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Conserved domains on  [gi|2525147488|gb|WJL30556|]
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TKS [Vector pBbB2c-CBGA]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN03170 super family cl30450
chalcone synthase; Provisional
5-383 0e+00

chalcone synthase; Provisional


The actual alignment was detected with superfamily member PLN03170:

Pssm-ID: 178714 [Multi-domain]  Cd Length: 401  Bit Score: 563.57  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   5 RAEGPASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEMQTL 84
Cdd:PLN03170   16 RATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSL 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  85 DARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVL 164
Cdd:PLN03170   96 DARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 165 RIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEPDESVgERPIFELVSTGQTILPNS 244
Cdd:PLN03170  176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERV-ERPLFQLVSASQTILPDS 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 245 EGTIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAFTPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDSRHV 324
Cdd:PLN03170  255 EGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHV 334
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2525147488 325 LSEHGNMSSSTVLFVMDELRKRSLEEGKSTTGDGFEWGVLFGFGPGLTVERVVVRSVPI 383
Cdd:PLN03170  335 LSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393
 
Name Accession Description Interval E-value
PLN03170 PLN03170
chalcone synthase; Provisional
5-383 0e+00

chalcone synthase; Provisional


Pssm-ID: 178714 [Multi-domain]  Cd Length: 401  Bit Score: 563.57  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   5 RAEGPASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEMQTL 84
Cdd:PLN03170   16 RATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSL 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  85 DARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVL 164
Cdd:PLN03170   96 DARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 165 RIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEPDESVgERPIFELVSTGQTILPNS 244
Cdd:PLN03170  176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERV-ERPLFQLVSASQTILPDS 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 245 EGTIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAFTPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDSRHV 324
Cdd:PLN03170  255 EGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHV 334
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2525147488 325 LSEHGNMSSSTVLFVMDELRKRSLEEGKSTTGDGFEWGVLFGFGPGLTVERVVVRSVPI 383
Cdd:PLN03170  335 LSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393
CHS_like cd00831
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, ...
9-377 5.38e-148

Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.


Pssm-ID: 238427 [Multi-domain]  Cd Length: 361  Bit Score: 423.17  E-value: 5.38e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   9 PASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLN--EEHLKQNPrlveHEMQTLDA 86
Cdd:cd00831     1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPggEETYAPRP----EMSPSLDE 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  87 RQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVLRI 166
Cdd:cd00831    77 RNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 167 AKDIAENNKGARVLAVCCDIMACLFRGPseSDLELLVGQAIFGDGAAAVIVGAEPDESVGERPIFELVSTGQTILPNSEG 246
Cdd:cd00831   157 AKDLLEANPGARVLVVSTELCSLWYRGP--DHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSED 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 247 TIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAF--TPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDSRHV 324
Cdd:cd00831   235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLarLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMV 314
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2525147488 325 LSEHGNMSSSTVLFVMDELRKRSLEEGKsttgdgfEWGVLFGFGPGLTVERVV 377
Cdd:cd00831   315 LRRYGNMSSSSVLYVLAYMEAKGRVKRG-------DRGLLIAFGPGFTCESAV 360
Chal_sti_synt_N pfam00195
Chalcone and stilbene synthases, N-terminal domain; The C-terminal domain of Chalcone synthase ...
2-221 7.93e-119

Chalcone and stilbene synthases, N-terminal domain; The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.


Pssm-ID: 395142  Cd Length: 225  Bit Score: 343.76  E-value: 7.93e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   2 NHLRAEGPASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEM 81
Cdd:pfam00195   6 RAQRAEGKATLLAIGTATPEQCVPQETYVDYYFRDTKSEHMAELKEKFERLCDKSMIKKRYTHLTEEILDEHPELCTEMA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  82 QTLDARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGG 161
Cdd:pfam00195  86 PSLDARLEIANAEVPELGAEAALKAIKEWGQPKSKITHLVFCTTSGVRMPGADYQLAKLLGLRPSVKRVMLYFQGCYGGA 165
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 162 TVLRIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEP 221
Cdd:pfam00195 166 TVLRTAKDIAENNPGARVLVVCSEITVLGFRGPSKDRLDSLVGAALFGDGAAAVIIGADP 225
BH0617 COG3424
Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and ...
9-379 4.86e-90

Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442650 [Multi-domain]  Cd Length: 351  Bit Score: 275.10  E-value: 4.86e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   9 PASVLAIGTANPENILLQDEFPDYyFRVTKSEHMTQLkEKFRKICDKSMIRKRNCFLNEEHLKQNPrlvehemqTLDARQ 88
Cdd:COG3424     1 SARILSIATAVPPHRYTQEEIAEF-AAELFGLDERDR-RRLRRLFENSGIETRHSVLPLEWYLEPP--------SFGERN 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  89 DMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVLRIAK 168
Cdd:COG3424    71 ALYIEEALELAEEAARRALDKAGLDPEDIDHLVTVSCTGFAAPGLDARLINRLGLRPDVRRLPVGGMGCAAGAAGLRRAA 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 169 DIAENNKGARVLAVCCDIMACLFRgPSESDLELLVGQAIFGDGAAAVIVGAEPDESVGerpiFELVSTGQTILPNSEGTI 248
Cdd:COG3424   151 DFLRADPDAVVLVVCVELCSLTFQ-RDDDSKDNLVANALFGDGAAAVVVSGDPRPGPG----PRILAFRSYLIPDTEDVM 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 249 GGHIREAGLIFDLHKDVPMLISNNIEKcLIEAF---TPIGISDwnsI-FWITHPGGKAILDKVEEKLHLKSDKFVDSRHV 324
Cdd:COG3424   226 GWDVGDTGFRMVLSPEVPDLIAEHLAP-AVEPLlarHGLTIED---IdHWAVHPGGPKVLDAVEEALGLPPEALAHSREV 301
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2525147488 325 LSEHGNMSSSTVLFVMDELrkrsLEEGKSTTGdgfEWGVLFGFGPGLTVERVVVR 379
Cdd:COG3424   302 LREYGNMSSATVLFVLERL----LEEGAPAPG---ERGLAMAFGPGFTAELVLLR 349
 
Name Accession Description Interval E-value
PLN03170 PLN03170
chalcone synthase; Provisional
5-383 0e+00

chalcone synthase; Provisional


Pssm-ID: 178714 [Multi-domain]  Cd Length: 401  Bit Score: 563.57  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   5 RAEGPASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEMQTL 84
Cdd:PLN03170   16 RATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSL 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  85 DARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVL 164
Cdd:PLN03170   96 DARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 165 RIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEPDESVgERPIFELVSTGQTILPNS 244
Cdd:PLN03170  176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERV-ERPLFQLVSASQTILPDS 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 245 EGTIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAFTPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDSRHV 324
Cdd:PLN03170  255 EGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHV 334
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2525147488 325 LSEHGNMSSSTVLFVMDELRKRSLEEGKSTTGDGFEWGVLFGFGPGLTVERVVVRSVPI 383
Cdd:PLN03170  335 LSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393
PLN03172 PLN03172
chalcone synthase family protein; Provisional
5-383 0e+00

chalcone synthase family protein; Provisional


Pssm-ID: 178716  Cd Length: 393  Bit Score: 562.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   5 RAEGPASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEMQTL 84
Cdd:PLN03172   12 RAEGPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  85 DARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVL 164
Cdd:PLN03172   92 DARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVL 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 165 RIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEPDESVgERPIFELVSTGQTILPNS 244
Cdd:PLN03172  172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEIVSAAQTILPDS 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 245 EGTIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAFTPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDSRHV 324
Cdd:PLN03172  251 DGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATRHV 330
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2525147488 325 LSEHGNMSSSTVLFVMDELRKRSLEEGKSTTGDGFEWGVLFGFGPGLTVERVVVRSVPI 383
Cdd:PLN03172  331 LSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSVPA 389
PLN03173 PLN03173
chalcone synthase; Provisional
2-381 0e+00

chalcone synthase; Provisional


Pssm-ID: 178717 [Multi-domain]  Cd Length: 391  Bit Score: 548.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   2 NHLRAEGPASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEM 81
Cdd:PLN03173    9 KAQRAEGPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMA 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  82 QTLDARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGG 161
Cdd:PLN03173   89 PSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGG 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 162 TVLRIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEPDESVgERPIFELVSTGQTIL 241
Cdd:PLN03173  169 TVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGV-EKPLFELVSAAQTIL 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 242 PNSEGTIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAFTPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDS 321
Cdd:PLN03173  248 PDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLALKPEKLRAT 327
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 322 RHVLSEHGNMSSSTVLFVMDELRKRSLEEGKSTTGDGFEWGVLFGFGPGLTVERVVVRSV 381
Cdd:PLN03173  328 RHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHSV 387
PLN03168 PLN03168
chalcone synthase; Provisional
5-383 1.41e-170

chalcone synthase; Provisional


Pssm-ID: 178712 [Multi-domain]  Cd Length: 389  Bit Score: 481.46  E-value: 1.41e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   5 RAEGPASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEMQTL 84
Cdd:PLN03168   11 RAEGPACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSL 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  85 DARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVL 164
Cdd:PLN03168   91 NVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 165 RIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEPDESVgERPIFELVSTGQTILPNS 244
Cdd:PLN03168  171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEV-EKALFEVHWAGETILPES 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 245 EGTIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAFTPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDSRHV 324
Cdd:PLN03168  250 DGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDI 329
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2525147488 325 LSEHGNMSSSTVLFVMDELRKRSLEEGKSTTGDGFEWGVLFGFGPGLTVERVVVRSVPI 383
Cdd:PLN03168  330 LSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAAAN 388
PLN03171 PLN03171
chalcone synthase-like protein; Provisional
5-378 3.72e-150

