|
Name |
Accession |
Description |
Interval |
E-value |
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
1-1010 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 830.13 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1 MKLLAnVSLKNRSFIALVCVVVSILGAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDS 80
Cdd:COG0841 1 MNLSR-FFIRRPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 81 TSSTSRSGVSMVTVELTYGTDVARSANKVDAAIGRLKDRLPEGVD-PQVIAGGASEIPALVTAVSSDS-DQGQLADRLRT 158
Cdd:COG0841 80 ITSTSSEGSSSITVEFELGTDIDEALVDVQNAVDRARSDLPEDVEpPGVTKVNPSDFPVMVLALSSDDlDELELSDYAER 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 159 TVVPALEKLDGVSSVVLAGAPTKIVRVIPQQEKLTASGLTVSDVENAIKNAGSSLPGGTVTRGNQALDVTIGKDFSSLDQ 238
Cdd:COG0841 160 NIKDRLERVPGVGQVQIFGGREREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGGGDREYTVRTNGRLKTPEE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 239 LRTLMVTpsapaatpppkagraqtlsrnTVQRKPVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKE 318
Cdd:COG0841 240 FENIVIR---------------------TNDGSVVRLGDVARVEDGAEDYRSIARLNGKPAVGLAIQKQPGANALEVADA 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 319 VSQKLDDLLPTVGGNAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLV 398
Cdd:COG0841 299 VRAKLEELQASLPEGVELTIVYDQSEFIRASIEEVVKTLLEAILLVVLVVFLFLRSWRATLIPAVAIPVSLIGTFAVMYL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 399 FGYTLNMLTLAALTISIGRVVDDSIVVIENIKRHLTYGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGEL 478
Cdd:COG0841 379 LGFSLNILTLFALVLAIGIVVDDAIVVVENIERHMEEGLSPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQL 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 479 FRPFSLTVAIAMLSSLFVSLTIVPVLAFWFLKGNYGKDPRETAAIRDRAEQReersiLHRLYSPVLRVTQAHRIVTILVS 558
Cdd:COG0841 459 FRQFALTVAIALLISLFVALTLTPALCARLLKPHPKGKKGRFFRAFNRGFDR-----LTRGYGRLLRWALRHRKLTLLVA 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 559 IAIVVGTGFLFPLMTLNFLGDSGQNLASFSQTLPNGTSLKESSEKAAEAEKALLGIDGVTTVQTTIGAGQFSTGgqPNEI 638
Cdd:COG0841 534 LALLALSVLLFGRLPTEFFPEEDQGQIIVSVQLPPGTSLERTEAVVRQVEEILLEVPEVESVFSVVGFSGGGSG--SNSG 611
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 639 TYAITTKD----DADQEALRHRIDDTLKSLPDhGDISMQA--SGGPGGASTVNIDITGPTATARRDANDLIMDQLANPPA 712
Cdd:COG0841 612 TIFVTLKPwderDRSADEIIARLREKLAKIPG-ARVFVFQppAGGLGSGAPIEVQLQGDDLEELAAAAEKLLAALRQIPG 690
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 713 sVSQVTSDLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKVSLDGTDTDIYVAGDTKPV-TLNDLTKLSI 791
Cdd:COG0841 691 -LVDVRSDLQLGKPELQLDIDREKAAALGVTVADVASTLRAALGGRYVNDFNRGGREYDVRVQAPEEDRnSPEDLENLYV 769
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 792 AG-----VPLTDLATIEERNVVPELSTKNTQATVTIALTPA-GQDVGAVMKVAQDSIDAVKLPDGARASVGGAADDISQT 865
Cdd:COG0841 770 RTpdgemVPLSSVATIEEGTGPSSINRYNGQRSVTVSANLApGVSLGEALAAIEELAAELKLPPGVSIEFTGQAEEEQES 849
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 866 FGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLVDLV 945
Cdd:COG0841 850 FSSLGLAFLLALLLVYLVLAAQFESFIQPLIILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNAILLVDFA 929
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 960339101 946 NQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFISKPLAVVVIGGLVSS 1010
Cdd:COG0841 930 NQLREEGMSLREAILEAARLRLRPILMTSLATILGLLPLALG-TGAGAEFRQPLGIAVIGGLLFS 993
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
4-1010 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 565.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 4 LANVSLKNRSFIALVCVVVSILGAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSS 83
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 84 TSRSGVSMVTVELTYGTDVARSANKVDAAIGRLKDRLPEGVDPQVIA-GGASEIPALVTAVSSDS---DQGQLADRLRTT 159
Cdd:pfam00873 81 QSSYGLSSITLTFELGTDIDIARQDVQNRLQLATPLLPEGVQRPGISvIKTSLGPIMVLAVTSPDgsyTQTDLRDYADTN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 160 VVPALEKLDGVSSVVLAGAPTKIVRVIPQQEKLTASGLTVSDVENAIKNAGSSLPGGTVTRGNQALDVTIGKDFSSLDQL 239
Cdd:pfam00873 161 IKPQLSRVPGVGDVQLFGGSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQLQSAEDF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 240 RTLMVTpsapaatpppkagraqtlsrnTVQRKPVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKEV 319
