|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
9-575 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 650.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 9 KISSMMLFVLSVMSSVSGFYMISCDYVIFIEWEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYI 88
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 89 NRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLNLGSW 168
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNFGSW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 169 NFIYYIDILHFEVWGFMIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMv 248
Cdd:MTH00165 165 NFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFFS- 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 249 SGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQ 328
Cdd:MTH00165 244 KFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQ 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 329 DIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGE 408
Cdd:MTH00165 324 DIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGD 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 409 FNFISGYSVRDHSGPMLSMMVILMIMAITGGSLLSWSFFISPTMICLPWFLKMLITVVILVGGVGGYFLSKM-LSFVVNL 487
Cdd:MTH00165 404 FNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLGYELSLMsLSYNLKS 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 488 LRYYWGMVFLGSMWFMPGLSTQGVSMLPLILGAQLPSVVDQGWSEEWGGQKLYKWFLDLSQLVQWLQDNSLKIYLLSFVF 567
Cdd:MTH00165 484 LKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLL 563
|
....*...
gi 2482671423 568 WVMIMLFM 575
Cdd:MTH00165 564 WMIILLLL 571
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
10-575 |
1.11e-174 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 506.30 E-value: 1.11e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 10 ISSMMLFVLSVMSSVSGFYMISCDYVIFIEWEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYIN 89
Cdd:MTH00151 6 LSSFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 90 RFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLNLGSWN 169
Cdd:MTH00151 86 RFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 170 FIYYIDilhFEVWGFMiVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVS 249
Cdd:MTH00151 166 ILSMWD---FKLSGWL-GLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 250 GLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQD 329
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQD 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 330 IRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEF 409
Cdd:MTH00151 322 IRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSM 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 410 NFISGYSVRDHSGPMLSMMVILMIMAITGGSLLSWSFFISPTMICLPWFLKMLITVVILVGGVGGYFLSKMLSFVVNLLR 489
Cdd:MTH00151 402 KSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVK 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 490 YYWgmvFLGSMWFMPGLSTQGVSMLPLILGAQLPSVVDQGWSEEWGGQKLYKWFLDLSQLVQWLQDNSLKIYLLSFVFWV 569
Cdd:MTH00151 482 LSF---FFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLV 558
|
....*.
gi 2482671423 570 MIMLFM 575
Cdd:MTH00151 559 LFLVVI 564
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
9-576 |
4.62e-167 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 486.85 E-value: 4.62e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 9 KISSMMLFVLSVMSSVSGFYMISCDYVIFIEWEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYI 88
Cdd:MTH00209 3 KMQMFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 89 NRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLNLGSW 168
Cdd:MTH00209 83 KRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGNW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 169 NFIYYIDILHFEVWgfmIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMV 248
Cdd:MTH00209 163 NIFYLNFNSNLGSV---ISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 249 SGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQ 328
Cdd:MTH00209 240 MSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 329 DIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGE 408
Cdd:MTH00209 320 DIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGP 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 409 FNFISGYSVRDHSGPMLSMMVILMIMAITGGSLLSWSFFISPTMICLPWFLKMLITVVILVGGVGGYFLSKMLSFvvnLL 488
Cdd:MTH00209 400 NSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFF---LI 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 489 RYYWGMVFLGSMWFMPGLSTQGVSMLPLILGAQLPSVVDQGWSEEWGGQKLYKWFLDLSQLVQWLQDNSLKIYLLSFVFW 568
Cdd:MTH00209 477 KGYKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLI 556
|
....*...
gi 2482671423 569 VMIMLFMG 576
Cdd:MTH00209 557 LLGVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
9-575 |
1.73e-161 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 473.10 E-value: 1.73e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 9 KISSMMLFVLSVMSSVSGFYMISCDYVIFIEWEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYI 88
Cdd:MTH00207 8 SIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 89 NRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLNLGSW 168
Cdd:MTH00207 88 SRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLNQGHW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 169 NFIYYIDIlHFEVWgfmIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMV 248
Cdd:MTH00207 168 SITNMWQT-DMNNY---IALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFN 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 249 SGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQ 328
Cdd:MTH00207 244 PALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQ 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 329 DIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGE 408
Cdd:MTH00207 324 DLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSP 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 409 FNFISGYSVRDHSGPMLSMMVILMIMAITGGSLLSWSFFISPTMICLPWFLKMLITVVILVGGVGGY-FLSKMLSFVVNL 487
Cdd:MTH00207 404 NSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWlFTTPNITKTPLL 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 488 LRYYWGMVFLGSMWFMPGLSTQGVSMLPLILGAQLPSVVDQGWSEEWGGQKLYKWFLDLSQLVQWLQDNSLKIYL-LSFV 566
Cdd:MTH00207 484 INNPLSHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLmMSFV 563
|
....*....
gi 2482671423 567 FWVMIMLFM 575
Cdd:MTH00207 564 LLTIIIIMT 572
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-575 |
3.67e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 349.64 E-value: 3.67e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 1 MFLLLTVDKISSMMLFVLSVMSSVSGFYMISCDYV--IFIEWEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYS 78
Cdd:MTH00211 20 LLLPLNNSKLHIKKAVKLSFFISLIPLLIFLDQGLetILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 79 GEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTAL-SNRIGDVALLM 157
Cdd:MTH00211 100 LWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAViYNRIGDIGLLL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 158 TIAWML-NLGSWNFIYYIDILHFEVWGFMiviLVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR 236
Cdd:MTH00211 180 SMVWLLlNLNSWEISQLFILNLDLTLFLL---GLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIR 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 237 FSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMC 316
Cdd:MTH00211 257 LSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMC 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 317 AGAIIHNMKNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCY 396
Cdd:MTH00211 337 SGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAY 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 397 SLRLSYYSMVGEFNFISGYSVRDHSGPMLSMMVILMIMAITGGSLLSWSFFISPTMI-CLPWFLKMLITVVILVGGVGGY 475
Cdd:MTH00211 417 SFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEIlSLPFLLKLMPLLVTIVGLLLGL 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 476 FLSKMLSFVVNLLryywGMVFLGSMWFMPGLSTQGVSMLPLILGAQL-PSVVDQGWSEEWGGQKLYKWFLDLSQLVQWLQ 554
Cdd:MTH00211 497 ELVNLTHKQLKTS----TLSFSNMLGYYPPIIHRLLPKLSLKWGQTLsTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQ 572
|
570 580
....*....|....*....|.
gi 2482671423 555 DNSLKIYLLSFVFWVMIMLFM 575
Cdd:MTH00211 573 QGLIKSYLALLLLSLLLILLL 593
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
36-575 |
8.29e-97 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 307.48 E-value: 8.29e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 36 IFIEWEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISIL 115
Cdd:MTH00004 62 ITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 116 LGWDGLGLVSYCLViyyqNWKSYGAGMLTA-----LSNRIGDVALLMTIAWM-LNLGSWNFIyyiDILHFEVWGFMIVIL 189
Cdd:MTH00004 142 IGWEGVGIMSFLLI----GWWSGRAEANTAalqaiIYNRIGDIGLILSMAWLaMTLNTWEIQ---QLFSPTQTPTLPLLG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 190 VVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSG-LIMISMITMFMSgIGANL 268
Cdd:MTH00004 215 LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTIcLCLGALTTLFAA-TCALT 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 269 EYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRYMGSLSWQLPITTGCFN 348
Cdd:MTH00004 294 QNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLT 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 349 VANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNFISGYSVRDHSGPMLSMM 428
Cdd:MTH00004 374 IGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPI 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 429 VILMIMAITGGSLLSWSFF-ISPTMICLPWFLK---MLITVVILVggvggyfLSKMLSFVVNLLRY---YWGMVFLGSMW 501
Cdd:MTH00004 454 TRLALGSILAGLLISSTILpTKTPPMTMPTTTKlaaLIVTILGIL-------LALELSNMTTTLTPpkqNTLHNFSNQLA 526
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2482671423 502 FMPGLSTQGVSMLPLILGAQLPS-VVDQGWSEEWGGQKLYKWFLDLSQLVQWLQDNSLKIYLLSFVFWVMIMLFM 575
Cdd:MTH00004 527 FFNPLTHRLLPMTLLKSSQKIAThLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLLLLL 601
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
10-574 |
7.51e-94 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 300.35 E-value: 7.51e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 10 ISSMMLFVLSVMSSVSGFYMISCD----YVIFIEWevFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGD 85
Cdd:MTH00208 57 FSISLLKTLAFLSLINLLIWILLGcpniNISLSNW--LSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSND 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 86 VYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTA-LSNRIGDVALLMTIAW-ML 163
Cdd:MTH00208 135 PNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAvIYNRIGDIGIILFLSLsLI 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 164 NLGSWNF--IYYIDILHFEvWGFMIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLI 241
Cdd:MTH00208 215 NFNSWNLneILSLNNSNSF-LINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLI 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 242 SMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAII 321
Cdd:MTH00208 294 SNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSII 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 322 HNMKNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLS 401
Cdd:MTH00208 374 HSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRII 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 402 YYSMVGEFNFISGYSVRDHSGPMLSMMVILMIMAITGGSLLSWSFFISPTMIcLPWFLKMLITVVILVGGVGGYFLSKML 481
Cdd:MTH00208 454 FFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLT-LPLILKSLPLIVTIIGAAFSFSFLLSL 532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 482 SFVVNLLRYYWgmvFLGSMWFMPGLSTQGVSMLPLILGAQLPS-VVDQGWSEEWGGQKLYKWFLDLSQLVQWLQDNSLKI 560
Cdd:MTH00208 533 SSNPINSNFFS---FLSNQWFFVNISHSIIISFSFFTSLFGSTrTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQ 609
|
570
....*....|....
