|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
8.40e-170 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 476.24 E-value: 8.40e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 1 MNPQAKLVSSISLLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWH 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 81 TGQWDITQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTMAIA 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 241 TAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQVNKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 2587643732 321 VDTPTTILTTLSIMLLPLSPMILTTL 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.30e-137 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 393.02 E-value: 5.30e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 1 MNPQAKLVSSISLLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWH 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 81 TGQWDITQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSlNPTLLSTMAIA 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 241 TAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQVNKS 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 2587643732 321 VDT-PTTILTTLSIMLLPLSPMILTTL 346
Cdd:MTH00135 320 QLTlPLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
6.10e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 387.74 E-value: 6.10e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 1 MNPQAKLVSSISLLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWH 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 81 TGQWDITQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTMAIA 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 241 TAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQVNKS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 2587643732 321 VDTPTTILTTLSIMLLPLSPMILTTL 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
5.18e-123 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 357.62 E-value: 5.18e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 1 MNPQAKLVSSISLLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWH 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 81 TGQWDITQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTMAIA 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 241 TAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYCATITLPPnSTNHMK-QWQVNK 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQFEN 319
|
330 340
....*....|....*....|....*.
gi 2587643732 320 SVDTPTT-ILTTLSIMLLPLSPMILT 344
Cdd:MTH00105 320 TKPMTLLpTLIILSTMLLPLTPMLSI 345
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.32e-97 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 291.49 E-value: 4.32e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 1 MNPQAKLVSSISLLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWH 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 81 TGQWDITQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTMAIA 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 241 TAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQVNKS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 2587643732 321 VDTPTTILTTLSIMLLPLSPMILTTL 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
11-336 |
4.50e-85 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 261.02 E-value: 4.50e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 11 ISLLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLT 90
Cdd:MTH00041 11 TSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 91 HPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTMAIASTALGGWMGL 170
Cdd:MTH00041 91 NTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 171 NQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSLTAALMVMLLS 250
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 251 LAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYCATITLPPNSTNHMKQWQVNKSVDTPTTILTT 330
Cdd:MTH00041 251 LGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGVILSI 330
|
....*.
gi 2587643732 331 LSIMLL 336
Cdd:MTH00041 331 LSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
2.56e-64 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 206.98 E-value: 2.56e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 1 MNPQAKLVSSISLLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWh 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 81 tgqwdITQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPttlLFLTSPSLNPTLLSTMAIA 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAP---LILLSYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 161 STALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 241 TAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYCAtITLPPNSTNHMKQWQVNKS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|...
gi 2587643732 321 VdTPTTILTTLSIMLLPLSPMIL 343
Cdd:MTH00160 312 S-LILNFLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-321 |
1.09e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 184.70 E-value: 1.09e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 13 LLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITqlthp 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 93 tacMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPttLLFLTSPSLNPTLLST---MAIASTALGGWMG 169
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP--LFLLSNFLDLYWLAYLlcvISVLSALVGSIGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 170 LNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLStMMTSWTKIPSLTAALMVMLL 249
Cdd:MTH00144 163 LNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMK-DLGSLKPSYKTGLSIISLLL 241
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2587643732 250 SLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYCATITLpPNSTNHMKQWQVNKSV 321
Cdd:MTH00144 242 SLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSS-SKSKKSNSSKVLNSSI 312
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-310 |
8.56e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 166.88 E-value: 8.56e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 7 LVSSISLLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSainawhTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 87 TQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTMAIASTALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 167 WMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSLTAALMV 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2587643732 247 MLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYcATITLPPNSTN 310
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
10-298 |
4.22e-45 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 156.76 E-value: 4.22e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 10 SISLLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTgqwditqL 89
Cdd:MTH00197 4 LFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL-------Y 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 90 THPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPttLLFLTSPSLNPTLLSTMAIASTALGGWMG 169
Cdd:MTH00197 77 LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 170 LNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSLTAALMVMLL 249
Cdd:MTH00197 155 MNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFL 234
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2587643732 250 SLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAY 298
Cdd:MTH00197 235 SLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
1.45e-39 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 145.64 E-value: 1.45e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 14 LMGTIITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTHP 92
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 93 ------------TACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKL----PPTTLLFLTSPSLNP---TL 153
Cdd:COG1007 192 laaggansplllLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqLL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 154 LSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTI-ILTHNPK-LTLITFYL--YSLTTAAVFSVLNT-TNTLKLS 228
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLlSRKGGEA 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2587643732 229 TMMTSW----TKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAY 298
Cdd:COG1007 352 EEIEDLaglaRRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
2.06e-35 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 134.18 E-value: 2.06e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 14 LMGTIITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 93 TA------------CMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKL----PPTTLLFLTSPSLNPT---L 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 154 LSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTL--ITFYL--YSLTTAAVFSVLNT-TNTLKLS 228
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVISLlRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2587643732 229 TMMTSWTKI----PSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRL 296
