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Conserved domains on  [gi|2458278128|gb|WEL32821|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Pentaspinula unispinula]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 2.09e-147

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.48  E-value: 2.09e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   5 FVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVIN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  85 LMISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 165 TYNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLI 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278128 245 SLIFLGGDYASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFMLVI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 2.09e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.48  E-value: 2.09e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   5 FVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVIN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  85 LMISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 165 TYNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLI 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278128 245 SLIFLGGDYASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFMLVI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.57e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 287.06  E-value: 1.57e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  13 LMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINLMISLIIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  93 MVFPY--LTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIGTYNISY 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 171 YYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLISLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2458278128 251 GDYASFL------FYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 6.62e-91

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 273.54  E-value: 6.62e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   4 DFVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVI 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  84 NLMISLIIWMVFPY--LTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVL 161
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 162 LIGTYNISYYYYYQFNC-WFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 241 SMLISLIFLGGDYASFL------------FYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLnFFIFFLGFML 308
Cdd:COG1005   247 SALATTLFLGGWLGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 2458278128 309 VIY 311
Cdd:COG1005   326 LLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-310 2.09e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 416.48  E-value: 2.09e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   5 FVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVIN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  85 LMISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 165 TYNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLI 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278128 245 SLIFLGGDYASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFMLVI 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-308 1.11e-127

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 366.28  E-value: 1.11e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   6 VMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  86 MISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIGT 165
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 166 YNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLIS 245
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2458278128 246 LIFLGGDY--ASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFML 308
Cdd:MTH00225  241 ILFFGGFFvtIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-307 6.35e-120

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 346.86  E-value: 6.35e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   6 VMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  86 MISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIGT 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 166 YNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLIS 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2458278128 246 LIFLGGDYASFL-----FYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFM 307
Cdd:MTH00143  241 VLFFGGSSVLFLlggvvFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-310 1.11e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 323.40  E-value: 1.11e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   5 FVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVIN 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  85 LMISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIG 164
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 165 TYNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLI 244
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278128 245 SLIFLGGDYASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFMLVI 310
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-297 9.27e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 308.48  E-value: 9.27e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   7 MFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  87 ISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIGTY 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 167 NISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLISL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2458278128 247 IFLGGDYASFL-------FYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00104  241 LFLGAFHNPYMpelyttnFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 9-297 7.30e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 306.44  E-value: 7.30e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   9 LINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINLMIS 88
Cdd:MTH00111    8 LINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  89 LIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIGTYNI 168
Cdd:MTH00111   88 LTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 169 SYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLISLIF 248
Cdd:MTH00111  168 QTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILF 247

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278128 249 LGGDYASF---LFYFKLIT----VSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00111  248 LNPSTLNLppeLFTINLMTktllLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-304 4.13e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 304.62  E-value: 4.13e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   5 FVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVIN 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  85 LMISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 165 TYNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLI 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2458278128 245 SLIFLGGDY-------ASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFL 304
Cdd:MTH00071  244 TILFLGSTYnhlqpelSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHI 310
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 6-310 4.43e-102

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 301.89  E-value: 4.43e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   6 VMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINL 85
Cdd:MTH00040    4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  86 MISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIGT 165
Cdd:MTH00040   84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 166 YNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLIS 245
Cdd:MTH00040  164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2458278128 246 LIFLGGD-YASFLFYFKLITVSL-------MFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFMLVI 310
Cdd:MTH00040  244 ILFLGGGsPFNEIFPINIIIVGIkttflvfLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 6-310 6.42e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 300.89  E-value: 6.42e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   6 VMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINL 85
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  86 MISLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIGT 165
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 166 YNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLIS 245
Cdd:MTH00195  162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2458278128 246 LIFLGGDyASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFMLVI 310
Cdd:MTH00195  242 ILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-308 1.83e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 295.36  E-value: 1.83e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   1 MKYDFVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  81 PVINLMISLIIW--MVFPYLTYKCSFlySFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00134   81 PMLALTLALTLWapMPMPYPVTDLNL--GILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLS 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 159 TVLLIGTYNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIM 238
Cdd:MTH00134  159 VIIFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANIL 238

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2458278128 239 FMSMLISLIFLGGDY-------ASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFML 308
Cdd:MTH00134  239 LMNTLSAILFLGASHiptlpelTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPI 315
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.57e-96

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 287.06  E-value: 1.57e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  13 LMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINLMISLIIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  93 MVFPY--LTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIGTYNISY 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 171 YYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLISLIFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2458278128 251 GDYASFL------FYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-310 7.02e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 280.51  E-value: 7.02e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   8 FLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINLMI 87
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  88 SLIIWMVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLIGTYN 167
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 168 ISYYYYYQfNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLISLI 247
Cdd:MTH00010  165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2458278128 248 FLGGDYASFL----FYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFMLVI 310
Cdd:MTH00010  244 FTSFIPSIFIsdlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-311 6.62e-91

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 273.54  E-value: 6.62e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   4 DFVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVI 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  84 NLMISLIIWMVFPY--LTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVL 161
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 162 LIGTYNISYYYYYQFNC-WFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 241 SMLISLIFLGGDYASFL------------FYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLnFFIFFLGFML 308
Cdd:COG1005   247 SALATTLFLGGWLGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL-VNLVLTAAVV 325