gi 2482671423 561 YLLSFVFWVMIMLF 574
Cdd:MTH00208 610 YLLSSTLLFLLILT 623
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
35-446 |
5.30e-92 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 294.75 E-value: 5.30e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 35 VIFIEWEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISI 114
Cdd:COG1009 57 VVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 115 LLGWDGLGLVSYCLVIYYQNWKSYGAGMLTA-LSNRIGDVALLMTIAWMLNL-GSWNF---IYYIDILHFEVWGFMIVIL 189
Cdd:COG1009 137 FVFWELVGLCSYLLIGFWYEKPSARRAARKAfLVTRVGDLGLLLGILLLGAIaGTLNFselLAAAPTILSSPLLTLILLL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 190 VVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLE 269
Cdd:COG1009 217 LLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQ 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 270 YDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNV 349
Cdd:COG1009 297 TDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT-RDIRKMGGLRKKMPITAITFLI 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 350 ANLALCGMPFLAGYYSKDLILEVVMLS-NMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNFISGYSVRDHSGPMLSMM 428
Cdd:COG1009 376 GALSLAGIPPFAGFFSKEAILEAALEAgGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPL 455
|
410
....*....|....*...
gi 2482671423 429 VILMIMAITGGSLLSWSF 446
Cdd:COG1009 456 VVLAVLSLVLGLLLPGLL 473
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-575 |
5.45e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 292.20 E-value: 5.45e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 1 MFLLLTVDKISSMMLFVLSVMSSVSGFYMISC-DYVIFIE---------WEVFTLNSTSVVMTLLFDWMSLIFMGFVMFI 70
Cdd:MTH00066 15 LLLLILPLLLPKSNNFHTNVKTSVKTAFFISLiPLMIFINqglesittsFHWMNIFNFNINSSFKFDQYSIIFLPIALFV 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 71 SSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLV-IYYQNWKSYGAGMLTALSNR 149
Cdd:MTH00066 95 TWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIgWWHARADANTAALQAVLYNR 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 150 IGDVALLMTIAW-MLNLGSWNFIYyidILHFEVWGFMIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVT 228
Cdd:MTH00066 175 VGDIGLILSMAWlAMNTNSWELQQ---IFLLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVV 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 229 AGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHAL 308
Cdd:MTH00066 252 AGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAF 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 309 FKALLFMCAGAIIHNMKNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIF 388
Cdd:MTH00066 332 FKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLI 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 389 STGLTVCYSLRLSYYSMVGEFNFISGYSVRDHSGPMLSMMVILMIMAITGGSLLSWSFFISPTMI-CLPWFLKMLITVVI 467
Cdd:MTH00066 412 ATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQIlTMPTFMKLAALLVT 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 468 LVGGVGGYFLSKMLSFVVNLLRYYwgmVFLGSMWFMPGLSTQGVSMLPLILGAQLPS-VVDQGWSEEWGGQKLYKWFLDL 546
Cdd:MTH00066 492 LLGLLIALDLAKITSKTTPKTKMH---SFSNLLAFFPTIIHRLSPKTNLNSGQNIAThLTDMTWYEKSGPKGLTNQQLPP 568
|
570 580
....*....|....*....|....*....
gi 2482671423 547 SQLVQWLQDNSLKIYLLSFVFWVMIMLFM 575
Cdd:MTH00066 569 IKTITNIQTGLIKTYLTLFLITLLLMLIL 597
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
40-462 |
3.10e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 287.52 E-value: 3.10e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 40 WEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWD 119
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 120 GLGLVSYCLVIYYqnwksYG------AGMLTALSNRIGDVALLMTIAW-MLNLGSWNFiYYIDILHFEVWGFMIVILVvL 192
Cdd:MTH00108 146 GVGIMSFLLIGWW-----YGrtdantAALQAILYNRIGDIGFILAMAWfLLNLNSWDL-QQIFMLNPNNSNLPLMGLL-L 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 193 AALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDL 272
Cdd:MTH00108 219 AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDI 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 273 KKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRYMGSLSWQLPITTGCFNVANL 352
Cdd:MTH00108 299 KKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSL 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 353 ALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNFISGYSVRDHSGPMLSMMVILM 432
Cdd:MTH00108 379 ALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLL 458
|
410 420 430
....*....|....*....|....*....|...
gi 2482671423 433 IMAITGGSLLSWSffISPTMI---CLPWFLKML 462
Cdd:MTH00108 459 LGSIFAGFLISNN--IPPTTIpqmTMPLYLKLT 489
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
40-443 |
3.82e-81 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 266.46 E-value: 3.82e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 40 WEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWD 119
Cdd:TIGR01974 65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 120 GLGLVSYCLV-IYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLN-LGSWNF--IYYIDILHFEVWGFMIVILVVLAAL 195
Cdd:TIGR01974 145 GVGLCSYLLIgFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWyFGTLNFqeVFALAPGAFFSALTLICLLLFIGAM 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 196 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKI 275
Cdd:TIGR01974 225 GKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 276 IALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRYMGSLSWQLPITTGCFNVANLALC 355
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 356 GMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNFISGYSVRDHSGPMLSMMVILMIMA 435
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
|
....*...
gi 2482671423 436 ITGGSLLS 443
Cdd:TIGR01974 465 VFAGFFIV 472
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
40-400 |
1.48e-76 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 254.70 E-value: 1.48e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 40 WEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWD 119
Cdd:PRK06590 66 WTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 120 GLGLVSYCLVIYYQNWKSYGAGMLTA-LSNRIGDVALLMTIAWML-NLGSWNFIY-YIDILHFEVWGFMIV----ILVVL 192
Cdd:PRK06590 146 GVGLCSYLLIGFWYKKPSAGAAAMKAfIVNRVGDVGLALGIFLLFaEFGSLNYDEvFAAAPQFFGLGWSALtlicLLLFI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 193 AALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMySYMVSGLIMI-SMITMFMSGIGANLEYD 271
Cdd:PRK06590 226 GAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFEL-SPEALLFVAIvGAVTALFAAFIGLVQTD 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 272 LKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRYMGSLSWQLPITTGCFNVAN 351
Cdd:PRK06590 305 IKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGT 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2482671423 352 LALCGMPFLAGYYSKDLILEVVmLSNMNIFIFFLFIFSTGLTVCYSLRL 400
Cdd:PRK06590 385 LALIGIPPFAGFFSKDEILEAA-FANGHINLFVAGLVGAFLTAFYSFRL 432
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
56-405 |
1.53e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 254.37 E-value: 1.53e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 56 FDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYqnw 135
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWW--- 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 136 ksYG------AGMLTALSNRIGDVALLMTIAWML-NLGSWNfIYYIDILHFEVWGFMIVILVVLAALTKSAQIPFSSWLP 208
Cdd:MTH00137 163 --YGradantAALQAVIYNRVGDIGLILAMAWMAtNLNSWE-IQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLP 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 209 AAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMM 288
Cdd:MTH00137 240 SAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMM 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 289 GSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDL 368
Cdd:MTH00137 320 VTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDA 399
|
330 340 350
....*....|....*....|....*....|....*...