Cdd:PRK05777 353 ESISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.22e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 122.06 E-value: 1.22e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 13 LLMGTIITISSNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLLLFSSA-------------INA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGCAllcgttgglhlsyINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 79 WHTGQWDITQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTma 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGG-- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 159 IASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNP----KLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTS- 233
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKNLIIEFSg 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2587643732 234 -WTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRL 296
Cdd:MTH00196 240 lSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.42e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 112.02 E-value: 1.42e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 23 SNHWMMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTHPTACM----- 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGlnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 97 ------LLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPT------LLSTMAIASTAL 164
Cdd:pfam00361 81 llllflLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 165 GGWMGLNQTQIRKILAFSSISHLGWMTIIL----THNPKLTLITFYLYSLTTAAVFS-----VLNTTNTLKLSTMMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 2587643732 236 KIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
2.86e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 114.27 E-value: 2.86e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 14 LMGTIITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 93 ------------TACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSL-------NPTL 153
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgfseaWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 154 LSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILT----HNPKLTLITFYLYSLTTAAVFSVL------NTTN 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLagtlEGIKAVLFYIFIYALMSLGAFGVLsllrsyKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2587643732 224 TLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
3.43e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 111.26 E-value: 3.43e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 13 LLMGTIITISSNHWMMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 88 QLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLStmAIASTALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 168 MGLNQTQIRKILAFSSISHLGW----MTIILTHNPKLTLITFYLYSLTTAAVFSV---LNTTNTLKLSTMMTSwTKIPSL 240
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIilsLKLTKGLIVEVSGLS-RKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2587643732 241 TAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRL 296
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
5.79e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 110.24 E-value: 5.79e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 13 LLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTH- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 92 ---------PTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVM-KLPP------TTLLFLTSPSLNP-TLL 154
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailrvLTLLFGADPALFLgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 155 STMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTI-ILTHNPKLTLITFYLY---SLTTAAVF----SVLNTTNTLK 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLgLGLGTPLGLAGALFHLlnhALAKALLFlaagAIERATGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 227 LSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRL 296
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-302 |
5.31e-21 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 94.16 E-value: 5.31e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 15 MGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAI---------EAATKYFLVQAAASTLLLFSSAINAWHTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 84 ------------WDITQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLppTTLLFLTSPSLNP 151
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 152 TLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSL----TTAAVFSVLNTTNTL-- 225
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVtylvSALASFTVICTLEEFgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 226 -------------------KLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLS 286
Cdd:MTH00198 437 rtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330 340
....*....|....*....|...
gi 2587643732 287 LLGL-------FFYLRLAycATI 302
Cdd:MTH00198 517 LFAIictcisaFYYIRIV--ATI 537
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
6.14e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 78.51 E-value: 6.14e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 51 RAIEAATKYFLVQAAASTLLL--FSS--AINAWHTGQWDI------TQLTHPTAC----MLLTIAISMKLGLVPFHFWFP 116
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWlyGLSGGEIELQEIvnglinTQMYNSPGIsialIFITVGIGFKLSLAPFHQWTP 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 117 EVLQG-----------VSLSTSLLLATVMklppTTLLFLTSPSLNPTLLSTMAIASTALGGWMGLNQTQIRKILAFSSIS 185
Cdd:CHL00049 239 DVYEGsptpvvaflsvTSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 186 HLGWMTI-ILTHNPK------LTLITFYLY----SLTTAAVFSVlnTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGL 254
Cdd:CHL00049 315 QIGYVIIgIIVGDSNdgyasmITYMLFYIFmnlgTFACIVLFGL--RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGI 392
|
....*....
gi 2587643732 255 PPLTGFLPK 263
Cdd:CHL00049 393 PPLAGFFGK 401
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-307 |
1.07e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 77.61 E-value: 1.07e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQL--------THPTACMLLTIAISM 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLagalaenpTVVTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 105 KLGLVPFHFWFPEVLQGVS-LSTSLLLATVMKLPPTTLL----------FLTSPSLNpTLLSTMAIASTALGGWMGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPpVVTALLSGLVTKVAVYALIriyftvfggdFRFALGLG-WLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 174 QIRKILAFSSISHLGWMTI---ILTHNpKLTLITFYL--YSLTTAAVF----SVLNTTNTLKLSTMMTSWTKIPSLTAAL 244
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLglaLLTPL-ALAAGLLHLlhHALMKGALFlaagAIEVTYGTRRLSELSGLGRRMPLTAAAF 372
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2587643732 245 MVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYCATITLPPN 307
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPP 435
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-298 |
1.59e-15 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 77.50 E-value: 1.59e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 48 HHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTH-----------PTACMLLTIAISMKLGLVPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAaaptilsspllTLILLLLLLGAFGKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 117 EVLQG---VSlstSLLLATVMKLPPTTLLFLTSP--SLNPTLLSTMAI--ASTAL-GGWMGLNQTQIRKILAFSSISHLG 188
Cdd:COG1009 236 DAMEGptpVS---ALLHAATMVKAGVYLLARLSPlfALSPVWLTVVAIigAITALfAALIALAQTDIKRVLAYSTVSQLG 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 189 WMTI-------------ILTHnpkltlitfylySLTTAAVF----SVLNTTNTLKLSTMMTSWTKIPSLTAALMVMLLSL 251
Cdd:COG1009 313 YMFLalgvgayvaalfhLLTH------------AFFKALLFlgagSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSL 380
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2587643732 252 AGLPPLTGFLPKWLIIQE-LTKQELTVIATMIALL-SLLGLFFYLRLAY 298
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRLFF 429
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-335 |
9.02e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 75.13 E-value: 9.02e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTH-----PT-----ACMLLTIA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVkmsenPTvvakiALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 102 ISMKLGLVPFHFWFPEVLQGV--SLSTSLLLATVMKLPPT--TLLFLTSPSLNPT----LLSTMAIASTALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAApsSISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 174 QIRKILAFSSISHLGWM------TIILTHNPKLTLITFY-----------------LYSLTTAAVFSVLNTTNTLKLSTM 230
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMASYGEIalaggiyhivnhalykaLLFLTAGAVIYETGTRNLNELGGL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 231 MtswTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQE--LTKQELTVIATMIALLSLLGlffYLRLAYcaTITLPPNS 308
Cdd:PRK08376 390 A---RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsaLFNPILGVIAMIGSVLTLAS---FVKVFH--TAFFGPPS 461
|
330 340
....*....|....*....|....*..
