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Conserved domains on  [gi|2458278078|gb|WEL32775|]
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NADH dehydrogenase subunit 3 (mitochondrion) [China mantispoides]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009596)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 10-115 2.54e-38

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.50  E-value: 2.54e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTMNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWW 89
Cdd:MTH00161    8 IILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSW 87

                          90       100
                  ....*....|....*....|....*.
gi 2458278078  90 TMSMYVFIMILLIGTYFEWKQGALQW 115
Cdd:MTH00161   88 LITSSFFILILLLGLYYEWNQGALEW 113
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 10-115 2.54e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.50  E-value: 2.54e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTMNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWW 89
Cdd:MTH00161    8 IILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSW 87

                          90       100
                  ....*....|....*....|....*.
gi 2458278078  90 TMSMYVFIMILLIGTYFEWKQGALQW 115
Cdd:MTH00161   88 LITSSFFILILLLGLYYEWNQGALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 6.52e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 92.49  E-value: 6.52e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  19 MIMSSVISKKTmNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKwSSMWWWTMSMYVFIM 98
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 2458278078  99 ILLIGTYFEWKQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 10-115 3.56e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.02  E-value: 3.56e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTMNdREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKwSSMWWW 89
Cdd:COG0838    14 VALGLALAMLLLSRLLGPKRPN-PEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFR-ELGWFG 91

                          90       100
                  ....*....|....*....|....*.
gi 2458278078  90 TMSMYVFIMILLIGTYFEWKQGALQW 115
Cdd:COG0838    92 LIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 10-115 2.54e-38

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 124.50  E-value: 2.54e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTMNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWW 89
Cdd:MTH00161    8 IILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSW 87

                          90       100
                  ....*....|....*....|....*.
gi 2458278078  90 TMSMYVFIMILLIGTYFEWKQGALQW 115
Cdd:MTH00161   88 LITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 10-116 1.45e-36

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 120.35  E-value: 1.45e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTMNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWW 89
Cdd:MTH00148   10 FALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWS 89

                          90       100
                  ....*....|....*....|....*..
gi 2458278078  90 TMSMYVFIMILLIGTYFEWKQGALQWT 116
Cdd:MTH00148   90 LTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 12-115 1.14e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 115.47  E-value: 1.14e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  12 FIVPMIIMIMSSVISKKTMNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWWTM 91
Cdd:MTH00202   12 ILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLL 91

                          90       100
                  ....*....|....*....|....
gi 2458278078  92 SMYVFIMILLIGTYFEWKQGALQW 115
Cdd:MTH00202   92 GGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 10-116 6.93e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 101.09  E-value: 6.93e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTMNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWW 89
Cdd:MTH00012   10 ISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTV 89

                          90       100
                  ....*....|....*....|....*..
gi 2458278078  90 TMSMYVFIMILLIGTYFEWKQGALQWT 116
Cdd:MTH00012   90 VYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 32-117 1.21e-26

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 95.05  E-value: 1.21e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  32 DREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWWTMSMYVFIMILLIGTYFEWKQG 111
Cdd:MTH00042   31 DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLITNPSTLLPISLIFLIILTIGLVYEWVNG 110


                  ....*.
gi 2458278078 112 ALQWTD 117
Cdd:MTH00042  111 GLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 6.52e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 92.49  E-value: 6.52e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  19 MIMSSVISKKTmNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKwSSMWWWTMSMYVFIM 98
Cdd:pfam00507   1 LLLSRLLGPKR-PNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 2458278078  99 ILLIGTYFEWKQGALQ 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 10-115 9.80e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 92.65  E-value: 9.80e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTMN---DREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMkwSSM 86
Cdd:MTH00203    6 LFFLIALLLSLILLFIAFWLPKvnpDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN--QLS 83

                          90       100
                  ....*....|....*....|....*....
gi 2458278078  87 WWWTMSMYVFIMILLIGTYFEWKQGALQW 115
Cdd:MTH00203   84 SLSLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 34-117 4.80e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 91.15  E-value: 4.80e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  34 EKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWWTMSMYVFIMILLIGTYFEWKQGAL 113
Cdd:MTH00106   32 EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALSLAYEWTQKGL 111


                  ....
gi 2458278078 114 QWTD 117
Cdd:MTH00106  112 EWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 10-115 1.38e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 89.98  E-value: 1.38e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKktMN-DREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPI---------II 79
Cdd:MTH00136   10 ITIALSLILAIVSFWLPQ--MTpDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLpwgdqlpspLL 87

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2458278078  80 TMKWSSMwwwtmsmyvfIMILL-IGTYFEWKQGALQW 115
Cdd:MTH00136   88 TFFWATA----------VLILLtLGLIYEWLQGGLEW 114
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 10-115 3.56e-24

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 89.02  E-value: 3.56e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTMNdREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKwSSMWWW 89
Cdd:COG0838    14 VALGLALAMLLLSRLLGPKRPN-PEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFR-ELGWFG 91