gi 2482671423 369 ILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYY-SM 405
Cdd:MTH00137 400 IIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFvSM 437
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
40-574 |
2.88e-67 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 229.58 E-value: 2.88e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 40 WEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWD 119
Cdd:MTH00020 62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 120 GLGLVSYCLV-IYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLNL-GSWNF--IYYIDILHFEVWGFMIVILVVLAAL 195
Cdd:MTH00020 142 GVGLCSYLLInFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRfGSLDFssVFNMVVSAPSSDITLICLFLFIGAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 196 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKI 275
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 276 IALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRYMGSLSWQLPITTGCFNVANLALC 355
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 356 GMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNFISGYSVRDHSGP--MLSMMVILMI 433
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDwnLLLPLGILAL 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 434 MAITGGSLLS---WSFFISPTMIcLPWFLKML---ITVVILVGGVGGYFLSKMLSFVVNLLRYYWGMVFLGSMWFMPGLS 507
Cdd:MTH00020 462 GSIFVGYLAKemiWSFQITLPPI-VPLSIKLLpvfLSLGGIGLVIILYFYSSKTFRVPFSFIGRNSYTFLGSAWQFNYIL 540
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2482671423 508 TQGVSMLPLILGAQLP-SVVDQGWSEEWGGQKLYKWFLDLSQLVQWLQDNSLKIYLLSFVFWVMIMLF 574
Cdd:MTH00020 541 NYFLIKKIWKGGHLISyRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFIW 608
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
14-416 |
1.21e-62 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 215.17 E-value: 1.21e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 14 MLFVLSVMSSVSGFYMISCDYVIFIEWEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFII 93
Cdd:MTH00095 1 MNILIFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 94 LVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLNLGSWnfiyy 173
Cdd:MTH00095 81 VLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYY----- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 174 idILHFEVWGFMIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIm 253
Cdd:MTH00095 156 --FFSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVMKIMLL- 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 254 ISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRYM 333
Cdd:MTH00095 233 IGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNY 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 334 GSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNFIS 413
Cdd:MTH00095 313 SNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLSFSKVVN 392
|
...
gi 2482671423 414 GYS 416
Cdd:MTH00095 393 VYS 395
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
17-410 |
2.55e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 205.63 E-value: 2.55e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 17 VLSVMSSVSGFYMI----SCDYVIFIEWEVFTLNSTSvvMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFI 92
Cdd:MTH00210 37 VISAIVSCCIFYETtlngSATYIKLWRWFDSELLTTY--FGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 93 ILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLV-IYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLN-LGSWNF 170
Cdd:MTH00210 115 SYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLInFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKeFGTLEF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 171 IYYIDILHFEVWG---FMIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYM 247
Cdd:MTH00210 195 STISSLLVTNINKeslTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLA 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 248 VSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNY 327
Cdd:MTH00210 275 LTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDE 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 328 QDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVG 407
Cdd:MTH00210 355 QDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFIT 434
|
...
gi 2482671423 408 EFN 410
Cdd:MTH00210 435 NTN 437
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
49-409 |
1.56e-54 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 196.01 E-value: 1.56e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 49 SVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCL 128
Cdd:PRK07376 82 HLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 129 VIYYQNWKSYGAGMLTA-LSNRIGDVALLMTIawmLNL----GSWNFIYYIDILHFEVWGFMI--------VILVVLAAL 195
Cdd:PRK07376 162 VGFWYDRKGAADAAQKAfVVNRVGDFGLLLGI---LGLfwatGSFDFDGIADRLSELVSSGAVsgwlalllCILVFLGPM 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 196 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKI 275
Cdd:PRK07376 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKG 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 276 IALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNY--------QDIRYMGSLSWQLPITTGCF 347
Cdd:PRK07376 319 LAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKYMPITAITF 398
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2482671423 348 NVANLALCGMPFLAGYYSKDLILEVVMlsNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEF 409
Cdd:PRK07376 399 LIGCLAISGIPPFAGFWSKDEILGAAF--EANPALWFVGFLTAGMTAFYMFRMYFLTFEGEF 458
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
108-379 |
1.47e-50 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 175.96 E-value: 1.47e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 108 SPNIISILLGWDGLGLVSYCLVIYYQNW-KSYGAGMLTALSNRIGDVALLMTIAWMLNLGSWNFIYYIDILHFEVWG--- 183
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSpRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 184 -FMIVILVVLAALTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMI-SMITMF 260
Cdd:pfam00361 81 lLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIQQILLIlAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 261 MSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQS---KLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRYMGSLS 337
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2482671423 338 WQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMN 379
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWI 281
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
54-372 |
1.98e-50 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 184.78 E-value: 1.98e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 54 LLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQ 133
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 134 N-WKSYGAGMLTALSNRIGDVALLMTIAWML-NLGSWNFI---------------YYIDILHFEVWG--FMIVILVVLAA 194
Cdd:MTH00032 156 TrIQANKAAIKAIVVNRVGDVGVILGMVLIYkTIGSLDFLtfnggsvgsgimdrgYYGGGAYESPLApfAIIGILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 195 LTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKK 274
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKK 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 275 IIALSTLSQLGLMMGSIAI-GQSKLAFFHLLTHALFKALLFMCAGAIIHNMK-NYQDIRYMGSLSWQLPITTGCFNVANL 352
Cdd:MTH00032 316 VIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330 340
....*....|....*....|
gi 2482671423 353 ALCGMPFLAGYYSKDLILEV 372
Cdd:MTH00032 396 SIMGLPYLTGFYSKDLILEL 415
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
43-400 |
1.18e-48 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 182.16 E-value: 1.18e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 43 FTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLG 122
Cdd:PRK12650 64 LLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 123 LVSYCLVIYYQNWKSYGAgMLTALSNRIGDVALLMTIAWMLN-LGSWNFIyyiDILHFEVWG------FMIVILVVLAAL 195
Cdd:PRK12650 144 LASFFLIARSGSGGEAGS-IRTLILTFFGGLTLLAAVAIAATqTGTTSLS---GILHSDVWAekpgltTVVAVLIAVAAF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 196 TKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKI 275
Cdd:PRK12650 220 TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 276 IALSTLSQLGLMMGSIAIGQS---KLAFFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNVANL 352
Cdd:PRK12650 300 TAYSTVSQLGWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRRMPFTFVSVTIAAL 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2482671423 353 ALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGL----TVCYSLRL 400
Cdd:PRK12650 379 SMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALgavfTFAYSARL 430
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-374 |
2.87e-44 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 168.17 E-value: 2.87e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 47 STSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSY 126
Cdd:PRK12647 53 SLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 127 CLVIY-YQNWKSYGAGMLTALSNRIGDVALLmtiAWMLNLGSWNFIYYI-------DILHFEVWGFMIVILVVLAALTKS 198
Cdd:PRK12647 133 LLIGFnHEREAARRAALQALLVTGGGGLALL---AGLILLGNVTGTYSLsellasgDVIREHPLYLAILLLVLGGAFTKS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 199 AQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLIS-MYSYMVSgLIMISMITMFMSGIGANLEYDLKKIIA 277
Cdd:PRK12647 210 AQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGgTPLWQTI-LPLFGGLTMLTGALLAVRQTDLKLILA 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 278 LSTLSQLGLMMGSIAIGQS---KLAFFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNVANLAL 354
Cdd:PRK12647 289 YSTVSALGTLVMLLGLGSElaiKAAVLFLVAHSLYKGALFMVAGIIDHETGT-RDITKLGGLRRAMPITAAAALLAALSM 367
|
330 340
....*....|....*....|
gi 2482671423 355 CGMPFLAGYYSKDLILEVVM 374
Cdd:PRK12647 368 AGLPPLFGFLAKELIYEALL 387
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
53-400 |
2.35e-43 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 160.31 E-value: 2.35e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 53 TLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYY 132
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 133 QNWKSYGAGMLTALSNRIGDVALLMTIAWM-LNLGSWNFIYYIDILHF--EVWGFMIVILVVLAALTKSAQIPFSSWLPA 209
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLyGATGTLNMADLAARLAEldPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 210 AMA-APTPVSALVhSSTLVTAGVYLLIRFSNLI--SMYSYMVSGLIMI-SMITMFMSGIGANLEYDLKKIIALSTLSQLG 285
Cdd:COG0651 231 AYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVlGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 286 LMMGSIAIGQSKL---AFFHLLTHALFKALLFMCAGAIIHnMKNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAG 362
Cdd:COG0651 310 YILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIER-ATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350
....*....|....*....|....*....|....*...