gi 2587643732 309 TNHMKQWQVNKSVDTPTTILTTLSIML 335
Cdd:PRK08376 462 EKVMNVKEPPKPMLVPMLILAIAIIGM 488
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-267 |
5.50e-14 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 72.42 E-value: 5.50e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 49 HPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQW--DITQLTH----PTACMLL----TIAISMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplpLTAQLLLflafFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 119 LQGVSLSTSLLLATVMK-----------LPpttLLFLTSPSLNPtLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHL 187
Cdd:COG1008 236 HVEAPTAGSVLLAGVLLkmggygllrfaLP---LFPEASAYFAP-LLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 188 GWMTI-ILTHNPK-LTLITFYLYS--LTTAAVFSVL----NTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTG 259
Cdd:COG1008 312 GFVLLgIFALNPLgLQGAVLQMVShgLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSG 391
|
....*...
gi 2587643732 260 FLPKWLII 267
Cdd:COG1008 392 FVGEFLVL 399
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-298 |
3.01e-13 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 70.41 E-value: 3.01e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 34 EINTLAILPLISKSHHpRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDIT-------QLTHPTACMLLTIAIS--- 103
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIVFLFLLafg 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 104 -MKLGLVPFHFWFPE-----------VLQGV-SLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTMAIA-----STALG 165
Cdd:PRK08668 207 vAKAGIFPLHVWAPDayseapqsfsaVLSGQlSKLGAYGFLLVLYVLPGTKLFSEFGTYRGVPLFNYILAwlgniSIIVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 166 GWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTlITFYLYSLTTAAVFS---------VLNTTNTLKLSTMMTSWTK 236
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLG-FAGGLFHVFNHALFKglfflifaaVIYRTGTTKISEMGGLIEK 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2587643732 237 IPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAY 298
Cdd:PRK08668 366 MPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
7.78e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 66.23 E-value: 7.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 50 PRAIEAATKYFLVQAAASTLLLFSSA----INAWHTGQWDITQLTHPTACMLLTIA-------ISMKLGLVPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSSllygLSGGSTQLSAIALALITSPSLGLALAlvfviagIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 119 LQGVSLSTSLLLATVMKLPPTTLL--FLTS--PSLNP---TLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMT 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALAirLLVTafPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 192 IILTHNPKLTLITFYLYSL----------TTAAVFSVlnTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFL 261
Cdd:PRK02504 317 IGLVAGTEAGYASMVFYLLaylfmnlgafACVILFSL--RTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFF 394
|
..
gi 2587643732 262 PK 263
Cdd:PRK02504 395 GK 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
9.94e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 65.73 E-value: 9.94e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 50 PRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQW----DITQLTHPTACMLLT-----IAISMKLGLVPFHFWFPEVLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVQTWLflaffIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 121 GVSLSTSLLLATVM-KLPPTTLLFLTSPsLNP-------TLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLlKMGTYGFLRFNLP-LFPdaslyfaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 193 ILTHNPKLTLI--TFYLYS--LTTAAVFSVLNT----TNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISgaVFQMIShgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
....
gi 2587643732 265 LIIQ 268
Cdd:TIGR01972 391 LILL 394
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-298 |
1.02e-11 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 65.74 E-value: 1.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 53 IEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQL-----------THPTACMLLTIAISMKLGLVPFhFWFPEVLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIamrlndmgdtaTLTTIALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 122 VSLSTSLLLATVMK-------LPPTTLLFLTSPSLNPTLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTI-I 193
Cdd:PRK12663 236 PNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 194 LTHNPK-LTLITFYLYS--LTTAAVF----SVLNTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK12663 316 ALGTPAgINGAIFYLVHdmVVKTALFliagSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|....*
gi 2587643732 267 IQ-ELTKQELTVIATMIA--LLSLLGLFFYLRLAY 298
Cdd:PRK12663 396 VQgALDNGAYILLALMLItsLITMYSLFRIFFLAY 430
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-292 |
2.43e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 61.48 E-value: 2.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 20 TISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLV------QAAASTLLLFSSAIN---------AW----- 79
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANAATvmgdgemaiLWtellk 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 80 HTGQWDITQLThpTACMLLTIAISMKLGLVPFHFWFPE-----------VLQGVSLSTSL---------LLATVMKLPPt 139
Cdd:PRK06458 204 HASLLDPTLMK--LAFVFLLIGFGTKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALyavlryyilIDAAIGSDFP- 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 140 tllfltspslnPTLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKL----TLITFYLYSLTTAAV 215
Cdd:PRK06458 281 -----------GRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifaALLHMLNHSLTKSAI 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 216 F----SVLNTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELtvIATMIALLSLLGLF 291
Cdd:PRK06458 350 FfasgNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGP--LLIAILLLLLLTLA 427
|
.
