.65e-111 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 344.63 E-value: 2.65e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 1 MMSIFYTVSMTFMMFSLFFFILSLYLLLF--DLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMY 78
Cdd:MTH00211 23 PLNNSKLHIKKAVKLSFFISLIPLLIFLDqgLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWY 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 79 MGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTAL-SNRVGDVLILISIS 157
Cdd:MTH00211 103 MSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLLSMV 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 158 WML-NFGSWNYVyyyDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNP 236
Cdd:MTH00211 183 WLLlNLNSWEIS---QLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 237 MIVNSGASF-FMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGC 315
Cdd:MTH00211 260 LFQNNQLILgAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGS 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 316 YIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVR 395
Cdd:MTH00211 340 IIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFR 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 396 LFYYSLVSDFNFSVLRDFNNCGGDMYKGMIYLLILVILGGSLLSWLLFPV-PSCVYLPLSLKLLTMVVMMGGLYLGYLLS 474
Cdd:MTH00211 420 LIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEkPEILSLPFLLKLMPLLVTIVGLLLGLELV 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 475 IMNFLVLNLNSLVFFLGSMWYIPVISSKVFSYPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKTY 554
Cdd:MTH00211 500 NLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSY 579
|
570
....*....|....*..
gi 2439186387 555 -TIMFMSMVLIILIGMF 570
Cdd:MTH00211 580 lALLLLSLLLILLLFLL 596
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
41-572 |
6.89e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 292.26 E-value: 6.89e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 41 SLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGL 120
Cdd:MTH00208 93 SNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGF 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 121 VSYCLVIYYQNVKSFNAGMLTA-LSNRVGDV--LILISISwMLNFGSWNYVYYYdyFFSSFDYSIICYLIMG---AAMTK 194
Cdd:MTH00208 173 LSFLLISWWTTRNDANSSALQAvIYNRIGDIgiILFLSLS-LINFNSWNLNEIL--SLNNSNSFLINILLFGillAAAGK 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 195 SAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSG-ASFFMLFIGCLTMLMAGLVANFEFDLKKVIA 273
Cdd:MTH00208 250 SAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPwFLSLCLILGSLTALFAASTAISQHDIKKIIA 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 274 LSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGF 353
Cdd:MTH00208 330 YSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGT 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 354 PFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNFSVLRDFNNCGGDMYKGMIYLLILVIL 433
Cdd:MTH00208 410 PFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTII 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 434 GGSLLSWLLFPVPSCVyLPLSLKLLTMVVMMGGLYLGYLLSIMNFLVLNLNSLVFFLGSMWYIPVISSKVFSYPTLF-SG 512
Cdd:MTH00208 490 SGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFtSL 568
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 513 YLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKTYTIMFMSMVLIILIGMFIL 572
Cdd:MTH00208 569 FGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLII 628
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
7-398 |
1.25e-86 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 280.50 E-value: 1.25e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 7 TVSMTFMMFSLFFFILSLYLLLFDLSYMLEWevYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKI 86
Cdd:COG1009 34 AALAPLAAFVLSLLLFPAVLGGEVVVELYTW--IPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 87 RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTA-LSNRVGDVLILISISWMLN-FGS 164
Cdd:COG1009 112 RFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAiAGT 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 165 WNYVYYY---DYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS 241
Cdd:COG1009 192 LNFSELLaaaPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALS 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 242 -GASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGl 320
Cdd:COG1009 272 pVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA- 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2439186387 321 LDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILE-MCSMSVMNFLIYLMFFVSTGLTIMYSVRLFY 398
Cdd:COG1009 351 TGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEaALEAGGLGPLLLAVALLGAFLTAFYSFRLFF 429
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-532 |
1.18e-83 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 272.42 E-value: 1.18e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 1 MMSIFYTVSMTFM--MFSLFFFILSLYLLLfdlsyMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMY 78
Cdd:MTH00004 33 PTTIKTTVKLAFLisLIPLTLFLNSGTESI-----TTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWY 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 79 MGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTA-LSNRVGDVLILISIS 157
Cdd:MTH00004 108 MASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAiIYNRIGDIGLILSMA 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 158 WM-LNFGSWNYvyyyDYFFSSFDYSIIcyLIMG---AAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIR 233
Cdd:MTH00004 188 WLaMTLNTWEI----QQLFSPTQTPTL--PLLGlilAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIR 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 234 FNPMIVNSGASFFM-LFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLC 312
Cdd:MTH00004 262 THPLLQNNQTALTIcLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLC 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 313 AGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMY 392
Cdd:MTH00004 342 SGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAY 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 393 SVRLFYYSLVSDFNFSVLRDFNNCGGDMYKGMIYLLILVILGGSLLSWLLFPV-PSCVYLPLSLKLLTMVVMMGGLYLGY 471
Cdd:MTH00004 422 SLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLAL 501
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2439186387 472 LLSIM--NFLVLNLNSLVFFLGSMWYIPVISSKVFSYPTLFSGY-LYLKLLDYGWLELYGSQGI 532
Cdd:MTH00004 502 ELSNMttTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQkIATHLIDLSWLEKMGPKGL 565
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
46-520 |
3.57e-82 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 269.34 E-value: 3.57e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 46 SIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCL 125
Cdd:PRK06590 75 DVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 126 V-IYYQNVKSFNAGMLTALSNRVGDVLILISISWML-NFGSWNYVYYYDYFFSSFDYS-----IICYLIMGAAMTKSAQL 198
Cdd:PRK06590 155 IgFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFaEFGSLNYDEVFAAAPQFFGLGwsaltLICLLLFIGAMGKSAQF 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 199 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS-GASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTL 277
Cdd:PRK06590 235 PLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSpEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTM 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 278 SQLGLMMsiLAMGFPVLSF--FHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPF 355
Cdd:PRK06590 315 SQLGYMF--LALGVGAYAAaiFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPP 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 356 LSGFYSKDLILEMcSMSVMNFLIYLMFFVSTGLTIMYSVRLFYysLVsdFNFSVLRDFNN---CGGDMYKGMIYLLILVI 432
Cdd:PRK06590 393 FAGFFSKDEILEA-AFANGHINLFVAGLVGAFLTAFYSFRLIF--LV--FHGKEKEKIHHpheSPAVMTLPLIVLAVLSV 467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 433 LGGSLLSWLLFPV----------PSCVYLPLSLKLLTMVVMMGGLYLGYLL-----SIMNFLVLNLNSLVFFLGSMWYIP 497
Cdd:PRK06590 468 FAGALIVPPFLGVlplttelahgEAEHHLPVWVALLPLVVALAGIALAWLLylkkpTLPTSIAAPGRFLYTLLRNKYYFD 547
|
490 500
....*....|....*....|...