gi 2482671423 363 YYSKDLILEVVMLSNMnIFIFFLFIFSTGLTVCYSLRL 400
Cdd:COG0651 389 FVSKWLLLQAALEAGA-WLLAAVLLLSSLLTLAYFVRI 425
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
53-435 |
9.04e-42 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 161.17 E-value: 9.04e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 53 TLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYY 132
Cdd:TIGR00940 70 TLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 133 -QNWKSYGAGMLTALSNRIGDVALLMTIAWM-LNLGSWNFIYYID----ILHFEVWGFmIVILVVLAALTKSAQIPFSSW 206
Cdd:TIGR00940 150 hHRAHSRYGAQKSLTITVFGGLAMLGGLILLgKITGSFSIDAVIAsadaIRNSPLFGT-AMVLVLLGAFTKSAQFPFHIW 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 207 LPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGL 286
Cdd:TIGR00940 229 LPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 287 MMGSIAIGQSKL----------------AFFHLLTHALFKALLFMCAGAIIHNmKNYQDIRYMGSLSWQLPITTGCFNVA 350
Cdd:TIGR00940 309 IMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIA 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 351 NLALCGMPFLAGYYSKDLILEVVM---------LSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNfISGYSVRDHS 421
Cdd:TIGR00940 388 SAAMAGVPPFNGFLSKEMFFAEAItahlvnpfdTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFGRPK-PEDLPRKPHE 466
|
410
....*....|....
gi 2482671423 422 GPMLsMMVILMIMA 435
Cdd:TIGR00940 467 PPRW-MLASPDILV 479
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
73-370 |
1.77e-41 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 159.67 E-value: 1.77e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 73 LIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTA-LSNRIG 151
Cdd:CHL00025 106 LVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAfVTNRVG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 152 DVALLMTIA---WMLnlGSWNFIYYIDILH-----FEVWGF---MIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSAL 220
Cdd:CHL00025 186 DFGLLLGILgfyWIT--GSFEFRDLFEIFNnliynNEVNLLfatLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISAL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 221 VHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAF 300
Cdd:CHL00025 264 IHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAAL 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2482671423 301 FHLLTHALFKALLFMCAGAIIHNM---------KNyQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLIL 370
Cdd:CHL00025 344 FHLITHAYSKALLFLGSGSVIHSMepivgyspdKS-QNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL 421
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
14-400 |
2.15e-41 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 156.96 E-value: 2.15e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 14 MLFVLSVMSSVSGFYMISCDYVIFIEWEVFTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFII 93
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 94 LVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLNLGSWNFIyy 173
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSFL-- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 174 idilhfevWGFMIVILVvlaaLTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISmYSYMVSGLIM 253
Cdd:MTH00063 159 --------CCLFFFLIV----FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLG-FSWLSIFFSV 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 254 ISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRY- 332
Cdd:MTH00063 226 LLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNCv 305
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2482671423 333 MGSLSWQLPITTGCFNVAnLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRL 400
Cdd:MTH00063 306 YSSILYGSWNLFYLFLLV-LGLSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL 372
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
54-371 |
1.75e-40 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 157.22 E-value: 1.75e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 54 LLFDWMSLIFMGFVMFISSLIVYYSGEYM-YGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYy 132
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISY- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 133 qnWKSYGAGMLTALSNRI----GDVALLMTIAWMLNLGSWNFIYYI----DILHFEVWGFMIVILVVLAALTKSAQIPFS 204
Cdd:PRK12646 153 --WYNNGDSQFGAIQSFMitvfGGLALLVGFIMLYIMTGTNNITEIlgqaDHIKNHGLFIPMIFMFLLGAFTKSAQFPFH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 205 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQL 284
Cdd:PRK12646 231 IWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 285 GLMMGSIAIG-------QSKLA----------FFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCF 347
Cdd:PRK12646 311 GMIMAMVGIGggyaqhqQDAIAsiyvfvlfaaLFHLMNHAIFKCALFMGVGIIDHEAGT-RDIRILSGMRQLFPKMNLVM 389
|
330 340
....*....|....*....|....
gi 2482671423 348 NVANLALCGMPFLAGYYSKDLILE 371
Cdd:PRK12646 390 TIAALSMAGVPFLNGFLSKEMFLD 413
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-399 |
4.37e-40 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 156.50 E-value: 4.37e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 53 TLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYY 132
Cdd:PRK12648 71 SLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 133 QNWKS--YGAGMLTALSNrIGDVALLmtiAWMLNLGswnfiyYI-------------DILHFEVWGFMIVILVVLAALTK 197
Cdd:PRK12648 151 HHRADarRGARMALTVTG-AGGLALL---AGVLLLG------HIvgsydldvvlaagDLIRAHPLYPPALVLILLGAFTK 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 198 SAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLIS---MYSYMVSGlimISMITMFMSGIGANLEYDLKK 274
Cdd:PRK12648 221 SAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAgteEWFWIVGG---AGLITLLLGAYFALFQHDLKG 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 275 IIALSTLSQLGLMMGSIAIGqSKLA----FFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNVA 350
Cdd:PRK12648 298 LLAYSTISHLGLITLLLGLG-SPLAavaaIFHIINHATFKASLFMAAGIIDHETGT-RDMRRLSGLRRLMPITATLAMVA 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2482671423 351 NLALCGMPFLAGYYSKDL----ILEVVMLSNMNIFIFFLFIFSTGLTVCYSLR 399
Cdd:PRK12648 376 AAAMAGVPLLNGFLSKEMffaeTLDTHLLGSLDWLLPVAATLAGAFSVAYSLR 428
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
13-370 |
2.91e-38 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 147.04 E-value: 2.91e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 13 MMLFVLSVMSSVSGFYMISCDYVIFIEWEVFTLNSTSVvMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMY-------GD 85
Cdd:PRK06525 31 VLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGDVAL-FGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 86 VYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAWM-LN 164
Cdd:PRK06525 110 EGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLfLQ 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 165 LGSWNFiYYIDILHFEVwGFMIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFsnLISMY 244
Cdd:PRK06525 190 TGTFAL-SALSGLHGSL-KYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMG 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 245 SY-MVSGLIMISM--ITMFMSGIGANLEYDLKKIIALSTLSQLGLM-MG-SIAIGQSKLAF----FHLLTHALFKALLFM 315
Cdd:PRK06525 266 PIpHVIGYVGAVMaiVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMfFGlSLAILGSRLALegsiAYIFNHAFAKSLFFL 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2482671423 316 CAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLIL 370
Cdd:PRK06525 346 VAGALSYSCGT-RLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIF 399
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-399 |
5.02e-36 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 144.30 E-value: 5.02e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 47 STSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYM-YGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVS 125
Cdd:PRK12644 63 SLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFdDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 126 YCLVIYYQNWK-SYGAGMLTALSNRIGDVALLMTIawmLNLGSWNFIYYI-DILHFEVWGFMIVILVVL---AALTKSAQ 200
Cdd:PRK12644 143 FLLIGHYAERAaSRRAALQALLVTTAGGLAMLVGI---IILGQAAGTYRLsELLADPPTGPAVSVAVVLilvGALSKSAI 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 201 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS---NLISMYSYMVSGLimiSMITMFMSGIGANLEYDLKKIIA 277
Cdd:PRK12644 220 VPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLApgfADVPVWRPTVLVL---GLATMLLGGWRALRQHDLKLILA 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 278 LSTLSQLGLMMGSIAIGQSKLAFFHL---LTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNVANLAL 354
Cdd:PRK12644 297 YGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT-RDIRKLSGLGRRQPVLAVVAALAAASM 375
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2482671423 355 CGMPFLAGYYSKDLILEVV----MLSNMNIFIFFLFIFSTGLTVCYSLR 399
Cdd:PRK12644 376 AGLPPLLGFVAKEAALEAVlhdgALGPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
53-373 |
9.45e-34 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 136.98 E-value: 9.45e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 53 TLLFDWMSLIFMGFVMFISSLIVYYSGEYM-YGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIY 131
Cdd:PRK12645 73 TLYVDGLSLLFALLITGIGSLVVLYSIYYLsKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 132 -YQNWKS-YGAG---MLTALsnriGDVALLMTIAwMLNLGSWNF-----IYYIDILHFEVWGFMIVILVVLAALTKSAQI 201
Cdd:PRK12645 153 wYEREASrYGAQksmLITVF----GGLSMLGGFI-LLYIMTGSFsiremIANADEIQNSPLFIPAMILILLGAFTKSAQF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 202 PFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTL 281
Cdd:PRK12645 228 PFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTV 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 282 SQLGLMMGSIAIGQSKL----------------AFFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTG 345
Cdd:PRK12645 308 SQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHETGT-RDIRKLGGLMTIMPITFT 386
|
330 340
....*....|....*....|....*...