gi 2587643732 292 F 292
Cdd:PRK06458 428 F 428
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-263 |
1.08e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 59.94 E-value: 1.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 80 HTGQWDITQL-THPTACMLLTIAISM-------KLGLVPFHFWFPEVLQGVSLSTSLLLATVM---------KLPPTtll 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 143 FLTSPSLNPTLLsTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIIL---THNPKLTLITFYL-YSLTTAAVFSV 218
Cdd:PRK12644 260 FADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgigTRDAALAGLAMLLaHALFKAALFLV 338
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2587643732 219 L----NTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 339 VgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
1.72e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 59.29 E-value: 1.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 29 AWtglEINTLAILPLISKSHhPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTHPTA-----------CML 97
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglttvvAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 98 LTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSL--NPT---LLSTMAIASTALGGWMGLNQ 172
Cdd:PRK12650 214 IAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 173 TQIRKILAFSSISHLGWM--TIILTHNPKLT--LITFYLYSLTTAAVFS----VLNTTNTLKLSTMMTSWTKIPSLTAAL 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIvaTIGVGTPFALTaaVVHTLAHALFKSSLFMligvVDHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 245 MVMLLSLAGLPPLTGFLPKWLIIQELTKQELTViATMIALLSLLGLFFYLRLAYCATITL 304
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGN-AGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
2.98e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 58.21 E-value: 2.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQL-----------THPTACMLLTIA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlptnrAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 102 ISMKLGLVPFHFW----FPEVLQGVSL-----STSLLLATVMKLPPTTL---LFLTSPSLNPTLLsTMAIASTALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWliqaYSEAPSFISVffsgtSTKVMIYLIIRIVYDVFkanFVFTTLPFNNVFM-ILAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 170 LNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLY----SLTTAAVFSVLNTT----NTLKLSTMMTSWTKIPSLT 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLEDCLNLWKSMPKIT 377
|
250 260
....*....|....*....|....*.
gi 2587643732 242 AALMVMLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-286 |
1.47e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 56.08 E-value: 1.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 109 VPFHFWFPEVLQGVS-LSTSLLLATVMKLPpTTLLFLTSPSLNPT-----LLSTMAIASTALGGWMGLNQTQIRKILAFS 182
Cdd:PRK12647 212 FPFHFWLPNAMEAPTpVSAYLHSATMVKAG-IYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 183 SISHLGWMTIILTHNPKLTLITFYLY----SLTTAAVFSVLNT----TNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGL 254
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGL 370
|
170 180 190
....*....|....*....|....*....|...
gi 2587643732 255 PPLTGFLPKWLIIQELTKQEL-TVIATMIALLS 286
Cdd:PRK12647 371 PPLFGFLAKELIYEALLEAPLwSLILTVAAVLG 403
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
2.35e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 55.21 E-value: 2.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 50 PRAIEAATKYFLVQAAASTLLLFS----SAINAWHTGQWDITQLTH----PTACMLL----TIAISMKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAiiylVVVYYNATGTFDIADLLNlplpPGVQYWLflafFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 118 VLQGVSLSTSLLLATVM-----------KLPpttlLFLTSPSLNPTLLSTMAIASTALGGWMGLNQTQIRKILAFSSISH 186
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILlkmgaygllrfSLP----LFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 187 LGWMTI-ILTHNPK-LTLITFYLYS--LTTAAVFSVLNT----TNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLT 258
Cdd:PRK05846 313 MGFVTLgIFAGNQLgIQGAIFQMIShgLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
....*....
gi 2587643732 259 GFLPKWLII 267
Cdd:PRK05846 393 GFVGEFLIL 401
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
1.24e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 47.64 E-value: 1.24e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2587643732 291 FFYLRLAYCATITLPPNSTNHMKQWQVNKSVDT-PTTILTTLSIMLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-285 |
1.25e-07 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 53.05 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQL------THPTACMLLTIAISMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALsglhgsLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 107 GLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNP------TLLSTMAIASTALGGWMGLNQTQIRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 181 FSSISHLGWMTI-----ILTHNPKLTLITFYLY------SLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSLTAALMVMLL 249
Cdd:PRK06525 302 YSTITQLGYMFFglslaILGSRLALEGSIAYIFnhafakSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250 260 270
....*....|....*....|....*....|....*....
gi 2587643732 250 SLAGLPPLTGFLPKWLIIQ---ELTKQELTVIATMIALL 285
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIFAagfELSVEYWILLPAMVLLL 420
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
1.70e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 52.65 E-value: 1.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTH--PTACMLLTIAISMKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 111 FHFWFPEVLQGVSLSTSLLLATVM---KLPPTTLLFLTSPSLNPtLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHL 187
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVvkaGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQL 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 188 GWmtiILthnpkLTLITFYLYSLTTAAVFSVL--------NTTNTLKLSTMMTSWTKIPSLTAAlmvmlLSLAGLPPLTG 259
Cdd:PRK07234 282 GF---IL-----AAPLVGGLYALAHGLVKSTLflcagalpSRNFTELISQMLGIGKWIPLTMAS-----FSIAGFPLLAG 348
|
250
....*....|..
gi 2587643732 260 FLPKWLIIQELT 271
Cdd:PRK07234 349 FVSKVLTLKNLL 360
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-344 |
1.92e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 52.34 E-value: 1.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 34 EINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQ-----LTHPT------ACMLLTIAI 102
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTspviygGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 103 SMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTL------LFLTSPSLNP--TLLSTMAIASTALGGWMGLNQTQ 174
Cdd:PRK06277 210 LYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSaqGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 175 IRKILAFSSISHLGWMTIILTHNPKLTLITFYLYS----LTTAAVF----SVLNTTNTLKLSTMMTSWTKIPSLtaALMV 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFlgagIVSYRTKTSNLRKLGGLLPVMPVV--AFMV 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 247 ML--LSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRLAYcaTITLPPNSTN-HMKQWQVNKSVDT 323
Cdd:PRK06277 368 LCakLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY--LIYLKPKPEElEYKNKKVPKYAVF 445
|
330 340
....*....|....*....|.
