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Conserved domains on  [gi|2458278154|gb|WEL32845|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Sinomastax longicornea]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
5-310 1.06e-150

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 424.57  E-value: 1.06e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   5 FIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  85 LMISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 165 TYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLI 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278154 245 SLVFLGGDYFSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLGFKLII 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
5-310 1.06e-150

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 424.57  E-value: 1.06e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   5 FIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  85 LMISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 165 TYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLI 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278154 245 SLVFLGGDYFSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLGFKLII 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.78e-100

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 297.08  E-value: 1.78e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  13 LLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNLMISLIIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  93 AVFPY--LTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGTYNISY 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 171 YYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLISLVFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2458278154 251 GDYFSFL------FYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
4-297 6.14e-97

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 288.95  E-value: 6.14e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   4 DFIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIM 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  84 NLMISLIIWAVFPY--LTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIM 161
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 162 LIGTYNISYYYYYQFNC-WFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2458278154 241 SMLISLVFLGGDYFSFL------------FYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSL 297
Cdd:COG1005   247 SALATTLFLGGWLGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
13-297 3.24e-44

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 153.71  E-value: 3.24e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  13 LLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNLMISLIIW 92
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  93 AVFP----------YLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIML 162
Cdd:NF040610   97 VAIPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 163 IGTYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSM 242
Cdd:NF040610  177 AGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSF 256
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 243 LISLVFLGGDYFSFL---------------FYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSL 297
Cdd:NF040610  257 LVVLLFLGGWNLPGFvtdipvlgiilptlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
5-310 1.06e-150

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 424.57  E-value: 1.06e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   5 FIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMN 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  85 LMISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 164
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 165 TYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLI 244
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278154 245 SLVFLGGDYFSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLGFKLII 310
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
6-308 1.51e-129

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 370.90  E-value: 1.51e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   6 IMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  86 MISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 165
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 166 YNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLIS 245
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2458278154 246 LVFLGGDY--FSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLGFKL 308
Cdd:MTH00225  241 ILFFGGFFvtIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
6-306 6.20e-124

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 356.87  E-value: 6.20e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   6 IMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  86 MISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 165
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 166 YNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLIS 245
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278154 246 LVFLGGDYFSFL-----FYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLGF 306
Cdd:MTH00143  241 VLFFGGSSVLFLlggvvFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
5-310 1.16e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 325.71  E-value: 1.16e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   5 FIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMN 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  85 LMISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 164
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 165 TYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLI 244
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278154 245 SLVFLGGDYFSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLGFKLII 310
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
6-297 7.14e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 309.13  E-value: 7.14e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   6 IMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNL 85
Cdd:MTH00111    5 LLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILAL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  86 MISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 165
Cdd:MTH00111   85 LLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGG 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 166 YNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLIS 245
Cdd:MTH00111  165 YTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTT 244
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2458278154 246 LVFLGGDY-------FSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSL 297
Cdd:MTH00111  245 ILFLNPSTlnlppelFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
5-304 1.19e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 308.47  E-value: 1.19e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   5 FIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMN 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  85 LMISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 164
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 165 TYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLI 244
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2458278154 245 SLVFLGGDYFSFLFYL-------KVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFL 304
Cdd:MTH00071  244 TILFLGSTYNHLQPELstmnlmiKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHI 310
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
7-297 2.84e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 307.32  E-value: 2.84e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   7 MFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  87 ISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGTY 166
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 167 NISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLISL 246
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2458278154 247 VFLGGDY-------FSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSL 297
Cdd:MTH00104  241 LFLGAFHnpympelYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTL 298
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
6-310 3.31e-104

