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Conserved domains on  [gi|2482671420|gb|WFP44752|]
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ATP synthase F0 subunit 6 [Typhoptera quadrituberculata]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 4.39e-90

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 264.34  E-value: 4.39e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   1 MMNaSLFTVFDPASSLpyHFPLNWLSTFMALMFIPLLYWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPLFL 80
Cdd:MTH00157    1 MMT-NLFSIFDPSTSF--NLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFS 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  81 FILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLA 160
Cdd:MTH00157   78 FILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLA 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2482671420 161 IRLAANMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00157  158 VRLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 4.39e-90

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 264.34  E-value: 4.39e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   1 MMNaSLFTVFDPASSLpyHFPLNWLSTFMALMFIPLLYWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPLFL 80
Cdd:MTH00157    1 MMT-NLFSIFDPSTSF--NLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFS 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  81 FILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLA 160
Cdd:MTH00157   78 FILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLA 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2482671420 161 IRLAANMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00157  158 VRLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 6-225 9.41e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 154.29  E-value: 9.41e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   6 LFTVFDPASSLPYHFPLNWLSTFMA----LMFIPLLYWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPLFLF 81
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  82 ILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAI 161
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2482671420 162 RLAANMIAGHLLLTLLGSMGPILSLLPSSLLILT-QIALLLLECAVAIIQAYVFTLLCTLYANEA 225
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLiLVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 85-221 1.80e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 138.30  E-value: 1.80e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  85 NNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAIRLA 164
Cdd:cd00310    18 SNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLF 97

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2482671420 165 ANMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLY 221
Cdd:cd00310    98 ANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP-synt_A pfam00119
ATP synthase A chain;
85-221 3.90e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 100.64  E-value: 3.90e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  85 NNFLGLF---PYIFTSSSHLAMTLSLALPLWLSFMFFGWFKN-TKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLA 160
Cdd:pfam00119  71 SNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLS 150

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2482671420 161 IRLAANMIAGHLLLTLLGSMGPILSLLPSSLLILT---QIALLLLECAVAIIQAYVFTLLCTLY 221
Cdd:pfam00119 151 LRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVY 214
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 85-225 2.15e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 90.52  E-value: 2.15e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  85 NNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKN-TKHMFAHLVPQGTPvALMVFMVCIETVSLLIRPATLAIRL 163
Cdd:COG0356    71 SNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRL 149

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2482671420 164 AANMIAGHLLLTLLGSMGPILSLLPSSLLIltQIALLLLECAVAIIQAYVFTLLCTLYANEA 225
Cdd:COG0356   150 FGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVYISLA 209
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-224 4.39e-90

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 264.34  E-value: 4.39e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   1 MMNaSLFTVFDPASSLpyHFPLNWLSTFMALMFIPLLYWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPLFL 80
Cdd:MTH00157    1 MMT-NLFSIFDPSTSF--NLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFS 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  81 FILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLA 160
Cdd:MTH00157   78 FILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLA 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2482671420 161 IRLAANMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00157  158 VRLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 2-224 1.12e-47

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 156.73  E-value: 1.12e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   2 MNASLFTVFDPASSLPYHF-PLNWLSTFMALMFIPLLYWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPLFL 80
Cdd:MTH00176    1 MLVDLFSSFDPPNKNIFSMiSLSWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  81 FILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLA 160
Cdd:MTH00176   81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2482671420 161 IRLAANMIAGHLLLTLLGSMGPILS---LLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00176  161 VRLAANLSAGHLLLGLLGAAMWGLLpvsPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 6-225 9.41e-47

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 154.29  E-value: 9.41e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   6 LFTVFDPASSLPYHFPLNWLSTFMA----LMFIPLLYWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPLFLF 81
Cdd:TIGR01131   1 LFSQFDISPITLFSLTLLSLILLLSllifLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  82 ILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAI 161
Cdd:TIGR01131  81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2482671420 162 RLAANMIAGHLLLTLLGSMGPILSLLPSSLLILT-QIALLLLECAVAIIQAYVFTLLCTLYANEA 225
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLiLVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 85-221 1.80e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 138.30  E-value: 1.80e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  85 NNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAIRLA 164
Cdd:cd00310    18 SNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLF 97