Cdd:pfam00873 241 EKIIVK---------------------NQDGSPVRLRDVATVELGSELYRGFATFNGKPAVGLGVQKLPGANAIETADAV 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 320 SQKLDDLLPTVGGNAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLVF 399
Cdd:pfam00873 300 RAKLAELKPTFPQGVEIVVVYDTTPFIRASIEEVVKTLLEAIVLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAF 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 400 GYTLNMLTLAALTISIGRVVDDSIVVIENIKRHL-TYGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGEL 478
Cdd:pfam00873 380 GFSINTLTLGGLVLAIGLVVDDAIVVVENIERVLeENGLKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRI 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 479 FRPFSLTVAIAMLSSLFVSLTIVPVLAFWFLKGNygkdPRETAAIRDRAEQREERSILHRlYSPVLRVTQAHRIVTILVS 558
Cdd:pfam00873 460 FRQFAITIVLAILLSVLVALTLTPALCATLLKPR----REPKHGGFFRWFNRMFDRLTRG-YAKLLAKVLRHTAVVLLVA 534
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 559 IAIVVGTGFLFPLMTLNFLGDSGQNLASFSQTLPNGTSLKESSEKAAEAEKALLGIDGVTTVQTTIGAGQFSTGGQPNEI 638
Cdd:pfam00873 535 LLLVVGSVWLFVRIPTEFLPEEDEGVFVTSAQLPPGVSLDQTQRVMKQVEKILKEKPEVESVFAVTGFAFSGDNNGPNSG 614
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 639 TYAITTKD-------DADQEALRHRIDDTLKSLPDhGDISMQA-------SGGPGGASTVNIDITGPTATARRDANDLIM 704
Cdd:pfam00873 615 DAFISLKPwkerpgpEKSVQALIERLRKALKQIPG-ANVFLFQpiqlrglGTISGFRSDLQVKIFGDDLDALDEARNQIL 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 705 DQLANPPASVSqVTSDLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKVSLDGTDTDIYV-AGDTKPVTL 783
Cdd:pfam00873 694 AALAQLPGLSD-VRSDGQEDQPQLQVNIDREKAARLGVSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVqLPEDFRSSP 772
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 784 NDLTKLSIAG-----VPLTDLATIEERNVVPELSTKNTQATVTIALTPAGQDV-GAVMKVAQDSIDAVKLPDGARASVGG 857
Cdd:pfam00873 773 EDIGQLYVRNpygkmIPLSAFAKIEWGYGPPSINRYNGFRSIVISGNVAAGDSlGDAMEAMAQIAKQVKLPPGYGYTWTG 852
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 858 AADDISQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVTN 937
Cdd:pfam00873 853 QFEQEQLAGNSLPILIALALLVVFLVLAALYESWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKN 932
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 960339101 938 AIVLVDLVNQYRRD-GMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFISKPLAVVVIGGLVSS 1010
Cdd:pfam00873 933 AILMVEFANELREQeGKSLEEAILEACRLRLRPILMTALAAILGVLPLALS-TGAGSELQQPLGIVVFGGLVTS 1005
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
8-1010 |
2.73e-167 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 526.13 E-value: 2.73e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 8 SLKNRSFIALVCVVVSILGAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSSTSRS 87
Cdd:COG3696 9 SLRNRLLVLLLTLLLAAAGIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVKEVRSISRF 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 88 GVSMVTVELTYGTDV--ARS--ANKVDAAigrlKDRLPEGVDPQV--IAGGASEIpaLVTAVSSDSDQGQLADrLRT--- 158
Cdd:COG3696 89 GLSVVTVIFEDGTDIywARQlvLERLQQV----REQLPAGVTPELgpISTGLGEI--YQYTLESDPGKYSLME-LRTlqd 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 159 -TVVPALEKLDGVSSVVLAGAPTKIVRVIPQQEKLTASGLTVSDVENAIKNAGSSLPGGTVTRGNQALDV-TIGKdFSSL 236
Cdd:COG3696 162 wVIRPQLRSVPGVAEVNSFGGFVKQYQVLVDPAKLRAYGLTLDDVIEALERNNANVGGGYIERGGQEYLVrGIGL-IRSL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 237 DQLRTLMVTpsapaatpppkagraqtlSRNTVqrkPVQLSSVASVE--HVEK--DATsisRTNGRESLVLVVTAEANGNV 312
Cdd:COG3696 241 EDIENIVVK------------------TRNGT---PVLLRDVAEVRigPAPRrgAAT---LNGEGEVVGGIVLMLKGENA 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 313 VDVSKEVSQKLDDLLPTVGGNAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMA 392
Cdd:COG3696 297 LEVIEAVKAKLAELKPSLPEGVKIVPFYDRSDLIDRAIHTVTKNLLEGALLVILVLFLFLGNLRAALIVALAIPLSLLFA 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 393 FLGMLVFGYTLNMLTLAALTISIGRVVDDSIVVIENIKRHLT------YGEPKMQAVVAAVKEVAGAVTSSTLATVIVFL 466
Cdd:COG3696 377 FIVMRLFGISANLMSLGGLAIDFGIIVDGAVVMVENILRRLEenraagTPRERLEVVLEAAREVRRPIFFATLIIILVFL 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 467 PIAVVTGMAGELFRPFSLTVAIAMLSSLFVSLTIVPVLAFWFLKGNygKDPRETAAIRdraeqreersILHRLYSPVLRV 546
