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Conserved domains on  [gi|2484204879|gb|WFS78637|]
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NADH dehydrogenase subunit 1 [Phyllozelus siccus siccus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 2.73e-140

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 398.37  E-value: 2.73e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   6 VFCVVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  86 LILSLLVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 166 GYELMMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLF 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2484204879 246 CMMFLGGDVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVSVFL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 2.73e-140

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 398.37  E-value: 2.73e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   6 VFCVVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  86 LILSLLVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 166 GYELMMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLF 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2484204879 246 CMMFLGGDVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVSVFL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
14-303 3.90e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 291.30  E-value: 3.90e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  14 LILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILSLLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  94 LIYPMWFGLLT--FNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYELMM 171
Cdd:pfam00146  83 AVIPFGPGLVLadLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 172 FFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2484204879 252 G------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIF 303
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-298 1.47e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 273.16  E-value: 1.47e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   1 MAWL--DVFCVVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLY 78
Cdd:COG1005     1 MSLLlaPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  79 YFCPGLSLILSLLVWLIYPM--WFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALV 156
Cdd:COG1005    81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 157 MLSLVLLVGGYELMMFFEMQY-YVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEY 235
Cdd:COG1005   161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2484204879 236 TSILFMSMLFCMMFLGG------------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSL 298
Cdd:COG1005   241 ANMFLVSALATTLFLGGwlgpfpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 6-311 2.73e-140

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 398.37  E-value: 2.73e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   6 VFCVVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  86 LILSLLVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 166 GYELMMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLF 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2484204879 246 CMMFLGGDVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVSVFL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 7-308 2.61e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 353.02  E-value: 2.61e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   7 FCVVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  87 ILSLLVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGG 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 167 YELMMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFC 246
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2484204879 247 MMFLGGDV-----GSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVS 308
Cdd:MTH00143  241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 11-308 2.19e-120

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 348.18  E-value: 2.19e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  11 FSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILSL 90
Cdd:MTH00225    5 LKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  91 LVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYELM 170
Cdd:MTH00225   85 ILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 171 MFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMFL 250
Cdd:MTH00225  165 DFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 251 GG--DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVS 308
Cdd:MTH00225  245 GGffVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIIL 304
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 12-298 1.18e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 331.47  E-value: 1.18e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  12 SSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILSLL 91
Cdd:MTH00111   10 NPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALT 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  92 VWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYELMM 171
Cdd:MTH00111   90 IWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQT 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 172 FFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMFLG 251
Cdd:MTH00111  170 LATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLN 249

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2484204879 252 GDVGSI---LFPL----KVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSL 298
Cdd:MTH00111  250 PSTLNLppeLFTInlmtKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 14-313 1.42e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 316.18  E-value: 1.42e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  14 LILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILSLLVW 93
Cdd:MTH00071   12 LLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIW 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  94 LIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYELMMFF 173
Cdd:MTH00071   92 TPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFN 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 174 EMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMFLGG- 252
Cdd:MTH00071  172 TTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSt 251

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2484204879 253 ------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVSVFLFS 313
Cdd:MTH00071  252 ynhlqpELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 10-303 1.50e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 315.53  E-value: 1.50e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  10 VFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILS 89
Cdd:MTH00195    5 VIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  90 LLVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYEL 169
Cdd:MTH00195   85 LILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 170 MMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMF 249
Cdd:MTH00195  165 TIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILF 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2484204879 250 LGGDvGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIF 303
Cdd:MTH00195  245 LGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIP 297
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 10-311 7.80e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 313.77  E-value: 7.80e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  10 VFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILS 89
Cdd:MTH00218    5 LINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  90 LLVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYEL 169
Cdd:MTH00218   85 LLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 170 MMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMF 249
Cdd:MTH00218  165 EGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2484204879 250 LGGDVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVSVFL 311
Cdd:MTH00218  245 LGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 14-313 6.61e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 311.56  E-value: 6.61e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  14 LILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILSLLVW 93
Cdd:MTH00104    7 LLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMW 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  94 LIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYELMMFF 173
Cdd:MTH00104   87 IPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLI 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 174 EMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMFLGG- 252
Cdd:MTH00104  167 TTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAf 246