chalcone synthase-like protein; Provisional


Pssm-ID: 178715 [Multi-domain]  Cd Length: 399  Bit Score: 430.19  E-value: 3.72e-150
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   5 RAEGPASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEMQTL 84
Cdd:PLN03171   18 RADGLAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  85 DARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVL 164
Cdd:PLN03171   98 DARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAAL 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 165 RIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEPDESvgERPIFELVSTGQTILPNS 244
Cdd:PLN03171  178 RLAKDLAENNRGARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAA--ERPLFEIVSAAQAIIPES 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 245 EGTIGGHIREAGLIFDL-HKDVPMLISNNIEKCLIEAFTP----IGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFV 319
Cdd:PLN03171  256 DDAINMHFTEGGLDGNIgTRQVPGLIGDNIERCLLDAFAPllggDGGAEWNDLFWAVHPGSSAILDQVDAALGLEPEKLA 335
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2525147488 320 DSRHVLSEHGNMSSSTVLFVMDELRKRsLEEGKStTGDGFEWGVLFGFGPGLTVERVVV 378
Cdd:PLN03171  336 ASRRVLSDYGNMFGATVIFALDELRRQ-MEEAAA-AGAWPELGVMMAFGPGLTVDAMLL 392
CHS_like cd00831
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, ...
9-377 5.38e-148

Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.


Pssm-ID: 238427 [Multi-domain]  Cd Length: 361  Bit Score: 423.17  E-value: 5.38e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   9 PASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLN--EEHLKQNPrlveHEMQTLDA 86
Cdd:cd00831     1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPggEETYAPRP----EMSPSLDE 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  87 RQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVLRI 166
Cdd:cd00831    77 RNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 167 AKDIAENNKGARVLAVCCDIMACLFRGPseSDLELLVGQAIFGDGAAAVIVGAEPDESVGERPIFELVSTGQTILPNSEG 246
Cdd:cd00831   157 AKDLLEANPGARVLVVSTELCSLWYRGP--DHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSED 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 247 TIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAF--TPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDSRHV 324
Cdd:cd00831   235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLarLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMV 314
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2525147488 325 LSEHGNMSSSTVLFVMDELRKRSLEEGKsttgdgfEWGVLFGFGPGLTVERVV 377
Cdd:cd00831   315 LRRYGNMSSSSVLYVLAYMEAKGRVKRG-------DRGLLIAFGPGFTCESAV 360
PLN03169 PLN03169
chalcone synthase family protein; Provisional
8-381 4.83e-119

chalcone synthase family protein; Provisional


Pssm-ID: 215612 [Multi-domain]  Cd Length: 391  Bit Score: 350.54  E-value: 4.83e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   8 GPASVLAIGTANPENILLQDEFPDYYFRVTKSEHmTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEMQTLDAR 87
Cdd:PLN03169   20 GKATILALGKAFPSQLVPQEYLVDGYFRDTKCDD-PALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQR 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  88 QDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVLRIA 167
Cdd:PLN03169   99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVA 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 168 KDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEPDEsVGERPIFELVSTGQTILPNSEGT 247
Cdd:PLN03169  179 KDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIP-VSESPFFELHTAIQQFLPGTEKT 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 248 IGGHIREAGLIFDLHKDVPMLISNNIE----KCLIEAftPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDSRH 323
Cdd:PLN03169  258 IDGRLTEEGINFKLGRELPQKIEDNIEgfckKLMKKA--GLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRR 335
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2525147488 324 VLSEHGNMSSSTVLFVMDELRkrslEEGKSTTGDGFEWGVLFGFGPGLTVERVVVRSV 381
Cdd:PLN03169  336 ALMDYGNVSSNTIVYVLEYMR----EELKKKGEEDEEWGLILAFGPGITFEGILARNL 389
Chal_sti_synt_N pfam00195
Chalcone and stilbene synthases, N-terminal domain; The C-terminal domain of Chalcone synthase ...
2-221 7.93e-119

Chalcone and stilbene synthases, N-terminal domain; The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.


Pssm-ID: 395142  Cd Length: 225  Bit Score: 343.76  E-value: 7.93e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   2 NHLRAEGPASVLAIGTANPENILLQDEFPDYYFRVTKSEHMTQLKEKFRKICDKSMIRKRNCFLNEEHLKQNPRLVEHEM 81
Cdd:pfam00195   6 RAQRAEGKATLLAIGTATPEQCVPQETYVDYYFRDTKSEHMAELKEKFERLCDKSMIKKRYTHLTEEILDEHPELCTEMA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  82 QTLDARQDMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGG 161
Cdd:pfam00195  86 PSLDARLEIANAEVPELGAEAALKAIKEWGQPKSKITHLVFCTTSGVRMPGADYQLAKLLGLRPSVKRVMLYFQGCYGGA 165
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 162 TVLRIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELLVGQAIFGDGAAAVIVGAEP 221
Cdd:pfam00195 166 TVLRTAKDIAENNPGARVLVVCSEITVLGFRGPSKDRLDSLVGAALFGDGAAAVIIGADP 225
BH0617 COG3424
Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and ...
9-379 4.86e-90

Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442650 [Multi-domain]  Cd Length: 351  Bit Score: 275.10  E-value: 4.86e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   9 PASVLAIGTANPENILLQDEFPDYyFRVTKSEHMTQLkEKFRKICDKSMIRKRNCFLNEEHLKQNPrlvehemqTLDARQ 88
Cdd:COG3424     1 SARILSIATAVPPHRYTQEEIAEF-AAELFGLDERDR-RRLRRLFENSGIETRHSVLPLEWYLEPP--------SFGERN 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  89 DMLVVEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCYGGGTVLRIAK 168
Cdd:COG3424    71 ALYIEEALELAEEAARRALDKAGLDPEDIDHLVTVSCTGFAAPGLDARLINRLGLRPDVRRLPVGGMGCAAGAAGLRRAA 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 169 DIAENNKGARVLAVCCDIMACLFRgPSESDLELLVGQAIFGDGAAAVIVGAEPDESVGerpiFELVSTGQTILPNSEGTI 248
Cdd:COG3424   151 DFLRADPDAVVLVVCVELCSLTFQ-RDDDSKDNLVANALFGDGAAAVVVSGDPRPGPG----PRILAFRSYLIPDTEDVM 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 249 GGHIREAGLIFDLHKDVPMLISNNIEKcLIEAF---TPIGISDwnsI-FWITHPGGKAILDKVEEKLHLKSDKFVDSRHV 324
Cdd:COG3424   226 GWDVGDTGFRMVLSPEVPDLIAEHLAP-AVEPLlarHGLTIED---IdHWAVHPGGPKVLDAVEEALGLPPEALAHSREV 301
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2525147488 325 LSEHGNMSSSTVLFVMDELrkrsLEEGKSTTGdgfEWGVLFGFGPGLTVERVVVR 379
Cdd:COG3424   302 LREYGNMSSATVLFVLERL----LEEGAPAPG---ERGLAMAFGPGFTAELVLLR 349
Chal_sti_synt_C pfam02797
Chalcone and stilbene synthases, C-terminal domain; This domain of chalcone synthase is ...
232-382 2.44e-75

Chalcone and stilbene synthases, C-terminal domain; This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain.


Pssm-ID: 397089  Cd Length: 151  Bit Score: 230.42  E-value: 2.44e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 232 ELVSTGQTILPNSEGTIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAFTPIGISDWNSIFWITHPGGKAILDKVEEKL 311
Cdd:pfam02797   1 ELVSAAQTFLPNTDGVIDGHLTEEGLTFHLGRDVPQKIEENIEEFLKKAFEPLGISEWNSLFWIVHPGGPAILDRVETKL 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2525147488 312 HLKSDKFVDSRHVLSEHGNMSSSTVLFVMDELRKRSLEEGKSTTGDGFEWGVLFGFGPGLTVERVVVRSVP 382
Cdd:pfam02797  81 GLEPEKLEASRRALMDYGNVSSATVLFILDEMRKKSLKKGLATTGEGLDWGVLLAFGPGLTFETVVLRSVP 151
cond_enzymes cd00327
Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) ...
95-378 4.71e-52

Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.


Pssm-ID: 238201 [Multi-domain]  Cd Length: 254  Bit Score: 174.17  E-value: 4.71e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  95 VPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTD-MPGADYHCAKLLGLsPSVKRVMMYQlGCYGGGTVLRIAKDIAEN 173
Cdd:cd00327     7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGeFSGAAGQLAYHLGI-SGGPAYSVNQ-ACATGLTALALAVQQVQN 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 174 NKGARVLAVCCDImaclfrgpsesdlellvgqAIFGDGAAAVIVGAEPDESV-GERPIFELVSTGQTILPNSEgtigghi 252
Cdd:cd00327    85 GKADIVLAGGSEE-------------------FVFGDGAAAAVVESEEHALRrGAHPQAEIVSTAATFDGASM------- 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 253 reaglifdlhkdVPMLISNNIEKCLIEAFTPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSD--KFVDSRHVLSEHGN 330
Cdd:cd00327   139 ------------VPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDgvRSPAVSATLIMTGH 206
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 2525147488 331 MSSSTVLFVMDELRKRSLEEGKSTTGDGFEWGVLFGFGPGLTVERVVV 378
Cdd:cd00327   207 PLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
decarbox_cond_enzymes cd00825
decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new ...
95-378 1.86e-47

decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).


