|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-441 |
3.71e-133 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 390.67 E-value: 3.71e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 1 MLKFMLSMLFMIPLSFF-NLWWLFFGWLILYFVMLIMSGSFGFLYMNLGMGMGLDFLSWLMVMLSLWICSLMVMSSLKIK 79
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLkNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 80 FTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLLW 159
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 160 LEDFCGSLSMLFLSDWCD-SMYMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISF 238
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSlNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 239 YSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSI 318
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 319 AYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSLYLYS 398
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2439186388 399 YSQHGVSHSGLYSLCSCYMSEFHLVFLHWFPLNVLFFCCDYFI 441
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFM 443
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
32-440 |
7.08e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 335.27 E-value: 7.08e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 32 VMLIMSGSFGFLYMNLGMGMGLDFLSWLMVMLSLWICSLMVMSSLKIKFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSF 111
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 112 YLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGSLSMLFLSDWCDSM----YMYISMIL 187
Cdd:MTH00150 81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLssmgLWGLLVFL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 188 AFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVD 267
Cdd:MTH00150 161 AFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 268 LKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFL 347
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 348 LSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSLYLYSYSQHGVSHSGLYSLCSCYMSEFHLVFLHW 427
Cdd:MTH00150 321 FCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHW 400
|
410
....*....|...
gi 2439186388 428 FPLNVLFFCCDYF 440
Cdd:MTH00150 401 VPLLLLILKSDLL 413
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
4.73e-101 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 308.98 E-value: 4.73e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 1 MLKFMLSMLFMIPLSFF---NLWWLFFGW-LILYFVMLIMSGSFGFLYMNLGMGMGLDFLSWLMVMLSLWICSLMVMSSL 76
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIkypWSWALTFSTlLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 77 KIKFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLN 156
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 157 LLWLEDFCGSLSMLFLSDWCDSMYMY----ISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI 232
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYLMnlwwLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 233 MKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGL 312
Cdd:MTH00014 241 SSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 313 FCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAY 392
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2439186388 393 SLYLYSYSQHGVSHSGLYSLCSCYMSEFHLVFLHWFPLNVLFFCCD 438
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPD 446
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
1.07e-100 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 307.68 E-value: 1.07e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 1 MLKFMLSMLFMIPLSFFNLWWLFFG--WLILYFVMLIMSGSFGFLYMNLGMGMGLDFLSWLMVMLSLWICSLMVMSSLKI 78
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSnlLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 79 KFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLL 158
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 159 WLEDFCGSLSMLFLSDWCDSMYM----YISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMK 234
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFYlflyWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 235 LISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFC 314
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 315 LSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSL 394
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2439186388 395 YLYSYSQHGVSHSGLYSLCSCYMSEFHLVFLHWFPLNVLFF 435
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILIL 441
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-403 |
9.55e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 295.18 E-value: 9.55e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 1 MLKFMLSMLFMIPLSFF----NLWWLFFGW-LILYFVMLIMSGSFGFLYMNLGMGMGLDFLSWLMVMLSLWICSLMVMSS 75
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskpkFLWTNTTTYsLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 76 ---LKiKFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLP 152
Cdd:MTH00124 81 qnhLQ-HEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 153 LLLNLLWLEDFCGSLSMLFL--------SDWCDSMyMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKL 224
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLqlthptltNSWTNLL-LWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 225 GGYGIIRIMKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVG 304
Cdd:MTH00124 239 GGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 305 HGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSyNLTLILFM 384
Cdd:MTH00124 319 HGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWS-PTTIILTG 397
|
410 420
....*....|....*....|
gi 2439186388 385 LS-FLSCAYSLYLYSYSQHG 403
Cdd:MTH00124 398 LAtLITASYTLYMFLSTQRG 417
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
4-435 |
1.10e-90 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 282.25 E-value: 1.10e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 4 FMLSMLFMIPLSFFNLWW---LFFGWLILYFVMLIMSGSFGFLYMNLGMGMGLDFLSWLMVMLSLWICSLMVMSSLKI-- 78