gi 2439186387 498 VISSKVFSYPTLFSGYLYLKLLD 520
Cdd:PRK06590 548 ELYEKVFVKPGLALARLLWKDGD 570
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
34-567 |
3.30e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 266.00 E-value: 3.30e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 34 MLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILL 113
Cdd:MTH00066 61 TTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFI 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 114 GWDGLGLVSYCLV-IYYQNVKSFNAGMLTALSNRVGDVLILISISW-MLNFGSWNYvyyyDYFFSSFDYSIIcyLIMG-- 189
Cdd:MTH00066 141 GWEGVGIMSFLLIgWWHARADANTAALQAVLYNRVGDIGLILSMAWlAMNTNSWEL----QQIFLLNDNSTL--PLLGli 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 190 -AAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFM-LFIGCLTMLMAGLVANFEFD 267
Cdd:MTH00066 215 lAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTIcLCLGALTTLFTAACALTQND 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 268 LKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSN 347
Cdd:MTH00066 295 IKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGS 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 348 LGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNFSVLRDFNNCGGDMYKGMIYL 427
Cdd:MTH00066 375 LALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRL 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 428 LILVILGGSLLSWLLFPV-PSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLVLNLNSLVFFLGSMWYIPVISSKVFSY 506
Cdd:MTH00066 455 AWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMHSFSNLLAFFPTIIHRLSPK 534
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2439186387 507 PTLFSGY-LYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFDYNFKTY-TIMFMSMVLIILI 567
Cdd:MTH00066 535 TNLNSGQnIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYlTLFLITLLLMLIL 597
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
37-520 |
8.29e-80 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 262.60 E-value: 8.29e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 37 WEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWD 116
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 117 GLGLVSYCLV-IYYQNVKSFNAGMLTALSNRVGDVLILISISWMLN-FGSWNYVYYYDYFFSSFDY--SIICYLIMGAAM 192
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFQEVFALAPGAFFSalTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 193 TKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNS-GASFFMLFIGCLTMLMAGLVANFEFDLKKV 271
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSpTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 272 IALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLC 351
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 352 GFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNFSVLRDFNNCGGDMYKGMIYLLILV 431
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 432 ILGGSLLSWLLFPVPSCVY-----------LPLSLKLLTMVVMMGGLYLGYLLSIMN-FLVLNLNSLVFFLGSM----WY 495
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLPtsaepalehhhVPALEIWSPTAVAILGILLAYLLYLGNpTLPAKIAQRHSGLYRLllnkWY 544
|
490 500
....*....|....*....|....*
gi 2439186387 496 IPVISSKVFSYPTLFSGYLYLKLLD 520
Cdd:TIGR01974 545 FDELYDKVFVKPYLFLGKLLWKDPD 569
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
50-536 |
3.85e-74 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 247.68 E-value: 3.85e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 50 GLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLV-IY 128
Cdd:MTH00020 75 GLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLInFW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 129 YQNVKSFNAGMLTALSNRVGDVLILISISWMLN-FGSWNY--VYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLP 205
Cdd:MTH00020 155 LTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDrFGSLDFssVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 206 AAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMI-VNSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMM 284
Cdd:MTH00020 235 DAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFeQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 285 SILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDL 364
Cdd:MTH00020 315 VACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDL 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 365 ILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNfSVLRDFNNCGGDMYKGMIYLLILVILGGSLLSWLLFP 444
Cdd:MTH00020 395 ILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTN-LKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEM 473
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 445 VPSC-----VYLPLSLKLLTMVVMMGGLYLG-----YLLSIMNFLVLNLNSLVF-FLGSMWYIPVISSKVFSYPTLFSGY 513
Cdd:MTH00020 474 IWSFqitlpPIVPLSIKLLPVFLSLGGIGLViilyfYSSKTFRVPFSFIGRNSYtFLGSAWQFNYILNYFLIKKIWKGGH 553
|
490 500
....*....|....*....|....
gi 2439186387 514 LY-LKLLDYGWLELYGSQGIYDFM 536
Cdd:MTH00020 554 LIsYRTIDKGVLELVGPKGISNFL 577
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
7-532 |
1.13e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 246.30 E-value: 1.13e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 7 TVSMTFM--MFSLFFFILSLYLLLfdlsyMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPF 84
Cdd:MTH00108 39 TISYAFIisLIPTMMFIHSGQEMI-----ISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPN 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 85 KIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTA-LSNRVGDVLILISISW-MLNF 162
Cdd:MTH00108 114 INRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAiLYNRIGDIGFILAMAWfLLNL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 163 GSWNYvyyYDYFFSSFDYSIICylIMG---AAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIV 239
Cdd:MTH00108 194 NSWDL---QQIFMLNPNNSNLP--LMGlllAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLME 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 240 -NSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIH 318
Cdd:MTH00108 269 nNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 319 GLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFY 398
Cdd:MTH00108 349 NLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIF 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 399 YSLVSDFNFSVLRDFNNCGGDMYKGMIYLLILVILGGSLLSWLLFP--VPScVYLPLSLKLLTMVVMMGGLYLGYLLSIM 476
Cdd:MTH00108 429 FALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPttIPQ-MTMPLYLKLTALAVTILGFILALELNLL 507
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 2439186387 477 -NFLVLNLNSLVF-FLGSMWYIPVISSKVFSYPTLF-SGYLYLKLLDYGWLELYGSQGI 532
Cdd:MTH00108 508 tNNLKFKYPSNTFkFSNMLGYFPTIMHRLPPYMNLTmSQKLASMLLDLIWLEKILPKTI 566
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
49-406 |
2.22e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 234.90 E-value: 2.22e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 49 MGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLV-I 127
Cdd:MTH00210 74 FGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 128 YYQNVKSFNAGMLTALSNRVGDVLILISISWMLN-FGSWNYVYYYDYFFSSFDYS---IICYLIMGAAMTKSAQLPFSAW 203
Cdd:MTH00210 154 WLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEFSTISSLLVTNINKEsltIICLLLFIGAVGKSAQLGLHTW 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 204 LPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSG-ASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGL 282
Cdd:MTH00210 234 LPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPlALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGY 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 283 MMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSK 362
Cdd:MTH00210 314 MVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSK 393
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2439186387 363 DLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFN 406
Cdd:MTH00210 394 DLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTN 437
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
53-399 |
2.68e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 234.73 E-value: 2.68e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 53 FDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 133 KSFNAGMLTA-LSNRVGDVLILISISWML-NFGSWNYvyyYDYFFSSFDYSIICYLiMG---AAMTKSAQLPFSAWLPAA 207
Cdd:MTH00137 166 ADANTAALQAvIYNRVGDIGLILAMAWMAtNLNSWEI---QQIFALSKDFDLTLPL-LGlilAATGKSAQFGLHPWLPSA 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 208 MAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSG-ASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSI 286
Cdd:MTH00137 242 MEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQtALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVT 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 287 LAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:MTH00137 322 IGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAII 401
|
330 340 350
....*....|....*....|....*....|...