gi 2587643732 324 PTTILTTLSImLLPLSPMILT 344
Cdd:PRK06277 446 SLAVLTILCI-ILGLFPDLVT 465
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-291 |
3.44e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 52.04 E-value: 3.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 59 YFLVQAAASTLLLFSSAINAW-HTGQWDITQLTHPTAC-----MLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLAT 132
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAGIlslvfLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 133 VM-KLPPTTLLFLTSPSLNP-----TLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLG--------WMTIILTHNP 198
Cdd:PRK08667 246 VMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 199 KLTLITF--YLYSLTTAAVF---------SVLNTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK08667 326 TLALLALggALFHSLNHALFksllfltagSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
250 260
....*....|....*....|....*.
gi 2587643732 268 QELTkQELTVIATM--IALLSLLGLF 291
Cdd:PRK08667 406 ESFF-QSFSVADPLikILLFSVLAIF 430
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-298 |
3.88e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 51.62 E-value: 3.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 95 CMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTMAIA-----STALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTivgslTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 170 LNQTQIRKILAFSSISHLGWMTIILThnpkltlITFY---LYSLTTAAVF---------SVLNTTNTLKLSTMMTSWTKI 237
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACG-------LSHYsisLFHLMNHAFFkallflsagSVIHALSDEQDMRKMGGLISF 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2587643732 238 PSLTAALMVM-LLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLS-LLGLFFYLRLAY 298
Cdd:MTH00020 366 LPLTYIFFLIgSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
7.48e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 50.98 E-value: 7.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 48 HHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTHPTACM--------------LLTIAISMKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 114 WFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPT-----LLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 189 WMTIIL----THNPKLTLI--TFYLYSLTT--AAVF----SVLNTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYgyttYHEPGLGVAaaTFHLLNHATfkACLFlvagIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 2587643732 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-296 |
2.04e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 49.18 E-value: 2.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 96 MLLTIAISMKLGLVPFHFWFPEVLQGV---------SLSTSLLLATVMKLppTTLLFLTSPSLNPTLLSTMAIASTALGG 166
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGSYYAPpiaiaalfgALLTKVGVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGV 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 167 WMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLI--TFYLYS---------LTTAAVFSVLNTTNTLKLSTMMTSWt 235
Cdd:PRK07691 291 IGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIgaIYYLIHdmivkaalfLLIGIMIKITGTTDLKKMGGLIKRY- 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2587643732 236 kiPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRL 296
Cdd:PRK07691 370 --PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-293 |
3.16e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 48.87 E-value: 3.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 55 AATKYFLVQAAASTLLLFSSAINAWHTGQ--WDITQLTH---PTACMLLT-----IAISMKLGLVPFHFWFPEVLQGVSL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 125 STSLLLATVM-KLPPTTLLFLTSPSLNPT------LLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHN 197
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAF 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 198 PKLTLITFYL----YSLTTAAVFSVLNT----TNTLKLSTMMTSWTKIPsLTAALMVM--LLSLAgLPPLTGFLPKWLII 267
Cdd:PRK12561 298 TDLGISGAMLqmisHGLIAAALFFLTGVtyerTHTLSIPNMGGLAKVMP-KTFALFTAssMASLA-LPGMSGFVSELTVF 375
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2587643732 268 QELTKQE---------------LTVIATMIALLSLLGLFFY 293
Cdd:PRK12561 376 LGITSSDvysstfrtitillaaVGLILTPIYLLSMLRRVFY 416
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-344 |
3.16e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 48.61 E-value: 3.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 82 GQWDITQLTHPTACMLLTIAISM----KLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLL-----FLTSPSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 153 LLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHN-PKLTLITFYLYSLTTAAVFSVLNTT-----NTLK 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 227 LSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQ-ELTKQELTVIATMIALLSLLGLFFYLRLAYCaTITLP 305
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILEsSLFYPHNSLMILMIFLATALTAAYSTRFTLA-VLWSP 403
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2587643732 306 PNSTNHMKQWQVNKSVDTPTTILTTLSI---------MLLPLSPMILT 344
Cdd:MTH00207 404 NSSSPYHHLEDEDKSLTTPMLLLTLGAItsgsalnwwLPTPQEEPILP 451
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
100-268 |
5.63e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.03 E-value: 5.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 100 IAISMKLGLvpfHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPTLLSTMAI----ASTAL-GGWMGLNQTQ 174
Cdd:MTH00032 236 IGKSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgALTAFfAATVGLVQND 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 175 IRKILAFSSISHLGWMTIIL----THNPKLTLITFYLY--SLTTAAVFSVLNTTNTLK--LSTMMTSWTKIPSLTAALMV 246
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIgiegSHNVGLFHLVNHAFfkALLFLSAGSVIHSTTVDEqdMRKMGGLIHSIPFTYTMMLI 392
|
170 180
....*....|....*....|..