Cdd:MTH00044 7 LSLGIAITSWIVPKNKLWpisISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHls 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 79 KFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLL 158
Cdd:MTH00044 87 NNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 159 WLEDFCGSLSM-LFLSDWCDSMYMYIS------MILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIR 231
Cdd:MTH00044 167 AIYSSSSSLSIpLSELNWLTSLSSNSSsiwwifCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIR 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 232 IMKLISFYSL-SLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSS 310
Cdd:MTH00044 247 LINLFSLPSAnNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSS 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 311 GLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSC 390
Cdd:MTH00044 327 ALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGA 406
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2439186388 391 AYSLYLYSYSQHGVSHSGLYSLCSCYMSEFHLVFLHWFPLNVLFF 435
Cdd:MTH00044 407 IYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIII 451
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-430 |
7.14e-88 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 274.87 E-value: 7.14e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 1 MLKFMLSMLFMIPLSFF-NLWWLFFGWLILYFVMLIMSGSFGFLYMNLGMG----MGLDFLSWLMVMLSLWICSLMVMSS 75
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLsPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFtnkyFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 76 ---LKiKFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLP 152
Cdd:MTH00068 81 qnhLK-NEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 153 LLLNLLWLEDFCGSLSMLFLSDWCDSMYM-------YISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLG 225
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMtytnkiwWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 226 GYGIIRIMKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGH 305
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 306 GLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFML 385
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2439186388 386 SFLSCAYSLYLYSYSQHGVSHSGLYSLCSCYMSEFHLVFLHWFPL 430
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPM 444
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
4-435 |
2.07e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 268.35 E-value: 2.07e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 4 FMLSMLFMIPLSFFNLWWLFFGWLILYFVMLIMSGSFGFLYMNLGMGM-------GLDFLSWLMVMLSLWICSLMVMSSL 76
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWsfsnlylSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 77 KIKFTSYFSEFYLFIIL--MLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLL 154
Cdd:MTH00206 81 NHMKNEPINRQRIYITLliVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 155 LNLLWLEDFCGSLSMLFLSDWCDSMY----MYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGII 230
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTTWnnnlWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 231 RIMKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSS 310
Cdd:MTH00206 241 RIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 311 GLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSC 390
Cdd:MTH00206 321 ALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTA 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2439186388 391 AYSLYLYSYSQHGVSHSGLYSLCSCYMSEFHLVFLHWFPLNVLFF 435
Cdd:MTH00206 401 IYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLIL 445
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-430 |
2.15e-85 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 268.68 E-value: 2.15e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 1 MLKFMLSMLFMIPLSFF-NLWWLFFGWLILYFVMLIMSGSFGFLYMNLGMGMGLDF----LSWLMVMLSLWICSLMVMSS 75
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLsKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFfsdsLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 76 LK--IKFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPL 153
Cdd:MTH00110 81 QHhlSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 154 LLNLLWLEDFCGSLSMLFLSDWCDSM-------YMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGG 226
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLpnswsnnLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 227 YGIIRIMKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHG 306
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 307 LCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSyNLTLILFMLS 386
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWS-NITIILMGLN 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2439186388 387 FLSCA-YSLYLYSYSQHGVSHSGLYSLCSCYMSEFHLVFLHWFPL 430
Cdd:MTH00110 400 MLITAlYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPL 444
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
4.93e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 239.47 E-value: 4.93e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 1 MLKFMLSMLFMIPLSFF-NLWWLFFgwLILYFVMLIMSGSFGFL-------YMNLGMGMGLDFLSWLMVMLSLWICSLMV 72
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLtPAKWLWT--TTLAHSLLIALASLTWLknlsetgWSSLNLYMATDPLSTPLLVLTCWLLPLMI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 73 MSSLKIKFTSYFSEFYLFIILM--LMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLAS 150
Cdd:MTH00127 79 LASQNHTAPEPINRQRMYITLLtsLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 151 LPLLLNLLWLEDFCGSLSML--------FLSDWCDSMYmYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLL 222
Cdd:MTH00127 159 LPLLVALLLLQNSTGTLSMLtlqysqplQLSSWADKLW-WAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 223 KLGGYGIIRIMKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLM 302
Cdd:MTH00127 238 KLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILM 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 303 VGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLIL 382
Cdd:MTH00127 318 IAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALT 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2439186388 383 FMLSFLSCAYSLYLYSYSQHGVSHSGLYSLCSCYMSEFHLVFLHWFPLNVL 433
