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Conserved domains on  [gi|2450776219|gb|WDY85194|]
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ATP synthase F0 subunit a (mitochondrion) [Hypnea pseudomusciformis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 8-248 5.26e-51

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


:

Pssm-ID: 273458  Cd Length: 226  Bit Score: 165.84  E-value: 5.26e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219   8 PLEQFEIvaliplnIGGINFSLTNSSLFLIIAFFLIIFWTNlsfYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYY 87
Cdd:TIGR01131   1 LFSQFDI-------SPITLFSLTLLSLILLLSLLIFLISSS---LSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKF 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  88 LPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLS 167
Cdd:TIGR01131  71 FPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETIS 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 168 YIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGGLLAVFHIIplgllLALIGLELAIAGLQAYVFTLLTCIYLNDV 247
Cdd:TIGR01131 151 YLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLIL-----VALIILEIFVAFIQAYVFTLLTCLYLNDA 225


                  .
gi 2450776219 248 L 248
Cdd:TIGR01131 226 L 226
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 8-248 5.26e-51

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 165.84  E-value: 5.26e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219   8 PLEQFEIvaliplnIGGINFSLTNSSLFLIIAFFLIIFWTNlsfYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYY 87
Cdd:TIGR01131   1 LFSQFDI-------SPITLFSLTLLSLILLLSLLIFLISSS---LSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKF 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  88 LPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLS 167
Cdd:TIGR01131  71 FPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETIS 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 168 YIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGGLLAVFHIIplgllLALIGLELAIAGLQAYVFTLLTCIYLNDV 247
Cdd:TIGR01131 151 YLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLIL-----VALIILEIFVAFIQAYVFTLLTCLYLNDA 225


                  .
gi 2450776219 248 L 248
Cdd:TIGR01131 226 L 226
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 10-251 3.32e-50

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 164.41  E-value: 3.32e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  10 EQFEIVAL--IPLNIGGINFSLTNSSLFLIIAffLIIFWtnLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYY 87
Cdd:MTH00175    7 DQFNIIRLitIQAFLGDWLVTFTNSSMMMVLA--VIIFW--LLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKY 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  88 LPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLS 167
Cdd:MTH00175   83 FPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLS 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 168 YIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGglLAVFHIIPLGLLLALIGLELAIAGLQAYVFTLLTCIYLNDV 247
Cdd:MTH00175  163 YLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNG--LIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240


                  ....
gi 2450776219 248 LDMH 251
Cdd:MTH00175  241 IALH 244
ATP-synt_A pfam00119
ATP synthase A chain;
36-245 4.92e-42

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 142.63  E-value: 4.92e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  36 LIIAFFLIIFWTNLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRK-GEYYLPFIFTLHLMLLYSNLIGMV---PYSF 111
Cdd:pfam00119   5 LIVALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 112 TVTSHIVFTFSLALAIFIGINIIGVQTHGFK-FFALFLPRGVPLAIVPLLVSIEFLSYIVKVFTLSIRLFANMTSGHTLL 190
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHGLGgYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2450776219 191 KIIAGFAWTMLSAGGLLAVFHIIplgLLLALIGLELAIAGLQAYVFTLLTCIYLN 245
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPL---LGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 84-245 7.21e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 140.23  E-value: 7.21e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  84 GEYYLPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSI 163
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 164 EFLSYIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGGLLAVFHIIPlglllaLIGLELAIAGLQAYVFTLLTCIY 243
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVA------LTLLELFVAFIQAYVFTLLTAVY 154


                  ..
gi 2450776219 244 LN 245
Cdd:cd00310   155 IS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 31-249 1.86e-40

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 138.28  E-value: 1.86e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  31 NSSLFLIIAFFLIIFWTNLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLLYSNLIGMVPYS 110
Cdd:COG0356     1 DTVLMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 111 FTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFA--LFLPRGVPLAivPLLVSIEFLSYIVKVFTLSIRLFANMTSGHT 188
Cdd:COG0356    81 FPPTADINVTLALALIVFVLVHYYGIKKKGLGGYLkhLFFPPFPWLA--PLMLPIEIISELARPLSLSLRLFGNMFAGHI 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2450776219 189 LLKIIAGFAWTMLSAGG------LLAVFHIIplglllaliglelaIAGLQAYVFTLLTCIYLNDVLD 249
Cdd:COG0356   159 ILLLLAGLAPFLLLGVLslllpvAWTAFELL--------------VGFLQAYIFTMLTAVYISLAVE 211
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 8-248 5.26e-51