gi 2587643732 247 MLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-286 |
1.00e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 47.49 E-value: 1.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 110 PFHFWFPEVLQG-VSLSTSLLLATVMKLPpttlLFLTS---PSLNPT-----LLSTMAIASTALGGWMGLNQTQIRKILA 180
Cdd:PRK12648 225 PFHFWLPHAMAApTPVSAYLHSATMVKAG----VFLLArlwPVLAGTeewfwIVGGAGLITLLLGAYFALFQHDLKGLLA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 181 FSSISHLGWMTIILTHNPKLTLItfylyslttAAVFSVLNTTnTLKLSTMMTS------------------WTKIPsLTA 242
Cdd:PRK12648 301 YSTISHLGLITLLLGLGSPLAAV---------AAIFHIINHA-TFKASLFMAAgiidhetgtrdmrrlsglRRLMP-ITA 369
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2587643732 243 AL-MVMLLSLAGLPPLTGFLPKWLIIQELTKQE--------LTVIATMIALLS 286
Cdd:PRK12648 370 TLaMVAAAAMAGVPLLNGFLSKEMFFAETLDTHllgsldwlLPVAATLAGAFS 422
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-190 |
1.48e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 46.62 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 55 AATKYFLVQAAASTLLLFSSAINAWHTG--QWDITQL---THPTACMLL-----TIAISMKLGLVPFHFWFPEVLQGVSL 124
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLllapiLVGFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2587643732 125 STSLLLATVM-KLPPTTLL------FLTSPSLNPTLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK06473 238 PVSVLLAGVLlKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYI 310
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
2.78e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.97 E-value: 2.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 107 GLVPFHFWFPEVLQGVSLSTSLLLATV-MKLPPTTLLFLTSPSLNPTL-----LSTMAIASTALGGWMGLNQTQIRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 181 FSSISHLG--------WMTIILTHNPKLTLITFY--LYSLTTAAVF---------SVLNTTNTLKLSTMMTSWTKIPSLT 241
Cdd:PRK08042 275 YHTLENIGiillglgaGVTGIALEQPALIALGLVggLYHLLNHSLFksvlflgagSVWFRTGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 2587643732 242 AALMVMLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
97-268 |
4.91e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 45.09 E-value: 4.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 97 LLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVM-KLPPTTL------LFLTSPSLNPTLLSTMAIASTALGGWMG 169
Cdd:PRK07363 210 GLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 170 LNQTQIRKILAFSSISHLGWMTIILTHNPKLTL---------------ITFYLYSLTTAAVfsvlNTTNTLKLSTMMTSW 234
Cdd:PRK07363 290 IAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLlgavaqmishglilaLLFHLVGIVERKV----GTRDLDVLNGLMNPI 365
|
170 180 190
....*....|....*....|....*....|....
gi 2587643732 235 TKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 366 RGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
13-190 |
7.93e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 44.30 E-value: 7.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 13 LLMGTIITISSNHW---MMAW--TGLEINTLailpLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDIT 87
Cdd:PRK08168 109 VLAAVHLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 88 QL-----THPT------ACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLpPTTLLFLTSPSLNP----- 151
Cdd:PRK08168 185 ALwahlaAQGAspslqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNL-GGFVLIRFAPLLEQappar 263
|
170 180 190
....*....|....*....|....*....|....*....
gi 2587643732 152 TLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK08168 264 WLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
100-267 |
1.25e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 43.76 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 100 IAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATV-MKLPPTTLLFLTSP-------SLNPTLLStMAIASTALGGWMGLN 171
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGIlLKLGGYGLVRLSWPilplgaqNLAPAVIA-MGIVGIVYGSFATCR 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 172 QTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNTLKLSTMMTSWTK--------IPSLTAA 243
Cdd:MTH00226 317 QIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKyyrglsitMPIWGTI 396
|
170 180
....*....|....*....|....
gi 2587643732 244 LMVMLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 397 MIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
92-293 |
1.81e-04 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 43.21 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 92 PTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSLNPT-----LLSTMAIASTALGG 166
Cdd:PRK12646 210 IPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGS 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 167 WMGLNQTQIRKILAFSSISHLGW-MTII-----LTHNPKLTLITFYLYSLTtAAVFSVLN-------------------- 220
Cdd:PRK12646 290 ITALKQWDLKGILAYSTISQLGMiMAMVgigggYAQHQQDAIASIYVFVLF-AALFHLMNhaifkcalfmgvgiidheag 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 221 TTNTLKLSTMMTSWtkiPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTK--------QELTVIATMIALLSLLGLFF 292
Cdd:PRK12646 369 TRDIRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfsLISMIIIVFIGVIASIFTFT 445
|
.