Cdd:MTH00127 398 GLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLL 448
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
10-397 |
6.19e-54 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 187.19 E-value: 6.19e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 10 FMIPLSFFNLWWLFFGWLILYFVMLIMSGSFGFLYMNLGMGM-GLDFLSWLMVMLSLWICSLMVMSSLK-IKFtsYFSEF 87
Cdd:MTH00204 37 LAILFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVfAVDGVSLFFILLTTLLIPICILISWKsIKF--LFKEF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 88 YLFIiLMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGSL 167
Cdd:MTH00204 115 LLCL-LFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTT 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 168 SMLFLS----DWCDSMYMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI-MKLISFYSLS 242
Cdd:MTH00204 194 DYQILLniklPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEY 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 243 LNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYER 322
Cdd:MTH00204 274 FAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYER 353
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2439186388 323 LGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSLYLY 397
Cdd:MTH00204 354 HHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
51-397 |
9.35e-52 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 181.43 E-value: 9.35e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 51 MGLDFLSWLMVMLSLWICSLMVMSSLKIKFTSyfSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWG 130
Cdd:COG1008 78 LGVDGISLPLVLLTALLTPLAILASWNEIKKR--PKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 131 YqPERVSAGVYMIFYTllaslplllnllwledFCGSLSMLF---------------LSDWCDS-------MYMYISMILA 188
Cdd:COG1008 156 G-ERRIYAAIKFFLYT----------------LAGSLLMLVailalyflagaltfdIAELAAAplpltaqLLLFLAFFIA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 189 FLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI-MKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVD 267
Cdd:COG1008 219 FAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFaLPLFPEASAYFAPLLAALGVIGIIYGALVALAQTD 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 268 LKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFL 347
Cdd:COG1008 299 LKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLL 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2439186388 348 LSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSLYLY 397
Cdd:COG1008 379 AALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
67-397 |
1.10e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 175.63 E-value: 1.10e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 67 ICSLMVMSSLKikftsYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYT 146
Cdd:MTH00217 95 ICILISWNSIK-----FLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYT 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 147 LLASLPLLLNLLWLEDFCGSLSMLFLS----DWCDSMYMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLL 222
Cdd:MTH00217 170 FIGSVFMLLGIFTLYSYAGTTDYQALCclkiEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLL 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 223 KLGGYGIIRI-MKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFL 301
Cdd:MTH00217 250 KLGGYGFIRFsWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFL 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 302 MVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLI 381
Cdd:MTH00217 330 MLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVL 409
|
330
....*....|....*.
gi 2439186388 382 LFMLSFLSCAYSLYLY 397
Cdd:MTH00217 410 ASLGMVLSAGYSIYLY 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
51-397 |
2.76e-47 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 169.61 E-value: 2.76e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 51 MGLDFLSWLMVMLSLWICSLMVMSSLKiKFTSYFSEFYLFIILMLMFSLYCtFCSLSLFSFYLFFEFSLIPTLMLILGWG 130
Cdd:PRK05846 78 LGVDGISLLLVVLTALLTPLAVLASWE-EIKKRVKFYMAALLWLEGGVIGV-FAALDLLLFYVFFEAMLIPMYFLIGVWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 131 YqPERVSAGVYMIFYTLL----ASLPLLLNLLWLEDFCGSLSMLFLSDWCDSMYMYISMILAFL----VKLPMYMFHLWL 202
Cdd:PRK05846 156 G-KNRIYAATKFFLYTLLgsllMLVAIIYLVVVYYNATGTFDIADLLNLPLPPGVQYWLFLAFFiafaVKMPMFPLHTWL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 203 PKAHVEAPIGGSMILAGVLLKLGGYGIIRIMkLISFYSLSLNF--YLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHM 280
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAGILLKMGAYGLLRFS-LPLFPDASHEFapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHM 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 281 SLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLN 360
Cdd:PRK05846 314 GFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSG 393
|
330 340 350
....*....|....*....|....*....|....*..
gi 2439186388 361 LLGEISLLNGLISYSYNLTLILFMLSFLSCAYSLYLY 397
Cdd:PRK05846 394 FVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
51-397 |
2.92e-46 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 166.27 E-value: 2.92e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 51 MGLDFLSWLMVMLSLWICSLMVMSSLKIKFTSyfSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWG 130
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQKR--VKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 131 yQPERVSAGVYMIFYTLL---ASLPLLLNLLWLEDFCGSLSMLFLSDWCDS--MYMYISMILAFLVKLPMYMFHLWLPKA 205
Cdd:TIGR01972 151 -GPNRIYAAMKFFLYTLAgslLMLLAILGLYFLGGGTFDLLELLNLPLPFGvqTWLFLAFFIAFAVKVPLFPLHTWLPDA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 206 HVEAPIGGSMILAGVLLKLGGYGIIRI-MKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVI 284
Cdd:TIGR01972 230 HVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 285 SGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGE 364
Cdd:TIGR01972 310 LGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
330 340 350
....*....|....*....|....*....|...