gi 2439186387 367 EMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYY 399
Cdd:MTH00137 402 EALNTSHLNAWALTLTLIATSFTAVYSLRVVFF 434
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
34-405 |
7.33e-61 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 213.35 E-value: 7.33e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 34 MLEWEvySLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILL 113
Cdd:PRK07376 72 LFEWA--SAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 114 GWDGLGLVSYCLV-IYYQNVKSFNAGMLTALSNRVGDVLILISI---SWMLNfgswnyvyyydyffsSFDYSII------ 183
Cdd:PRK07376 150 FWELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGIlglFWATG---------------SFDFDGIadrlse 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 184 ---------------CYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPmiVNSGASFFML 248
Cdd:PRK07376 215 lvssgavsgwlalllCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYP--VFEQFPAVMT 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 249 FI---GCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLD--- 322
Cdd:PRK07376 293 VIawtGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvg 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 323 -----QQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSvmNFLIYLMFFVSTGLTIMYSVRLF 397
Cdd:PRK07376 373 hdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEA--NPALWFVGFLTAGMTAFYMFRMY 450
|
....*...
gi 2439186387 398 YYSLVSDF 405
Cdd:PRK07376 451 FLTFEGEF 458
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
7-403 |
1.87e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 198.22 E-value: 1.87e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 7 TVSMTFMMFSLFFFILSLYLLLFDLSYMLEWEVYSLNsssivmgLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKI 86
Cdd:MTH00095 4 LIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLK-------FNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFN 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 87 RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLNFGswn 166
Cdd:MTH00095 77 YFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSS--- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 167 yvyyYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFF 246
Cdd:MTH00095 154 ----YYFFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 247 MLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDI 326
Cdd:MTH00095 230 MLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDG 309
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2439186387 327 RFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSLVS 403
Cdd:MTH00095 310 RNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
38-368 |
4.45e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 194.79 E-value: 4.45e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 38 EVYSLNSSSIVM---GLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLG 114
Cdd:MTH00032 60 ELYKWIESEIFIthiGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 115 WDGLGLVSYCLVIYYQN-VKSFNAGMLTALSNRVGDVLILISISWM------LNFGSWN------------YVYYYDYFF 175
Cdd:MTH00032 140 WEGVGVCSYLLVAFWTTrIQANKAAIKAIVVNRVGDVGVILGMVLIyktigsLDFLTFNggsvgsgimdrgYYGGGAYES 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 176 SSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFMLFI-GCLT 254
Cdd:MTH00032 220 PLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIfGALT 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 255 MLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAM-GFPVLSFFHLLTHALFKSLLFLCAGCYIHGL-LDQQDIRFMGSF 332
Cdd:MTH00032 300 AFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTtVDEQDMRKMGGL 379
|
330 340 350
....*....|....*....|....*....|....*.
gi 2439186387 333 TMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEM 368
Cdd:MTH00032 380 IHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEL 415
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-385 |
1.75e-45 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 162.10 E-value: 1.75e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 105 SPNMISILLGWDGLGLVSYCLVIYY-QNVKSFNAGMLTALSNRVGDVLILISISWMLNFGSWNYVY----YYDYFFSSFD 179
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWgKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 180 YSIICYLIMGAAMTKSAQLPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLMIRFNPMIVNSG--ASFFMLFIGCLTML 256
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSpfIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 257 MAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPV---LSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFT 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2439186387 334 MSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVS 385
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
12-486 |
7.86e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 157.73 E-value: 7.86e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 12 FMMFSLFFFILSLYLLLFDLSYMLEWEVYSLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVML 91
Cdd:MTH00063 2 VLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 92 VGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWmlnfgswnyvyyy 171
Cdd:MTH00063 82 IVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGL------------- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 172 dYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFMLFIG 251
Cdd:MTH00063 149 -SCWGGSGSFLCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 252 CLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGS 331
Cdd:MTH00063 228 LLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCVYS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 332 FTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLF--YYSLVSDFNFSV 409
Cdd:MTH00063 308 SILYGSWNLFYLFLLVLGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCliLFGVKSSLSSGV 387
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2439186387 410 LRDFNNCGgdmykgmiyllILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGYLLSIMNFLVLNLNSL 486
Cdd:MTH00063 388 RFLFFNSG-----------LMVFLWLFINYYVFLLLDEVVYLGVFISLVLLLVQLLGLLVGVLFYDSNLFSNWSSSL 453
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
51-399 |
3.61e-41 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 154.15 E-value: 3.61e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 51 LIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQ 130
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 131 NVKSFNAGMLTALSNRVGDVLILISISWM-LNFGSWNYVYYYDYF--FSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAA 207
Cdd:COG0651 152 TKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLPDA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 208 MA-APTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGASFF----MLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGL 282
Cdd:COG0651 232 YPaAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPALFlgtlLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 283 MMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHGlLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGF 359
Cdd:COG0651 311 ILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA-TGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2439186387 360 YSKDLILEmCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYY 399
Cdd:COG0651 390 VSKWLLLQ-AALEAGAWLLAAVLLLSSLLTLAYFVRIFGR 428
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-396 |
2.97e-40 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 156.74 E-value: 2.97e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 43 NSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVS 122
Cdd:PRK12650 67 NGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLAS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 123 YCLVIyyQNVKSFNAGMLTALSNRVGDVLILI-------------SISWMLNFGSWNYvyyydyffSSFDYSIICYLIMG 189
