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Conserved domains on  [gi|2571031227|gb|WML69189|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Amazona leucocephala]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009570)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-326 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214422  Cd Length: 323  Bit Score: 581.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   7 PLSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLA 86
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  87 FLLALTIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAG 166
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 167 NYTMTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLT 246
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 247 ALLFLNPSTLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00111  244 TILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-326 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 581.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   7 PLSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLA 86
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  87 FLLALTIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAG 166
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 167 NYTMTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLT 246
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 247 ALLFLNPSTLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00111  244 TILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
NADHdh pfam00146
NADH dehydrogenase;
13-306 3.70e-112

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 327.51  E-value: 3.70e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  13 TALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALT 92
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  93 IWTPLPL--PFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGNYTM 170
Cdd:pfam00146  81 AFAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 171 TTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLF 250
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2571031227 251 LNpSTLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:pfam00146 241 LG-GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-306 2.86e-103

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 305.90  E-value: 2.86e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   1 MVWPNIP-LSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLF 79
Cdd:COG1005     1 MSLLLAPlLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  80 ITTPMLAFLLALTIWTPLPL--PFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAII 157
Cdd:COG1005    81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 158 LLSMIMLAGNYTMTTLTISQE-PLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEY 236
Cdd:COG1005   161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2571031227 237 ANIMLMNTLTALLFL----NPSTLNPPSELFPLI-LATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:COG1005   241 ANMFLVSALATTLFLggwlGPFPILPLGGLPGILwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 7-326 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 581.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   7 PLSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLA 86
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  87 FLLALTIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAG 166
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 167 NYTMTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLT 246
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 247 ALLFLNPSTLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00111  244 TILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 8-326 5.62e-178

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 494.90  E-value: 5.62e-178
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   8 LSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAF 87
Cdd:MTH00134    6 ITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLAL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  88 LLALTIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGN 167
Cdd:MTH00134   86 TLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGG 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 168 YTMTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTA 247
Cdd:MTH00134  166 FTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSA 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2571031227 248 LLFLNPSTLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00134  246 ILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 5-324 1.06e-174

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 486.82  E-value: 1.06e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   5 NIPLSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPM 84
Cdd:MTH00071    2 MTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  85 LAFLLALTIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIML 164
Cdd:MTH00071   82 MALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 165 AGNYTMTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNT 244
Cdd:MTH00071  162 TGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNT 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 245 LTALLFLNPSTLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPP 324
Cdd:MTH00071  242 LSTILFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPP 321
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 12-326 2.10e-173

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 483.36  E-value: 2.10e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  12 ITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00104    4 INILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLAL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  92 TIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGNYTMT 171
Cdd:MTH00104   84 TMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLS 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 172 TLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00104  164 TLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFL 243

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2571031227 252 NPSTLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPYL 326
Cdd:MTH00104  244 GAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 8-324 1.76e-144

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 409.69  E-value: 1.76e-144
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   8 LSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAF 87
Cdd:MTH00218    2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  88 LLALTIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGN 167
Cdd:MTH00218   82 TLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGG 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 168 YTMTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTA 247
Cdd:MTH00218  162 FSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSV 241

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2571031227 248 LLFLNPSTLnppselfPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPP 324
Cdd:MTH00218  242 ILFLGTSLT-------TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 5-326 1.37e-138

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 395.11  E-value: 1.37e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   5 NIPLSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPM 84
Cdd:MTH00040    1 MSVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  85 LAFLLALTIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIML 164
Cdd:MTH00040   81 LFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 165 AGNYTMTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNT 244
Cdd:MTH00040  161 SGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 245 LTALLFLNPStlNPPSELFPL---ILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAG 321
Cdd:MTH00040  241 LSVILFLGGG--SPFNEIFPIniiIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNI 318


                  ....*
gi 2571031227 322 LPPYL 326
Cdd:MTH00040  319 LPPNY 323
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 12-321 3.93e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 335.17  E-value: 3.93e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  12 ITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00195    6 IHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALAL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  92 TIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGNYTMT 171
Cdd:MTH00195   86 ILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFT 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 172 TLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00195  166 IMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFL 245

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 252 NPSTLnppselfpLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAG 321
Cdd:MTH00195  246 GGGGT--------IIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
NADHdh pfam00146
NADH dehydrogenase;
13-306 3.70e-112