gi 2439186388 365 ISLLNGLISYSYNLTLILFMLSFLSCAYSLYLY 397
Cdd:TIGR01972 390 FLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
83-422 |
2.73e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 164.32 E-value: 2.73e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 83 YFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLED 162
Cdd:MTH00226 128 YLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYN 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 163 FCGSLSMLFLSDwCDSM-------YMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI-MK 234
Cdd:MTH00226 208 IHGTTDYLTLAS-CSHVvseqtqkWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLsWP 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 235 LISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFC 314
Cdd:MTH00226 287 ILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFI 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 315 LSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEisLLNGLISYSYNLTLILFMLS--FLSCAY 392
Cdd:MTH00226 367 LVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE--YLSILSSFNWNPIIGVFVCSgvILSAVY 444
|
330 340 350
....*....|....*....|....*....|
gi 2439186388 393 SLYLYSYSQHGVSHSGLYSLCSCYMSEFHL 422
Cdd:MTH00226 445 SFYFANRVTFGAPGNLITFARDVNRREFYI 474
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
105-382 |
3.86e-44 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 155.93 E-value: 3.86e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 105 SLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGSLSMLFLS-------DWCD 177
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltgglNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 178 SMYMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYSLSLNFYLIIFSLYGGFL 257
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 258 VSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLS-SIAYERLGSRLFMLNKGLIL 336
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2439186388 337 YMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLIL 382
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
17-397 |
1.62e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 143.89 E-value: 1.62e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 17 FNLWWLFFGWLILYFVMLimsgsFGFLYMNLGMGMGLDFLSWLMVMLSLWICSLMVMSSLKIKFTSYFSEFYLFIILMLM 96
Cdd:MTH00094 1 LSLLFFFSPFLFFLFLMF-----FSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLLSEKNFNLLILSNLLILIC 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 97 fslYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEDFCgslsMLFLSDWC 176
Cdd:MTH00094 76 ---LLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFF----SLCYFDFF 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 177 DSMYMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYslsLNFYLIIFSLYGGF 256
Cdd:MTH00094 149 LSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 257 LVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLIL 336
Cdd:MTH00094 226 LSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFS 305
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2439186388 337 YMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSLYLY 397
Cdd:MTH00094 306 SSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLI 366
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-322 |
3.05e-29 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 119.37 E-value: 3.05e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 45 MNLGMGMGLDFLSWLMVMLSLWICSLMVMSSLKIKftsYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLM 124
Cdd:PRK12561 49 IGLEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT---RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 125 LILGWGYQpERVSAGVYMIFYT----LLASLPLLLNLLWLEDFCGSLSMLFLSDWCDS--MYMYISMILAFLVKLPMYMF 198
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTalasIFILVAGLALALSGDTFTFDLAELGAKSYPLAleLLLYAGFLIAFGVKLPIFPL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 199 HLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI-MKLISFYSLSLNFYLIIFS----LYGGFlvslICMRQVDLKMLIA 273
Cdd:PRK12561 205 HTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGvvniIYGAL----NAFAQDNVKRRLA 280
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2439186388 274 YSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYER 322
Cdd:PRK12561 281 YSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYER 329
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
47-401 |
2.01e-28 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 116.01 E-value: 2.01e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 47 LGMGMGLDFLSWLMVMLSLWICSLMVMSSLKIKFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLI 126
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 127 LGWGYqPERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGSLSMLFLS---DWCDSMYMYISMIL---AFLVKLPMYMFHL 200
Cdd:COG0651 148 ALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAarlAELDPGLLLAAFALllvGFGIKAALFPLHF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 201 WLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLI--SFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVA 278
Cdd:COG0651 227 WLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 279 HMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPS 358
Cdd:COG0651 307 QIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2439186388 359 LNLLGEISLLNGLISYSYNLTLILFML-SFLSCAYSLYLYSYSQ 401
Cdd:COG0651 387 SGFVSKWLLLQAALEAGAWLLAAVLLLsSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
89-341 |
8.00e-23 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 100.79 E-value: 8.00e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 89 LFIILML-MFS-LYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQpERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGS 166
Cdd:CHL00011 113 LFYFLMLaMYSgQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGLYGSN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 167 LSMLFLSDWCDSMY-------MYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI-MKLISF 238
Cdd:CHL00011 192 EPTLNFETLANQSYpvaleilFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPH 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 239 YSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSI 318
Cdd:CHL00011 272 AHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGT 351
|
250 260
....*....|....*....|....*
gi 2439186388 319 AYERLgsRLFMLNK--GLILYMPSM 341
Cdd:CHL00011 352 SYDRI--RLVYLDEmgGIAIPMPKI 374
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
85-335 |
2.32e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 99.39 E-value: 2.32e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 85 SEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQpERVSAGVYMIFYTLLASLPLLLNLLWLEDFC 164
Cdd:PRK06473 106 PRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 165 GSLSMLFLSDWCDS------MYMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI-MKLI- 236
Cdd:PRK06473 185 GASSFDYEPLRSHTlplstqLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFgVGLFp 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 237 ---SFYSLSLNFYLIIFSLYGgflvSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLF 313
Cdd:PRK06473 265 eawVYLAPWLATWAVVSVLYG----ASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLF 340
|
250 260
....*....|....*....|..