Cdd:PRK12650 147 FFLIA--RSGSGGEAGSIRTLILTFFGGLTLLaavaiaatqtgttSLSGILHSDVWAE--------KPGLTTVVAVLIAV 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 190 AAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFMLFI-GCLTMLMAGLVANFEFDL 268
Cdd:PRK12650 217 AAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIvGMITALMGAVFAVQKTDL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 269 KKVIALSTLSQLGLMMSILAMGFPV---LSFFHLLTHALFKSLLFLCAgcyihGLLDQQ----DIRFMGSFTMSMPYSSI 341
Cdd:PRK12650 297 KKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLI-----GVVDHQagtrDIRRLGSLWRRMPFTFV 371
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2439186387 342 CFHVSNLGLCGFPFLSGFYSKDLILE-MCSMSVMNFLIYLMFFVST---GLTIMYSVRL 396
Cdd:PRK12650 372 SVTIAALSMAAVPPLFGFVSKEGMLTaFLEAPGGNAGVVLLLVGAAlgaVFTFAYSARL 430
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-367 |
3.14e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 156.23 E-value: 3.14e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 54 DWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK12647 63 DGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHERE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 134 SFNAGMLTALSNRVGDVLILI-------------SISWMLNFGswnyvyyyDYFFSSFDYSIICYLIMGAAMTKSAQLPF 200
Cdd:PRK12647 143 AARRAALQALLVTGGGGLALLaglillgnvtgtySLSELLASG--------DVIREHPLYLAILLLVLGGAFTKSAQFPF 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 201 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFML-FIGCLTMLMAGLVANFEFDLKKVIALSTLSQ 279
Cdd:PRK12647 215 HFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILpLFGGLTMLTGALLAVRQTDLKLILAYSTVSA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 280 LGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAgcyihGLLDQQ----DIRFMGSFTMSMPYSSICFHVSNLGLCG 352
Cdd:PRK12647 295 LGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVA-----GIIDHEtgtrDITKLGGLRRAMPITAAAALLAALSMAG 369
|
330
....*....|....*
gi 2439186387 353 FPFLSGFYSKDLILE 367
Cdd:PRK12647 370 LPPLFGFLAKELIYE 384
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
70-366 |
1.88e-39 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 153.51 E-value: 1.88e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 70 MVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLV-IYYQNVKSFNAGMLTALSNRVG 148
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 149 DVLILISIS---WMLnfGSWNYVYYYDYFF--------SSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSAL 217
Cdd:CHL00025 186 DFGLLLGILgfyWIT--GSFEFRDLFEIFNnliynnevNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISAL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 218 VHSSTLVTAGVYLMIR-FNPMIVNSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSF 296
Cdd:CHL00025 264 IHAATMVAAGIFLVARlLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAAL 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2439186387 297 FHLLTHALFKSLLFLCAGCYIHGL--------LDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:CHL00025 344 FHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL 421
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
51-405 |
1.27e-36 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 145.37 E-value: 1.27e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 51 LIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYY- 129
Cdd:TIGR00940 71 LYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWh 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 130 QNVKSFNAGMLTALSNRVGDVLILISISWML----NFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLP 205
Cdd:TIGR00940 151 HRAHSRYGAQKSLTITVFGGLAMLGGLILLGkitgSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 206 AAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFML-FIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMM 284
Cdd:TIGR00940 231 DAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVgLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIM 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 285 SILAMGFPVLSF----------------FHLLTHALFKSLLFLCAGCYIHGlLDQQDIRFMGSFTMSMPYSSICFHVSNL 348
Cdd:TIGR00940 311 VLLGLGSPSYHYqgddskiyalaavaavFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASA 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2439186387 349 GLCGFPFLSGFYSKDLILE---------MCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDF 405
Cdd:TIGR00940 390 AMAGVPPFNGFLSKEMFFAeaitahlvnPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFGRP 455
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-367 |
1.99e-35 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 142.25 E-value: 1.99e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 54 DWMSVIFMSLVLFISSMVLFYSNMYMG-EDPFKiRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNV 132
Cdd:PRK12648 75 DGLAWLFALLILGIGLLVVLYARYYLSpADPVP-RFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 133 KSFNAGMLTALS-------NRVGDVLILISISwmlnfGSwnyvYYYDYFFSSFD-------YSIICYLIMGAAMTKSAQL 198
Cdd:PRK12648 154 ADARRGARMALTvtgagglALLAGVLLLGHIV-----GS----YDLDVVLAAGDlirahplYPPALVLILLGAFTKSAQF 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 199 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFML-FIGCLTMLMAGLVANFEFDLKKVIALSTL 277
Cdd:PRK12648 225 PFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVgGAGLITLLLGAYFALFQHDLKGLLAYSTI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 278 SQLGLMMSILAMGFP---VLSFFHLLTHALFKSLLFLCAGCYIH--GlldQQDIRFMGSFTMSMPYSSICFHVSNLGLCG 352
Cdd:PRK12648 305 SHLGLITLLLGLGSPlaaVAAIFHIINHATFKASLFMAAGIIDHetG---TRDMRRLSGLRRLMPITATLAMVAAAAMAG 381
|
330
....*....|....*
gi 2439186387 353 FPFLSGFYSKDLILE 367
Cdd:PRK12648 382 VPLLNGFLSKEMFFA 396
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
47-366 |
4.03e-35 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 138.18 E-value: 4.03e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 47 IVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMG----EDPF---KIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLG 119
Cdd:PRK06525 67 ALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrEHPVhegTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITG 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 120 LVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWM-LNFGSWNYVYYYDyfFSSFDYSIICYLIMGAAMTKSAQL 198
Cdd:PRK06525 147 LCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLfLQTGTFALSALSG--LHGSLKYLVFLGILFAAWGKSAQL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 199 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFnpmIVNSG-----ASFFMLFIGCLTMLMAGLVANFEFDLKKVIA 273
Cdd:PRK06525 225 PFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA---IQSMGpiphvIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 274 LSTLSQLGLM-----MSIL--AMGFPVlSFFHLLTHALFKSLLFLCAGC--YIHGLLDQQDIRFMGSftmSMPYSSICFH 344
Cdd:PRK06525 302 YSTITQLGYMffglsLAILgsRLALEG-SIAYIFNHAFAKSLFFLVAGAlsYSCGTRLLPRLRGVLK---KLPLVGVGFC 377
|
330 340
....*....|....*....|..
gi 2439186387 345 VSNLGLCGFPFLSGFYSKDLIL 366
Cdd:PRK06525 378 VAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-367 |
1.46e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 139.67 E-value: 1.46e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 53 FDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKI-RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQN 131
Cdd:PRK12644 72 LDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 132 VKS-----FNAGMLTA---LSNRVGdvLILISISwmlnFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAW 203
Cdd:PRK12644 152 RAAsrraaLQALLVTTaggLAMLVG--IIILGQA----AGTYRLSELLADPPTGPAVSVAVVLILVGALSKSAIVPFHFW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 204 LPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFM-LFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGL 282
Cdd:PRK12644 226 LPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTvLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 283 MMSILAMGFP---VLSFFHLLTHALFKSLLFLcagcyIHGLLDQQ----DIRFMGSFTMSMPYSSICFHVSNLGLCGFPF 355
Cdd:PRK12644 306 LTVLVGIGTRdaaLAGLAMLLAHALFKAALFL-----VVGIIDHStgtrDIRKLSGLGRRQPVLAVVAALAAASMAGLPP 380
|
330
....*....|..