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 165.84  E-value: 5.26e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219   8 PLEQFEIvaliplnIGGINFSLTNSSLFLIIAFFLIIFWTNlsfYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYY 87
Cdd:TIGR01131   1 LFSQFDI-------SPITLFSLTLLSLILLLSLLIFLISSS---LSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKF 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  88 LPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLS 167
Cdd:TIGR01131  71 FPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETIS 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 168 YIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGGLLAVFHIIplgllLALIGLELAIAGLQAYVFTLLTCIYLNDV 247
Cdd:TIGR01131 151 YLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLIL-----VALIILEIFVAFIQAYVFTLLTCLYLNDA 225


                  .
gi 2450776219 248 L 248
Cdd:TIGR01131 226 L 226
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 10-251 3.32e-50

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 164.41  E-value: 3.32e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  10 EQFEIVAL--IPLNIGGINFSLTNSSLFLIIAffLIIFWtnLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYY 87
Cdd:MTH00175    7 DQFNIIRLitIQAFLGDWLVTFTNSSMMMVLA--VIIFW--LLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKY 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  88 LPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLS 167
Cdd:MTH00175   83 FPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLS 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 168 YIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGglLAVFHIIPLGLLLALIGLELAIAGLQAYVFTLLTCIYLNDV 247
Cdd:MTH00175  163 YLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNG--LIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240


                  ....
gi 2450776219 248 LDMH 251
Cdd:MTH00175  241 IALH 244
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 10-251 1.70e-45

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 152.12  E-value: 1.70e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  10 EQFEIVALIPLnigginfslTNSSLFLIIAFFLIIfwtnLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLP 89
Cdd:MTH00172    7 DQFNIVWLIGL---------TNSSIMMILVIIVVL----LLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFP 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  90 FIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLSYI 169
Cdd:MTH00172   74 FIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYI 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 170 VKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGGLLAVFhiiPLGLLLALIGLELAIAGLQAYVFTLLTCIYLNDVLD 249
Cdd:MTH00172  154 SRAISLGVRLAANLSAGHLLFAILAGFGFNMLCASGFLSLF---PLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTIV 230


                  ..
gi 2450776219 250 MH 251
Cdd:MTH00172  231 LH 232
ATP-synt_A pfam00119
ATP synthase A chain;
36-245 4.92e-42

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 142.63  E-value: 4.92e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  36 LIIAFFLIIFWTNLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRK-GEYYLPFIFTLHLMLLYSNLIGMV---PYSF 111
Cdd:pfam00119   5 LIVALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKkGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 112 TVTSHIVFTFSLALAIFIGINIIGVQTHGFK-FFALFLPRGVPLAIVPLLVSIEFLSYIVKVFTLSIRLFANMTSGHTLL 190
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHGLGgYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2450776219 191 KIIAGFAWTMLSAGGLLAVFHIIplgLLLALIGLELAIAGLQAYVFTLLTCIYLN 245
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPL---LGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 84-245 7.21e-42

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 140.23  E-value: 7.21e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  84 GEYYLPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSI 163
Cdd:cd00310     1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 164 EFLSYIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGGLLAVFHIIPlglllaLIGLELAIAGLQAYVFTLLTCIY 243
Cdd:cd00310    81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVA------LTLLELFVAFIQAYVFTLLTAVY 154


                  ..
gi 2450776219 244 LN 245
Cdd:cd00310   155 IS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 31-249 1.86e-40

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 138.28  E-value: 1.86e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  31 NSSLFLIIAFFLIIFWTNLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLLYSNLIGMVPYS 110
Cdd:COG0356     1 DTVLMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 111 FTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFA--LFLPRGVPLAivPLLVSIEFLSYIVKVFTLSIRLFANMTSGHT 188
Cdd:COG0356    81 FPPTADINVTLALALIVFVLVHYYGIKKKGLGGYLkhLFFPPFPWLA--PLMLPIEIISELARPLSLSLRLFGNMFAGHI 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2450776219 189 LLKIIAGFAWTMLSAGG------LLAVFHIIplglllaliglelaIAGLQAYVFTLLTCIYLNDVLD 249
Cdd:COG0356   159 ILLLLAGLAPFLLLGVLslllpvAWTAFELL--------------VGFLQAYIFTMLTAVYISLAVE 211
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 18-251 5.57e-38

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 132.61  E-value: 5.57e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  18 IPLNIGGINFSLTNSSLFLIIAFFLIIFWtnLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLM 97
Cdd:PRK05815    5 LIIGFGGFNFDSLLLSVLLGVLILLLFAL--VATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  98 LLYSNLIGMVP-YSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFK-FFALFLPrgvplAIVPLLVSIEFLSYIVKVFTL 175
Cdd:PRK05815   83 ILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKGLGgYLKEFYL-----QPHPLLLPIEIISEFSRPISL 157