gi 2439186388 314 CLSSIAYERLGSRLFMLNKGLI 335
Cdd:PRK06473 341 LLVGVVYKKTGSRDVDVLRGLL 362
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-387 |
9.55e-22 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 97.47 E-value: 9.55e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 45 MNLGMGMGLDFLSWLMVMLSLWICSLMVMSSLKIKFTSyfsEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLM 124
Cdd:PRK02546 77 LGLTWSVGADGLSMPLILLTGFITTLAVLAAWPVTFKP---KLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 125 LILGWGYQpERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGSLSM----LFLSDWCDS--MYMYISMILAFLVKLPMYMF 198
Cdd:PRK02546 154 LLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFdmtaLAAKDFGLGfqLLCYAGLLIAYGVKLPIVPL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 199 HLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI-MKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSV 277
Cdd:PRK02546 233 HTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 278 AHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERlgSRLFMLNK--GLILYMPSMSLWWFLLSSSNMSA 355
Cdd:PRK02546 313 SHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDR--THTLMLDEmgGVGQKMRKMFAMWTACSLASLAL 390
|
330 340 350
....*....|....*....|....*....|...
gi 2439186388 356 PPSLNLLGEISLLNGLI-SYSYNLTLILFMLSF 387
Cdd:PRK02546 391 PGMSGFVAELMVFVGFAtSDAYTLPFRVVVVFL 423
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
47-399 |
6.05e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 88.78 E-value: 6.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 47 LGMGMGLDFLSWLMVMLSLWICSLMVMSSLKIKFTSyfSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLI 126
Cdd:PRK08375 69 IGIELRADSLSALFLLVTSILAIAALLYAIGYGEHR--QTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 127 LGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEdFCGSLSM-----LFLSDWCDSMYMYIsMILAFLVKLPMYMFHLW 201
Cdd:PRK08375 147 AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYG-VTGTLNMadlagALAENPTVVTAFGF-VLLALALKAAVFPLHTW 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 202 LPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLI----SFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSV 277
Cdd:PRK08375 225 LPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTV 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 278 AHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPP 357
Cdd:PRK08375 305 SQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2439186388 358 SLNLLGEISLLNGLIS-YSYNLTLILFMLSFLSCAYSLYLYSY 399
Cdd:PRK08375 385 TSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
47-326 |
5.99e-16 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 79.76 E-value: 5.99e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 47 LGMGMGLDFLSWLMVMLSlwiCSLMVMSSLKIKFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLI 126
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 127 LGWGYQpERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGSLSMLFLSDWCDS------MYMYISMILAFLVKLPMYMFHL 200
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNlslntqLILLTGLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 201 WLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI-MKLI----SFYSLSLNFYLIIFSLYGgflvSLICMRQVDLKMLIAYS 275
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLRFgLQLFpqtwSLVAPGLAIIGTISVIYG----ALSAIAQKDIKRMVAYS 302
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2439186388 276 SVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSR 326
Cdd:PRK07363 303 SIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTR 353
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
185-386 |
4.70e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 76.93 E-value: 4.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 185 MILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLI-------SFYSLSLNFYLIIFSLYGGFL 257
Cdd:PRK12667 229 ALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIfgispslIDFRAALSPILIILGAVSAII 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 258 VSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILY 337
Cdd:PRK12667 309 GALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRK 388
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2439186388 338 MPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLS 386
Cdd:PRK12667 389 MPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIA 437
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
16-428 |
2.55e-14 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 74.19 E-value: 2.55e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 16 FFNLWWLFFGWLILYFVMLIMSGSFGFLYMNLGMGMGL---DFLSWLMVMLSLWICSlmvmsSLKIKFTSYFSEFYLFII 92
Cdd:MTH00062 3 FFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLfifDSLSFYLILLVLFLGL-----YSQVMFYNLLSGVSRFFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 93 LMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGSLSML-F 171
Cdd:MTH00062 78 FLSLIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSdW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 172 LSDWCDSMYMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISfySLSLNFYLIIFS 251
Cdd:MTH00062 158 GSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIF--SGSFLGYLFLCC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 252 LYG-GFLVSliCMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFML 330
Cdd:MTH00062 236 LFSvFFLIT--ACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 331 NKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISySYNLTLILFMLSFLSCAYSLYLYSY--SQHGVSHSG 408
Cdd:MTH00062 314 LKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG-VLVYLLFWCFYLFFGGLVPLILLGHllIRSESYESI 392
|
410 420
....*....|....*....|
gi 2439186388 409 LYSLCSCYMSEFHLVFLHWF 428
Cdd:MTH00062 393 NVSNYSYLFFLIFLVFWCYL 412
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
53-397 |
2.59e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 71.95 E-value: 2.59e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 53 LDFLSWLMVMLSLWICSLMV--MSSLKIKFTSYFSEFYLfiilMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILgWG 130
Cdd:PRK08668 67 LTHLSWFFAMISLLVIFSVAffMVSEKTKNDAYFNMFAL----MSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVP-MG 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 131 YQPERVSAGVYMIF-----YTLLASLPLLLNLLWLEDFCGSLSMLFLSDWCDSMYMYISMILAF-LVKLPMYMFHLWLPK 204
Cdd:PRK08668 142 KKESRKASLKYFVLsaigaYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPD 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 205 AHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYSLSLNFYLI--------IFSLYGG---FLVSLICMRQVDLKMLIA 273
