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Conserved domains on  [gi|746557032|ref|WP_039587726|]
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MULTISPECIES: DUF3310 domain-containing protein [Terrabacteria group]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3310 super family cl13237
Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of ...
 7-64 1.03e-05

Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of unknown function.


The actual alignment was detected with superfamily member pfam11753:

Pssm-ID: 432050  Cd Length: 59  Bit Score: 39.59  E-value: 1.03e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 746557032    7 KHYaNEYGMELNEYFKHHFNYEELAGWYTMQVLKYLVRAGKKEGEsydKDRNKALDYA 64
Cdd:pfam11753   5 SHY-TKGDIEVIDVIEAQLTGEEFVGFCLGNAIKYVSRAGKKNGL---EDLKKAKWYL 58
 
Name Accession Description Interval E-value
DUF3310 pfam11753
Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of ...
 7-64 1.03e-05

Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of unknown function.


Pssm-ID: 432050  Cd Length: 59  Bit Score: 39.59  E-value: 1.03e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 746557032    7 KHYaNEYGMELNEYFKHHFNYEELAGWYTMQVLKYLVRAGKKEGEsydKDRNKALDYA 64
Cdd:pfam11753   5 SHY-TKGDIEVIDVIEAQLTGEEFVGFCLGNAIKYVSRAGKKNGL---EDLKKAKWYL 58
 
Name Accession Description Interval E-value
DUF3310 pfam11753
Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of ...
 7-64 1.03e-05

Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of unknown function.


Pssm-ID: 432050  Cd Length: 59  Bit Score: 39.59  E-value: 1.03e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 746557032    7 KHYaNEYGMELNEYFKHHFNYEELAGWYTMQVLKYLVRAGKKEGEsydKDRNKALDYA 64
Cdd:pfam11753   5 SHY-TKGDIEVIDVIEAQLTGEEFVGFCLGNAIKYVSRAGKKNGL---EDLKKAKWYL 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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