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2450776219 176 SIRLFANMTSGHTLLKIIAGFawtmlsaGGLLAVFHIIPLGLLLALIGLELAIAGLQAYVFTLLTCIYLNDVLDMH 251
Cdd:PRK05815  158 SLRLFGNMLAGELILALIALL-------GGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 4-251 3.11e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 123.51  E-value: 3.11e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219   4 IITSPLEQFEIVALIPLNIGGINFSLTN-----SSLFLIIAFFLIIFWT-NLSFYNLNLIPNNWQLIKESLYKVTSSIVE 77
Cdd:MTH00174    1 MVAAYFDQFNIIPIFSIWVYFLSFWINGeffcfTNTFFMMSFAVFLFYTiGAKGNNNTLVPNRILVGLELIYSHFYTVLK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  78 DNIGRKGEYYLPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIV 157
Cdd:MTH00174   81 DNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 158 PLLVSIEFLSYIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGGLLAVFhiIPLGLLLALIGLELAIAGLQAYVFT 237
Cdd:MTH00174  161 PLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSF--VPFAILIFVTILEMAVAIIQAYVFT 238

                         250
                  ....*....|....
gi 2450776219 238 LLTCIYLNDVLDMH 251
Cdd:MTH00174  239 LLTIVYLRDTVELH 252
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 26-247 4.58e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 96.01  E-value: 4.58e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  26 NFSLTNSSLFLIIAFFLIIFWtnlsfynlnLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLLYSNLIG 105
Cdd:MTH00157   16 NLSLNWLSTFLGLLFIPSSFW---------LIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLG 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 106 MVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLSYIVKVFTLSIRLFANMTS 185
Cdd:MTH00157   87 LFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIA 166

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2450776219 186 GHTLLkiiagfawTMLSAGGLLAVFHIIPLGLLLALIGLE--LAIAGLQAYVFTLLTCIYLNDV 247
Cdd:MTH00157  167 GHLLL--------TLLGNTGPSLSSMILSILILIQILLLIleSAVAIIQSYVFSVLSTLYSSEV 222
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 24-248 7.47e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 95.48  E-value: 7.47e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  24 GINFSLTNSSLFLIIAFFLIIFWTNLSFYnlnLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLLYSNL 103
Cdd:MTH00176   11 PPNKNIFSMISLSWITLLLFLLLMPSSVW---FCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFILVMSLNL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 104 IGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLSYIVKVFTLSIRLFANM 183
Cdd:MTH00176   88 SGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANL 167

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2450776219 184 TSGHTLLKIIAGFAWTMLSAGGLLAVFHIIPlglLLALIGLELAIAGLQAYVFTLLTCIYLNDVL 248
Cdd:MTH00176  168 SAGHLLLGLLGAAMWGLLPVSPLIGFLLLIV---QILYFMFEIAVCMIQAYVFTLLLSLYLDEHP 229
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 27-246 8.47e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 90.31  E-value: 8.47e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  27 FSLTNSSLFLIIAFFLIIFWTNLSFyNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLLYSNLIGM 106
Cdd:MTH00173   12 HNSSFSSLSFLMWLLSLMSLFFFSS-SVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLISLNLSGL 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 107 VPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLSYIVKVFTLSIRLFANMTSG 186
Cdd:MTH00173   91 LPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAG 170

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 187 HTLLKIIAGFAWTMLSAGGLLAVFHIIplGLLLALIGLELAIAGLQAYVFTLLTCIYLND 246
Cdd:MTH00173  171 HIVLTLIGNYLSSSLFSSSVVSLLLVL--LIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 9-244 5.44e-21

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 90.19  E-value: 5.44e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219   9 LEQFEIVALIPLNIGGINFSLTNSSLFLII--AFFLIIFWTNLSFYNL---NLIPNNWQLIKESLYK-VTSSIVEDNIGR 82
Cdd:PRK13419   86 FEPFGEVHLPKLVVGGFDISITKHVVMMWIasAILLVVFLAAGRKYKKmtkSQAPKGLANAMEALVEfIRLDVAKSNIGH 165

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  83 KGEYYLPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVS 162
Cdd:PRK13419  166 GYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWIIMIP 245