Cdd:PRK08668 222 AYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYrgvplfnyILAWLGNisiIVGTLMAILQEDIKKLIA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 274 YSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNM 353
Cdd:PRK08668 302 YSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLA 381
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2439186388 354 SAPPSLNLLGEISLLNGLIsySYNLTLILFMLSFLSCAYSLYLY 397
Cdd:PRK08668 382 GIPPMSGFASKWLIFEALI--SKGMPITAFMAFFGSIGSFLYVF 423
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
199-388 |
6.45e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 70.34 E-value: 6.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 199 HLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLI--SFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSS 276
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 277 VAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAP 356
Cdd:PRK06458 314 IEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMP 393
|
170 180 190
....*....|....*....|....*....|..
gi 2439186388 357 PSLNLLGEISLLNGLISYSYNLTLILFMLSFL 388
Cdd:PRK06458 394 PFGVFISEFLILTAGLARGPLLIAILLLLLLT 425
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
89-372 |
1.64e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 66.29 E-value: 1.64e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 89 LFIILMLMFSLyctfcSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGS-- 166
Cdd:PRK08667 119 LFILSMLGVVA-----SANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSfe 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 167 LSMLFLSDWCDSMyMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYSLSLNFY 246
Cdd:PRK08667 194 LSPLGASAGILSL-VFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 247 LIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLV-----------ISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCL 315
Cdd:PRK08667 273 ILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIlmgiglyvifgVYGLDTLALLALGGALFHSLNHALFKSLLFLT 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2439186388 316 SSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLI 372
Cdd:PRK08667 353 AGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
185-397 |
2.89e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 65.16 E-value: 2.89e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 185 MILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYSLSLNF--YLIIFSLYGGFLVSLIC 262
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFsnVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 263 MRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMS 342
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2439186388 343 LWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSLYLY 397
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
187-392 |
8.82e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 8.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 187 LAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLI-----SFYSLSLNFYLIIFSLYGGFLVSLI 261
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVfkanfVFTTLPFNNVFMILAALAIVFGSVL 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 262 CMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSM 341
Cdd:PRK12662 297 AILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKI 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2439186388 342 SLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFML-SFLSCAY 392
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVgSGLSVIY 428
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
93-368 |
1.56e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 56.52 E-value: 1.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 93 LMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLiLGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGSLSMLFL 172
Cdd:PRK12665 118 LILVAGVSNAFLAGDLFNLYVGFEILLVASYVL-LTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 173 SDWCDS------MYMYISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLIsFYSLSLNFY 246
Cdd:PRK12665 197 AVRLDElpsgtrTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLL-FPGGGLDTL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 247 LIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSR 326
Cdd:PRK12665 276 LMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSS 355
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2439186388 327 LFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLL 368
Cdd:PRK12665 356 SLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
165-384 |
2.05e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 56.31 E-value: 2.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 165 GSLSMLFLSDWCDSMYMYI------SMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISF 238
Cdd:PRK08377 186 GTLNMAHIAQLAGTIDPTVaqvglaLLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQN 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 239 YSLSLNF--YLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLS 316
Cdd:PRK08377 266 ANGWSSVlkLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAV 345
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2439186388 317 SIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFM 384
Cdd:PRK08377 346 GYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVL 413
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-102 |
2.88e-08 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 51.37 E-value: 2.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 1 MLKFMLSMLFMIPLSFFNLWWLFFGWLILYFVML------IMSGSFGFLYMNLGMGMGLDFLSWLMVMLSLWICSLMVMS 74
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLallsllLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2439186388 75 SLKI--KFTSYFSEFYLFIILMLMFSLYCT 102
Cdd:pfam01059 81 SQKHlkSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-351 |
1.29e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 53.80 E-value: 1.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 186 ILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRiMKLISFYSLSLnfyLIIFSLYGGFLVSLICMRQ 265
Cdd:PRK07234 191 ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR-CALDVPGLDLI---VRIFGVGTALLGVLFALLE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 266 VDLKMLIAYSSVAHMSLVISGlftmNLWGyygsVFLMVGHGLCSSGLFCLSSIayerLGSRLFmlnKGLILYMPSMSLWW 345
Cdd:PRK07234 267 KDLKRMLAFSTISQLGFILAA----PLVG----GLYALAHGLVKSTLFLCAGA----LPSRNF---TELISQMLGIGKWI 331
|
....*.