gi 2482671423 346 CFNVANLALCGMPFLAGYYSKDLILEVV 373
Cdd:PRK12645 387 IALIGALSMAGLPPFNGFLSKEMFFESM 414
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
396-575 |
2.13e-32 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 123.04 E-value: 2.13e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 396 YSLRLSYYSMVGEFNFISGYSVRDHSGPMLSMMVILMIMAITGGSLLSWSFFISPTMICLPWFLKMLITVVILVGGVGGY 475
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 476 FLSKMLSFVVNLLRYYWGMVFLGSMWFMPGLSTQGVSMLPLILGAQLPSVVDQGWSEEWGGQKLYKWFLDLSQLVQWLQD 555
Cdd:pfam06455 81 ELSNLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
170 180
....*....|....*....|
gi 2482671423 556 NSLKIYLLSFVFWVMIMLFM 575
Cdd:pfam06455 161 GLIKIYLLSFLLWLLLLLLL 180
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
45-371 |
3.34e-32 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 132.26 E-value: 3.34e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 45 LNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLV 124
Cdd:PRK12649 67 LPSAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSIT 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 125 SYCLVIYYQNWKS--YGAG---MLTALSNRIGDVALLM--------TIAWMLNLGSwnfiyYIDILHFEVWGFMIVILVV 191
Cdd:PRK12649 147 SFMLIGYWRHRPEsvYGATkslLITAGGGLFMFAGFLLlhvitgtyDIATILQDSE-----LIENIKGHPLFLITLILIF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 192 LAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLIS---MYSYMVSGlimISMITMFMSGIGANL 268
Cdd:PRK12649 222 IGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSgteAWFILVSG---TGMITMVLAGFLAFR 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 269 EYDLKKIIALSTLSQLGLMM---GSIAIGQSKLAF----FHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLP 341
Cdd:PRK12649 299 QTDIKAILAYSTISQLAYLMtmyGYTTYHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMP 377
|
330 340 350
....*....|....*....|....*....|
gi 2482671423 342 ITTGCFNVANLALCGMPFLAGYYSKDLILE 371
Cdd:PRK12649 378 ITFIVASIAALAMAGIPPLNGFLSKEMFYE 407
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-436 |
6.49e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 126.15 E-value: 6.49e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 57 DWMSLIFMGFVMFISSLIVYYSgeYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWK 136
Cdd:PRK08375 76 DSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 137 SYGAGMLTALSNRIGDVALLMTIAWMLNL-GSWNFIYYIDILHFEVWGFMIVILVVLAALTKSAQIPFSSWLPAAMAAPT 215
Cdd:PRK08375 154 ALAAARKYLIVGLIGSTFLLIGVGLLYGVtGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAP 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 216 PVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSG-----LIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGS 290
Cdd:PRK08375 234 PVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFALglgwlLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLG 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 291 IAIGQSKL---AFFHLLTHALFKALLFMCAGAIIHNMkNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKD 367
Cdd:PRK08375 314 LALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTY-GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKW 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2482671423 368 LILEVVMLSNMnIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFnfiSGYSVRDHSGPMLSMMVILMIMAI 436
Cdd:PRK08375 393 YLVVGAVEAGQ-WLVLAVLLASSLLALLYFLRIWYRAFFGPP---PPGSEAPKQEAPLGMLAPSLALAL 457
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
97-376 |
3.63e-23 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 103.81 E-value: 3.63e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 97 LFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKS-YGAGMLTALSNRIGDVALLMTIAWML-NLGSWNFIYYI 174
Cdd:PRK06521 121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEiRRAGFLYLLMAHAGALAILLAFGLLArESGSYDFAAMR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 175 DILHFEVWGFMIVILVVLAALTKSAQIPFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSNLISMYSYMVSGLIM 253
Cdd:PRK06521 201 AAHLSPFWASLVFLLALFGFGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWWGVLV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 254 ISM--ITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGS-------IAIGQSKLA-------FFHLLTHALFKALLFMCA 317
Cdd:PRK06521 280 LALgaISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlglamvfIAYGMPLLAalaltaaLYHLLNHALFKSLLFLGA 359
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2482671423 318 GAIIHNMKNyQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLS 376
Cdd:PRK06521 360 GAVLHATGT-RDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLSS 417
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-436 |
5.53e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 102.74 E-value: 5.53e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 57 DWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWK 136
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 137 -SYGAGMLTALSNRIGDVALLMTIAWM------LNL--------GSWNFIYYIDILHFEVWGFMIVILVVLAALTKSAQI 201
Cdd:PRK12667 161 dAVEAAIKYALIGAVGTTLYFLALAFLyatfgtLNMadlsakirGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 202 PFSSWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF-------SNLISMYSYMVSGLIMI-SMITMFMSGIGANLEYDL 272
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIIlGAVSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 273 KKIIALSTLSQLGLMMGSIAIGQS---KLAFFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNV 349
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 350 ANLALCGMPFLAGYYSKDLILEVVMLSNMnIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNFISGYSVRDH---SGPMLS 426
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESGF-YLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKESpsmSVVILV 477
|
410
....*....|
gi 2482671423 427 MMVILMIMAI 436
Cdd:PRK12667 478 LALAVLILGI 487
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
146-365 |
5.84e-23 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 103.07 E-value: 5.84e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 146 LSNRIGDVALLMTIAWMLNL-GSWNFIyyidilHFEVWGFMIVILVVLAALT----------KSAQIPFSSWLPAAMAAP 214
Cdd:PRK07390 178 LTKRVGDLLLLMGVVALSPLaGTLNFS------DLAAWAATANLDPLTATLLglaliagptgKCAQFPLHLWLDEAMEGP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 215 TPVSALvHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITmfmsGIGANL----EYDLKKIIALSTLSQLGLMMGS 290
Cdd:PRK07390 252 NPASIL-RNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVT----AIGASLvaiaQIDIKRALSYSTSAYLGLVFIA 326
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2482671423 291 IAIGQSKLAFFHLLTHALFKALLFMCAGAIIHNmKNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYS 365
Cdd:PRK07390 327 VGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-444 |
1.07e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 101.71 E-value: 1.07e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 57 DWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQN-W 135
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDtW 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 136 KSYGAGMLTALSNRIGDVALLMTIAWML-NLGSWNFIYYIDILHFEVWGFMIVILVVLAA--LTKSAQIPFSSWLPAAM- 211
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYgQYGTLNMAYLAVKMSENPTVVAKIALALFIAglAMKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 212 AAPTPVSALVHSSTLvtAGVYLLIR--FSNLISMYSYMVSGLIMI--SMITMFMSGIGANLEYDLKKIIALSTLSQLGLM 287
Cdd:PRK08376 249 AAPSSISAMLLVIKQ--AGLYALARvlFSIYGPAINLATVGWVIIilGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 288 MGSIAIGQSKL---------------AFFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNVANL 352
Cdd:PRK08376 327 LLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 353 ALCGMPFLAGYYSKDLILEVVMLsnMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNfISGYSVRDHSGPMLSMMVILM 432
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFHTAFFGPPS-EKVMNVKEPPKPMLVPMLILA 482
|
410
....*....|..
gi 2482671423 433 ImAITGGSLLSW 444
Cdd:PRK08376 483 I-AIIGMGLFPW 493
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
59-318 |
1.69e-22 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 101.31 E-value: 1.69e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 59 MSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIiLVLLFVLSMMF-LIISPNIISILLGWDGLGLVSYCLVIYYQNWKs 137
Cdd:PRK08168 70 LGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYV-RALAGVLAAVHlLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP- 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 138 ygAGMLTA----LSNRIGDVALLMTIA-WMLNLGSWNfiyyIDILHFEVWGFMI-------VILVVLAALTKSAQIPFSS 205
Cdd:PRK08168 148 --FARLAAhkkfIADRLAELLLLAAAAlAYLEVGSLS----LSALWAHLAAQGAspslqaaALLLVLAVILKTAQLPVHG 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 206 WLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLG 285
Cdd:PRK08168 222 WLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMG 300
|
250 260 270
....*....|....*....|....*....|...
gi 2482671423 286 LMMGSIAIGQSKLAFFHLLTHALFKALLFMCAG 318
Cdd:PRK08168 301 FMLLECGLGLYELALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
52-371 |
2.51e-22 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 101.35 E-value: 2.51e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 52 MTLLFDWMSLIFMGFVMFISSLIVYYSGEY---MYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCL 128
Cdd:PRK08667 71 ITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 129 VIY-YQNWKSYGAGMLTALSNRIGDVAL-LMTIAWMLNLGSWNFiyyiDILHFEVWGFMIV-ILVVLAALTKSAQIPFSS 205
Cdd:PRK08667 151 VMNdYQEEETQRAGIFYFVMTQLSTVFLmLGIIVLFIQTGSFEL----SPLGASAGILSLVfLLLFLGFGIKAGIIPFHK 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 206 WLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFsnLISMYS---YMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTL 281
Cdd:PRK08667 227 WLPYAHpASPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSpelWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 282 SQLGLMMGSIAI-------GQSKLAF-------FHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCF 347
Cdd:PRK08667 304 ENIGIILMGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALF 382
|
330 340
....*....|....*....|....