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 163 IEFLSYIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAggLLAVFHIIPlgLLLALIGLELAIAGLQAYVFTLLTCI 242
Cdd:PRK13419  246 IEFIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILKSY--IVAVAVSVP--FAIFIYLLELFVAFLQAYIFTMLSAL 321


                  ..
gi 2450776219 243 YL 244
Cdd:PRK13419  322 FI 323
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 35-245 9.28e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 87.31  E-value: 9.28e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  35 FLIIAFFLIIFWTNLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLLYSNLIGMVPYSFTVT 114
Cdd:MTH00179   17 IPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFTPT 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 115 SHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLSYIVKVFTLSIRLFANMTSGHTLLKIIA 194
Cdd:MTH00179   97 TQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLIS 176

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2450776219 195 GFAWTMLSAGGLLAvfhIIPLGLLLALIGLELAIAGLQAYVFTLLTCIYLN 245
Cdd:MTH00179  177 SAVFVLMNFMGMVA---LLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQ 224
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 27-246 1.11e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 87.10  E-value: 1.11e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  27 FSLTNSSLFLIIAFfLIIFWTNLSFYnlnLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLLYSNLIGM 106
Cdd:MTH00005   17 FNNLSSTAFWAFNF-SIILLLSSSFW---ITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 107 VPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLSYIVKVFTLSIRLFANMTSG 186
Cdd:MTH00005   93 LPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAG 172

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 187 HTLLKIIAGFAWTMLSAGGLLAVFHIIplgLLLALIGLELAIAGLQAYVFTLLTCIYLND 246
Cdd:MTH00005  173 HIVLSLIGIYAASALFSSISSTILLIL---TQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 36-246 3.40e-19

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 83.08  E-value: 3.40e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  36 LIIAFFLIIFWTNLsfynlNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLLYSNLIGMVPYSFTVTS 115
Cdd:MTH00101   22 LIIMFPSLLFPTPN-----RLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTNLLGLLPHSFTPTT 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 116 HIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLSYIVKVFTLSIRLFANMTSGHTLLKIIAG 195
Cdd:MTH00101   97 QLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGG 176

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2450776219 196 FAWTMLSAGGLLAvfhIIPLGLLLALIGLELAIAGLQAYVFTLLTCIYLND 246
Cdd:MTH00101  177 ATLALMSISTTTA---LITFIILILLTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-244 8.23e-19

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 82.33  E-value: 8.23e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219   3 NIITSPLEQF--EIVALIPLNIgginfsltnsslfliIAFFLIIFWTNLSfYNLNLIPNNWQLIKESLYKVTSSIVEDNI 80
Cdd:MTH00035    2 IINNSIFGQFspDTILFIPLTL---------------LSSVIALSWLFFI-NPTNWLPSRSQSIWLTFRQEILKLIFQNT 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  81 GRKGEYYLPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLL 160
Cdd:MTH00035   66 NPNTAPWAGLLTTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLM 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 161 VSIEFLSYIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAggllAVFHIIPLGLLLALIGLELAIAGLQAYVFTLLT 240
Cdd:MTH00035  146 VWIETLSLFAQPIALGLRLAANLTAGHLLIFLLSTAIWELSNS----PLISIITLIIFFLLFILEIGVACIQAYVFTALV 221


                  ....
gi 2450776219 241 CIYL 244
Cdd:MTH00035  222 HFYL 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 94-244 9.02e-16

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 73.75  E-value: 9.02e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  94 LHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLSYIVKVF 173
Cdd:MTH00132   76 LMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPL 155

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2450776219 174 TLSIRLFANMTSGHTLLKIIAGFAWTMLSaggLLAVFHIIPLGLLLALIGLELAIAGLQAYVFTLLTCIYL 244
Cdd:MTH00132  156 ALGVRLTANLTAGHLLIQLIATAAFVLLP---LMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 83-244 2.49e-15

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 72.55  E-value: 2.49e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  83 KGEYYLPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVS 162
Cdd:MTH00120   65 KGHKWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALIL 144

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 163 IEFLSYIVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSAGGLLAvfhIIPLGLLLALIGLELAIAGLQAYVFTLLTCI 242
Cdd:MTH00120  145 IETISLLIRPLALGVRLTANLTAGHLLIQLISTATLNLLPTMPTLS---LLTLIILLLLTILELAVAMIQAYVFVLLLSL 221


                  ..
gi 2450776219 243 YL 244
Cdd:MTH00120  222 YL 223
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 90-244 2.24e-14

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 70.00  E-value: 2.24e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  90 FIFT-LHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFLSY 168
Cdd:MTH00073   71 LILTsLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISL 150

