|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 656.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 12 IKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 92 FVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 172 DNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLLSMTEPYML 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 252 GDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPINQIMFWMLLV 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 2458278099 332 LMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFIIN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-365 |
1.49e-119 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 351.79 E-value: 1.49e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 12 IKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 92 FVCIYLHVGRGIYYGSYMY-KE-TWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGF 169
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKpRElNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 170 AVDNATLNRFFTFH-FIMPFIIMMMSMIHLMFLHQNGSNNPMG----LNSNVDKIPFHPYFTFKDTITFLLIIVNLMLLS 244
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 245 MTEPymLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPIN 322
Cdd:COG1290 260 FFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2458278099 323 QIMFWMLLVLMMLLTWIGKRPveEPYITVGQLLTIMYFSYFII 365
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
3.65e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 259.61 E-value: 3.65e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 10 PMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 90 LFFVCIYLHVGRGIYYGSYM--YKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2458278099 168 GFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
6.29e-78 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 238.05 E-value: 6.29e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 19 LIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLFFVCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 99 VGRGIYYG--SYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2458278099 177 NRFFTFHFIMPFIIMMMSMIHLMFLHQNG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
243-312 |
3.20e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 58.27 E-value: 3.20e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 243 LSMTEPYMLGDPdnfmpANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSN 312
Cdd:TIGR01156 54 LAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVN 118
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 656.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 12 IKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 92 FVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 172 DNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLLSMTEPYML 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 252 GDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPINQIMFWMLLV 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 2458278099 332 LMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFIIN 366
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 605.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 1 MNKPMRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWIL 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 81 RTMHANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKE 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 161 LVQWIWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 241 MLLSMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2458278099 321 INQIMFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFIINIHMANLWNWLI 377
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNIL 377
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 596.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 1 MNKPMRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWIL 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 81 RTMHANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKE 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 161 LVQWIWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 241 MLLSMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2458278099 321 INQIMFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFII 365
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLI 365
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-373 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 594.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 1 MNKPMRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWIL 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 81 RTMHANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKE 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 161 LVQWIWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 241 MLLSMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2458278099 321 INQIMFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFIINIHMANLW 373
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWL 373
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 591.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 5 MRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 85 ANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 165 IWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLLS 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 245 MTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPINQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2458278099 325 MFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFII 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-370 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 586.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 5 MRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 85 ANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 165 IWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLLS 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 245 MTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPINQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2458278099 325 MFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFIINIHMA 370
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLA 369
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 581.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 4 PMRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTM 83
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 84 HANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQ 163
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 164 WIWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLL 243
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 244 SMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPINQ 323
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278099 324 IMFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFIINIHMANLW-NWLIK 378
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIeNNLLK 378
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 572.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 1 MNKPMRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWIL 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 81 RTMHANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKE 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 161 LVQWIWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 241 MLLSMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2458278099 321 INQIMFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFIINIHMANLWNWLIK 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 552.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 4 PMRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTM 83
Cdd:MTH00034 3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 84 HANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQ 163
Cdd:MTH00034 83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 164 WIWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLL 243
Cdd:MTH00034 163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 244 SMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPINQ 323
Cdd:MTH00034 243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2458278099 324 IMFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFII 365
Cdd:MTH00034 323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 519.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 1 MNKPMRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWIL 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 81 RTMHANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKE 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 161 LVQWIWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 241 MLLSMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2458278099 321 INQIMFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFIINIHMANLWNWLIK 378
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-367 |
6.42e-173 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 486.52 E-value: 6.42e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 4 PMRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTM 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 84 HANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQ 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 164 WIWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLL 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 244 SMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPINQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2458278099 324 IMFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFIINI 367
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLI 365
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-365 |
8.05e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 483.82 E-value: 8.05e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 1 MNKPMRSKHPMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWIL 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 81 RTMHANGASLFFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKE 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 161 LVQWIWGGFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 241 MLLSMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2458278099 321 INQIMFWMLLVLMMLLTWIGKRPVEEPYITVGQLLTIMYFSYFII 365
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLI 365
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
17-365 |
6.45e-134 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 387.76 E-value: 6.45e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 17 NSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLFFVCIY 96
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 97 LHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGFAVDNATL 176
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 177 NRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLLSMtEPY---MLGD 253
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGI-EPRietLLQD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 254 PDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPINQIMFWMLLVLM 333
Cdd:MTH00033 252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331
|
330 340 350
....*....|....*....|....*....|...
gi 2458278099 334 MLLTWIGKRPV-EEPYITVGQLLTIMYFSYFII 365
Cdd:MTH00033 332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFLV 364
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-365 |
1.05e-124 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 363.49 E-value: 1.05e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 13 KIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLFF 92
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 93 VCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGFAVD 172
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 173 NATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVnLMLLSMTEPYMLG 252
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLV-FIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 253 DPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNsnfKGIEFYPINQIMFWMLLVL 332
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNN---YTSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|...