gi 2587643732 293 Y 293
Cdd:PRK12646 446 Y 446
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
27-270 |
2.25e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 42.95 E-value: 2.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 27 MMAWtglEINTLAILPLISKSH-HPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWD---ITQLTHP-----TACML 97
Cdd:PRK06521 139 LVAW---ETMSLSSWFLVIANHrEAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDfaaMRAAHLSpfwasLVFLL 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 98 LTIAISMKLGLVPFHFWFPE-----------VLQGVSLSTSL--LLATVMKLPPTTLLFLTSPSLnptllsTMAIASTAL 164
Cdd:PRK06521 216 ALFGFGAKAGLVPLHVWLPRahpaapshvsaLMSGVMLKVAIygILRVVFDLLGAPGWWWGVLVL------ALGAISAVL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 165 GGWMGLNQTQIRKILAFSSISHLGW--------MTIILTHNPKLTLITFY--LYSLTTAAVF---------SVLNTTNTL 225
Cdd:PRK06521 290 GVLYALAEHDLKRLLAYSTIENIGIifvglglaMVFIAYGMPLLAALALTaaLYHLLNHALFksllflgagAVLHATGTR 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2587643732 226 KLSTM-----MTSWTKIPSLTAALmvmllSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06521 370 DMEKLgglirRMPWTAWAFLIGCL-----AISALPPLNGFVSEWLLLQSL 414
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-295 |
2.36e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 42.82 E-value: 2.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 13 LLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAA------STLLLFSSAINAWHTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 87 TQLTHPT----------ACMLLTIAISMKLGLVPFHFWFPEV-LQGVSLSTSLLLATVMKLPPTTLLFLTS--------P 147
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrqsgaaE 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 148 SLNPTLLStMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKL----TLITFYLYSLTTAAVFSVLNTTN 223
Cdd:PRK08676 271 QFSNVLIG-LGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLalfwMLFHMLAHSLVKSGLFFSAGILH 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2587643732 224 TLKLSTMMTSWTKIPSLT--AALMVMLLSLA--GLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLG---LFFYLR 295
Cdd:PRK08676 350 RQYRSDRFDRIFDVFRLQpvAAWGVILGSAAiiGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAssfAIFLLK 428
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
10-288 |
2.67e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.86 E-value: 2.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 10 SISLLMGTIITISSNHWMM--AWTGLEINTLAILPLISKSHHPRAIeaatkyFLVQAAASTLLLFSSAINAWH-TGQWDI 86
Cdd:PRK06459 79 ILTILGMAIVLTSDNYLLFlaGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGTTNF 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 87 TQLTHPTACMLLTIAISMKLGLVPFHF--WFPEVLQGVSLSTSLLLATVMKLPP----TTLLFLTSPS----LNPTLLST 156
Cdd:PRK06459 153 SYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGvygiLKMTILTQTIpigyFGLTILAI 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 157 MAIaSTALGGWMGLNQTQIRKILAFSSISHLGWM-----TIILTHNPKLTLITFYLYSLTTAAVFSVLNTTNtLKLSTMM 231
Cdd:PRK06459 233 GAF-SILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSFAHSVAKTG-LFLSSGL 310
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2587643732 232 TSWTKIPSLTA--------ALMVMLLSLAGLPPLTGFLPKWLIIQELTkQELTVIATMIALLSLL 288
Cdd:PRK06459 311 QEKQSITYSKKirnrwielGLTLLASSLSGLLPNIGGVASWLLLESLF-MFAYVLHNVISILFIV 374
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-284 |
7.49e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 41.34 E-value: 7.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 10 SISLLMGTIITISSNHWMMaWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAI---NAWHTGQW-- 84
Cdd:PRK06589 123 NLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVIliyTKTGNLDFvs 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 85 -DITQLTHPTACMLLTIAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATVM----KLPPTTLLFLTSPSLNPTLLSTM-- 157
Cdd:PRK06589 202 gGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILLYIFGLSYLQRIFAEfn 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 158 -----AIASTALGGWMGLNQTQIRKILAFSSISHLGWMTI---ILThNPKLTLITFYL--YSLTTAAVFSVLNTTNTLKL 227
Cdd:PRK06589 282 wlifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLsafILT-PKALGAAILHLvsHSFAKICLFYSMGSIYSLKK 360
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2587643732 228 STMMTSWTKIPSLTAALMVML----LSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIAL 284
Cdd:PRK06589 361 EDQVDKLHGTSKSFPLISFIIsissLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
77-267 |
8.65e-04 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 41.30 E-value: 8.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 77 NAWHTGQWDITQLThpTACMLLTIAISMKLGLVPFHFWFPEVLQG---VSlstSLLLATVMKlppTTLLFL---TSP--S 148
Cdd:PRK06590 204 AAPQFFGLGWSALT--LICLLLFIGAMGKSAQFPLHTWLPDAMEGptpVS---ALIHAATMV---TAGVYLvarMSPlfE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 149 LNPTLLSTMAI--ASTAL-GGWMGLNQTQIRKILAFSSISHLGWMTIILthnpKLTLITFYLYSLTTAAVF--------- 216
Cdd:PRK06590 276 LSPEALLFVAIvgAVTALfAAFIGLVQTDIKRVLAYSTMSQLGYMFLAL----GVGAYAAAIFHLMTHAFFkallflgag 351
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2587643732 217 SVLNTTN-TLKLSTMMTSWTKIPsLTAALMVM-LLSLAGLPPLTGFLPKWLII 267
Cdd:PRK06590 352 SVIHAMHhEQDIRKMGGLRKKMP-VTYATFLIgTLALIGIPPFAGFFSKDEIL 403
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
50-286 |
1.45e-03 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 40.26 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 50 PRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQL--THPTACMLLTIAISMKLGLVPFHFWFPE------VLQG 121
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIagLGGTAAWLILIGFGVNAAFPPLHAWLPDaypeatVTGS 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 122 VSLS---TSLLLATVMKLPPTTLlfltspslnptLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWM-------T 191
Cdd:PRK12668 219 VFLSaftTKTAVYALARAFPGTE-----------LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMvagigigT 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 192 IILTHNPKLTLITFYLY-SLTTAAVFSVLNTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK12668 288 ALAINGAVAHAFNHILYkGLLFMSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAA 367
|
250
....*....|....*.