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2450776219 169 IVKVFTLSIRLFANMTSGHTLLKIIAGFAWTMLSaggLLAVFHIIPLGLLLALIGLELAIAGLQAYVFTLLTCIYL 244
Cdd:MTH00073  151 FIRPLALGVRLTANLTAGHLLIQLISTATLVLLP---LMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYL 223
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 75-251 6.85e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 67.22  E-value: 6.85e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  75 IVEDNIGRKGEYYLPFIFTLHLMLLYSNLIGMVPY-----------------------------------SFTVTSHIVF 119
Cdd:PRK13417  145 IVDESMHGHGHSYYHYIFTLFFFILFCNLMGLVPSvgeltvvasdygglvalgvmdhtphalptfakvwsGITVTGDISV 224

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 120 TFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLLVSIEFL-SYIVKVFTLSIRLFANMTSGHTLLKIIAGFAW 198
Cdd:PRK13417  225 TMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILALMGFIF 304

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2450776219 199 TMLSAGGLLavfhiIPLGLLLALIGLELAIAGLQAYVFTLLTCIYLNDVLDMH 251
Cdd:PRK13417  305 QFQSWGIVP-----VSVIGSGLIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH 352
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 20-244 3.41e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 61.30  E-value: 3.41e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  20 LNIGGINFSLTNSSLFLIIAFFLIIFWtnLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLL 99
Cdd:PRK13420    9 FHIGPLPITESVLTTWGIMIVLVLASW--LTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 100 YSNLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLprgvpLAIVPLLVSIEFLSYIVKVFTLSIRL 179
Cdd:PRK13420   87 VANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEGLREYLKHY-----LSPSPFLLPFHLISEITRTLALAVRL 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2450776219 180 FANMTS---GHTLLKIIAGFawtmLSAGGLLaVFHIIPlglllaliglelaiAGLQAYVFTLLTCIYL 244
Cdd:PRK13420  162 FGNIMSlelAALLVLLVAGF----LVPVPIL-MLHIIE--------------ALVQAYIFGMLALIYI 210
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 53-244 2.18e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 53.16  E-value: 2.18e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  53 NLNLIPNNWQLIKESLYKVTSSIVEDNIGRKGEYYLPFIFTLHLMLLYSNLIGMVPYSFTVTSHIVFTFSLALAIFIGIN 132
Cdd:PRK13421   43 RLSLAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIGTLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATI 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219 133 IIGVQTHGFK-FFALFLPRgvplaiVPLLVSIEFLSYIVKVFTLSIRLFANMTSGHTLLKIIagfawtmLSAGGLLAVfh 211
Cdd:PRK13421  123 YYGVRARGVRgYLATFAEP------TWVMIPLNLVEQLTRTFSLIVRLFGNVMSGVFVIGIV-------LSLAGLLVP-- 187

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2450776219 212 iIPLGLLLALIglelaiAGLQAYVFTLLTCIYL 244
Cdd:PRK13421  188 -IPLMALDLLT------GAVQAYIFAVLAMVFI 213
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 81-186 3.56e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 42.95  E-value: 3.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  81 GRKGEYYLPFIFTLHLMLLysnLIGMVPYSFTVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPRGVPLAIVPLL 160
Cdd:MTH00050   19 GGSVSYYYSVVLFIVLFLF---LLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFV 95

                          90       100
                  ....*....|....*....|....*.
gi 2450776219 161 VSIEFLSYIVKVFTLSIRLFANMTSG 186
Cdd:MTH00050   96 CIAETISYIIRPVVLILRPFINISLG 121
atpI CHL00046
ATP synthase CF0 A subunit
 36-182 1.00e-03

ATP synthase CF0 A subunit


Pssm-ID: 176987  Cd Length: 228  Bit Score: 39.15  E-value: 1.00e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2450776219  36 LIIAFFLIIFWtnLSFYNLNLIPNNWQLIKESLYKVTSSIVEDNIGRKgEY--YLPFIFTLHLMLLYSNLIG-MVPYSF- 111
Cdd:CHL00046   31 VVIAILLGSAL--LATRNLQTIPTGGQNFFEYVLEFIRDLAKTQIGEE-EYrpWVPFIGTMFLFIFVSNWSGaLLPWKLi 107

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2450776219 112 --------TVTSHIVFTFSLALAIFIGINIIGVQTHGFKFFALFLPrgvPLaivPLLVSIEFLSYIVKVFTLSIRLFAN 182
Cdd:CHL00046  108 elphgelaAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFGKYIQ---PT---PILLPINILEDFTKPLSLSFRLFGN 180
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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