gi 2439186387 356 LSGFYSKDLILE 367
Cdd:PRK12644 381 LLGFVAKEAALE 392
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
54-401 |
3.38e-34 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 138.35 E-value: 3.38e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 54 DWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKI-RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQN- 131
Cdd:PRK12646 77 DGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNn 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 132 -------VKSFNAGMLTALSNRVGDVLILI-----SISWMLNfgswnyvyYYDYFFSS--FDYSIICYLImgAAMTKSAQ 197
Cdd:PRK12646 157 gdsqfgaIQSFMITVFGGLALLVGFIMLYImtgtnNITEILG--------QADHIKNHglFIPMIFMFLL--GAFTKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 198 LPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMI-VNSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALST 276
Cdd:PRK12646 227 FPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLgLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYST 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 277 LSQLGLMMSILAMG-------------FPVLS----FFHLLTHALFKSLLFLCAGCYIHGlLDQQDIRFMGSFTMSMPYS 339
Cdd:PRK12646 307 ISQLGMIMAMVGIGggyaqhqqdaiasIYVFVlfaaLFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKM 385
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2439186387 340 SICFHVSNLGLCGFPFLSGFYSKDLILE--MCSMSVMNFLIYLMFFVsTGLTIMYSVRLFYYSL 401
Cdd:PRK12646 386 NLVMTIAALSMAGVPFLNGFLSKEMFLDalTQTGQLSQFSLISMIII-VFIGVIASIFTFTYAL 448
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
54-396 |
7.22e-31 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 128.02 E-value: 7.22e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 54 DWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVK 133
Cdd:PRK12649 79 DGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRP 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 134 SFNAGMLTALSNRVGDVLILISISWMLNFGSWNY----VYYYDYFFSSFD----YSIICYLIMGAAMTKSAQLPFSAWLP 205
Cdd:PRK12649 159 ESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYdiatILQDSELIENIKghplFLITLILIFIGAAAKSAQGPFYIWLP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 206 AAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFMLF-IGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMM 284
Cdd:PRK12649 239 NAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLM 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 285 SIL--------AMGFPVLSfFHLLTHALFKSLLFLCAGCYIHGLLdQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFL 356
Cdd:PRK12649 319 TMYgyttyhepGLGVAAAT-FHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPL 396
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2439186387 357 SGFYSKDLI----LEMCSMSVMNFLIYLMFFVSTG--LTIMYSVRL 396
Cdd:PRK12649 397 NGFLSKEMFyetsVEMGALIGGPFTIIIPAVAVLGgvFTFAYSIKL 442
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
54-398 |
6.38e-29 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 121.96 E-value: 6.38e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 54 DWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKI-RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIY---- 128
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYwyer 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 129 ----YQNVKSFNAGMLTALSNRVGDVLILI-----SISWMLNFGSwnyVYYYDYFFSsfdYSIIcyLIMGAAMTKSAQLP 199
Cdd:PRK12645 157 easrYGAQKSMLITVFGGLSMLGGFILLYImtgsfSIREMIANAD---EIQNSPLFI---PAMI--LILLGAFTKSAQFP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 200 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGASFFML-FIGCLTMLMAGLVANFEFDLKKVIALSTLS 278
Cdd:PRK12645 229 FYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVtLVGLITLFWGSLNAVKQTDLKGILAFSTVS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 279 QLGLMMSILAMGFPVLSF----------------FHLLTHALFKSLLFLCAGCYIHGlLDQQDIRFMGSFTMSMPYSSIC 342
Cdd:PRK12645 309 QLGLIMSLLGIGAASLHYqgddskiyaaaitaaiFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTI 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2439186387 343 FHVSNLGLCGFPFLSGFYSKDLILE---------MCSMSVMNFLIYLMFFVSTGLTIMYSVRLFY 398
Cdd:PRK12645 388 ALIGALSMAGLPPFNGFLSKEMFFEsmlnateanLFSLDTWGVLFPVIAWVASVFTFVYSIIFIF 452
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
56-314 |
2.19e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 106.71 E-value: 2.19e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 56 MSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKsf 135
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP-- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 136 nAGMLTA----LSNRVGDVLILISIS-WMLNFGSWNY---VYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAA 207
Cdd:PRK08168 148 -FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLSLsalWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 208 MAAPTPVSALVHSStLVTAGVYLMIRFNPMIVNSGASFFMLFI-GCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSI 286
Cdd:PRK08168 227 MEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLvGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLE 305
|
250 260
....*....|....*....|....*...
gi 2439186387 287 LAMGFPVLSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08168 306 CGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-399 |
2.79e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 106.12 E-value: 2.79e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 185 YLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRF------NPMIVNSGASFFMLFIGCLTMLMA 258
Cdd:PRK08375 206 GFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfgGDFRFALGLGWLLAVLALLSMLVG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 259 GLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGC--YIHGLldqQDIRFMGSFT 333
Cdd:PRK08375 286 SLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAieVTYGT---RRLSELSGLG 362
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2439186387 334 MSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILeMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYY 399
Cdd:PRK08375 363 RRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLV-VGAVEAGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
94-366 |
8.91e-23 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 102.66 E-value: 8.91e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 94 LFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKS-FNAGMLTALSNRVGDVLILISISWML-NFGSWNYVYYY 171
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 172 DYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLMIRFnpMIVNSGAS-----F 245
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRV--VFDLLGAPgwwwgV 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 246 FMLFIGCLTMLMAGLVANFEFDLKKVIALST-------LSQLGLMMSILAMGFPVLS-------FFHLLTHALFKSLLFL 311
Cdd:PRK06521 278 LVLALGAISAVLGVLYALAEHDLKRLLAYSTienigiiFVGLGLAMVFIAYGMPLLAalaltaaLYHLLNHALFKSLLFL 357
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2439186387 312 CAGCYIHGlLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:PRK06521 358 GAGAVLHA-TGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLL 411
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
53-384 |
1.18e-22 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 102.12 E-value: 1.18e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 53 FDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVG---LFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIY- 128
Cdd:PRK08667 75 IDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSAltaLFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNd 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 129 YQNVKSFNAGMLT-ALSNRVGDVLILISISWMLNFGSWNYVYYYdyfFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAA 207
Cdd:PRK08667 155 YQEEETQRAGIFYfVMTQLSTVFLMLGIIVLFIQTGSFELSPLG---ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 208 M-AAPTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGA--SFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMM 284
Cdd:PRK08667 232 HpASPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELwwGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 285 --------------SILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLLDqQDIRFMGSFTMSMPYSSICFHVSNLGL 350
Cdd:PRK08667 311 mgiglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSI 389
|
330 340 350
....*....|....*....|....*....|....*.