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2484204879 253 ------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVSVFLFS 313
Cdd:MTH00104  247 hnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTAS 313
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 10-309 3.59e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 310.00  E-value: 3.59e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  10 VFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILS 89
Cdd:MTH00134    9 IINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLA 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  90 LLVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYEL 169
Cdd:MTH00134   89 LTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTL 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 170 MMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMF 249
Cdd:MTH00134  169 QTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILF 248

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2484204879 250 LGG-------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVSV 309
Cdd:MTH00134  249 LGAshiptlpELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPI 315
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 4-315 7.81e-103

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 304.21  E-value: 7.81e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   4 LDVFCVVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPG 83
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  84 LSLILSLLVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLL 163
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 164 VGGYELMMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSM 243
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 244 LFCMMFLGGD--------VGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGVSVFLFSYL 315
Cdd:MTH00040  241 LSVILFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILP 320
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 12-305 2.89e-98

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 292.07  E-value: 2.89e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  12 SSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILSLL 91
Cdd:MTH00010    8 SILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  92 VWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYELMM 171
Cdd:MTH00010   88 LWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSK 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 172 FFEMQYYvWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSmLFCMMFLG 251
Cdd:MTH00010  168 IIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMS-LFTSVFFT 245

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2484204879 252 GDVGSILFP-----LKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFL 305
Cdd:MTH00010  246 SFIPSIFISdlmliLKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISI 304
NADHdh pfam00146
NADH dehydrogenase;
14-303 3.90e-98

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 291.30  E-value: 3.90e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  14 LILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILSLLVW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  94 LIYPMWFGLLT--FNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYELMM 171
Cdd:pfam00146  83 AVIPFGPGLVLadLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 172 FFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMFLG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2484204879 252 G------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIF 303
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-298 1.47e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 273.16  E-value: 1.47e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   1 MAWL--DVFCVVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLY 78
Cdd:COG1005     1 MSLLlaPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  79 YFCPGLSLILSLLVWLIYPM--WFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALV 156
Cdd:COG1005    81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 157 MLSLVLLVGGYELMMFFEMQY-YVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEY 235
Cdd:COG1005   161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2484204879 236 TSILFMSMLFCMMFLGG------------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSL 298
Cdd:COG1005   241 ANMFLVSALATTLFLGGwlgpfpilplggLPGILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 9-307 1.16e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 252.73  E-value: 1.16e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   9 VVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLIL 88
Cdd:MTH00054    4 IIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  89 SLLVWLIYPMWFG--LLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGG 166
Cdd:MTH00054   84 AFIAWGVIPYGEGvvLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 167 YELMMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFC 246
Cdd:MTH00054  164 LNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGV 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2484204879 247 MMFLGG----------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGV 307
Cdd:MTH00054  244 ILFLGGwlvisgptsyFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGI 314
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 6-307 3.12e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 251.58  E-value: 3.12e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   6 VFCVVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLS 85
Cdd:MTH00216    5 IIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  86 LILSLLVWLIYPMWFGLLT--FNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLL 163
Cdd:MTH00216   85 FTLALIVWGVIPYERGVLIsdFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLC 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 164 VGGYELMMFFEMQY-YVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMS 242
Cdd:MTH00216  165 VGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMS 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2484204879 243 MLFCMMFLGG--------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFLGV 307
Cdd:MTH00216  245 CLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
9-298 1.04e-81

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 250.11  E-value: 1.04e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   9 VVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLIL 88
Cdd:PRK06076   12 ILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIP 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  89 SLLVWLIYPM--WFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGG 166
Cdd:PRK06076   92 AFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGS 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 167 YELMMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFC 246
Cdd:PRK06076  172 LNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALIT 251