gi 2587643732 271 TKQELTVIATMIALLS 286
Cdd:PRK12668 368 GEDHYVWVWLLLLLAS 383
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
143-334 |
2.59e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 39.44 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 143 FLTSPSLNPTLLSTMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHN-PKLTLitFYLYsltTAAVFSVL-- 219
Cdd:MTH00151 232 FLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGmPSLAL--FHLY---THALFKALlf 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 220 --------NTTNTLKLSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLF 291
Cdd:MTH00151 307 lcagsiihSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTA 386
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2587643732 292 FY-LRLAYCaTITLPPNSTNHMKQWQVNKSVDTPTTILTTLSIM 334
Cdd:MTH00151 387 LYsARLSFC-LVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALI 429
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
95-303 |
4.36e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 38.84 E-value: 4.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 95 CMLL---TIAISMKLGLvpfHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSPSL--NPTLLSTMAI--ASTAL-GG 166
Cdd:MTH00210 214 CLLLfigAVGKSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFegSPLALTIVTIlgALTAFfAA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 167 WMGLNQTQIRKILAFSSISHLGWMTIILthnpKLTLITFYLYSLTTAAVF---------SVLNTTNTLKLSTMMTSWTK- 236
Cdd:MTH00210 291 TVGVVQNDLKKVIAYSTCSQLGYMVMVC----GISNYSTSLFHLMNHAFFkallflsagSVIHAVSDEQDMRKMGGLIKs 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2587643732 237 IPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLS-LLGLFFYLRLAYCATIT 303
Cdd:MTH00210 367 IPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLIYLTFIT 434
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
110-190 |
7.52e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.08 E-value: 7.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 110 PFHFWFPEVLQGVSLSTSLLLATVMKLPPTTLLFLTSP--SLNPTLLSTMAI--ASTA-LGGWMGLNQTQIRKILAFSSI 184
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPvfEQFPAVMTVIAWtgAITAfLGASIALTQNDIKKGLAYSTI 324
|
....*.
gi 2587643732 185 SHLGWM 190
Cdd:PRK07376 325 SQLGYM 330
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
13-296 |
7.70e-03 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 38.21 E-value: 7.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 13 LLMGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQLTHP 92
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 93 TACMLLTIAI----SMKLGLV------PFHFWFPEVLQG----VSLSTSLLLATVMKLPPTTLLFLTSPSLNPT----LL 154
Cdd:PRK08377 197 AGTIDPTVAQvglaLLIFGLAveaelfPLNAWAPDAYQAaphpITVMFSAFVVKAGLYAMARILYLMQNANGWSsvlkLV 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 155 STMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSLTTA--------AVFSVLNTTNTLK 226
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAivkallflAVGYVGITLGGTE 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 227 LSTMMTSWTKIPSLTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRL 296
Cdd:PRK08377 357 IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRL 426
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-296 |
8.79e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 37.84 E-value: 8.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 15 MGTIITISSNHWMMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSAINAWHTGQWDITQ----LT 90
Cdd:PRK06591 126 TGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQ 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 91 HPTACMLLTIAIS-------MKLGLVPFHFWFPEVLQGVS---------LSTSLLLATVMKLPPTTLLFLTSPSLNPTLL 154
Cdd:PRK06591 206 EHTNSRIITIAIGffligaiLKTAFFPMHFWMMRAYNNTAsvilvylagISTIIGIYIIYKFTYIIIGYETIKTAITNFI 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 155 STMAIASTALGGWMGLNQTQIRKILAFSSISHLGWMTIILTHNPKLTLITFYLYSlttaavfSVLNTTNTLKLSTMMTSW 234
Cdd:PRK06591 286 RPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLA-------DSINKIALFLIDAYNESY 358
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2587643732 235 TKIPSLTAALMVMLLSLaGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSLLGLFFYLRL 296
Cdd:PRK06591 359 KREPNKVLIIIAIICSC-GLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKM 419
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
95-298 |
9.05e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 37.70 E-value: 9.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 95 CMLLTIAISMKLGLVPFHFWFPEVLQG---VSL---STSLLLATVMKLPPTTLLFLTSPSLNPTLLsTMAIASTALGGWM 168
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAMAAptpVSAlvhSSTLVTAGVYLLIRFFPSLFSSPFFSMSLL-LLGSLTTLMASMS 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 169 GLNQTQIRKILAFSSISHLGWMTIILTHN-PKLTLITFYLYSLTTAAVF--------SVLNTTNTLKLSTMmtsWTKIPS 239
Cdd:MTH00209 257 ANVESDLKKIIALSTLSQLGLMMCSLGLNqPELAFFHLITHALFKALLFicagniihSHGHSQDIRMVGNL---WYQMPI 333
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 240 LTAALMVMLLSLAGLPPLTGFLPKWLIIQELTKQELTVIATMIALLSL-LGLFFYLRLAY 298
Cdd:MTH00209 334 TSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSY 393
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
100-196 |
9.53e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 37.74 E-value: 9.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2587643732 100 IAISMKLGLVPFHFWFPEVLQGVSLSTSLLLATV-MKLPPTTLLFLTSPSL-------NPtLLSTMAIASTALGGWMGLN 171
Cdd:MTH00204 217 LSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGIlLKLGGYGFLRFSWPLFpaaseyfAP-LIVMLSVIAVIYGSLTTCR 295
|
90 100
....*....|....*....|....*.
gi 2587643732 172 QTQIRKILAFSSISHLGWMTI-ILTH 196
Cdd:MTH00204 296 QVDFKRLIAYSSVAHMGLVPLgLFTH 321
|
|
| |