gi 2439186388 346 FLLSSS 351
Cdd:PRK07234 332 PLTMAS 337
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
53-360 |
1.80e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 50.10 E-value: 1.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 53 LDFLSWLMVMLSLWICSLMVMSSLK-IKFTSYFSEFYLfIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGY 131
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISyMKHDTGLDKYYT-LILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRND 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 132 QPERVSAGV-YMIFYTLLASLPLLLNLLWLEDFcGSLSMLFLSDWCDSMYMYISMI-LAFLV-----KLPMYMFHLWLPK 204
Cdd:PRK08376 167 TWEAIEAGIkYMFVGSLASSMVLLGIALLYGQY-GTLNMAYLAVKMSENPTVVAKIaLALFIaglamKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 205 AHVEAPIGGSMILagVLLKLGG-YGIIRImkLISFYSLSLN-----FYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVA 278
Cdd:PRK08376 246 AYPAAPSSISAML--LVIKQAGlYALARV--LFSIYGPAINlatvgWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVS 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 279 H---------MSLVISGLFTMNLWGYY---GSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPsMSLWWF 346
Cdd:PRK08376 322 QigymllglgVGLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMP-KTTIAF 400
|
330
....*....|....
gi 2439186388 347 LLSSSNMSAPPSLN 360
Cdd:PRK08376 401 LIGAAAIVGLPPFN 414
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
185-360 |
2.95e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 49.50 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 185 MILAFL---VKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRI-MKLISFYSLSLNFYLIIFSLYGGFLVSL 260
Cdd:PRK06521 213 FLLALFgfgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALGAISAVLGVL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 261 ICMRQVDLKMLIAYSSVAHMSLVI-----------SGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFM 329
Cdd:PRK06521 293 YALAEHDLKRLLAYSTIENIGIIFvglglamvfiaYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDME 372
|
170 180 190
....*....|....*....|....*....|.
gi 2439186388 330 LNKGLILYMPSMSlWWFLLSSSNMSAPPSLN 360
Cdd:PRK06521 373 KLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
22-397 |
3.17e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 49.43 E-value: 3.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 22 LFFGWLILYFVMLIMSGSFGFLYM---NLGMGMGLDFLSWLMVMLS--LWICSLM-VMSSLKIKFTSYFSEFYLFIILML 95
Cdd:PRK06589 47 FFFGNILLIDLLFLKGIRAQFELMdfgNYSIGLHLEPLGLIFLLLIgfLWICALLyTPKYLAINNIDSSSRFLFFFNLTI 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 96 MFSLYCTFcSLSLFSFYLFFEFSLIPTLMLIlGWGYQPERVSAGV-YMIFYTLLASLPLLLNLLWLEDFCGSLSMLFLSD 174
Cdd:PRK06589 127 LIGVLIAL-SSDLFTMFVCYELLTISTAFLI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 175 WCDSMYMYISMILAF-LVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYS-----LSLNFYLI 248
Cdd:PRK06589 205 FSKNQSIILLLMFIYgIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSylqriFAEFNWLI 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 249 IFSLYGGFLVSLICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLF 328
Cdd:PRK06589 285 FIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQV 364
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2439186388 329 MLNKGLILYMPSMSLWWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSLYLY 397
Cdd:PRK06589 365 DKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIASSILSALY 433
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
87-396 |
1.41e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 47.44 E-value: 1.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 87 FYLFIILmLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLILGWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEDFCGS 166
Cdd:PRK12646 112 FYFYLTL-FMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 167 ---LSMLFLSDWCDSMYMYISMILAFLV----KLPMYMFHLWLPKAhVEAPIGGSMIL-AGVLLKLGGYGIIR---IMKL 235
Cdd:PRK12646 191 nniTEILGQADHIKNHGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRftpLLGL 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 236 ISFYSLSLNFYLIIFSLYGgflvSLICMRQVDLKMLIAYSSVAHMSLVIS-----GLFTMNLWGYYGSVFLMV------- 303
Cdd:PRK12646 270 SNMYIYIVTFVGLITMLFG----SITALKQWDLKGILAYSTISQLGMIMAmvgigGGYAQHQQDAIASIYVFVlfaalfh 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 304 --GHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLwWFLLSSSNMSAPPSLN-LLGEISLLNGLISY----SY 376
Cdd:PRK12646 346 lmNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDALTQTgqlsQF 424
|
330 340
....*....|....*....|....*.