                  ...
gi 2458278128 309 VIY 311
Cdd:COG1005   326 LLF 328
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 6-308 2.39e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 264.67  E-value: 2.39e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   6 VMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINL 85
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  86 MISLIIWMVFPYLTykcSFLYS-----FLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTV 160
Cdd:MTH00054   82 TLAFIAWGVIPYGE---GVVLSdlgigILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVV 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 161 LLIGTYNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFM 240
Cdd:MTH00054  159 LCVGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILM 238

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2458278128 241 SMLISLIFLGG----------DYASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFML 308
Cdd:MTH00054  239 STFGVILFLGGwlvisgptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-308 7.34e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 263.52  E-value: 7.34e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   1 MKYDFVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  81 PVINLMISLIIWMVFPYL--TYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 159 TVLLIGTYNISYYYYYQFN-CWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2458278128 238 MFMSMLISLIFLGG--------DYASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFLGFML 308
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLF 319
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 1.13e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 262.82  E-value: 1.13e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   5 FVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVIN 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  85 LMISLIIWMVFPYL-TYKCSFL-YSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLL 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGpELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 163 IGTYNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2458278128 243 LISLIFLGGDYASFL----------FYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSL 297
Cdd:PRK06076  249 LITTLFLGGWLPPFPlgggipgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-308 9.87e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 230.29  E-value: 9.87e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   3 YDFVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPV 82
Cdd:MTH00029    4 YSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  83 INLMISLIIWMV--FPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTV 160
Cdd:MTH00029   84 ISFTLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVI 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 161 LLIGTYNISYYYYYQFNCWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFM 240
Cdd:MTH00029  164 LCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILM 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 241 SMLISLIFLGG-----------------------DYASFLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSL 297
Cdd:MTH00029  244 SCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSL 323

                         330
                  ....*....|.
gi 2458278128 298 NFFIFFLGFML 308
Cdd:MTH00029  324 GLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 13-303 3.62e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 206.29  E-value: 3.62e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  13 LMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVINLMISLIIW 92
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  93 MVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLligtYNISYYY 172
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIML----HNNSFSF 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 173 YYQFNCWFMVFMFPLFMccftSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMSMLISLIFLGgd 252
Cdd:MTH00090  159 VSSFSLSLFVIYLPFLI----MIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2458278128 253 yasFLFYFKLITVSLMfIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFF 303
Cdd:MTH00090  233 ---FSFLMLFLIFSLL-IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFF 279
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 5-304 8.52e-53

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 174.73  E-value: 8.52e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   5 FVMFLINYLMLIICVLIsVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEIHNLFISNYFMYYVSPVin 84
Cdd:MTH00058    1 IFGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVF-- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  85 LMISLIIWMVFPYLTYKCSFLYSF--LFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLL 162
Cdd:MTH00058   78 LLVLLVVFYCFIYGSYYSGSYSSLslLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLC 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 163 IGTYNISYYYyyqFNCWFMVFMFPLFMCCFTSC-LAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFMS 241
Cdd:MTH00058  158 YGSYSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFS 234

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2458278128 242 MLISLIFLGGDYASFLFYFKLitvsLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFL 304
Cdd:MTH00058  235 WLGSVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-297 4.58e-34

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 127.37  E-value: 4.58e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   3 YDFVMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPNKVGFLGLPQPFSDAIKLLNKEihNLFIS--NYFMYYVS 80
Cdd:CHL00032   24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKE--DLLPSrgDIRLFSIG 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  81 PVINLMISLIIWMVFPyltykcsFLYSFL---------FFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVS 151
Cdd:CHL00032  102 PSIAVISILLSYLVIP-------FGYHLVladlsigvfLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIP 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 152 LALILLSTVLL---IGTYNI----SYYYYYQFNCW-----FMVFmfplfmccFTSCLAETNRTPFDFAEGESELVSGFNV 219
Cdd:CHL00032  175 LTLCVLSISLLsnsLSTVDIveaqSKYGFWGWNLWrqpigFIVF--------LISSLAECERLPFDLPEAEEELVAGYQT 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 220 EYGSGGFTLIFLSEYTSIMFMSMLISLIFLGG-----DYASFLFYFK--------------LITVSLMF------IWVRG 274
Cdd:CHL00032  247 EYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGwnlsiPYIFIPELFEinktggvfgttigiFITLAKTYlflfisITTRW 326

                         330       340
                  ....*....|....*....|...
gi 2458278128 275 TLPRYRYDKLMYLAWKSFLPLSL 297
Cdd:CHL00032  327 TLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 1.94e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 105.65  E-value: 1.94e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128   6 VMFLINYLMLIICVLISVAFLTLLERKVLGYIQIRKGPnkvgflGLPQPFSDAIKLLNKEiHNLFISNYFMYYVSPVINL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKE-TVVPETASWLFRAAPYVAL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128  86 MISLIIWMVFPYLTYKC--SFLYSFLFFLCCTSLGVYTVMISGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTVLLI 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 164 GTYNISYYYYYQFN---CWFMVFMFPLFMCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLSEYTSIMFM 240
Cdd:COG0650   154 GSTSLSDIVAYQAAhgpLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278128 241 SMLISLIFLGGDYAS------FLFYFKLITVSLMFIWVRGTLPRYRYDKLMYLAWKSFLPLSLNFFIFFL 304
Cdd:COG0650   234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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