Pssm-ID: 238421 [Multi-domain]  Cd Length: 332  Bit Score: 164.35  E-value: 1.86e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  95 VPKLGKDACAKAIKEWG----QPKSKITHLIFTSASTTD----------------------MPGADYHCAKLLGLSpsVK 148
Cdd:cd00825    11 VSILGFEAAERAIADAGlsreYQKNPIVGVVVGTGGGSPrfqvfgadamravgpyvvtkamFPGASGQIATPLGIH--GP 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 149 RVMMYQlGCYGGGTVLRIAKDIAENNKGARVLAVCCDIMACLFRGPSESDLELL------------VGQAIFGDGAAAVI 216
Cdd:cd00825    89 AYDVSA-ACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALStpekasrtfdaaADGFVFGDGAGALV 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 217 VGAEPDESV-GERPIFELVSTGQTILPNSEGTigghireaglifdlhkdvPMLISNNIEKCLIEAFTPIGISDWNSIFWI 295
Cdd:cd00825   168 VEELEHALArGAHIYAEIVGTAATIDGAGMGA------------------FAPSAEGLARAAKEALAVAGLTVWDIDYLV 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 296 THPGGKAILDKVEEKLHLKSD--KFVDSRHVLSEHGNMSSSTVLFVMDELRKRSLEEGKS------------------TT 355
Cdd:cd00825   230 AHGTGTPIGDVKELKLLRSEFgdKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPpsihieeldeaglnivteTT 309
                         330       340
                  ....*....|....*....|...
gi 2525147488 356 GDGFEWGVLFGFGPGLTVERVVV 378
Cdd:cd00825   310 PRELRTALLNGFGLGGTNATLVL 332
init_cond_enzymes cd00827
"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, ...
95-378 4.28e-30

"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.


Pssm-ID: 238423 [Multi-domain]  Cd Length: 324  Bit Score: 117.92  E-value: 4.28e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  95 VPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTD-MPGADYHCAKLLGLSPsVKRVMMYQlGCYGGGTVLRIAKDIAEN 173
Cdd:cd00827    48 VPTMAVEAARRALERAGIDPDDIGLLIVATESPIDkGKSAATYLAELLGLTN-AEAFDLKQ-ACYGGTAALQLAANLVES 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 174 NKGARVLAVCCDIMAclfRGPSESDlellVGQAIFGDGAAAVIVGAEPDesvgeRPIFELVSTGQTILPN----SEGTIG 249
Cdd:cd00827   126 GPWRYALVVASDIAS---YLLDEGS----ALEPTLGDGAAAMLVSRNPG-----ILAAGIVSTHSTSDPGydfsPYPVMD 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 250 GHIRE---AGLIFDLHKD-----VPMLISNNIEKCLIEAFTPIGISDWNSIFWITHPGGKAILDKVEEKLHLKSDKFVDS 321
Cdd:cd00827   194 GGYPKpckLAYAIRLTAEpagraVFEAAHKLIAKVVRKALDRAGLSEDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQT 273
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2525147488 322 RH-VLSEHGNMSSSTVLFVMDELrkrsLEEGKSTTGDGFewgVLFGFGPGLTVERVVV 378
Cdd:cd00827   274 RWiLLRRVGNMYAASILLGLASL----LESGKLKAGDRV---LLFSYGSGFTAEAFVL 324
KAS_III cd00830
Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty ...
98-372 1.15e-12

Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.


Pssm-ID: 238426 [Multi-domain]  Cd Length: 320  Bit Score: 67.95  E-value: 1.15e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  98 LGKDACAKAIKEWGQPKSKITHLIFTSASttdmpgADYHC-------AKLLGLspsvKRVMMY--QLGC----YGggtvL 164
Cdd:cd00830    53 LAVEAAKKALEDAGIDADDIDLIIVATST------PDYLFpataclvQARLGA----KNAAAFdiNAACsgflYG----L 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 165 RIAKDIAENNKGARVLAVCCDIMACL--FRGPSESdlellvgqAIFGDGAAAVIVGAEpDESVGERPiFELVSTGQTI-- 240
Cdd:cd00830   119 STAAGLIRSGGAKNVLVVGAETLSRIldWTDRSTA--------VLFGDGAGAVVLEAT-EEDPGILD-SVLGSDGSGAdl 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 241 ----LPNSEGTIGGHIREAGLIFDLHKDVPMLISNNIEKCLIEAFTPIGIS----DWnsiFWItHPGGKAILDKVEEKLH 312
Cdd:cd00830   189 ltipAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTpddiDW---FVP-HQANLRIIEAVAKRLG 264
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 313 LKSDKFVdsrHVLSEHGNMSSSTVLFVMDELRkrslEEGKSTTGDgfeWGVLFGFGPGLT 372
Cdd:cd00830   265 LPEEKVV---VNLDRYGNTSAASIPLALDEAI----EEGKLKKGD---LVLLLGFGAGLT 314
FabH COG0332
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
9-372 1.92e-11