Cdd:COG3696 457 PIFTLEGVEGKLFRPMALTVIFALLGALLLSLTLVPVLASLLLRGK--VPEKENPLVR----------WLKRLYRPLLRW 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 547 TQAHRIVTILVSIAIVVGTGFLFPLMTLNFL-----GDsgqnLAsFSQTLPNGTSLKESSEKAAEAEKALLGIDGVTTVQ 621
Cdd:COG3696 525 ALRHPKLVLAVALVLLVLALALFPRLGSEFLpeldeGD----LL-VMATLPPGISLEESVELGQQVERILKSFPEVESVV 599
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 622 TTIGAGQFSTGGQP-NEITYAITTKDDA------DQEALRHRIDDTLKSLP----------DHGdISMQASggpGGASTV 684
Cdd:COG3696 600 SRTGRAEDATDPMGvNMSETFVILKPRSewrsgrTKEELIAEMREALEQIPgvnfnfsqpiQMR-VDELLS---GVRADV 675
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 685 NIDITGP-TATARRDANDlIMDQLANPPASVSqVTSDLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKV 763
Cdd:COG3696 676 AVKIFGDdLDVLRRLAEQ-IEAVLKTVPGAAD-VQVERVTGLPQLDIRIDRDAAARYGLNVADVQDVVETAIGGKAVGQV 753
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 764 sLDGTD-TDIYVAGD----TKPVTLNDLTKLSIAG--VPLTDLATIEERNVVPELSTKNTQATVTIALTPAGQDVGAVMK 836
Cdd:COG3696 754 -YEGERrFDIVVRLPeelrDDPEAIRNLPIPTPSGaqVPLSQVADIEVVEGPNQISRENGRRRIVVQANVRGRDLGSFVA 832
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 837 VAQDSIDA-VKLPDGARASVGGAADDISQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLT 915
Cdd:COG3696 833 EAQAKVAEqVKLPPGYYIEWGGQFENLQRATARLAIVVPLALLLIFLLLYLAFGSVRDALLILLNVPFALIGGVLALWLR 912
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 916 NTPLGLPSMIGLLMLIGIVVTNAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFI 995
Cdd:COG3696 913 GMPLSVSAGVGFIALFGVAVLNGVVLVSYINQLRAEGLDLREAIIEGALERLRPVLMTALVAALGLLPMALS-TGPGSEV 991
|
1050
....*....|....*
gi 960339101 996 SKPLAVVVIGGLVSS 1010
Cdd:COG3696 992 QRPLATVVIGGLITS 1006
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
16-1010 |
4.07e-150 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 479.90 E-value: 4.07e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 16 ALVCVVVSILGAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSSTSRSGVSMVTVE 95
Cdd:NF033617 12 LLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQSSLGYSTITLQ 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 96 LTYGTDVARSANKVDAAIGRLKDRLPEGVDPQVI--AGGASEIPALVTAVSSDS-DQGQLADRLRTTVVPALEKLDGVSS 172
Cdd:NF033617 92 FRLGTDLDVALSEVQAAINAAQSLLPSEAPDPPVyrKANSADTPIMYIGLTSEEmPRGQLTDYAERVLAPKLSQINGVGS 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 173 VVLAGAPTKIVRVIPQQEKLTASGLTVSDVENAIKNAGSSLPGGTVTRGNQALDVTIGKDFSSLDQLRTLMVtpsapaat 252
Cdd:NF033617 172 VDVSGGQRPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVRGDSVVSTVRANDQLKTAEDYEDLVI-------- 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 253 pppkagraqtlsRNTVQRKPVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKEVSQKLDDLLPTVGG 332
Cdd:NF033617 244 ------------KYADNGAPVRLGDVATVELGAENVRNRAWANGVPAVVLGINRQPGANPIEVADEIRALLPELQETLPK 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 333 NAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALT 412
Cdd:NF033617 312 NIKVNVLYDRTRFIRASIDEVESTLLEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMALV 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 413 ISIGRVVDDSIVVIENIKRHLTYGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFSLTVAIAMLS 492
Cdd:NF033617 392 LAIGLVVDDAIVVVENIHRHIEEGESPLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFREFAVTLAGAVII 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 493 SLFVSLTIVPVLAFWFLKGN--YGKDPRETAAIRDRAEQReersilhrlYSPVLRVTQAHRIVTILVSIAIVVGTGFLFP 570
Cdd:NF033617 472 SGIVALTLTPMMCSRLLKANekPGRFARAVDRFFDGLTAR---------YGRGLKWVLKHRPLTLVVALATLALLPLLYV 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 571 LMTLNFLGDSGQNLASFSQTLPNGTSLKESSEKAAEAEKALLGIDGVTTVQTTIGAgqfstGGQPNEIT--YAITTKD-- 646
Cdd:NF033617 543 FIPKELAPSEDRGVIFGMIQAPQSISLDYMSAKMRDVEKILSSDPEVQSLTSFNGV-----GGNPGDNTgfGIINLKPwd 617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 647 --DADQEALRHRIDDTLKSLPDhGDISMQA----SGGPGGASTVNIDITGPTA-TARRDANDLIMDQLANPPASVSqVTS 719
Cdd:NF033617 618 erDVSAQEIIDRLRPKLAKVPG-MDLFLFPlqdlPGGAGSSLPQYQVTLTPSDyDSLFTWAEKLKEKLRKSPQFAD-VDS 695
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 720 DLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKVSLDGTDTDIYVAGDTK----PVTLNDLTKLSIAG-- 793
Cdd:NF033617 696 DLQDKGPELNVDIDRDKAARLGISMQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRyrlnPEALNQIYVRSNDGkl 775