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2482671420 165 ANMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLY 221
Cdd:cd00310    98 ANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 2-224 2.22e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 138.07  E-value: 2.22e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   2 MNASLFTVFDPA-SSLPYHFPLNWLSTFMALMFIPLLYWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPLFL 80
Cdd:MTH00173    1 MMVDLFSSFDDHnSSFSSLSFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  81 FILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLA 160
Cdd:MTH00173   81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2482671420 161 IRLAANMIAGHLLLTLLGSMGPILS----LLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00173  161 VRLLANISAGHIVLTLIGNYLSSSLfsssVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 2-224 1.42e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 133.32  E-value: 1.42e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   2 MNASLFTVFDPASSLPYHFPLN---WLSTFMALMFIPLLYWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPL 78
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSStafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISAL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  79 FLFILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPAT 158
Cdd:MTH00005   81 FTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPIT 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2482671420 159 LAIRLAANMIAGHLLLTLLG---SMGPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00005  161 LSFRLAANMSAGHIVLSLIGiyaASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 2-224 4.66e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 129.17  E-value: 4.66e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   2 MNASLFTVFDPASSLpyHFPLNWLSTFMALMFIPLL-YWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPLFL 80
Cdd:MTH00120    1 MNLNFFDQFSSPELL--GIPLILLAMLIPALLIPSPkNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLML 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  81 FILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLA 160
Cdd:MTH00120   79 LLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2482671420 161 IRLAANMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALLL---LECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00120  159 VRLTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLltiLELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 1-224 7.68e-36

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 126.24  E-value: 7.68e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   1 MMNASLFTVFDPASSLPyhFPLNWLSTFMALMFIPLLY--WFIPSRPNMIML-FITKLLDLEFFALLGKPNQGTTSILLP 77
Cdd:MTH00035    2 IINNSIFGQFSPDTILF--IPLTLLSSVIALSWLFFINptNWLPSRSQSIWLtFRQEILKLIFQNTNPNTAPWAGLLTTV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  78 LFLFILYNnFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPA 157
Cdd:MTH00035   80 FILILSIN-VLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPI 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2482671420 158 TLAIRLAANMIAGHLLLTLLGSM--GPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00035  159 ALGLRLAANLTAGHLLIFLLSTAiwELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 85-221 7.69e-34

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 120.83  E-value: 7.69e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  85 NNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAIRLA 164
Cdd:MTH00101   82 TNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLT 161

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420 165 ANMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALLL---LECAVAIIQAYVFTLLCTLY 221
Cdd:MTH00101  162 ANITAGHLLIHLIGGATLALMSISTTTALITFIILILltiLEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 2-224 1.47e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 120.05  E-value: 1.47e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   2 MNASLFTVFDPASSLpyHFPLNWLSTFM-ALMFIPLLYWFIPSRPNMIMLFITKLLDLEFFALLGKPNQGTTSILLPLFL 80
Cdd:MTH00179    1 MMLSMFDQFESPSLL--GIPLLALALLLpWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLML 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  81 FILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLA 160
Cdd:MTH00179   79 FLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2482671420 161 IRLAANMIAGHLLLTLLGSMGPILSLLPSSLLILTQ---IALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00179  159 VRLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 86-224 7.25e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 115.74  E-value: 7.25e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  86 NFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAIRLAA 165
Cdd:MTH00132   84 NMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTA 163

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2482671420 166 NMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALLL---LECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00132  164 NLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLltlLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 86-224 8.59e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 107.75  E-value: 8.59e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  86 NFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAIRLAA 165
Cdd:MTH00073   84 NLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVRLTA 163

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2482671420 166 NMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALLLL---ECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00073  164 NLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLtllEIAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
85-221 3.90e-26

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 100.64  E-value: 3.90e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  85 NNFLGLF---PYIFTSSSHLAMTLSLALPLWLSFMFFGWFKN-TKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLA 160
Cdd:pfam00119  71 SNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLS 150

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2482671420 161 IRLAANMIAGHLLLTLLGSMGPILSLLPSSLLILT---QIALLLLECAVAIIQAYVFTLLCTLY 221
Cdd:pfam00119 151 LRLFGNMLAGHLLLLLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVY 214
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 86-224 8.08e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 100.12  E-value: 8.08e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  86 NFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAIRLAA 165
Cdd:MTH00172   86 NLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAA 165