3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440101 [Multi-domain]  Cd Length: 323  Bit Score: 64.36  E-value: 1.92e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488   9 PASVLAIGTANPENILLQDEFPDyyfRVTKSEhmtqlkEKFRKicdKSMIRKRncflneehlkqnpRLVEHEMQTLDarq 88
Cdd:COG0332     2 NVRILGTGSYLPERVVTNDDLEK---RLDTSD------EWIEE---RTGIRER-------------RIAAPDETTSD--- 53
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  89 dmlvvevpkLGKDACAKAIKEWGQPKSKITHLIFTSASttdmpgADYHC-------AKLLGLspsvKRVMMY--QLGCYG 159
Cdd:COG0332    54 ---------LAVEAARKALEAAGIDPEDIDLIIVATVT------PDYLFpstaclvQHKLGA----KNAAAFdiNAACSG 114
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 160 GGTVLRIAKDIAENNKGARVLAVCCDIMAclfRGPSESDLELLVgqaIFGDGAAAVIVGAEPDE---------SVGERPI 230
Cdd:COG0332   115 FVYALSVAAALIRSGQAKNVLVVGAETLS---RIVDWTDRSTCV---LFGDGAGAVVLEASEEGpgilgsvlgSDGSGAD 188
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 231 FELVSTGQTILPNSEGTIGGH-IREAGlifdlhKDVPMLISNNIEKCLIEAFTPIGISdWNSIFW-ITHPGGKAILDKVE 308
Cdd:COG0332   189 LLVVPAGGSRNPPSPVDEGDHyLRMDG------REVFKFAVRNLPEVIREALEKAGLT-LDDIDWfIPHQANLRIIEAVA 261
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2525147488 309 EKLHLKSDKFVDSrhvLSEHGNMSSSTVLFVMDELrkrsLEEGKSTTGDgfeWGVLFGFGPGLT 372
Cdd:COG0332   262 KRLGLPEEKVVVN---IDRYGNTSAASIPLALDEA----LREGRIKPGD---LVLLAGFGAGLT 315
ACP_syn_III_C pfam08541
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on ...
295-379 2.70e-09

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430060  Cd Length: 90  Bit Score: 53.66  E-value: 2.70e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 295 ITHPGGKAILDKVEEKLHLKSDKFVDSrhvLSEHGNMSSSTVLFVMDELrkrsLEEGKSTTGDGFewgVLFGFGPGLTVE 374
Cdd:pfam08541  15 VPHQANLRIIDAVAKRLGLPPEKVVVN---LDEYGNTSAASIPLALDEA----VEEGKLKPGDLV---LLVGFGAGLTWG 84

                  ....*
gi 2525147488 375 RVVVR 379
Cdd:pfam08541  85 AALLR 89
PRK09352 PRK09352
beta-ketoacyl-ACP synthase 3;
207-379 2.87e-09

beta-ketoacyl-ACP synthase 3;


Pssm-ID: 236475 [Multi-domain]  Cd Length: 319  Bit Score: 57.78  E-value: 2.87e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 207 IFGDGAAAVIVGAEPDESVGErpiFELVS--TGQTIL-----PNSEGTIGGHIREAGlifdlhKDVPMLISNNIEKCLIE 279
Cdd:PRK09352  157 LFGDGAGAVVLGASEEPGILS---THLGSdgSYGDLLylpggGSRGPASPGYLRMEG------REVFKFAVRELAKVARE 227
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 280 AFTPIGIS----DWnsiFwITHPGGKAILDKVEEKLHLKSDKFVDSrhvLSEHGNMSSSTVLFVMDELrkrsLEEGKSTT 355
Cdd:PRK09352  228 ALEAAGLTpediDW---L-VPHQANLRIIDATAKKLGLPMEKVVVT---VDKYGNTSAASIPLALDEA----VRDGRIKR 296
                         170       180
                  ....*....|....*....|....
gi 2525147488 356 GDGFewgVLFGFGPGLTVERVVVR 379
Cdd:PRK09352  297 GDLV---LLEGFGGGLTWGAALVR 317
PRK07204 PRK07204
beta-ketoacyl-ACP synthase III;
162-378 2.22e-07

beta-ketoacyl-ACP synthase III;


Pssm-ID: 235964  Cd Length: 329  Bit Score: 52.15  E-value: 2.22e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 162 TVLRIAKDIAENNKGARVLAVCCDIMAClfrGPSESDLELLVgqaIFGDGAAAVIVGAEPD---------ESVGERPIFE 232
Cdd:PRK07204  120 TALDTISYAIECGRYKRVLIISSEISSV---GLNWGQNESCI---LFGDGAAAVVITKGDHssrilashmETYSSGAHLS 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 233 LVSTGQTILPNSEGTIGghiREAGLIFDLH-KDVPMLISNNIEKCLIEAFTPIGISdWNSIFW-ITHPGGKAILDKVEEK 310
Cdd:PRK07204  194 EIRGGGTMIHPREYSEE---RKEDFLFDMNgRAIFKLSSKYLMKFIDKLLMDAGYT-LADIDLiVPHQASGPAMRLIRKK 269
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2525147488 311 LHLKSDKFVDsrhVLSEHGNMSSSTVLFVMDEL-RKRSLEEGKSTtgdgfewgVLFGFGPGLTVERVVV 378
Cdd:PRK07204  270 LGVDEERFVT---IFEDHGNMIAASIPVALFEAiKQKKVQRGNKI--------LLLGTSAGLSIGGILL 327
PRK12879 PRK12879
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
207-379 3.93e-07