                          90       100
                  ....*....|....*....|....*.
gi 2458278078  90 TMSMYVFIMILLIGTYFEWKQGALQW 115
Cdd:COG0838    92 LIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 10-116 2.18e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 86.86  E-value: 2.18e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKkTMNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWW 89
Cdd:MTH00113    9 ISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINLTTPTTT 87

                          90       100
                  ....*....|....*....|....*..
gi 2458278078  90 TMSMYVFIMILLIGTYFEWKQGALQWT 116
Cdd:MTH00113   88 LTWATIILTLLTLGLIYEWLQGGLEWA 114
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 10-116 5.11e-23

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 86.07  E-value: 5.11e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTmNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKwSSMWWW 89
Cdd:PRK06602   17 VAIGLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFR-EIGWLG 94

                          90       100
                  ....*....|....*....|....*..
gi 2458278078  90 TMSMYVFIMILLIGTYFEWKQGALQWT 116
Cdd:PRK06602   95 FVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 16-115 3.64e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 83.89  E-value: 3.64e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  16 MIIMIMSSVISK---------KTMN-DREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPiiitMKWSS 85
Cdd:MTH00069    3 MLMLLISTILSLilitisfwlPLNNpDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLP----TPWAS 78

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2458278078  86 MWWWTMSMYVF---IMILL-IGTYFEWKQGALQW 115
Cdd:MTH00069   79 QLNTPTNTLFWstlILILLtLGLIYEWIQGGLEW 112
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 10-115 2.26e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 73.94  E-value: 2.26e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTmNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMW-W 88
Cdd:MTH00018    9 FSVVLSALFSGASYFLGVKQ-PDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFgF 87

                          90       100
                  ....*....|....*....|....*..
gi 2458278078  89 WTmsMYVFIMILLIGTYFEWKQGALQW 115
Cdd:MTH00018   88 WT--MVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 12-115 2.48e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 73.98  E-value: 2.48e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  12 FIVPMIIMIMSSVISKKT------MNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMP-IIITMKWS 84
Cdd:MTH00055    9 FILLLFSIGLSTVISGASyivgvkQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPwCVVYNQIG 88

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2458278078  85 SMWWWTmsMYVFIMILLIGTYFEWKQGALQW 115
Cdd:MTH00055   89 LFGFWV--MYLFLIILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 29-115 4.21e-14

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 63.41  E-value: 4.21e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  29 TMNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWWTMsMYVFIMILLIGTYFEW 108
Cdd:MTH00030   37 TKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWI-VYTFLIVLAIGLAYEW 115


                  ....*..
gi 2458278078 109 KQGALQW 115
Cdd:MTH00030  116 IKGGLEW 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
10-115 2.02e-11

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 56.60  E-value: 2.02e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTMN---DREKSSPFECGFDPkTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSm 86
Cdd:PRK08489   19 LTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEP-VKQPNRISSHFYIMALLFILFDVEIVFMFPWAVDFKLLG- 96

                          90       100
                  ....*....|....*....|....*....
gi 2458278078  87 WWWTMSMYVFIMILLIGTYFEWKQGALQW 115
Cdd:PRK08489   97 LFGLIEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
32-115 1.73e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 51.28  E-value: 1.73e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  32 DREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMwWWTMSMYVFIMILLIGTYFEWKQG 111
Cdd:PRK07756   39 SAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGL-FALIEMLIFVVMLLVGLAYAWKKK 117


                  ....
gi 2458278078 112 ALQW 115
Cdd:PRK07756  118 VLQW 121
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 19-116 1.32e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 48.90  E-value: 1.32e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  19 MIMSSVISKKTMNdREKSSPFECGFDPKTSARMP--FSLRFFMIAVIFLIFDVEIALIMPIIITMKwSSMWWWTMSMYVF 96
Cdd:PRK07928   22 VVVASLVGPKRYN-RAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFD-ALGVFGLVEMALF 99

                          90       100
                  ....*....|....*....|
gi 2458278078  97 IMILLIGTYFEWKQGALQWT 116
Cdd:PRK07928  100 MLTVFVAYAYVWRRGGLEWD 119
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 12-116 6.34e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 44.50  E-value: 6.34e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  12 FIVPMIIMIMSSVISKK-TMNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWWt 90
Cdd:MTH00060   13 LLFLVIYFFHSGLWNNKiYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQGLLFYNFWY- 91

                          90       100
                  ....*....|....*....|....*.
gi 2458278078  91 msMYVFIMILLIGTYFEWKQGALQWT 116
Cdd:MTH00060   92 --YYFFLLLLFLGFVVELFSGYVRWV 115
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 10-116 2.35e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 40.26  E-value: 2.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278078  10 ITFIVPMIIMIMSSVISKKTmNDREKSSPFECGFDPKTSARMPFSLRFFMIAVIFLIFDVEIALIMPIIITMKWSSMWWW 89
Cdd:MTH00092   10 FTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSDFSSLISFF 88

                          90       100
                  ....*....|....*....|....*..
gi 2458278078  90 TMSMYVFimillIGTYFEWKQGALQWT 116
Cdd:MTH00092   89 MLMIFIF-----FGFYMEWWYGKLIWV 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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