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2482671420 166 NMIAGHLLLTLLGSMGPILSLLPSSLLI---LTQIALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00172  166 NLSAGHLLFAILAGFGFNMLCASGFLSLfplLIMVFITLLEIAVAVIQAYVFCLLTTIYLAD 227
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 2-221 7.88e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 97.77  E-value: 7.88e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420   2 MNASLFTVFDPASSLPYH-FPLNWLSTF----MALMFIPLLYWF-------IPSRPNMIMLFITKLLDLEFFALLGKPNQ 69
Cdd:MTH00175    1 MLAAYFDQFNIIRLITIQaFLGDWLVTFtnssMMMVLAVIIFWLllkgdklIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  70 GTTSILLPLFLFILYNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIET 149
Cdd:MTH00175   81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2482671420 150 VSLLIRPATLAIRLAANMIAGHLLLTLLG----SMGPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLY 221
Cdd:MTH00175  161 LSYLIRAISLGVRLAANISAGHLLFAILSgfafNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 85-225 2.15e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 90.52  E-value: 2.15e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  85 NNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKN-TKHMFAHLVPQGTPvALMVFMVCIETVSLLIRPATLAIRL 163
Cdd:COG0356    71 SNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRL 149

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2482671420 164 AANMIAGHLLLTLLGSMGPILSLLPSSLLIltQIALLLLECAVAIIQAYVFTLLCTLYANEA 225
Cdd:COG0356   150 FGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVYISLA 209
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 86-225 7.95e-20

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 84.08  E-value: 7.95e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  86 NFLGLFP-YIFTSSSHLAMTLSLALPLWLSFMFFG-WFKNTKHMFAHLVPQGTPvalmvFMVCIETVSLLIRPATLAIRL 163
Cdd:PRK05815   87 NLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIISEFSRPISLSLRL 161

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2482671420 164 AANMIAGHLLLTLLGSMGPILSLLPSSLLILTqIALLLLECAVAIIQAYVFTLLCTLYANEA 225
Cdd:PRK05815  162 FGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVYISMA 222
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 84-221 3.36e-16

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 74.98  E-value: 3.36e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  84 YNNFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAIRL 163
Cdd:MTH00174  103 FGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRL 182

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2482671420 164 AANMIAGHLLLTLLGSMGPILSLLPSSLLILTQIALL----LLECAVAIIQAYVFTLLCTLY 221
Cdd:MTH00174  183 AANISSGHLLFSIIASFAWKMINTGILIGSFVPFAILifvtILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 86-221 3.59e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 67.46  E-value: 3.59e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  86 NFLGLFPYIFTSSSHLAMTLSLALplwlsFMFF----GWFK--NTKHMFAHLVpQGTPVALMVFMVCIETVSLLIRPATL 159
Cdd:PRK13419  185 NLLGLVPYGATATGNINVTLTLAV-----FTFFitqyAAIKahGIKGYLAHLT-GGTHWSLWIIMIPIEFIGLFTKPFAL 258

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2482671420 160 AIRLAANMIAGHL-LLTLLG-SMGPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLY 221
Cdd:PRK13419  259 TVRLFANMTAGHIvILSLIFiSFILKSYIVAVAVSVPFAIFIYLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 86-224 9.83e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 58.84  E-value: 9.83e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  86 NFLGLFPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKhmFAHLVPQGTPVALMVF-MVCIETVSLLIRPATLAIRLA 164
Cdd:MTH00087   66 CFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEK--FSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLT 143

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420 165 ANMIAGHLLLTLLGSMGPILSLLPsslliltqIALLLLECAVAIIQAYVFTLLCTLYANE 224
Cdd:MTH00087  144 VNLMVGHLISSLLNFLGEKYVWLS--------ILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 96-221 7.51e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 51.81  E-value: 7.51e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  96 TSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIE-TVSLLIRPATLAIRLAANMIAGH-LL 173
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHvII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2482671420 174 LTLLGSMGPILSLLPSSLLILTQIALLLLECAVAIIQAYVFTLLCTLY 221
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 91-180 8.94e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 41.79  E-value: 8.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671420  91 FPYIFTSSSHLAMTLSLALPLWLSFMFFGWFKNTKHMFAHLVPQGTPVALMVFMVCIETVSLLIRPATLAIRLAANMIAG 170
Cdd:MTH00050   42 LPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121

                          90
                  ....*....|
gi 2482671420 171 HLLLTLLGSM 180
Cdd:MTH00050  122 CFGGVALGNL 131
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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