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2484204879 247 MMFLGG----------DVGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSL 298
Cdd:PRK06076  252 TLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 9-307 6.54e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 207.95  E-value: 6.54e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   9 VVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLIL 88
Cdd:MTH00029    9 VTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  89 SLLVWLIYPMWFGLLTFNL--GLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGG 166
Cdd:MTH00029   89 AILAWAIVTMDQGVFLSDLdvGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGS 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 167 YELMMFFEMQYYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFC 246
Cdd:MTH00029  169 LNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMT 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 247 MMFLGG---DVGSILFPLKVVGLS--------------------FIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIF 303
Cdd:MTH00029  249 IFFLGGwlsPLDGIPTPPEAFSIFeqiasskssfwfftkssifiLFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVIL 328


                  ....
gi 2484204879 304 FLGV 307
Cdd:MTH00029  329 TAGI 332
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 14-304 1.59e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 194.73  E-value: 1.59e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  14 LILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILSLLVW 93
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  94 LIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLvggyeLMMFF 173
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLH-----NNSFS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 174 EMQYYVWLFFVsapLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMFLGgd 253
Cdd:MTH00090  158 FVSSFSLSLFV---IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK-- 232

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2484204879 254 vGSILFPLKVVglsFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFF 304
Cdd:MTH00090  233 -FSFLMLFLIF---SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFF 279
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 11-305 2.71e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 173.57  E-value: 2.71e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  11 FSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLILSL 90
Cdd:MTH00058    5 VSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  91 LVWLIYPMWFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGYELM 170
Cdd:MTH00058   85 FYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLV 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 171 MFFEMQYYVWLFFvsAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSMLFCMMFL 250
Cdd:MTH00058  165 DFYYSGWLSVLLF--PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFF 242

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2484204879 251 GGDVGSILFPLKVvglsFIFVWVRGTVPRFRYDKLMYLAWSIFLPVSLNYMIFFL 305
Cdd:MTH00058  243 GGGFVSIMLLFHL----LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 9-298 3.26e-35

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 130.84  E-value: 3.26e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879   9 VVFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPNKVGFVGYGQPFADALKLFTKEQTVPELSNYWLYYFCPGLSLIL 88
Cdd:CHL00032   29 ILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVIS 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  89 SLLVWLIYPmwFG----LLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLV 164
Cdd:CHL00032  109 ILLSYLVIP--FGyhlvLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLS 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 165 GGYELMMFFEMQ----YYVWLFFVSAPLMLIWFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILF 240
Cdd:CHL00032  187 NSLSTVDIVEAQskygFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLV 266

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 241 MSMLFCMMFLGG-----------DVGSILFPLKVVGLS--------------FIFVWVRGTVPRFRYDKLMYLAWSIFLP 295
Cdd:CHL00032  267 SSLFVTVLYLGGwnlsipyifipELFEINKTGGVFGTTigifitlaktylflFISITTRWTLPRLRMDQLLNLGWKFLLP 346


                  ...
gi 2484204879 296 VSL 298
Cdd:CHL00032  347 ISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
10-294 7.66e-24

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 98.72  E-value: 7.66e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  10 VFSSLILIVSVLVGMAFFTLLERSVLGYIQLRKGPnkvgfvGYGQPFADALKLFTKEQTVPELSNyWLYYFCPGLSLILS 89
Cdd:COG0650     4 ILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALAAM 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879  90 LLVWLIYPM--WFGLLTFNLGLLFFLCCTSMGVYSVMIAGWSSNSKYGLLGSMRAVAQTISYEVSLALVMLSLVLLVGGY 167
Cdd:COG0650    77 LLAALLVPVltTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGST 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2484204879 168 ELMMFFEMQYY--VWLFFVSAPLMLI-WFASSLAETNRTPFDFAEGESELVSGFNVEYSGGLFALIFMAEYTSILFMSML 244
Cdd:COG0650   157 SLSDIVAYQAAhgPLLLSPSLLLAAIaFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSL 236

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2484204879 245 FCMMFLGGD------VGSILFPLKVVGLSFIFVWVRGTVPRFRYDKLMYLAWSIFL 294
Cdd:COG0650   237 FVNLFLPWGialtllLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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