gi 2439186388 377 NLTLILFML------SFLSCAYSLYL 396
Cdd:PRK12646 425 SLISMIIIVfigviaSIFTFTYALYM 450
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
185-394 |
3.89e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 45.71 E-value: 3.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 185 MILAFLVKLPMYMFHlWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYSLSLNFYLIIFSLYGGFLV-SLICM 263
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIgALGAL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 264 RQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSL 343
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2439186388 344 WWFLLSSSNMSAPPSLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSL 394
Cdd:PRK12663 372 LFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSL 422
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-394 |
3.10e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 43.01 E-value: 3.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 48 GMGMGLDFLSWLMVMLSLWICSLMVMSSLKIKFTSYFSEFYLFIILMLMFSLYCTFCSLSLFSFYLFFEFSLIPTLMLIL 127
Cdd:PRK07691 70 GIVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 128 GWGYQPERVSAGVYMIFYTLLASLPLLLNLLWLEdFCGSLSMLFLS------DWCDSMYMYISMILAFLV---KLPMYMF 198
Cdd:PRK07691 150 IGGTKIQLRESIKYVLINVVSSAFFVVAVAILYS-VVGTLNMADISvkiaelSAGQTGLITVVAILFLFVfatKAGLFPL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 199 HLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYSLSLNFYLIIF-SLYGGFLVSLICMRQVDLKMLIAYSSV 277
Cdd:PRK07691 229 YFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILIlALLTIIFGVIGAVAYFDIKKIIIYNIM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 278 AHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLWWFLLSSSNMSAPP 357
Cdd:PRK07691 309 IAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPP 388
|
330 340 350
....*....|....*....|....*....|....*..
gi 2439186388 358 SLNLLGEISLLNGLISYSYNLTLILFMLSFLSCAYSL 394
Cdd:PRK07691 389 LSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
198-366 |
9.88e-04 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 41.57 E-value: 9.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 198 FHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYSLsLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSV 277
Cdd:PRK12650 227 FHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAV-WNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTV 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 278 AHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPsMSLWWFLLSSSNMSA-P 356
Cdd:PRK12650 306 SQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTIAALSMAAvP 384
|
170
....*....|
gi 2439186388 357 PslnLLGEIS 366
Cdd:PRK12650 385 P---LFGFVS 391
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
199-360 |
1.57e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.97 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 199 HLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLISFYSLSLNFYLIIFSLYGGFLVSLICMRQVDLKMLIAYSSVA 278
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 279 HMSLVISGLF-----------TMNLWGYYGSVFLMVGHGLCSSGLFCLSSIAYERLGSRLFMLNKGLILYMPSMSLwWFL 347
Cdd:PRK08042 280 NIGIILLGLGagvtgialeqpALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISI-AML 358
|
170
....*....|...
gi 2439186388 348 LSSSNMSAPPSLN 360
Cdd:PRK08042 359 VGLMAMAALPPLN 371
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
183-313 |
3.04e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 39.93 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2439186388 183 ISMILAFLVKLPMYMFHLWLPKAHVEAPIGGSMILAGVLLKLGGYGIIRIMKLIsFYSLSLNFYLIIF--SLYGGFLVSL 260
Cdd:TIGR01770 207 VLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYI-LFGFSEAWQIFLAiiAFLSMLIGNF 285
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2439186388 261 ICMRQVDLKMLIAYSSVAHMSLVISGLFTMNLWGYYGSVFLMVGHGLCSSGLF 313
Cdd:TIGR01770 286 GALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| |