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 307.29  E-value: 3.31e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   6 IMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNL 85
Cdd:MTH00040    4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  86 MISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 165
Cdd:MTH00040   84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 166 YNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLIS 245
Cdd:MTH00040  164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2458278154 246 LVFLGGD-YFSFLFYLKVAMVS-------FMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLGFKLII 310
Cdd:MTH00040  244 ILFLGGGsPFNEIFPINIIIVGikttflvFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
1-304 1.10e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 306.15  E-value: 1.10e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   1 MNYDFIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYIS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  81 PIMNLMISLIIWAVFPyLTYKCSFL-YSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLST 159
Cdd:MTH00134   81 PMLALTLALTLWAPMP-MPYPVTDLnLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 160 IMLIGTYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMF 239
Cdd:MTH00134  160 IIFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILL 239
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2458278154 240 MSMLISLVFLGGDYFSFLFYL-------KVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFL 304
Cdd:MTH00134  240 MNTLSAILFLGASHIPTLPELttinlmtKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHL 311
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
6-302 1.19e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 305.51  E-value: 1.19e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   6 IMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNL 85
Cdd:MTH00195    2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  86 MISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 165
Cdd:MTH00195   82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 166 YNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLIS 245
Cdd:MTH00195  162 FDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTT 241
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2458278154 246 LVFLGGDYfSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIF 302
Cdd:MTH00195  242 ILFLGGGG-TIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIP 297
NADHdh pfam00146
NADH dehydrogenase;
13-302 1.78e-100

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 297.08  E-value: 1.78e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  13 LLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNLMISLIIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  93 AVFPY--LTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGTYNISY 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 171 YYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLISLVFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2458278154 251 GDYFSFL------FYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIF 302
Cdd:pfam00146 243 GWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
6-310 6.11e-97

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 288.60  E-value: 6.11e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   6 IMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNL 85
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  86 MISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIGT 165
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQT 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 166 YNISYYYYYQfNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLIS 245
Cdd:MTH00010  163 FSFSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTS 241
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2458278154 246 LVFLGGDYFSFL----FYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLGFKLII 310
Cdd:MTH00010  242 VFFTSFIPSIFIsdlmLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLL 310
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
4-297 6.14e-97

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 288.95  E-value: 6.14e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   4 DFIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIM 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  84 NLMISLIIWAVFPY--LTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIM 161
Cdd:COG1005    87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 162 LIGTYNISYYYYYQFNC-WFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFM 240
Cdd:COG1005   167 LAGSLNLSEIVEAQAGGlWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2458278154 241 SMLISLVFLGGDYFSFL------------FYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSL 297
Cdd:COG1005   247 SALATTLFLGGWLGPFPilplgglpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-297 1.15e-93

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 280.54  E-value: 1.15e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   5 FIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMN 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  85 LMISLIIWAVFPYL-TYKCSFL-YSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIML 162
Cdd:PRK06076   89 FIPAFLAWAVIPFGpELVIADLnVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 163 IGTYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSM 242
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2458278154 243 LISLVFLGGDYFSFL----------FYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSL 297
Cdd:PRK06076  249 LITTLFLGGWLPPFPlgggipgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
6-305 1.40e-89

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 270.06  E-value: 1.40e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   6 IMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNL 85
Cdd:MTH00054    2 GIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  86 MISLIIWAVFPYLTykcSFLYS-----FLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTI 160
Cdd:MTH00054   82 TLAFIAWGVIPYGE---GVVLSdlgigILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 161 MLIGTYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFM 240
Cdd:MTH00054  159 LCVGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILM 238
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2458278154 241 SMLISLVFLGG----------DYFSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLG 305
Cdd:MTH00054  239 STFGVILFLGGwlvisgptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSG 313
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
1-302 2.10e-88

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 267.37  E-value: 2.10e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   1 MNYDFIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYIS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  81 PIMNLMISLIIWAVFPYL--TYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 159 TIMLIGTYNISYYYYYQFN-CWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2458278154 238 MFMSMLISLVFLGG-----DYF---SFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIF 302
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspiKYFkggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
3-305 3.04e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 231.83  E-value: 3.04e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   3 YDFIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPI 82
Cdd:MTH00029    4 YSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPI 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  83 MNLMISLIIWAVFPYL--TYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTI 160
Cdd:MTH00029   84 ISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVI 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 161 MLIGTYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFM 240
Cdd:MTH00029  164 LCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILM 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 241 SMLISLVFLGG-----------------------DYFSFLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSL 297
Cdd:MTH00029  244 SCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSL 323