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 794 VPLTDLATIEERNVVPELSTKNTQATVTIALTPA-----GQDVGAVMKVAQDsidavKLPDGARASVGGAADDISQTFGQ 868
Cdd:NF033617 776 VPLSTLAKIEERAAPLSLNHFNQFNSATLSFNLApgvslGEAIEALDQAAKE-----LLPSGISGSFQGAARAFQEEGSS 850
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 869 IGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLVDLVNQY 948
Cdd:NF033617 851 LLFLFLLALAAIYLVLAIQYESFVDPLTILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFANEL 930
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 960339101 949 RRD-GMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFISKPLAVVVIGGLVSS 1010
Cdd:NF033617 931 QRHqGLSRREAIYQAAALRLRPILMTTLAMLLGAIPLMLS-TGAGAESRFPLGIVIVGGLGVG 992
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
8-1041 |
7.53e-102 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 349.06 E-value: 7.53e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 8 SLKNRSFIALVCVVVSILGAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSSTSRS 87
Cdd:TIGR00914 9 SVAQRWLVLLATLVMAILGIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLETTRSLSRY 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 88 GVSMVTVELTYGTDVARSANKVDAAIGRLKDRLPEGVDPQV--IAGGASEI-----PALVTAVSSDSDQGQLADrLRTT- 159
Cdd:TIGR00914 89 GLSQVTVIFKDGTDLYFARQLVNERLQQARDNLPEGVSPEMgpISTGLGEIflytvEAEEGARKKDGGAYTLTD-LRTIq 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 160 ---VVPALEKLDGVSSVVLAGAPTKIVRVIPQQEKLTASGLTVSDVENAIKNAGSSLPGGTVTRGNQALDVTIGKDFSSL 236
Cdd:TIGR00914 168 dwiIRPQLRTVPGVAEVNSIGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIERRGEQYLVRAPGQVQSM 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 237 DQLRTLMVTpsapaatpppkagraqtlsrnTVQRKPVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVS 316
Cdd:TIGR00914 248 DDIRNIVIA---------------------TGEGVPIRIRDVARVQIGKELRTGAATENGKEVVLGTVFMLIGENSRTVA 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 317 KEVSQKLDDLLPTVGGNAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGM 396
Cdd:TIGR00914 307 QAVGDKLETINKTLPEGVEIVTTYDRSQLVDAAIATVKKNLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGM 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 397 LVFGYTLNMLTLAALtiSIGRVVDDSIVVIENIKRHLT-----YGEP-----KMQAVVAAVKEVAGAVTSSTLATVIVFL 466
Cdd:TIGR00914 387 VFQGISANLMSLGAL--DFGLIVDGAVVIVENAHRRLAeaqhhHGRQltlkeRLHEVFAASREVRRPLIFGQLIITLVFL 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 467 PIAVVTGMAGELFRPFSLTVAIAMLSSLFVSLTIVPVL-AFWflkgnygkdpretaaIRDRAEQREERSI--LHRLYSPV 543
Cdd:TIGR00914 465 PIFTLTGVEGKMFHPMAFTVVLALAGAMILSLTFVPAAvALF---------------IRGKVAEKENRLMrvLKRRYEPL 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 544 LRVTQAHRIVTILVSIAIVVGTgflfpLMTLNFLGD------SGQNLASFSQTLPnGTSLKESSEKAAEAEKALLGIDGV 617
Cdd:TIGR00914 530 LERVLAWPAVVLGAAAVSIVLV-----VWIASRVGGefipslNEGDLAYQALRIP-GTSLAQSVAMQQTLEKLIKSFPEV 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 618 TTVQTTIGAGQFSTGGQPNEI--TYAITTKDD------ADQEALRHRIDDTLKSLPDHGD-----ISMQASGGPGGA-ST 683
Cdd:TIGR00914 604 ARVFAKTGTAEIATDPMPPNAsdTYIILKPESqwpegkKTKEDLIEEIQEATVRIPGNNYeftqpIQMRFNELISGVrSD 683
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 684 VNIDITGPTATARRDANDLIMDQLANPPAsVSQVTSDLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKV 763
Cdd:TIGR00914 684 VAVKVFGDDLDDLDATAEKISAVLKGVPG-AADVKVEQTTGLPYLTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGET 762
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 764 sLDGT---DTDIYVAGDTK---------PVTLNDLTKLSIAGVPLTDLATIEERNVVPELSTKNTQATVTIALTPAGQDV 831
Cdd:TIGR00914 763 -FEGDrrfDIVIRLPESLRespqalrqlPIPLPLSEDARKQFIPLSDVADLRVSPGPNQISRENGKRRVVVSANVRGRDL 841
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 832 GAVMKVAQDSIDA-VKLPDGARASVGGAADDISQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFG 910
Cdd:TIGR00914 842 GSFVDDAKKAIAEqVKLPPGYWITWGGQFEQLQSATKRLQIVVPVTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGGVF 921
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 911 LLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTG 990
Cdd:TIGR00914 922 ALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRKLLEEGPSLDEAVYEGALTRVRPVLMTALVASLGFVPMAIA-TG 1000
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|.
