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Conserved domains on  [gi|2522682249|gb|WJG36829|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Oedipoda miniata mauritanica]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-123 4.75e-49

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 158.39  E-value: 4.75e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   5 LIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2522682249  85 LMISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVM 119
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-123 4.75e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 158.39  E-value: 4.75e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   5 LIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2522682249  85 LMISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVM 119
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-123 2.74e-26

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 99.82  E-value: 2.74e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   4 DLIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2522682249  84 SLMISLFIWSIFPYTTYMC--SFSYGFLFFLCCTSLSVYTLM 123
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGII 128
NADHdh pfam00146
NADH dehydrogenase;
13-123 3.49e-25

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 96.39  E-value: 3.49e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249  13 LFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFSLMISLFIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2522682249  93 SIFPYTTYM--CSFSYGFLFFLCCTSLSVYTLM 123
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGIL 115
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 5-123 4.75e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 158.39  E-value: 4.75e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   5 LIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFS 84
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2522682249  85 LMISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVM 119
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 6-123 6.70e-40

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 134.78  E-value: 6.70e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   6 IMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFSL 85
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2522682249  86 MISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTIL 118
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 6-123 1.87e-34

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 120.75  E-value: 1.87e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   6 IMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFSL 85
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2522682249  86 MISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVL 118
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-123 2.73e-30

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 110.10  E-value: 2.73e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   7 MFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFSLM 86
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2522682249  87 ISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSIL 117
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 5-123 5.95e-30

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 109.06  E-value: 5.95e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   5 LIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFS 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2522682249  85 LMISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSIL 119
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-123 3.77e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 107.00  E-value: 3.77e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   1 MLYDLIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFS 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2522682249  81 PIFSLMISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSIL 123
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 5-123 4.00e-29

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 106.90  E-value: 4.00e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   5 LIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFS 84
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2522682249  85 LMISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSIL 122
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 5-123 1.39e-28

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 105.38  E-value: 1.39e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   5 LIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFS 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2522682249  85 LMISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSIL 119
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-123 3.94e-28

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 104.32  E-value: 3.94e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   5 LIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFS 84
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2522682249  85 LMISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSIL 122
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 3-123 4.59e-28

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 104.29  E-value: 4.59e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   3 YDLIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPI 82
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2522682249  83 FSLMISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALL 121
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-123 2.72e-27

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 102.51  E-value: 2.72e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   1 MLYDLIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFS 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 2522682249  81 PIFSLMISLFIWSIFPYT--TYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAIL 125
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-123 2.74e-26

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 99.82  E-value: 2.74e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   4 DLIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIF 83
Cdd:COG1005     7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2522682249  84 SLMISLFIWSIFPYTTYMC--SFSYGFLFFLCCTSLSVYTLM 123
Cdd:COG1005    87 AFIPALLAFAVIPFGPGLVlaDLNVGLLYVLAVSSLGVYGII 128
NADHdh pfam00146
NADH dehydrogenase;
13-123 3.49e-25

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 96.39  E-value: 3.49e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249  13 LFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFSLMISLFIW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2522682249  93 SIFPYTTYM--CSFSYGFLFFLCCTSLSVYTLM 123
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGIL 115
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 6-121 8.92e-25

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 95.62  E-value: 8.92e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   6 IMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFSL 85
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2522682249  86 MISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYT 121
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYT 118
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 5-123 3.84e-24

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 94.02  E-value: 3.84e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   5 LIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFS 84
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2522682249  85 LMISLFIWSIFPYTT--YMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVL 121
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
5-123 1.41e-22

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 89.87  E-value: 1.41e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   5 LIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFS 84
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2522682249  85 LMISLFIWSIFPYTTY--MCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVI 129
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 11-123 1.83e-21

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 86.11  E-value: 1.83e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249  11 NFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFSLMISLF 90
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2522682249  91 IWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTL 113
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 2-123 2.24e-20

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 84.30  E-value: 2.24e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   2 LYDLIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSP 81
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 2522682249  82 IFSLMISLFIWSIFPYT--TYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00029   83 IISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAIL 126
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 6-123 4.58e-11

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 58.01  E-value: 4.58e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   6 IMFVLNFLFLVICVLVsVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSPIFSL 85
Cdd:MTH00058    2 FGLVSGLEGLLIILLL-VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2522682249  86 MISLFIWSIFPYTTYMCSFSYGFLFFLCCTSLSVYTLM 123
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLL 118
ndhA CHL00032
NADH dehydrogenase subunit 1
 2-97 8.46e-09

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 51.88  E-value: 8.46e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2522682249   2 LYDLIMFVLNFLFLVICVLVSVAFLTLLERSVLGYIQIRSGPNKVGFLGVLQPFSDAIKLISKEQLIPLKSNYFLYYFSP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102

                          90
                  ....*....|....*.
gi 2522682249  82 IFSLMISLFIWSIFPY 97
Cdd:CHL00032  103 SIAVISILLSYLVIPF 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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