gi 2439186387 351 CGFPFLSGFYSKDLILE--MCSMSVMNFLIYLMFFV 384
Cdd:PRK08667 390 AALPPFNGFASELLLYEsfFQSFSVADPLIKILLFS 425
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
61-361 |
1.79e-22 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 101.53 E-value: 1.79e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 61 MSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGML 140
Cdd:PRK07390 95 LELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAAR 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 141 TA-LSNRVGDVLILISISWMLNF-GSWNYVYYYDYF----FSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPV 214
Cdd:PRK07390 175 DAfLTKRVGDLLLLMGVVALSPLaGTLNFSDLAAWAatanLDPLTATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 215 SALvHSSTLVTAGVYLMIRFNPMIVNSG-ASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPV 293
Cdd:PRK07390 255 SIL-RNSVVVATGAWVLIKLQPVLALSPvALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2439186387 294 LSFFHLLTHALFKSLLFLCAGCYIHGLLDqQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYS 361
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
49-397 |
2.50e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 97.19 E-value: 2.50e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 49 MGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKI--RFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLV 126
Cdd:PRK06589 77 IGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 127 IYYQNVKSFNAGmLTALSNRVGDVLILISISWMLNFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPA 206
Cdd:PRK06589 157 GHTRNNISLSGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPA 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 207 AMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVN-------SGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQ 279
Cdd:PRK06589 236 AMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGlsylqriFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQ 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 280 LGL------MMSILAMGfpvLSFFHLLTHALFKSLLFLCAGCyIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGF 353
Cdd:PRK06589 316 LSLallsafILTPKALG---AAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGI 391
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2439186387 354 PFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLF 397
Cdd:PRK06589 392 PIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-398 |
1.62e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 95.04 E-value: 1.62e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 51 LIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQ 130
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 131 NVK-SFNAGMLTALSNRVGDVLILISISWM------LNFGSWNYVYYYDYFFSSF----DYSIICYLIMGAA----MTKS 195
Cdd:PRK12667 158 DRGdAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMADLSAKIRGLSFPLTGglagNPPLALGVALALAlwafTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 196 AQLPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGA---------SFFMLFIGCLTMLMAGLVANFE 265
Cdd:PRK12667 238 AIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPslidfraalSPILIILGAVSAIIGALMMVVQ 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 266 FDLKKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMPYSSIC 342
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIH-AAGTRDIDELAGLGRKMPIASFA 395
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2439186387 343 FHVSNLGLCGFPFLSGFYSKDLILEmCSMSVMNFLIYLMFFVSTGLTIMYSVRLFY 398
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFN-ALLESGFYLPALVLLIASAISLVGYFRAWY 450
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-569 |
1.40e-19 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 86.45 E-value: 1.40e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 392 YSVRLFYYSLVSDFNFSVLRDFNNCGGDMYKGMIYLLILVILGGSLLSWLLFPVPSCVYLPLSLKLLTMVVMMGGLYLGY 471
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 472 LLSIMN---FLVLNLNSLVFFLGSMWYIPVISSKVFSYPTLFSGYLYLKLLDYGWLELYGSQGIYDFMKYYIFHYLYLFD 548
Cdd:pfam06455 81 ELSNLSnkqLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
170 180
....*....|....*....|.
gi 2439186387 549 YNFKTYTIMFMSMVLIILIGM 569
Cdd:pfam06455 161 GLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-432 |
1.64e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 91.70 E-value: 1.64e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 54 DWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNV- 132
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTw 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 133 KSFNAGMLTALSNRVGDVLILISISWML-NFGSWNYVYY-YDYFFSSFDYSIICY-LIMGAAMTKSAQLPFSAWLPAAM- 208
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLaVKMSENPTVVAKIALaLFIAGLAMKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 209 AAPTPVSALVHSSTLvtAGVYLMIR-----FNPMIVNSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLM 283
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARvlfsiYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 284 M-----SILAMGFPVLS----------FFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMPYSSICFHVSNL 348
Cdd:PRK08376 327 LlglgvGLAALGDPAMAsygeialaggIYHIVNHALYKALLFLTAGAVIY-ETGTRNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 349 GLCGFPFLSGFYSKDLILEmcSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYSLVSDFNFSVLrDFNNCGGDMYKGMIYLL 428
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVM-NVKEPPKPMLVPMLILA 482
|
....
gi 2439186387 429 ILVI 432
Cdd:PRK08376 483 IAII 486
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-367 |
8.02e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 89.24 E-value: 8.02e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 186 LIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVNSGAsfFMLFIGCLTMLMAGLVANFE 265
Cdd:PRK07234 189 LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL--IVRIFGVGTALLGVLFALLE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 266 FDLKKVIALSTLSQLGLmmsILAMgfPVLSFFHLLTHALFKSLLFLCAGCyIHGLLDQQDIRFMGSFTMSMPYSSICFHV 345
Cdd:PRK07234 267 KDLKRMLAFSTISQLGF---ILAA--PLVGGLYALAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFSI 340
|
170 180
....*....|....*....|..
gi 2439186387 346 SnlglcGFPFLSGFYSKDLILE 367
Cdd:PRK07234 341 A-----GFPLLAGFVSKVLTLK 357
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
175-314 |
6.01e-16 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 80.85 E-value: 6.01e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 175 FSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSStLVTAGVYLMIRFNPMIVNSGASFFMLFIGCLT 254
Cdd:PRK08601 198 LGTWEKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIAQILLLIFASIS 276
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 255 MLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCAG 314
Cdd:PRK08601 277 VLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
38-398 |
7.34e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 77.73 E-value: 7.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 38 EVYSLNSSSIVMGLIFDWMSVIFMSL-VLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFlivSPNMISILLGWD 116
Cdd:PRK08668 52 EKLTLFFGGFKLTFTLTHLSWFFAMIsLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 117 GLGLVSYcLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMLN-FGSWNY--VYYYDYFFSSFDYSIICYL-IMGAAM 192
Cdd:PRK08668 129 IMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAkTGTFDFadISQGLINDTSTGFALIVFLfLLAFGV 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 193 TKSAQLPFSAWLPAAMA-APTPVSAlVHSSTLVTAGVYLMIR----------FNPMIVNSGASFF---MLFIGCLTMLMA 258
Cdd:PRK08668 208 AKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLvlyvlpgtklFSEFGTYRGVPLFnyiLAWLGNISIIVG 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 259 GLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMS 335
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLIFAAVIY-RTGTTKISEMGGLIEK 365
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2439186387 336 MPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGlTIMYSVRLFY 398
Cdd:PRK08668 366 MPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIG-SFLYVFRPLA 427
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
186-396 |
1.22e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 70.18 E-value: 1.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 186 LIMGAAMtKSAQLPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLMIR--FNPMIVNSGASF--FMLFIGCLTMLMAGL 260
Cdd:PRK08377 212 LIFGLAV-EAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARilYLMQNANGWSSVlkLVIIMATLTVFFAEL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 261 VANFEFDLKKVIALSTLSQLGLMMSILAMGFPV---LSFFHLLTHALFKSLLFLCAGcYIHGLLDQQDIRFMGSFTMSMP 337
Cdd:PRK08377 290 SALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVG-YVGITLGGTEIEKFEGLGKRMP 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2439186387 338 YSSICFHVSNLGLCGFPFLSGFYSKDLILeMCSMSVMNFLIYLMFFVSTGLTIMYSVRL 396
Cdd:PRK08377 369 LTALALTIGALSTVGIPLFNVFWSKFRII-LAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
199-397 |
1.88e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 66.26 E-value: 1.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 199 PFSAWLP-AAMAAPTPVSALvHSSTLVTAGVYLMIRFNPMIVNSGASFF---MLFIGCLTMLMAGLVANFEFDLKKVIAL 274
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFALPLFPEASAYFaplLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 275 STLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGcYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLC 351
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2439186387 352 GFPFLSGFYSKDLILemcsMSVMNFLIYLMFFVSTGLTI--MYSVRLF 397
Cdd:COG1008 385 GLPGTSGFVGEFLVL----LGAFQVNPWLAILAALGLILtaAYLLWMY 428
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
109-399 |
3.73e-11 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 65.69 E-value: 3.73e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 109 ISILLGWDGLGLVSYCLVIYYQNVKSFNAGMLTALSNRVGDVLILISISWMlnfgswnYVYYYDYFFSSFD--YSIICYL 186
Cdd:PRK12668 116 LTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLH-------YAETGSFAFGAIAglGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 187 IMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIVnsgasfFMLFIGCLTMLMAGLVANFEF 266
Cdd:PRK12668 189 ILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE------LLIYIGAAMAVYGVFFALLEN 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 267 DLKKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMPYSSICF 343
Cdd:PRK12668 263 DLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMPLTALFC 341
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2439186387 344 HVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYY 399
Cdd:PRK12668 342 LVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYF 397
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
193-400 |
1.27e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 63.81 E-value: 1.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 193 TKSAQLPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGASF---FMLFIGCLTMLMAGLVANFEFDL 268
Cdd:PRK07691 221 TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthyLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 269 KKVIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMPYSSICFHV 345
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2439186387 346 SNLGLCGFPFLSGFYSKDLILEmCSMSVMNFLIYLMFFVSTGLTIMYSVRLFYYS 400
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVE-GTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKG 432
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
193-366 |
3.10e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 62.64 E-value: 3.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 193 TKSAQLPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGASFF----MLFIGCLTMLMAGLVANFEFD 267
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFpgrlLLIFGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 268 LKKVIALSTLSQLGLMMSILAMGFPVLSF---FHLLTHALFKSLLFLCAG--CYIHGLLDQQDIRFMgsfTMSMPYSSIC 342
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGPLGIFaalLHMLNHSLTKSAIFFASGnvLQKYGTRDINVIRGL---LKVSPLTGWG 381
|
170 180
....*....|....*....|....