gi 2482671423 348 NVANLALCGMPFLAGYYSKDLILE 371
Cdd:PRK08667 383 LVGAVSIAALPPFNGFASELLLYE 406
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
61-400 |
1.40e-21 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 97.96 E-value: 1.40e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 61 LIFMGFVMFISSLIVYYSGEYMYGDV--YINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSY 138
Cdd:PRK06589 86 LIFLLLIGFLWICALLYTPKYLAINNidSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 139 GAGmLTALSNRIGDVALLMTIAWMLNLGSWNFIYYIDILHFEVWGFMIVILVVLAALTKSAQIPFSSWLPAAMAAPTPVS 218
Cdd:PRK06589 166 SGG-YKYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVS 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 219 ALVHSSTLVTAGVYLLIRFSNLISMYSYMV------SGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIA 292
Cdd:PRK06589 245 ALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAF 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 293 IGQSK---LAFFHLLTHALFKALLFMCAGAIIhNMKNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLI 369
Cdd:PRK06589 325 ILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLI 403
|
330 340 350
....*....|....*....|....*....|.
gi 2482671423 370 LEVVMLSNMNIFIFFLFIFSTGLTVCYSLRL 400
Cdd:PRK06589 404 LLAASEQNQPWLSIIVMLVVIASSILSALYL 434
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
112-436 |
6.32e-20 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 93.42 E-value: 6.32e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 112 ISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAW-MLNLGSWNFIYYIDILHFEVWgfmiviLV 190
Cdd:PRK12668 116 LTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLhYAETGSFAFGAIAGLGGTAAW------LI 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 191 VLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR----FSNLISMysymvsGLIMismiTMFmsGIG- 265
Cdd:PRK12668 190 LIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARafpgTELLIYI------GAAM----AVY--GVFf 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 266 ANLEYDLKKIIALSTLSQLGLMMGSIAIGqSKL----AFFHLLTHALFKALLFMCAGAIIHnMKNYQDIRYMGSLSWQLP 341
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAGIGIG-TALaingAVAHAFNHILYKGLLFMSAGAVLY-RTGTEKLTELGGLYRSMP 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 342 ITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEfnfISGYSVRDHS 421
Cdd:PRK12668 336 LTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLASAGTFLHFGIKLPYFAFFGG---DSGLRVKDAP 412
|
330
....*....|....*
gi 2482671423 422 GPMLSMMVILMIMAI 436
Cdd:PRK12668 413 RNMLVAMGIAAFLCI 427
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
189-371 |
7.92e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 92.71 E-value: 7.92e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 189 LVVLAALTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSnLISMYSYMVsgLIMISMITMFMSGIGANL 268
Cdd:PRK07234 189 LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCA-LDVPGLDLI--VRIFGVGTALLGVLFALL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 269 EYDLKKIIALSTLSQLGLMMGSIAIGqsklAFFHlLTHALFKALLFMCAGAiIHNMKNYQDIRYMGSLSWQLPITTGCFN 348
Cdd:PRK07234 266 EKDLKRMLAFSTISQLGFILAAPLVG----GLYA-LAHGLVKSTLFLCAGA-LPSRNFTELISQMLGIGKWIPLTMASFS 339
|
170 180
....*....|....*....|...
gi 2482671423 349 VAnlalcGMPFLAGYYSKDLILE 371
Cdd:PRK07234 340 IA-----GFPLLAGFVSKVLTLK 357
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
1-436 |
2.66e-19 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 91.60 E-value: 2.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 1 MFLLLTVDKISSMMLFVLSVMSSVSG--FYMISCDYVIFIEW-----EVFTLNSTSVVMTLLFDW--MSLIFMGFVMFIS 71
Cdd:PRK08668 3 LTLLLLTPLIGSVLAYLLKKINEKIGviGNALPLLFLIKLYFtlkvgTGEKLTLFFGGFKLTFTLthLSWFFAMISLLVI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 72 SLIVYYSGEY-MYGDVYINRFIILVLLFVLSMMFliiSPNIISILLGWDGLGLVSYcLVIYYQNWKSYGAGMLTALSNRI 150
Cdd:PRK08668 83 FSVAFFMVSEkTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 151 GDVALLMTIAWMLN-LGSWNFIYYIDILHFEV---WGFMIVILVVLAALTKSAQIPFSSWLPAAMA-APTPVSAlVHSST 225
Cdd:PRK08668 159 GAYAMLYAIFLIYAkTGTFDFADISQGLINDTstgFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 226 LVTAGVYLLIrfsnlISMYSYMVSGL-----------------IMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMM 288
Cdd:PRK08668 238 LSKLGAYGFL-----LVLYVLPGTKLfsefgtyrgvplfnyilAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYIL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 289 GSIAIGQS---KLAFFHLLTHALFKALLFMCAGAIIHNMKNYQdIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYS 365
Cdd:PRK08668 313 VGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFAS 391
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2482671423 366 KDLILEVVMLSNMNIFIFFLFIFSTGLTVcYSLRLSYYSMVGEFNfISGYSVRDHSGPMLSMMVILMIMAI 436
Cdd:PRK08668 392 KWLIFEALISKGMPITAFMAFFGSIGSFL-YVFRPLAGVFLGQLP-SDHKDVKEAPLPMLIPMAILVLLNV 460
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
43-321 |
1.35e-17 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 85.86 E-value: 1.35e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 43 FTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGD-VYINRFIILVL-LFVLSMMFLiiSPNIISILLGWdG 120
Cdd:PRK08601 57 IGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDrSYRKYFALFTFtTGFASLAWL--SGDLRLMALCW-G 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 121 LGLVSYCLVIYYQN-WK-SYGAGMLTALSNRIGDVALLMTIAWMLNL-GSWNF---IYYIDILHFEVW-GFMIVILVVLA 193
Cdd:PRK08601 134 ATLLGLTLLIGLNKgWKvAREAAKISGMLFLISWLALALAIVWLFIAtGEWQLtsvLSNENLAQLGTWeKTGINLLLILA 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 194 ALTKSAQIPFSSWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSNLISmYSYMVSGLIMISMITMFMsGIGANL-EYDL 272
Cdd:PRK08601 214 VMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLI-GTGISLvQVDY 290
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2482671423 273 KKIIALSTLSQLGLMMGSIAIGQSKLAFFHLLTHALFKALLFMCAGAII 321
Cdd:PRK08601 291 KRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
53-374 |
1.35e-15 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 79.39 E-value: 1.35e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 53 TLLFDWMSLIFMGFVMFISSLIVYYSGEYMYG-DVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLV-I 130
Cdd:COG1007 65 MFVVDGFALFFKLLILLAALLVLLLSRDYLERrGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVaF 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 131 YYQNWKSYGAGM----LTALSNRIgdvaLLMTIAWMLNL-GSWNF---IYYIDILHFEVWGFMIVILVVLAALT-KSAQI 201
Cdd:COG1007 145 RRDDRRSSEAALkyflLGALSSGF----LLYGISLLYGAtGSLNLagiAAALAAGGANSPLLLLGLVLVLAGLAfKLSAV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 202 PFSSWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFSN--LISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIA 277
Cdd:COG1007 221 PFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVeaFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 278 LSTLSQLG-LMMGSIAIGQS--KLAFFHLLTHALFKALLFMCAGAIIHNMKNYQDIRYMGSLSWQLPITTGCFNVANLAL 354
Cdd:COG1007 299 YSSIAHAGyLLLGLAAGTPLgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSL 378
|
330 340
....*....|....*....|
gi 2482671423 355 CGMPFLAGYYSKDLILEVVM 374
Cdd:COG1007 379 AGIPPTAGFFGKFYVFSAAV 398
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
88-370 |
1.36e-13 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 73.26 E-value: 1.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 88 INRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAwmLNLGS 167
Cdd:PRK08377 107 IDKYAMLFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVA--LIYGA 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 168 WNFIYYIDILHFEVWGFMIVILVVLAAL-----TKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSNLI 241
Cdd:PRK08377 185 TGTLNMAHIAQLAGTIDPTVAQVGLALLifglaVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILYLM 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 242 SM---YSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQS---KLAFFHLLTHALFKALLFM 315
Cdd:PRK08377 264 QNangWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFL 343
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2482671423 316 CAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLIL 370
Cdd:PRK08377 344 AVGYVGITLGG-TEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
202-439 |
3.09e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 72.04 E-value: 3.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 202 PFSSWLP-AAMAAPTPVSALvHSSTLVTAGVYLLIRFSnlISMY---SYMVSGLIMI-SMITMFMSGIGANLEYDLKKII 276
Cdd:COG1008 227 PFHTWLPdAHVEAPTAGSVL-LAGVLLKMGGYGLLRFA--LPLFpeaSAYFAPLLAAlGVIGIIYGALVALAQTDLKRLI 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 277 ALSTLSQLGLMMGSIAIGqSKLAF----FHLLTHALFKALLFMCAGAIIHNMKNYqDIRYMGSLSWQLPITTGCFNVANL 352
Cdd:COG1008 304 AYSSVSHMGFVLLGIFAL-NPLGLqgavLQMVSHGLITAALFLLVGVLYDRTHTR-DIADLGGLAKRMPVLAALFLLAAL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 353 ALCGMPFLAGYYSKDLILEVVMLSNMniFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNfISGYSVRDHSGPMLSMMVILM 432
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVLLGAFQVNP--WLAILAALGLILTAAYLLWMYQRVFFGPLK-EELAELPDLNPRELAVLAPLA 458
|
....*..