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 327.51  E-value: 3.70e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  13 TALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALT 92
Cdd:pfam00146   1 KILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  93 IWTPLPL--PFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGNYTM 170
Cdd:pfam00146  81 AFAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 171 TTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLF 250
Cdd:pfam00146 161 SEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2571031227 251 LNpSTLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:pfam00146 241 LG-GWLGPFPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSL 295
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 21-308 2.46e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 322.98  E-value: 2.46e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  21 ILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALTIWTPLPLP 100
Cdd:MTH00143   14 VLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 101 FPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGNYTMTTLTISQEPL 180
Cdd:MTH00143   94 FSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSV 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 181 YLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLFLnpSTLNPPS 260
Cdd:MTH00143  174 WLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFF--GGSSVLF 251

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 2571031227 261 ELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSL 308
Cdd:MTH00143  252 LLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSI 299
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 19-317 3.98e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 322.49  E-value: 3.98e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  19 VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALTIWTPLP 98
Cdd:MTH00193   13 ICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYP 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  99 LPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGNYTMTTLTISQE 178
Cdd:MTH00193   93 YLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQK 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 179 PLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLFLNpstlnp 258
Cdd:MTH00193  173 YIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLG------ 246

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2571031227 259 pSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPI 317
Cdd:MTH00193  247 -GDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-306 2.86e-103

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 305.90  E-value: 2.86e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   1 MVWPNIP-LSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLF 79
Cdd:COG1005     1 MSLLLAPlLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  80 ITTPMLAFLLALTIWTPLPL--PFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAII 157
Cdd:COG1005    81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 158 LLSMIMLAGNYTMTTLTISQE-PLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEY 236
Cdd:COG1005   161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2571031227 237 ANIMLMNTLTALLFL----NPSTLNPPSELFPLI-LATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:COG1005   241 ANMFLVSALATTLFLggwlGPFPILPLGGLPGILwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 12-314 3.50e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 302.34  E-value: 3.50e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  12 ITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00225    5 LKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  92 TIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGNYTMT 171
Cdd:MTH00225   85 ILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 172 TLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLFL 251
Cdd:MTH00225  165 DFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFF 244

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2571031227 252 NPStlnppSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTS 314
Cdd:MTH00225  245 GGF-----FVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLI 302
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 12-325 1.76e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 301.26  E-value: 1.76e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  12 ITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLAL 91
Cdd:MTH00054    6 IKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAF 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  92 TIWTPLPL--PFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGNYT 169
Cdd:MTH00054   86 IAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLN 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 170 MTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALL 249
Cdd:MTH00054  166 LTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVIL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 250 FL----NPSTLNPPSELFpLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGLPPY 325
Cdd:MTH00054  246 FLggwlVISGPTSYFSNF-VWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPPF 324
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 8-324 2.16e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 300.88  E-value: 2.16e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   8 LSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAF 87
Cdd:MTH00216    6 IFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSF 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  88 LLALTIWTPLPLPFPLV--DLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLA 165
Cdd:MTH00216   86 TLALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCV 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 166 GNYTMTTLTISQEP-LYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNT 244
Cdd:MTH00216  166 GSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSC 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 245 LTALLFLNpSTLNPPSELF--PLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLHLWHTSMPISYAGL 322
Cdd:MTH00216  246 LTTILFLG-GWLSPIKYFKggAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGP 324


                  ..
gi 2571031227 323 PP 324
Cdd:MTH00216  325 PP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-306 6.96e-97

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 289.40  E-value: 6.96e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   1 MVWPNIPLSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFI 80
Cdd:PRK06076    3 LFGPDLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  81 TTPMLAFLLALTIWTPLPL--PFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIIL 158
Cdd:PRK06076   83 LAPVIAFIPAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSL 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 159 LSMIMLAGNYTMTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYAN 238
Cdd:PRK06076  163 LAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYIN 242