gi 2439186387 343 FHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:PRK06458 382 LMLGALAIAGMPPFGVFISEFLIL 405
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
198-359 |
1.65e-09 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 60.61 E-value: 1.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 198 LPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLMIRFNpmIVNSGASFF----MLFIGCLTMLMAGLVANFEFDLKKVI 272
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLS--LLGGNAPLWwgvaLLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 273 ALSTLSQLGLMM---------------SILAMGFpVLSFFHLLTHALFKSLLFLCAGCYIHgLLDQQDIRFMGSFTMSMP 337
Cdd:PRK08042 274 AYHTLENIGIILlglgagvtgialeqpALIALGL-VGGLYHLLNHSLFKSVLFLGAGSVWF-RTGHRDIEKLGGIGKKMP 351
|
170 180
....*....|....*....|..
gi 2439186387 338 YSSICFHVSNLGLCGFPFLSGF 359
Cdd:PRK08042 352 VISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
194-367 |
2.04e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.98 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 194 KSAQLPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLMIRFNPMIVNSGA-SFFMLFIGCLTMLMAGLVANFEFDLKKV 271
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGlDTLLMVVALLTMVVGILGAIAQSDIKRL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 272 IALSTLSQLGLMMSILAMGFPV-LS--FFHLLTHALFKSLLFLCAgcyihGLLDQQD----IRFMGSFTMSMPYSSICFH 344
Cdd:PRK12665 301 LSFTLVSHIGYMVFGIALSTVAgLSgaIYYVAHHITVQTTLFLVV-----GLIERQAgsssLRRLGGLAKASPLLAVLFF 375
|
170 180
....*....|....*....|...
gi 2439186387 345 VSNLGLCGFPFLSGFYSKDLILE 367
Cdd:PRK12665 376 VPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
194-400 |
2.80e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 59.58 E-value: 2.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 194 KSAQLPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRFNPMIV---NSGASFFMLFIGCLTMLMAGLVANFEFDLKK 270
Cdd:PRK12663 220 KAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFpqeRELLHPLLATMAAITMVIGALGALAYKDIRR 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 271 VIALSTLSQLGLMMSILAMGFPVL---SFFHLLTHALFKSLLFLCAGCYIhGLLDQQDIRFMGSFTMSMPYSSICFHVSN 347
Cdd:PRK12663 299 IAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV-RLTGYRSLQYLGGLYRKEPLFGALFLILI 377
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2439186387 348 LGLCGFPFLSGFYSKDLILEmCSMSVMNFLIYLMFFVsTGLTIMYSV-RLFYYS 400
Cdd:PRK12663 378 FAIGGLPPFSGFWGKVLLVQ-GALDNGAYILLALMLI-TSLITMYSLfRIFFLA 429
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
194-384 |
5.84e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 58.61 E-value: 5.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 194 KSAQLPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLMIRFNPMIVNSGA----SFFMLFIGCLTMLMAGLVANFEFDL 268
Cdd:PRK08676 219 KSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAaeqfSNVLIGLGIFSIAVAAFSMLSQRNL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 269 KKVIALSTLSQLGLMMSILAMGFPVLSF---FHLLTHALFKSLLFLCAGCyIHGLLDQQDIRFMGSFTMSMPYSSICFHV 345
Cdd:PRK08676 298 KKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAGI-LHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2439186387 346 SNLGLCGFPFLSGFYSKDLIL-EMCSMSVMNFLIYLMFFV 384
Cdd:PRK08676 377 GSAAIIGMPPFPLFLSKFFILlQLGGISVWLVLAVLLLLL 416
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
51-362 |
1.62e-08 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 57.05 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 51 LIFDWMSVIFMSLVLFISSMVLFYSNMYM-GEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLV-IY 128
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLeRRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 129 YQNVKSFNAGM----LTALSNrvgdVLILISISWMLNF-GSWNYVYYYDYFFSSFDYSIIcyLIMGAAMT------KSAQ 197
Cdd:COG1007 146 RDDRRSSEAALkyflLGALSS----GFLLYGISLLYGAtGSLNLAGIAAALAAGGANSPL--LLLGLVLVlaglafKLSA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 198 LPFSAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLMIRFNPMIVNSGASFF---MLFIGCLTMLMAGLVANFEFDLKKVI 272
Cdd:COG1007 220 VPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEAFPGLAADWqllLAVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 273 ALSTLSQLGLMMSILAMGFPV---LSFFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLG 349
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330
....*....|...