gi 2458278099 333 MMLLTWIGKRPVEEPYITVGQLLTIMYFSYFII 365
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
12-365 |
1.49e-119 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 351.79 E-value: 1.49e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 12 IKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLF 91
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 92 FVCIYLHVGRGIYYGSYMY-KE-TWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGF 169
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYKKpRElNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGE 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 170 AVDNATLNRFFTFH-FIMPFIIMMMSMIHLMFLHQNGSNNPMG----LNSNVDKIPFHPYFTFKDTITFLLIIVNLMLLS 244
Cdd:COG1290 180 FPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLA 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 245 MTEPymLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIP--NKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPIN 322
Cdd:COG1290 260 FFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVR 337
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2458278099 323 QIMFWMLLVLMMLLTWIGKRPveEPYITVGQLLTIMYFSYFII 365
Cdd:COG1290 338 TALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
3.65e-86 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 259.61 E-value: 3.65e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 10 PMIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 90 LFFVCIYLHVGRGIYYGSYM--YKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2458278099 168 GFAVDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
11-358 |
3.97e-84 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 259.92 E-value: 3.97e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 11 MIKIMNNSLIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASL 90
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 91 FFVCIYLHVGRGIYYGSYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGFA 170
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 171 VDNATLNRFFTFHFIMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNV-DKIPFHPYFTFKDTITFLLIIVNLMLLSMTEPY 249
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 250 MLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIaLIMSISILMIMPLYNNSNFKGIefypINQIMFWML 329
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVPTFNGSSVYSV----WRQVNFWLI 315
|
330 340
....*....|....*....|....*....
gi 2458278099 330 LVLMMLLTWIGKRPVEEPYITVGQLLTIM 358
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
6.29e-78 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 238.05 E-value: 6.29e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 19 LIDLPAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLFFVCIYLH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 99 VGRGIYYG--SYMYKETWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2458278099 177 NRFFTFHFIMPFIIMMMSMIHLMFLHQNG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
89-254 |
6.36e-46 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 155.09 E-value: 6.36e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 89 SLFFVCIYLHVGRGIYYGSYMYKE--TWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIW 166
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 167 GGFAVDNATLNRFFTFHF-IMPFIIMMMSMIHLMFLHQNGSNNPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLLSM 245
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2458278099 246 TEPYMLGDP 254
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-354 |
8.60e-46 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 153.96 E-value: 8.60e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 208 NPMGLNSNVDKIPFHPYFTFKDTITFLLIIVNLMLLSMTEPYMLGDPDNFMPANPMVTPIHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2458278099 288 KLGGVIALIMSISILMIMPLYNNSNFKGiEFYPINQIMFWMLLVLMMLLTWIGKRPVEEPYITVGQL 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
2.81e-37 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 129.91 E-value: 2.81e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 259 PANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSNFKGIEFYPINQIMFWMLLVLMMLLTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2458278099 339 IGKRPVEEPYITVGQLLTIMY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
23-210 |
4.28e-35 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 128.29 E-value: 4.28e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 23 PAPSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLFFVCIYLHVGRG 102
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 103 IYYGSYMYKE--TWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGFAVDNATLNRFF 180
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|.
gi 2458278099 181 TFH-FIMPFIIMMMSMIHLMFLHQNGSNNPM 210
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
7.77e-26 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 103.26 E-value: 7.77e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 25 PSNISFWWNIGSMLGLCLMIQTITGLFLTMHYTANIDMAFNSVIHICRDVNNGWILRTMHANGASLFFVCIYLHVGRGIY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 105 YGSYMYKE--TWMVGTIILFLMMATAFMGYVLPWGQMSFWGATVITNLLSAVPYLGKELVQWIWGGFAVDNATLNRFFTF 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 2458278099 183 H-FIMPFIIMMMSMIHLMFLHQNGSNNPM 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
243-312 |
1.32e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 62.33 E-value: 1.32e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 243 LSMTEPYMLGDPdnfmpANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSN 312
Cdd:CHL00058 54 LAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVN 118
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
243-312 |
1.25e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 59.42 E-value: 1.25e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 243 LSMTEPYMLGDPdnfmpANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSN 312
Cdd:COG5679 55 LAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVN 119
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
243-312 |
3.20e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 58.27 E-value: 3.20e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278099 243 LSMTEPYMLGDPdnfmpANPMVTPIHIQPEWYFLFAYAILRSIPNKLGGVIALIMSISILMIMPLYNNSN 312
Cdd:TIGR01156 54 LAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVN 118
|
|
|