gi 960339101 991 YSAFISKPLAVVVIGGLVSSTLLTLVLVPVLYRMVEGPGEKRRLRREAEQA 1041
Cdd:TIGR00914 1001 TGAEVQRPLATVVIGGIITATLLTLFVLPALYRLVHRRRHKGRKEHEPLEG 1051
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
11-1009 |
4.01e-87 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 306.66 E-value: 4.01e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 11 NRSFIALVCVVVSIL-GAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSSTSRS-G 88
Cdd:TIGR00915 7 DRPIFAWVIAIIIMLaGTLSILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSSSSDSdG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 89 VSMVTVELTYGTDVARSANKVDAAIGRLKDRLPEGVDPQ-VIAGGASEIPALVTAVSSDS---DQGQLADRLRTTVVPAL 164
Cdd:TIGR00915 87 SMTITLTFEQGTDPDIAQVQVQNKLQLATPLLPQEVQRQgVRVEKASSNFLMVIGLVSDDgsmTKEDLSDYAASNMVDPL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 165 EKLDGVSSVVLAGAPTKIvRVIPQQEKLTASGLTVSDVENAIK--NA--GSSLPGGTVTRGNQALDVTI-GKD-FSSLDQ 238
Cdd:TIGR00915 167 SRLEGVGDVQLFGSQYAM-RIWLDPAKLNSYQLTPADVISAISaqNAqiSAGQLGGLPAVPGQQLNATIiAQTrLQTPEQ 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 239 LRTLMVtpsapaatpppkagRAQTLSRNtvqrkpVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKE 318
Cdd:TIGR00915 246 FENILL--------------KVNTDGSQ------VRLKDVARVELGGENYSISARFNGKPASGLAIKLATGANALDTAKA 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 319 VSQKLDDLLPTVGGNAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLV 398
Cdd:TIGR00915 306 VKAELAVLEPFFPQGMKYVYPYDTTPFVEASIEEVVHTLIEAIVLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAA 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 399 FGYTLNMLTLAALTISIGRVVDDSIVVIENIKRHLT-YGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGE 477
Cdd:TIGR00915 386 FGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVMAeEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGA 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 478 LFRPFSLTVAIAMLSSLFVSLTIVPVLAFWFLKGNYGKDPRETAAIRDRAEQREERSILHRlYSPVLRVTQAHRIVTILV 557
Cdd:TIGR00915 466 IYRQFSITIVSAMALSVLVALILTPALCATMLKPIEKGEHHEKKGGFFGWFNRMFDSSTHG-YENGVGKILRRRGRYLLV 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 558 SIAIVVGTGFLFPLMTLNFLGDSGQNLASFSQTLPNGTSLKESSEKAAEAEKALLG--IDGVTTVQTTIGAGqFSTGGQP 635
Cdd:TIGR00915 545 YVLLVGGMVFLFVRLPTSFLPDEDQGVFMTIVQLPAGATAERTQAVLAQVTKYLLAkeKANVESVFTVNGFS-FAGRGQN 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 636 NEITYAI------TTKDDADQEALRHRIDDTLKSLPDHGDI--SMQASGGPGGASTVNI---DITGPTATARRDANDLIM 704
Cdd:TIGR00915 624 MGMAFIRlkdweeRTGKENSVFAIAGRATGHFMQIKDAMVIafVPPAILELGNATGFDFflqDRAGLGHEALLQARNQLL 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 705 dQLANPPASVSQVTSDLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKVSLDGTDTDIYVAGDTK----P 780
Cdd:TIGR00915 704 -GLAAQNPALTRVRPNGLEDEPQLKIDIDREKAQALGVSIADINTTLSTAWGSSYVNDFIDRGRVKRVYVQAEEDarmsP 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 781 VTLNDLTKLSIAG--VPLTDLATIEERNVVPELSTKNTQATVTIALTPA-----GQDVGAVMKVAQdsidavKLPDGARA 853
Cdd:TIGR00915 783 EDINKWYVRNASGemVPFSAFATVRWEYGSPQLERYNGLPSMEILGSAApgvstGQAMAAMEAIAQ------KLPPGFGF 856
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 854 SVGGAADDISQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGI 933
Cdd:TIGR00915 857 SWTGMSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPVSVMLVVPLGIIGALLATTLRGLSNDVYFQVGLLTTIGL 936
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 960339101 934 VVTNAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFISKPLAVVVIGGLVS 1009
Cdd:TIGR00915 937 SAKNAILIVEFAKELMAQGKSIVEAALEAARLRLRPILMTSLAFILGVVPLAIS-TGAGSGSQHAIGTGVFGGMVT 1011
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
17-1042 |
3.56e-85 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 300.88 E-value: 3.56e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 17 LVCVVVSILGAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSSTSRSGVSMVTVEL 96
Cdd:PRK10614 16 LLSLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSLGSTRIILQF 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 97 TYGTDVARSANKVDAAIGRLKDRLPEGVD--PQVIAGGASEIPALVTAVSSDS-DQGQLADRLRTTVVPALEKLDGVSSV 173
Cdd:PRK10614 96 DFDRDINGAARDVQAAINAAQSLLPSGMPsrPTYRKANPSDAPIMILTLTSDTySQGQLYDFASTQLAQTISQIDGVGDV 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 174 VLAGAPTKIVRVIPQQEKLTASGLTVSDVENAIKNAGSSLPGGTVTRGNQALDVTIGKDFSSLDQLRTLMVTPSapaatp 253
Cdd:PRK10614 176 DVGGSSLPAVRVGLNPQALFNQGVSLDDVRQAISNANVRRPQGAVEDGTHRWQIQTNDELKTAAEYQPLIIHYN------ 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 254 ppkagraqtlsrntvQRKPVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKEVSQKLDDLLPTVGGN 333
Cdd:PRK10614 250 ---------------NGAAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDRIRAKLPELRETIPAA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 334 AHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALTI 413
Cdd:PRK10614 315 IDLQIAQDRSPTIRASLEEVEQTLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTI 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 414 SIGRVVDDSIVVIENIKRHLTYGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFSLTVAIAMLSS 493
Cdd:PRK10614 395 ATGFVVDDAIVVLENISRHLEAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVTLSVAIGIS 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 494 LFVSLTIVPVLAFWFLKGNygkdpretaAIRDRAEQREERSILHRL---YSPVLRVTQAHRIVTILVSIAIVVGTGFLFP 570
Cdd:PRK10614 475 LLVSLTLTPMMCAWLLKSS---------KPREQKRLRGFGRMLVALqqgYGRSLKWVLNHTRWVGVVLLGTIALNVWLYI 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 571 LMTLNFL--GDSGQnLASFSQTlPNGTSLKESSEKAAEAEKAllgIDGVTTVQTTIGagqFSTGGQPNEITYAITTK--- 645
Cdd:PRK10614 546 SIPKTFFpeQDTGR-LMGFIQA-DQSISFQAMRGKLQDFMKI---IRDDPAVDNVTG---FTGGSRVNSGMMFITLKpls 617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 646 ---DDADQEALRHRIDDTLKSLPDHGDISMQ--ASGGPGGASTVNIDITGPTATARRDANDLIMDQLANPPaSVSQVTSD 720
Cdd:PRK10614 618 ersETAQQVIDRLRVKLAKEPGANLFLMAVQdiRVGGRQSNASYQYTLLSDDLAALREWEPKIRKALAALP-ELADVNSD 696
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 721 lTADQPAVVISVKSKEAAAR-GLTESAIVGLVAQELNPSSIGKVSLDGTDTDIYVAGDTK----PVTLNDLTKLSIAG-- 793
Cdd:PRK10614 697 -QQDKGAEMALTYDRDTMARlGIDVQAANSLLNNAFGQRQISTIYQPLNQYKVVMEVDPRytqdISALEKMFVINNEGka 775
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 794 VPLTDLATIEERNVVPELSTKNTQATVTIALT-PAGQDVGAVMKVAQDSIDAVKLPDGARASVGGAADDISQTFGQIGIA 872
Cdd:PRK10614 776 IPLSYFAKWQPANAPLSVNHQGLSAASTISFNlPTGKSLSDASAAIERAMTQLGVPSTVRGSFAGTAQVFQETMNSQLIL 855
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 873 ILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLVDLVNQYRRDG 952
Cdd:PRK10614 856 ILAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNG 935
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 953 -MPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFISKPLAVVVIGGLVSSTLLTLVLVPVLYRMVEGPGEK 1031
Cdd:PRK10614 936 nLTAQEAIFQACLLRFRPIMMTTLAALFGALPLVLS-GGDGAELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLR 1014
|
1050
....*....|.