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 237245 [Multi-domain]  Cd Length: 325  Bit Score: 51.40  E-value: 3.93e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 207 IFGDGAAAVIVGAEPDE---------SVGERPIFELVSTGQTILPNSEGTIGGHIREAGL-IFdlhKDVPMLISNNIEKC 276
Cdd:PRK12879  158 LFGDGAGAVVLEATENEpgfidyvlgTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGReVF---KWAVRTMPKGARQV 234
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 277 LIEAftpiGIS----DWnsifWITHPGGKAILDKVEEKLHLKSDKFVDSrhvLSEHGNMSSSTVLFVMDELrkrsLEEGK 352
Cdd:PRK12879  235 LEKA----GLTkddiDW----VIPHQANLRIIESLCEKLGIPMEKTLVS---VEYYGNTSAATIPLALDLA----LEQGK 299
                         170       180
                  ....*....|....*....|....*..
gi 2525147488 353 STTGDGFewgVLFGFGPGLTVERVVVR 379
Cdd:PRK12879  300 IKPGDTL---LLYGFGAGLTWAALLVK 323
PLN02932 PLN02932
3-ketoacyl-CoA synthase
81-368 8.76e-07

3-ketoacyl-CoA synthase


Pssm-ID: 178520  Cd Length: 478  Bit Score: 50.80  E-value: 8.76e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  81 MQTLDARQDMLV--VEVPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVKRVMMYQLGCY 158
Cdd:PLN02932  132 LQCLPLQQNLAVsrKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCS 211
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 159 GGGTVLRIAKDIAENNKGARVLAVCCD-IMACLFRGPSESdleLLVGQAIFGDGAAAVIVGAEPDESvgERPIFELVSTG 237
Cdd:PLN02932  212 AGVIAIDAAKSLLQVHRNTYALVVSTEnITQNLYLGNNKS---MLVTNCLFRIGGAAILLSNRSRDR--KRAKYELVHTV 286
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 238 QTILPNSEGTIGGHIREA---GLI-FDLHKDVPMLISNNIeKCLIEAFTPI--------------------------GIS 287
Cdd:PLN02932  287 RVHTGADDRSYECATQEEdedGIVgVSLSKNLPMVAARTL-KINIATLGPLvlplsekfhffvrfvkkkffnpklkhYIP 365
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 288 DWNSIF--WITHPGGKAILDKVEEKLHLKSDKFVDSRHVLSEHGNMSSSTVLFVMDELRKRsleeGKSTTGDGFeWGVLF 365
Cdd:PLN02932  366 DFKLAFehFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAK----GRMKKGDRI-WQIAL 440

                  ...
gi 2525147488 366 GFG 368
Cdd:PLN02932  441 GSG 443
fabH CHL00203
3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
95-379 1.97e-06

3-oxoacyl-acyl-carrier-protein synthase 3; Provisional


Pssm-ID: 164577 [Multi-domain]  Cd Length: 326  Bit Score: 49.17  E-value: 1.97e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488  95 VPKLGKDACAKAIKEWGQPKSKITHLIFTSASTTDMPGADYHCAKLLGLSPSVkrVMMYQLGCYGGGTVLRIAKDIAENN 174
Cdd:CHL00203   51 LTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAV--AFDITAACSGFILALVTATQFIQNG 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 175 KGARVLAVCCDIMACLFRGPSESDLELlvgqaiFGDGAAAVIVGAEPDESV-GerpiFELVSTGQ-------TILPNSEG 246
Cdd:CHL00203  129 SYKNILVVGADTLSKWIDWSDRKTCIL------FGDGAGAAIIGASYENSIlG----FKLCTDGKlnshlqlMNKPVNNQ 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 247 TIGG---------HIREAGLifDLHKDVPMLISNNIEKCLIEAFTPIGISDWnsifWITHPGGKAILDKVEEKLHLKSDK 317
Cdd:CHL00203  199 SFGTtklpqgqyqSISMNGK--EVYKFAVFQVPAVIIKCLNALNISIDEVDW----FILHQANKRILEAIANRLSVPNSK 272
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2525147488 318 FVDSrhvLSEHGNMSSSTVLFVMDElrkrSLEEGKSTTGDGFewgVLFGFGPGLTVERVVVR 379
Cdd:CHL00203  273 MITN---LEKYGNTSAASIPLALDE----AIQNNKIQPGQII---VLSGFGAGLTWGAIVLK 324
ACP_syn_III pfam08545
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl- ...
154-226 4.03e-05

