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Conserved domains on  [gi|2458278146|gb|WEL32838|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Ptygomastax nihilsulcus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.13e-35

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 116.88  E-value: 3.13e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   1 MILMMMSMFLTMLIPMMVMLITNILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLL 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2458278146  81 FKSSMIMTLSMSTLFFIMILLMGLYHEWNHGALKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.13e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 116.88  E-value: 3.13e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   1 MILMMMSMFLTMLIPMMVMLITNILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLL 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2458278146  81 FKSSMIMTLSMSTLFFIMILLMGLYHEWNHGALKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.05e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 91.33  E-value: 2.05e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  19 MLITNILSKKmINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIMTLsMSTLFFIM 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGF-VEMLIFIA 78

                          90
                  ....*....|....*.
gi 2458278146  99 ILLMGLYHEWNHGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 8.86e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.86  E-value: 8.86e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   8 MFLTMLIPMMVMLITNILSKKMiNDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*...
gi 2458278146  88 TLsMSTLFFIMILLMGLYHEWNHGALKW 115
Cdd:COG0838    91 GL-IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 3.13e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 116.88  E-value: 3.13e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   1 MILMMMSMFLTMLIPMMVMLITNILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLL 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2458278146  81 FKSSMIMTLSMSTLFFIMILLMGLYHEWNHGALKWA 116
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWV 116
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 2.40e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 114.49  E-value: 2.40e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   3 LMMMSMFLTMLIPMMVMLITNILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2458278146  83 SSMIMTLSMSTLFFIMILLMGLYHEWNHGALKW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-116 7.71e-32

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 108.41  E-value: 7.71e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   1 MILMMMSMFLTMLIPMMVMLITNILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLL 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2458278146  81 FKSSMIMTLSMSTLFFIMILLMGLYHEWNHGALKWA 116
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 2.56e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 107.00  E-value: 2.56e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   1 MILMMMSMFLTMLIPMMVMLITNILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLL 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2458278146  81 FKSSMIMTLSMSTLFFIMILLMGLYHEWNHGALKWA 116
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWV 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 2.05e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 91.33  E-value: 2.05e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  19 MLITNILSKKmINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIMTLsMSTLFFIM 98
Cdd:pfam00507   1 LLLSRLLGPK-RPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGF-VEMLIFIA 78

                          90
                  ....*....|....*.
gi 2458278146  99 ILLMGLYHEWNHGALK 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 4-116 1.94e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 89.61  E-value: 1.94e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   4 MMMSMFLTMLIPMMVMLITNILSKKMINdREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKS 83
Cdd:MTH00106    3 LMLTLLTNTLLASLLVLIAFWLPQLNIY-SEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQT 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2458278146  84 SMIMTLSMSTLFFIMILLMGLYHEWNHGALKWA 116
Cdd:MTH00106   82 NNLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 5-117 8.14e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 88.11  E-value: 8.14e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   5 MMSMFLTMLIPMMVMLITNILSKKMIN---DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLF 81
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSrspDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2458278146  82 KSSMIMTLSMSTLFFIMILLMGLYHEWNHGALKWAN 117
Cdd:MTH00042   81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.00e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 87.67  E-value: 1.00e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   1 MILMMMSMFLTMLIPMMVMLITNILSKkMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPI--- 77
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQ-MTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLpwg 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 2458278146  78 -MLlfkSSMIMTLSMSTLfFIMILLMGLYHEWNHGALKWA 116
Cdd:MTH00136   80 dQL---PSPLLTFFWATA-VLILLTLGLIYEWLQGGLEWA 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 4-116 7.13e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 85.70  E-value: 7.13e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   4 MMMSMFLTMLIPMMVMLITNILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKS 83
Cdd:MTH00113    2 NLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2458278146  84 SMIMTLSMSTLFFIMILLMGLYHEWNHGALKWA 116
Cdd:MTH00113   82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 8-115 8.86e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 82.86  E-value: 8.86e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   8 MFLTMLIPMMVMLITNILSKKMiNDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIM 87
Cdd:COG0838    12 LLVALGLALAMLLLSRLLGPKR-PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGWF 90

                          90       100
                  ....*....|....*....|....*...
gi 2458278146  88 TLsMSTLFFIMILLMGLYHEWNHGALKW 115
Cdd:COG0838    91 GL-IEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 7.72e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 80.42  E-value: 7.72e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   3 LMMMSMFLTMLIPMMVMLITNILSKkMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILP----IM 78
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPL-NNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPtpwaSQ 79