gi 2439186387 350 LCGFPFLSGFYSK 362
Cdd:COG1007 378 LAGIPPTAGFFGK 390
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
63-366 |
2.47e-08 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 56.49 E-value: 2.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 63 LVLFISSMVLFYSNMYMGEDPFKIRFVMLVGLFVLSMIFLIV--SPNMISILLGWDGLGLVSYCLVIYYQNVKSFNAGML 140
Cdd:TIGR01972 81 LLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGVIGVflALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMK 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 141 TALSNRVGDVLILISISWM--LNFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMA-APTPVSAL 217
Cdd:TIGR01972 161 FFLYTLAGSLLMLLAILGLyfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTAGSVI 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 218 VhSSTLVTAGVYLMIRFN-PMIVNSGASF--FMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVL 294
Cdd:TIGR01972 241 L-AGVLLKMGTYGFLRFNlPLFPDASLYFapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELG 319
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2439186387 295 ---SFFHLLTHALFKSLLFLCAGcYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:TIGR01972 320 isgAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLIL 393
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
143-366 |
5.88e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 55.21 E-value: 5.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 143 LSNRVGDVLILISISWM-----LNFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAMA-APTPVSA 216
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLvvvyyNATGTFDIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHVqAPTAGSV 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 217 LvHSSTLVTAGVYLMIRFN-PMIVNSGASF--FMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLG-LMMSILAMGFP 292
Cdd:PRK05846 248 L-LAGILLKMGAYGLLRFSlPLFPDASHEFapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGfVTLGIFAGNQL 326
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2439186387 293 VLS--FFHLLTHALFKSLLFLCAGcYIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLIL 366
Cdd:PRK05846 327 GIQgaIFQMISHGLSSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-392 |
8.95e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 51.66 E-value: 8.95e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 187 IMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIRF-------NPMIVNSGASFFMLFIGCLTMLMAG 259
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkaNFVFTTLPFNNVFMILAALAIVFGS 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 260 LVANFEFDLKKVIALSTLSQLG---LMMSILAMGFPVLSFFHLLTHALFKSLLFLCAGCYIHGLlDQQDIRFMGSFTMSM 336
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGyiiLAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSM 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 2439186387 337 PYSSICFHVSNLGLCGFPFLSGFYSKDLILEmCSMSVMNFLIYLMFFVSTGLTIMY 392
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILD-AFIKSNAWIGLVVLLVGSGLSVIY 428
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
222-398 |
6.83e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 48.87 E-value: 6.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 222 TLVTAGVYLMIRFNPMIVNSGASFFMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFP---VLSFFH 298
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPlgiVAGIFH 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 299 LLTHALFKSLLFLCAGCyIHGLLDQQDIRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLI 378
Cdd:PRK06277 324 AINHVIYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELA 402
|
170 180
....*....|....*....|
gi 2439186387 379 YLMFFVSTGlTIMYSVRLFY 398
Cdd:PRK06277 403 IIMIIVSIG-TFVSMMKAFY 421
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
60-314 |
2.08e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 47.48 E-value: 2.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 60 FMSLVLFISSMVLFYSNMY-MGEDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQNvKSFNAG 138
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYsIEYDHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 139 MLTALSNrvgdvlilISISWMLNFGSWNYVYYYDYFFSSFDYSIICYLIMGAAMTKSAQLPF--SAWLPAAMAAPTPVSA 216
Cdd:PRK06459 124 VFMAFGE--------LSTVLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGNAPSNFS 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 217 LVHSSTLVTAGVYLMIRFNPMIVNSGASFF---MLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAM---- 289
Cdd:PRK06459 196 AILSATMTLMGVYGILKMTILTQTIPIGYFgltILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvt 275
|
250 260 270
....*....|....*....|....*....|....
gi 2439186387 290 --------GFPVLS-FFHLLTHALFKSLLFLCAG 314
Cdd:PRK06459 276 kqlitsieHFSLITvILYSFAHSVAKTGLFLSSG 309
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
51-450 |
2.43e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 47.03 E-value: 2.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 51 LIFDWMSVIFMSLVLFISSMVLFYSNMymgeDPFKIRFVMLVGLFVLSMIFLIVSPNMISILLGWDGLGLVSYCLVIYYQ 130
Cdd:PRK12664 32 PVYNLDLVLFIVLSFSLALIFLYILPI----KNMRFSEMLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGC 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 131 NVKSFNAGMLTALSNRVGDVLILISISWMLNFGSWNyvyyydyffssfdySIICYLIMGAAMTKSAQLPFSAWLPAAMAA 210
Cdd:PRK12664 108 PGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYT--------------GYCKLLFMLGLLINCACFPASSWVVDAYPA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 211 PTPVSALVHSSTLVTAGVYLMIRFNpmivnSGASFfMLFIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMmsILAMG 290
Cdd:PRK12664 174 ASNFGIIVLSLFTTKVAALVLLLFF-----SGEEI-LLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLL--IIAIG 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 291 FPVLS-------FFHLLTHALFKSLLFLCAGCYIHGLLDQQDIRFMGSFTMSMpySSICFHVSNLGLCGFPFLSGFYSKD 363
Cdd:PRK12664 246 FSGSSgvaigilILQIVLSVVYQTLLFMVADSVINRTRKFNLNRVGGLFKMSL--EAMCCIIAILNMGAFPGTAGFVSKS 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 364 LILEMCSMSVMNFLIYLMFFVSTGLTIMYSV--RLFYYSLVSDFNFSVLRDFNNCGGDMykGMIYL-LILVILGGSLLSW 440
Cdd:PRK12664 324 LITHSIDTAGLTLVLYKKLFLICSLLLFASVglKFFWYAFISKSKSKPEAEKVYIGSKL--SMIILvLICVVLGMFNSYL 401
|
410
....*....|
gi 2439186387 441 LLFPVPSCVY 450
Cdd:PRK12664 402 LFYNLPSFVY 411
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
41-88 |
6.52e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 40.49 E-value: 6.52e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 2439186387 41 SLNSSSIVMGLIFDWMSVIFMSLVLFISSMVLFYSNMYMGEDPFKIRF 88
Cdd:pfam00662 3 SVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
184-400 |
8.45e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 41.73 E-value: 8.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 184 CYLIMGAAMTKSAQLPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLMIrfnpMIVNSGASFFMLFIGCLTMLMAGLVAN 263
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLL----MTSNSLNPTLLLTLAILSTLIGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 264 FEFDLKKVIALSTLSQLGLMMSILAMGfPVLSFFHLLTHALFKSLLFLcagcyIHGLLDQQDIRFMGSFTMSMPYSSICF 343
Cdd:MTH00112 171 NQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTL 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2439186387 344 HVSNLGLCGFPFLSGFYSKDLILEMCSMSVMNFLIYLMFFVSTgLTIMYSVRLFYYS 400
Cdd:MTH00112 245 MLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSL-LSLFFYLRLTYIS 300
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
101-362 |
2.43e-03 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 40.76 E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 101 FLIVSPNMISILLGWDGLGLVSYCLVIYY-QNVKSFNAGMLTALSNRVGDVLILISISWM-------LNFGSWNYVYYYD 172
Cdd:CHL00049 126 FLCGANDLITIFVALECLSLCSYLLSGYTkKDVRSNEATMKYLLMGGASSSILVYGFSWLyglsggeIELQEIVNGLINT 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 173 YFFSSFDYSIICYLIMGAAMTKSAQLPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLMIRFNPMI---VNSGASFFML 248
Cdd:CHL00049 206 QMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPfyfSSNEWHLLLE 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186387 249 FIGCLTMLMAGLVANFEFDLKKVIALSTLSQLGLMMSILAMGFPVLSFFHLLTHALFKSLLFLCA-GCYI-HGLLDQQD- 325
Cdd:CHL00049 285 ILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTfACIVlFGLRTGTDn 364
|
250 260 270
....*....|....*....|....*....|....*..
gi 2439186387 326 IRFMGSFTMSMPYSSICFHVSNLGLCGFPFLSGFYSK 362
Cdd:CHL00049 365 IRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| |