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430064 [Multi-domain]  Cd Length: 80  Bit Score: 41.73  E-value: 4.03e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2525147488 154 QLGCYGGGTVLRIAKDIAENNKGARVLAVCCDIMAclfRGPSESDLELLVgqaIFGDGAAAVIVGAEPDESVG 226
Cdd:pfam08545   4 NAACSGFVYALSTAAALIRSGRAKNVLVIGAETLS---KILDWTDRSTAV---LFGDGAGAVVLEATDEPGAR 70
PLN02854 PLN02854
3-ketoacyl-CoA synthase
155-368 1.12e-04

3-ketoacyl-CoA synthase


Pssm-ID: 215459  Cd Length: 521  Bit Score: 44.18  E-value: 1.12e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 155 LGCYGGGTVLRIAKDIAENNKGARVLAVCCD-IMACLFRGpseSDLELLVGQAIFGDGAAAVIVGAEPDESVgeRPIFEL 233
Cdd:PLN02854  248 MGCSAGLISIDLANDLLKANPNSYAVVVSTEnITLNWYFG---NDRSMLLCNCIFRMGGAAVLLSNKARDRK--RSKYQL 322
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 234 VSTGQT-------------ILPNSEGTIGGHI-RE----AG------------LIFDLHKDVPMLISNNIEKCLIEAFTP 283
Cdd:PLN02854  323 VHTVRThkgaddknyncvyQREDDKGTIGVSLaRElmavAGdalktnittlgpLVLPLSEQFMFFVTLVRRKLLKAKVKP 402
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 284 IgISDWNSIF--WITHPGGKAILDKVEEKLHLKSDKFVDSRHVLSEHGNMSSSTVLFVMDELRKRsleeGKSTTGDGFeW 361
Cdd:PLN02854  403 Y-IPDFKLAFehFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAK----GRVSAGDRV-W 476

                  ....*..
gi 2525147488 362 GVLFGFG 368
Cdd:PLN02854  477 QIAFGSG 483
PLN02192 PLN02192
3-ketoacyl-CoA synthase
297-368 2.89e-04

3-ketoacyl-CoA synthase


Pssm-ID: 215123  Cd Length: 511  Bit Score: 42.65  E-value: 2.89e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2525147488 297 HPGGKAILDKVEEKLHLKSDKFVDSRHVLSEHGNMSSSTVLFvmdELrKRSLEEGKSTTGDGfEWGVLFGFG 368
Cdd:PLN02192  405 HAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWY---EL-AYSEAKGRIKKGDR-TWQIAFGSG 471
PRK05963 PRK05963
beta-ketoacyl-ACP synthase III;
206-336 7.15e-04

beta-ketoacyl-ACP synthase III;


Pssm-ID: 180328 [Multi-domain]  Cd Length: 326  Bit Score: 41.24  E-value: 7.15e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 206 AIFGDGAAAVIVGAEPDESVGERPI--------FELVS--TGQTILPNSEGTIGGH----IREAGLIFdlHKDVPMLiSN 271
Cdd:PRK05963  155 VLFADAAGAVVLAPSAKANSGVLGSqlisdgshYDLIKipAGGSARPFAPERDASEflmtMQDGRAVF--TEAVRMM-SG 231
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2525147488 272 NIEKCLIEA-FTPIGISDwnsifWITHPGGKAILDKVEEKLHLKSDKFVDSrhvLSEHGNMSSSTV 336
Cdd:PRK05963  232 ASQNVLASAaMTPQDIDR-----FFPHQANARIVDKVCETIGIPRAKAAST---LETYGNSSAATI 289
PLN02377 PLN02377
3-ketoacyl-CoA synthase
155-368 8.16e-04

3-ketoacyl-CoA synthase


Pssm-ID: 166018  Cd Length: 502  Bit Score: 41.54  E-value: 8.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 155 LGCYGGGTVLRIAKDIAENNKGARVLAVCCD-IMACLFRGPSESdleLLVGQAIFGDGAAAVIVGAEP-DESVGERPIFE 232
Cdd:PLN02377  232 MGCSAGVIAVDLAKDMLQVHRNTYAVVVSTEnITQNWYFGNKKS---MLIPNCLFRVGGSAVLLSNKSrDKRRSKYKLVH 308
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 233 LVST-------------------GQT-------ILPNSEGTIGGHIREAG-LIFDLHKDVPMLISNNIEKCLIEAFTPIg 285
Cdd:PLN02377  309 VVRThrgaddkafrcvyqeqddaGKTgvslskdLMAIAGEALKTNITTLGpLVLPISEQLLFFATLVVKKLFNKKMKPY- 387
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2525147488 286 ISDWNSIF--WITHPGGKAILDKVEEKLHLKSDKFVDSRHVLSEHGNMSSSTVLFVMDELR-KRSLEEGKSTtgdgfeWG 362
Cdd:PLN02377  388 IPDFKLAFdhFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEaKGRMRKGNRV------WQ 461

                  ....*.
gi 2525147488 363 VLFGFG 368
Cdd:PLN02377  462 IAFGSG 467
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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