                  ....*...
gi 2458278154 298 NFFIFFLG 305
Cdd:MTH00029  324 GLVILTAG 331
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
13-308 3.54e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 203.59  E-value: 3.54e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  13 LLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNLMISLIIW 92
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  93 AVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMligtYNISYYY 172
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIML----HNNSFSF 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 173 YYQFNCWFIIIMLPLFLccftSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSMLISLVFLGgd 252
Cdd:MTH00090  159 VSSFSLSLFVIYLPFLI----MIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2458278154 253 yFSFLFYLkvaMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFLGFKL 308
Cdd:MTH00090  233 -FSFLMLF---LIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
5-304 4.79e-53

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 175.50  E-value: 4.79e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   5 FIMFLINYLLLIICVLIsVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMN 84
Cdd:MTH00058    1 IFGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  85 LMISLIIWAVFPYLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLIG 164
Cdd:MTH00058   80 VLLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 165 TYNISYYYyyqFNCWFIIIMLPLFLCCFTSC-LAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSML 243
Cdd:MTH00058  160 SYSLVDFY---YSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWL 236
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2458278154 244 ISLVFLGGDYFSFLFYLKVamvsFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFL 304
Cdd:MTH00058  237 GSVLFFGGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
13-297 3.24e-44

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 153.71  E-value: 3.24e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  13 LLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEMHNLFISNYFIYYISPIMNLMISLIIW 92
Cdd:NF040610   17 LALIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLML 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  93 AVFP----------YLTYKCSFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIML 162
Cdd:NF040610   97 VAIPfgaviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIM 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 163 IGTYNISYYYYYQFNCWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFMSM 242
Cdd:NF040610  177 AGSLNIVEIVEAQSPIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSF 256
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 243 LISLVFLGGDYFSFL---------------FYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSL 297
Cdd:NF040610  257 LVVLLFLGGWNLPGFvtdipvlgiilptlfFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ndhA CHL00032
NADH dehydrogenase subunit 1
3-297 2.00e-33

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 125.83  E-value: 2.00e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   3 YDFIMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPNKVGLLGLPQPFADAIKLLNKEmhNLFIS--NYFIYYIS 80
Cdd:CHL00032   24 YGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKE--DLLPSrgDIRLFSIG 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  81 PIMNLMISLIIWAVFPyltykcsFLYSFL---------FFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVS 151
Cdd:CHL00032  102 PSIAVISILLSYLVIP-------FGYHLVladlsigvfLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIP 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 152 LALILLSTIML---IGTYNI----SYYYYYQFNCWFIIIMlplFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSG 224
Cdd:CHL00032  175 LTLCVLSISLLsnsLSTVDIveaqSKYGFWGWNLWRQPIG---FIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGI 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 225 GFTLIFLAEYASIMFMSMLISLVFLGG-----DYFSFLFYLKVAMVS------------------FMFIWV--RGTLPRY 279
Cdd:CHL00032  252 KFGLFYVASYLNLLVSSLFVTVLYLGGwnlsiPYIFIPELFEINKTGgvfgttigifitlaktylFLFISIttRWTLPRL 331
                         330
                  ....*....|....*...
gi 2458278154 280 RYDKLMMLAWKSFLPLSL 297
Cdd:CHL00032  332 RMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-304 6.58e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 112.20  E-value: 6.58e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154   6 IMFLINYLLLIICVLISVAFLTLFERKVLGYIQIRKGPnkvgllGLPQPFADAIKLLNKEmHNLFISNYFIYYISPIMNL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKE-TVVPETASWLFRAAPYVAL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154  86 MISLIIWAVFPYLTYKC--SFLYSFLFFLCCTSLGVYTVMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSTIMLI 163
Cdd:COG0650    74 AAMLLAALLVPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 164 GTYNISYYYYYQFN---CWFIIIMLPLFLCCFTSCLAETNRTPFDFAEGESELVSGFNVEYGSGGFTLIFLAEYASIMFM 240
Cdd:COG0650   154 GSTSLSDIVAYQAAhgpLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2458278154 241 SMLISLVFLGGDYFS------FLFYLKVAMVSFMFIWVRGTLPRYRYDKLMMLAWKSFLPLSLNFFIFFL 304
Cdd:COG0650   234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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