gi 960339101 1032 RRLRREAEQAE 1042
Cdd:PRK10614 1015 FSRKPKQTVTE 1025
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
17-1007 |
2.66e-74 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 268.63 E-value: 2.66e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 17 LVCVVVSILGAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSSTSRSGVSMVTVEL 96
Cdd:PRK09579 16 VVSLLIVLLGFQAWSKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYMTSVSRQNFSIISIYA 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 97 TYGTDVARSANKVDAAIGRLKDRLPEGVDPQVIAGGASEIPAL--VTAVSSDSDQGQLADRLRTTVVPALEKLDGVSSVV 174
Cdd:PRK09579 96 RIGADSDRLFTELLAKANEVKNQLPQDAEDPVLSKEAADASALmyISFYSEEMSNPQITDYLSRVIQPKLATLPGMAEAE 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 175 LAGAPTKIVRVIPQQEKLTASGLTVSDVENAIKNAGSSLPGGTVTRGNQALDVTIGKDFSSLDQLRTLMVtpsapaatpp 254
Cdd:PRK09579 176 ILGNQVFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVKGEYVVTSINASTELKSAEAFAAIPV---------- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 255 pkagraqtlsrNTVQRKPVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKEVSQKLDDLLPTVGGNA 334
Cdd:PRK09579 246 -----------KTSGDSRVLLGDVARVEMGAENYDSISSFDGIPSVYIGIKATPSANPLDVIKEVRAIMPELESQLPPNL 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 335 HSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALTIS 414
Cdd:PRK09579 315 KVSIAYDATLFIQASIDEVVKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTLLAMVLA 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 415 IGRVVDDSIVVIENIKRHLTYGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFSLTVAIAMLSSL 494
Cdd:PRK09579 395 IGLVVDDAIVVVENIHRHIEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISG 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 495 FVSLTIVPVLAFWFLKgnYGKDPRETAAIRDRAEQReersiLHRLYSPVLRVTQAHRIVtILVSIAIVVGTGFLFPLMTL 574
Cdd:PRK09579 475 IVALTLSPMMCALLLR--HEENPSGLAHRLDRLFER-----LKQRYQRALHGTLNTRPV-VLVFAVIVLALIPVLLKFTQ 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 575 NFLG-DSGQNLASFSQTLPNGTSLKESSEKAAEAEK---------ALLGIDGVTTVQTTIGAgqfstggqpneitYAITT 644
Cdd:PRK09579 547 SELApEEDQGIIFMMSSSPQPANLDYLNAYTDEFTPifksfpeyySSFQINGFNGVQSGIGG-------------FLLKP 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 645 KDDAD--QEALRHRIDDTLKSLPDHGDISMQASGGPGGASTVNIDITGPTAtarRDANDLI-----MDQLANPPASVSQV 717
Cdd:PRK09579 614 WNERErtQMELLPLVQAKLEEIPGLQIFGFNLPSLPGTGEGLPFQFVINTA---NDYESLLqvaqrVKQRAQESGKFAFL 690
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 718 TSDLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKVSLDGTDTDIYV----AGDTKPVTLNDLTKLSIAG 793
Cdd:PRK09579 691 DIDLAFDKPEVVVDIDRAKAAQMGVSMQDLGGTLATLLGEGEINRFTIDGRSYKVIAqverPYRDNPGWLNNYYVKNEQG 770
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 794 --VPLTDLATIEERNVVPELSTKNTQATVTIALTP---AGQDVGAVMKVAQDsidavKLPDGARASVGGAADDISQTFGQ 868
Cdd:PRK09579 771 qlLPLSTLITLSDRARPRQLNQFQQLNSAIISGFPivsMGEAIETVQQIARE-----EAPEGFAFDYAGASRQYVQEGSA 845
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 869 IGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLVDLVNQY 948
Cdd:PRK09579 846 LWVTFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQL 925
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 949 RRD-GMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFISKPLAVVVIGGL 1007
Cdd:PRK09579 926 RHEqGLSRREAIEEAAAIRLRPVLMTTAAMVFGMVPLILA-TGAGAVSRFDIGLVIATGM 984
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
4-1010 |
1.39e-71 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 260.53 E-value: 1.39e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 4 LANVSLKNRSFIALVCVVVSILGAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSS 83
Cdd:PRK10555 1 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 84 -TSRSGVSMVTVELTYGTDVARSANKVDAAIGRLKDRLPEGVDPQ---VIAGGASEIpALVTAVSSDS--DQGQLADRLR 157
Cdd:PRK10555 81 qSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQgvtVRKTGDTNI-LTIAFVSTDGsmDKQDIADYVA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 158 TTVVPALEKLDGVSSVVLAGAPTKIvRVIPQQEKLTASGLTVSDVENAIKNAGSSLP----GGTVTRGNQALDVTIgkdf 233
Cdd:PRK10555 160 SNIQDPLSRVNGVGDIDAYGSQYSM-RIWLDPAKLNSFQMTTKDVTDAIESQNAQIAvgqlGGTPSVDKQALNATI---- 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 234 SSLDQLRTlmvtpsapaatppPKAGRAQTLsRNTVQRKPVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVV 313