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2571031227 239 IMLMNTLTALLFL---NPSTLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:PRK06076  243 MILVSALITTLFLggwLPPFPLGGGIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 8-324 2.88e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 258.02  E-value: 2.88e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   8 LSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAF 87
Cdd:MTH00029    7 ITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISF 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  88 LLALTIWTPLPLP--FPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLA 165
Cdd:MTH00029   87 TLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCV 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 166 GNYTMTTLTISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTL 245
Cdd:MTH00029  167 GSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCM 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 246 TALLFLN------------PSTLNPPSELFPLILA----TKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSLH 309
Cdd:MTH00029  247 MTIFFLGgwlspldgiptpPEAFSIFEQIASSKSSfwffTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLV 326

                         330
                  ....*....|....*
gi 2571031227 310 LWHTSMPISYAGLPP 324
Cdd:MTH00029  327 ILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 6-308 3.60e-84

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 256.63  E-value: 3.60e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227   6 IPLSYPITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPML 85
Cdd:MTH00010    1 MNISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  86 AFLLALTIWTPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLA 165
Cdd:MTH00010   81 SLILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 166 GNYTMTTLTISQEPLYLVFSSwPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTL 245
Cdd:MTH00010  161 QTFSFSKIIMSQYSWILLMII-PLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLF 239

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2571031227 246 TALLFLNPStlnPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSL 308
Cdd:MTH00010  240 TSVFFTSFI---PSIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTS 299
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 21-306 1.18e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 205.52  E-value: 1.18e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  21 ILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALTIWTPLPLP 100
Cdd:MTH00090    9 ILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 101 FPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMlagNYTMTTLtISQEPL 180
Cdd:MTH00090   89 FDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIML---HNNSFSF-VSSFSL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 181 YLVFsswpLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLFLNPSTLNpps 260
Cdd:MTH00090  165 SLFV----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKFSFLM--- 237

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 2571031227 261 elfplilatkTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:MTH00090  238 ----------LFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 21-306 2.20e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 161.25  E-value: 2.20e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  21 ILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLAFLLALTIWTPLPLP 100
Cdd:MTH00058   14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 101 FPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGNYTMTTLTISQEPL 180
Cdd:MTH00058   94 YSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLS 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 181 YLVFssWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLFLNPStlnpps 260
Cdd:MTH00058  174 VLLF--PLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGG------ 245

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 2571031227 261 elFPLILATKTLLLsssFLWIRASYPRFRYDQLMHLLWKNFLPLTL 306
Cdd:MTH00058  246 --FVSIMLLFHLLF---FMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 11-306 9.85e-46

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 158.96  E-value: 9.85e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  11 PITALTY*VPILIAVAFLTLTERKILSYMQSRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPLLFITTPMLA---- 86
Cdd:CHL00032   30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAvisi 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  87 FLLALTIwtPLPLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAG 166
Cdd:CHL00032  110 LLSYLVI--PFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSN 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 167 nyTMTTLTISQEPLYLVFSSWPL------AMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIM 240
Cdd:CHL00032  188 --SLSTVDIVEAQSKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLL 265

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 241 LMNTLTALLFLNPSTLNPPSELFPLILATK--------------TLLLSSSFLWI----RASYPRFRYDQLMHLLWKNFL 302
Cdd:CHL00032  266 VSSLFVTVLYLGGWNLSIPYIFIPELFEINktggvfgttigifiTLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLL 345


                  ....
gi 2571031227 303 PLTL 306
Cdd:CHL00032  346 PISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
21-308 1.13e-31

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 120.29  E-value: 1.13e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  21 ILIAVA-FLTLTERKILSYMQSRKGPnivgpfGLLQPIADGVKLFIKEPIRPSTSSPLlFITTPMLAF--LLALTIWTPL 97
Cdd:COG0650    13 LALLLApLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVALaaMLLAALLVPV 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227  98 PLPFPLVDLNLGLLFLLAMSSLAVYSILWSGWASNSKYALIGALRAVSQTISYEVTLAIILLSMIMLAGN---YTMTTLT 174
Cdd:COG0650    86 LTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGStslSDIVAYQ 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2571031227 175 ISQEPLYLVFSSWPLAMMWYISTLAETNRSPFDLTEGESELVSGFNVEYSAGPFVLFFLAEYANIMLMNTLTALLFLnPS 254
Cdd:COG0650   166 AAHGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFL-PW 244

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2571031227 255 TLNPPSELFPLILATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLSL 308
Cdd:COG0650   245 GIALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLAL 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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