gi 2482671423 433 IMAITGG 439
Cdd:COG1008 459 ALILLLG 465
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-371 |
8.61e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 70.75 E-value: 8.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 186 IVILVVLAalTKSAQIPFSSWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSNLISMYSYMVSGLIM--ISMITMFMS 262
Cdd:PRK07691 213 ILFLFVFA--TKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFTHYLIliLALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 263 GIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKL---AFFHLLTHALFKALLFMCAGAIIHnMKNYQDIRYMGSLSWQ 339
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKR 368
|
170 180 190
....*....|....*....|....*....|..
gi 2482671423 340 LPITTGCFNVANLALCGMPFLAGYYSKDLILE 371
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
185-370 |
1.25e-12 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 70.36 E-value: 1.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 185 MIVILVVLAALTKSAQIPFSsWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISM--ITMFMS 262
Cdd:PRK12663 208 TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMaaITMVIG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 263 GIGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKL---AFFHLLTHALFKALLFMCAGAIIHnMKNYQDIRYMGSLSWQ 339
Cdd:PRK12663 287 ALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRK 365
|
170 180 190
....*....|....*....|....*....|.
gi 2482671423 340 LPITTGCFNVANLALCGMPFLAGYYSKDLIL 370
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLV 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-436 |
4.83e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 68.43 E-value: 4.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 57 DWMSLIFMGFVMFISSLIVYYSGEYMygDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWK 136
Cdd:TIGR01972 76 DGISLLLVLLTALLTLLAILASWESI--QKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 137 SYGAGMLTALSNRIGDVALLMTIAWMLNLGSWNFIYYIDILH-FEVWGFMIVILVVLAALT-KSAQIPFSSWLPAAMA-A 213
Cdd:TIGR01972 154 RIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLpLPFGVQTWLFLAFFIAFAvKVPLFPLHTWLPDAHVeA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 214 PTPVSALVhSSTLVTAGVYLLIRFS-NLISMYSYMVSGLIMI-SMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMGSI 291
Cdd:TIGR01972 234 PTAGSVIL-AGVLLKMGTYGFLRFNlPLFPDASLYFAPVLAAlGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 292 AIGQS---KLAFFHLLTHALFKALLFMCAGAIIHNMKNYqDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDL 368
Cdd:TIGR01972 313 FSFNElgiSGAVFQMISHGLITAALFLLVGVLYERAHTR-DIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2482671423 369 ILevVMLSNMNIFIFFLFIFSTGLTVCYSLRLSYYSMVGEFNFISGYSVRDHSGPMLSMMVILMIMAI 436
Cdd:TIGR01972 392 IL--LGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDLNGREIAVLAPLVVLIL 457
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
201-363 |
1.58e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 63.69 E-value: 1.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 201 IPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSnLISMYSYMVSG--LIMISMITMFMSGIGANLEYDLKKIIA 277
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLS-LLGGNAPLWWGvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 278 LSTLSQLGLMM-------GSIAIGQSKL-------AFFHLLTHALFKALLFMCAGAIIHNMkNYQDIRYMGSLSWQLPIT 343
Cdd:PRK08042 275 YHTLENIGIILlglgagvTGIALEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWFRT-GHRDIEKLGGIGKKMPVI 353
|
170 180
....*....|....*....|
gi 2482671423 344 TGCFNVANLALCGMPFLAGY 363
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGF 373
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
188-370 |
1.64e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 63.62 E-value: 1.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 188 ILVVLAALTKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSNLI---SMYSYMVSGLIMISMITMFMSG 263
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqsGAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 264 IGANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKLAF---FHLLTHALFKALLFMCAGaIIHNMKNYQDIRYMGSLSWQL 340
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQ 367
|
170 180 190
....*....|....*....|....*....|
gi 2482671423 341 PITTGCFNVANLALCGMPFLAGYYSKDLIL 370
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKFFIL 397
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
182-370 |
2.04e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 60.22 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 182 WGFMIVILVvlaaltKSAQIPFSSWLPAAMA-APTPVSALvHSSTLVTAGVYLLIRFS-NLISMYSYMVSGLIMI-SMIT 258
Cdd:PRK05846 215 LAFFIAFAV------KMPMFPLHTWLPDAHVqAPTAGSVL-LAGILLKMGAYGLLRFSlPLFPDASHEFAPIIITlGVIA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 259 MFMSGIGANLEYDLKKIIALSTLSQLGLMMGSI----AIGQSKlAFFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMG 334
Cdd:PRK05846 288 IIYGALVALAQTDIKKLIAYSSISHMGFVTLGIfagnQLGIQG-AIFQMISHGLSSAALFLLVGVLYDRLHT-RDIADYG 365
|
170 180 190
....*....|....*....|....*....|....*.
gi 2482671423 335 SLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLIL 370
Cdd:PRK05846 366 GLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
196-374 |
2.64e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.48 E-value: 2.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 196 TKSAQIPFSSWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSNLI--SMYSYMVSGLIMI-SMITMFMSGIGANLEYD 271
Cdd:PRK06458 226 TKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIfGLLSVLVAAFFLLRQRD 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 272 LKKIIALSTLSQLGLMMGSIAIGQSkLAFF----HLLTHALFKALLFmCAGAIIHNMKNYQDIRYMGSLSWQLPITTGCF 347
Cdd:PRK06458 305 IKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSLTKSAIF-FASGNVLQKYGTRDINVIRGLLKVSPLTGWGL 382
|
170 180
....*....|....*....|....*..
gi 2482671423 348 NVANLALCGMPFLAGYYSKDLILEVVM 374
Cdd:PRK06458 383 MLGALAIAGMPPFGVFISEFLILTAGL 409
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
192-370 |
3.73e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 56.01 E-value: 3.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 192 LAALTKSAQIPFSSWLPAA-MAAPTPVSALVHSSTLVtaGVYLLIRFSNLI------SMYSYMVSGLIMISMITMFMSGI 264
Cdd:PRK12666 218 VVFLIKAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagASAGFGQDWLLPGGLATLAFGAI 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 265 GANLEYDLKKIIALSTLSQLGLMMGSIAIGQSKL---AFFHLLTHALFKALLFMCAGAI----------------IHNMK 325
Cdd:PRK12666 296 GVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeLYDLD 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2482671423 326 NYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGYYSKDLIL 370
Cdd:PRK12666 376 EEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALL 420
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-377 |
3.98e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 55.90 E-value: 3.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 55 LFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQN 134
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 135 WKSYGAGMLTALSNRIG------DVALLMTIAWMLNLGswNFIYYIDILHFEVWGFMIVILVVLAALTKSAQIPFSSWLP 208
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGatfyliGIGFLYAITGTLNMG--DMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 209 AAMAAPTPVSALVHSSTLVTAGVYLLIRF------SNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLS 282
Cdd:PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSIS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 283 QLGLMMGSIAIGQSK---LAFFHLLTHALFKALLFMCAGAIIHNMKNyQDIRYMGSLSWQLPITTGCFNVANLALCGMPF 359
Cdd:PRK12662 314 HIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGT-TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
|
330
....*....|....*...