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2458278146  79 LLFKSSMIMTLSMstlffIMILL-MGLYHEWNHGALKWA 116
Cdd:MTH00069   80 LNTPTNTLFWSTL-----ILILLtLGLIYEWIQGGLEWA 113
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-115 8.27e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 80.33  E-value: 8.27e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   1 MILMMMSMFLTMLIPMMVMLItNILSKKMINDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLL 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFI-AFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2458278146  81 FKSSMIMTLSMStlFFIMILLMGLYHEWNHGALKW 115
Cdd:MTH00203   80 NQLSSLSLLLAF--LFLILLTLGLIYEWLQGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 13-116 1.19e-19

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 77.60  E-value: 1.19e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  13 LIPMMVMLITNILSKKMiNDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIMTLsMS 92
Cdd:PRK06602   20 GLGILLLVAGKLLGPRA-PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLGF-VE 97

                          90       100
                  ....*....|....*....|....
gi 2458278146  93 TLFFIMILLMGLYHEWNHGALKWA 116
Cdd:PRK06602   98 AMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 32-115 6.87e-16

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 67.78  E-value: 6.87e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  32 DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSsmIMTLSMSTLF-FIMILLMGLYHEWNH 110
Cdd:MTH00018   30 DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQ--IAPFGFWTMVgFLFILTLGLIYEWIK 107


                  ....*
gi 2458278146 111 GALKW 115
Cdd:MTH00018  108 GGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-115 1.74e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 66.66  E-value: 1.74e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  32 DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIMTLSMSTLFFImILLMGLYHEWNHG 111
Cdd:MTH00055   35 DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKG 113


                  ....
gi 2458278146 112 ALKW 115
Cdd:MTH00055  114 GLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-115 5.14e-13

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 60.72  E-value: 5.14e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  32 DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIMTLSMSTLFFImILLMGLYHEWNHG 111
Cdd:MTH00030   40 DSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSFWIVYTFLI-VLAIGLAYEWIKG 118


                  ....
gi 2458278146 112 ALKW 115
Cdd:MTH00030  119 GLEW 122
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
8-115 3.73e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 50.51  E-value: 3.73e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   8 MFLTMLIPMMVMLITNILSKKMINDrEKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIM 87
Cdd:PRK07756   16 LLLGILLPVVALTLGRMLRPNKPSA-AKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLGLF 94

                          90       100
                  ....*....|....*....|....*...
gi 2458278146  88 TLsMSTLFFIMILLMGLYHEWNHGALKW 115
Cdd:PRK07756   95 AL-IEMLIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
10-115 1.04e-08

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 49.67  E-value: 1.04e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  10 LTMLIPMMVMLITNILSKKMIN---DREKSSPFECGFDPKSSARMpFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMI 86
Cdd:PRK08489   19 LTFVAFFLTTRLARFISRKLAQkntEKLKLAIYECGPEPVKQPNR-ISSHFYIMALLFILFDVEIVFMFPWAVDFKLLGL 97

                          90       100
                  ....*....|....*....|....*....
gi 2458278146  87 MTLsMSTLFFIMILLMGLYHEWNHGALKW 115
Cdd:PRK08489   98 FGL-IEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 32-115 1.53e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 48.90  E-value: 1.53e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  32 DREKSSPFECGFDPKSSARMP--FSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIMTLSMSTLFFIMILLMGLYhEWN 109
Cdd:PRK07928   34 NRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFMLTVFVAYAY-VWR 112


                  ....*.
gi 2458278146 110 HGALKW 115
Cdd:PRK07928  113 RGGLEW 118
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 1.56e-05

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 41.34  E-value: 1.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  32 DREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLLFKSSMIMTLsMSTLFFIMILLMGLYHEWNHG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 2458278146 112 ALKW 115
Cdd:PRK06432  139 YMRW 142
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-115 3.08e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 39.88  E-value: 3.08e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146   1 MILMMMSMFLTMLIPMMVMLITNILSKKMiNDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIMLL 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKK-FDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2458278146  81 FKSSMImtlsmSTLFFIMILLMGLYHEWNHGALKW 115
Cdd:MTH00092   80 DFSSLI-----SFFMLMIFIFFGFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 30-117 9.11e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 36.03  E-value: 9.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278146  30 INDREKSSPFECGFDPKSSARMPFSLQFFMIAVIFLIFDVEIVLILPIM---LLFKSsmimtlSMSTLFFIMILLMGLYH 106
Cdd:MTH00060   32 SGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPfqgLLFYN------FWYYYFFLLLLFLGFVV 105

                          90
                  ....*....|.
gi 2458278146 107 EWNHGALKWAN 117
Cdd:MTH00060  106 ELFSGYVRWVY 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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