gi 2482671423 360 LAGYYSKDLILEVVMLSN 377
Cdd:PRK12662 393 TSGFVAKWYILDAFIKSN 410
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-371 |
7.77e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 54.97 E-value: 7.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 186 IVILVVLAalTKSAQIPFSSWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGI 264
Cdd:PRK12665 213 AVLLVAFG--IKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGIL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 265 GANLEYDLKKIIALSTLSQLGLMMGSIAIGqSKL----AFFHLLTHALFKALLFMCAGaIIHNMKNYQDIRYMGSLSWQL 340
Cdd:PRK12665 290 GAIAQSDIKRLLSFTLVSHIGYMVFGIALS-TVAglsgAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKAS 367
|
170 180 190
....*....|....*....|....*....|.
gi 2482671423 341 PITTGCFNVANLALCGMPFLAGYYSKDLILE 371
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
57-366 |
1.02e-07 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 54.62 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 57 DWMSLIFMGFVMFISSLIVYYSGEYMY-GDVYINRFIILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYY-QN 134
Cdd:CHL00049 78 NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTkKD 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 135 WKSYGAGMLTALSNRIGDVALLMTIAWMLNLgSWNFIYYIDILH----------FEVWGFMIVILVVLAalTKSAQIPFS 204
Cdd:CHL00049 158 VRSNEATMKYLLMGGASSSILVYGFSWLYGL-SGGEIELQEIVNglintqmynsPGISIALIFITVGIG--FKLSLAPFH 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 205 SWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSNLISMYSYMVSGLIM--ISMITMFMSGIGANLEYDLKKIIALSTL 281
Cdd:CHL00049 235 QWTPDVYeGSPTPVVAFL-SVTSKVAASALATRIFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 282 SQLGLMMGSIAIGQSKLAFFHLLTHALFkaLLFMCAGA----IIHNMKNYQD-IRYMGSLSWQLPITTGCFNVANLALCG 356
Cdd:CHL00049 314 GQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGG 391
|
330
....*....|
gi 2482671423 357 MPFLAGYYSK 366
Cdd:CHL00049 392 IPPLAGFFGK 401
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
52-378 |
1.74e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 50.80 E-value: 1.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 52 MTLLFDWMSLIFMGFVMFISSLIVY-YSGEYMYGDVYInrfiILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVI 130
Cdd:PRK06277 66 ITYLFNPAKQIIIFVLSLIASLVLItGLGEKKSSGLYV----FLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 131 YYQNWKSYGAGMLTALSNRIGDVALLMTIAWML----NLGSWNFIYYIDILHFEVWGFMIVILVVLAALTKSAQIPFSSW 206
Cdd:PRK06277 142 ASGTEEAYKAALKYMILGNVAGSILLLGIGFLLastgTLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 207 LPAAMAAPTP-VSALVHSSTLVT--AGVYLLIRFSNLISMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQ 283
Cdd:PRK06277 222 KSDIYAKAKPfGSALLQTFSKFVlvALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQ 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 284 LGLMMGSIAIGQS---KLAFFHLLTHALFKALLFMCAGaIIHNMKNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFL 360
Cdd:PRK06277 302 GGYVAAGLALGTPlgiVAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPF 380
|
330
....*....|....*...
gi 2482671423 361 AGYYSKDLILEVVMLSNM 378
Cdd:PRK06277 381 NGFQSKLMLAQAAMQANM 398
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
63-318 |
3.60e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 49.79 E-value: 3.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 63 FMGFVMFISSLIVYYSGEYMYGDVYINRFI-ILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNwKSYGAG 141
Cdd:PRK06459 45 VLSFFSIISTIVWILASLYSIEYDHYGKWLsSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK-NKRPAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 142 MLTALSnRIGDVALLMTIAWMLNL-GSWNFIYyidilhfeVWGFMIVILVVLAALTKSAQIPF--SSWLPAAMA-APTPV 217
Cdd:PRK06459 124 VFMAFG-ELSTVLILAGFAWAFIIsGTTNFSY--------LPSPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 218 SAlVHSSTLVTAGVYLLIRFSNLISMYSYMVSGLIMISM--ITMFMSGIGANLEYDLKKIIALST-------LSQLGLMM 288
Cdd:PRK06459 195 SA-ILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIgaFSILFGALYAYVSENVKGLLAFSTienngaiLVALGLYM 273
|
250 260 270
....*....|....*....|....*....|....*.
gi 2482671423 289 GSIAIGQSKLAFFHL------LTHALFKALLFMCAG 318
Cdd:PRK06459 274 VTKQLITSIEHFSLItvilysFAHSVAKTGLFLSSG 309
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
92-379 |
5.93e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.96 E-value: 5.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 92 IILVLLFVLSMMFLIISPNIISILLGWDGLGLVSYCLVIYYQNWKSYGAGMLTALSNRIGDVALLMTIAWMLNLGSWNFI 171
Cdd:PRK12664 66 MLCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNIGAFIHYACVHFFSGVLLLVGASGQAQNGQYTGY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 172 YYidilhfevWGFMIVILVVLAALtksaqiPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLISMysymvsgL 251
Cdd:PRK12664 146 CK--------LLFMLGLLINCACF------PASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFFSGEEI-------L 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 252 IMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMMgsIAIGQS-------KLAFFHLLTHALFKALLFMCAGAIIHNM 324
Cdd:PRK12664 205 LFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLI--IAIGFSgssgvaiGILILQIVLSVVYQTLLFMVADSVINRT 282
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2482671423 325 KNYqDIRYMGSLsWQLPITTGCFNVANLALCGMPFLAGYYSKDLILEVVMLSNMN 379
Cdd:PRK12664 283 RKF-NLNRVGGL-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
184-369 |
6.65e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 45.85 E-value: 6.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 184 FMIVILVVLAALTKSAQIPFSSWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSN--LISMYSYMVSGLIMISMITMF 260
Cdd:PRK06473 205 LLLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVglFPEAWVYLAPWLATWAVVSVL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 261 MSGIGANLEYDLKKIIALSTLSQLG--LMMGSIAIGQSKL-AFFHLLTHALFKALLFMCAGaIIHNMKNYQDIRYM-GSL 336
Cdd:PRK06473 284 YGASCAIAQKDMKKMVAYSSIGHMGyiLLAAAAATPLSILaAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLrGLL 362
|
170 180 190
....*....|....*....|....*....|....*
gi 2482671423 337 SWQ--LPITTGCFNVANLALCGMPFLAGYYSKDLI 369
Cdd:PRK06473 363 NPErgLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
43-91 |
1.37e-04 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 39.72 E-value: 1.37e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2482671423 43 FTLNSTSVVMTLLFDWMSLIFMGFVMFISSLIVYYSGEYMYGDVYINRF 91
Cdd:pfam00662 2 LSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
201-371 |
1.92e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 40.85 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 201 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSNLI--SMYSYMVSGLIMISMITMFMSGIGANLEYDLKKIIAL 278
Cdd:PRK07363 222 VPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLfpQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAY 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 279 STLSQLGLMMGSIAIGQSKL---AFFHLLTHALFKALLFMCAGaIIHNMKNYQDIRYMGSLS---WQLPITTGCFNVANL 352
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGM 380
|
170
....*....|....*....
gi 2482671423 353 ALCGMPFLAGYYSKDLILE 371
Cdd:PRK07363 381 ASAGIPGLVGFVAEFIVFQ 399
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
61-363 |
2.09e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 61 LIFMGFVMFISSLIVYYSGEYMYGDVYInrfIILVLLFVLSMMFLIISPNIISILlgWDGLGLVSYCLV-IYYQNWKSYG 139
Cdd:MTH00226 108 IILTGFIVPCSILISWHSVKYLTKSFLI---CMLILEFLLYAVFSVLDIFMFYIL--FEGVLIPMYLILgIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 140 AGMLTALSNRIGDVALLMTIAWMLNL-GSWNFIYYIDILHF--EVWGFMIVILVVLAALTKSAQIPFSSWLPAAMAAPTP 216
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLYNIhGTTDYLTLASCSHVvsEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPV 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2482671423 217 VSALVHSSTLVTAGVYLLIRFSNLISMYSY--MVSGLIMISMITMFMSGIGANLEYDLKKIIALSTLSQLGLMmgSIAIG 294
Cdd:MTH00226 263 AGSVLLAGILLKLGGYGLVRLSWPILPLGAqnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV--SITLV 340
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2482671423 295 QSKL-----AFFHLLTHALFKALLFMCAgAIIHNMKNYQDIRYMGSLSWQLPITTGCFNVANLALCGMPFLAGY 363
Cdd:MTH00226 341 THDIigltgSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
|
| |