Cdd:PRK10555 235 NAQSLLQT-------------PEQFRDITL-RVNQDGSEVTLGDVATVELGAEKYDYLSRFNGKPASGLGVKLASGANEM 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 314 DVSKEVSQKLDDLLPTVGGNAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAF 393
Cdd:PRK10555 301 ATAKLVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTF 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 394 LGMLVFGYTLNMLTLAALTISIGRVVDDSIVVIENIKRHLT-YGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVT 472
Cdd:PRK10555 381 SVLYAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIMSeEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFG 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 473 GMAGELFRPFSLTVAIAMLSSLFVSLTIVPVLAFWFLK-----------GNYGKDPRetaaIRDRAEQREERSILHRLys 541
Cdd:PRK10555 461 GTTGAIYRQFSITIVSAMVLSVLVAMILTPALCATLLKplkkgehhgqkGFFGWFNR----MFNRNAERYEKGVAKIL-- 534
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 542 pvlrvtqAHRIVTILVSIAIVVGTGFLFPLMTLNFLGDSGQNLASFSQTLPNGTSLKESSEKAAEAEKALLG--IDGVTT 619
Cdd:PRK10555 535 -------HRSLRWILIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEKVEKYYFTheKDNVMS 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 620 VQTTIGAGqfsTGGQPNEITYAITTKDDADQE--------ALRHRIDDTLKSLPDHGDI--SMQASGGPGGASTVNI--- 686
Cdd:PRK10555 608 VFATVGSG---PGGNGQNVARMFIRLKDWDERdsktgtsfAIIERATKAFNKIKEARVIasSPPAISGLGSSAGFDMelq 684
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 687 DITGPTATARRDANDLIMDQLANPPaSVSQVTSDLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKVSLD 766
Cdd:PRK10555 685 DHAGAGHDALMAARNQLLALAAKNP-ELTRVRHNGLDDSPQLQIDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDR 763
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 767 GTDTDIYVAGDTKPVTL-NDLTKLSI-----AGVPLTDLATIEERNVVPELSTKNTQATVTIALTPA-GQDVGAVMKVAQ 839
Cdd:PRK10555 764 GRVKKVYVQAAAPYRMLpDDINLWYVrnkdgGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAApGVSTGTAMDIME 843
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 840 DSIDavKLPDGARASVGGAADDISQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAfgllVLTNTPL 919
Cdd:PRK10555 844 SLVK--QLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGA----LLATWMR 917
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 920 GLPS----MIGLLMLIGIVVTNAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFI 995
Cdd:PRK10555 918 GLENdvyfQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHASRQRLRPILMTSLAFIFGVLPMATS-TGAGSGS 996
|
1050
....*....|....*
gi 960339101 996 SKPLAVVVIGGLVSS 1010
Cdd:PRK10555 997 QHAVGTGVMGGMISA 1011
|
|
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
38-1042 |
7.90e-71 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 258.51 E-value: 7.90e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 38 IPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSSTSRSGVSMVTV--ELTYGTDVARsaNKVDAAIGR 115
Cdd:PRK10503 46 LPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITLqfQLTLPLDVAE--QEVQAAINA 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 116 LKDRLPEGV-DPQVIAG-GASEIPALVTAVSSDS-DQGQLADRLRTTVVPALEKLDGVSSVVLAGAPTKIVRVIPQQEKL 192
Cdd:PRK10503 124 ATNLLPSDLpNPPVYSKvNPADPPIMTLAVTSTAmPMTQVEDMVETRVAQKISQVSGVGLVTLSGGQRPAVRVKLNAQAI 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 193 TASGLTVSDVENAIKNAGSSLPGGTVTRGNQALDVTIGKDFSSLDQLRTLMVTPSAPAatpppkagraqtlsrntvqrkP 272
Cdd:PRK10503 204 AALGLTSETVRTAITGANVNSAKGSLDGPTRAVTLSANDQMQSAEEYRQLIIAYQNGA---------------------P 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 273 VQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKEVSQKLDDLLPTVGGNAHSDVVFDQAPFIRQSIDS 352
Cdd:PRK10503 263 IRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDD 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 353 LATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSIVVIENIKRH 432
Cdd:PRK10503 343 TQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRY 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 433 LTYGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFSLTVAIAMLSSLFVSLTIVPVLAFWFLKgn 512
Cdd:PRK10503 423 IEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAILISAVVSLTLTPMMCARMLS-- 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 513 ygkdpRETAAIRDRAEQREERsILHRL---YSPVLRVTQAHRIVTILVSIAIVVGTGFLFPLMTLNFLGDSGQNLASFSQ 589
Cdd:PRK10503 501 -----QESLRKQNRFSRASER-MFDRViaaYGRGLAKVLNHPWLTLSVALSTLLLTVLLWIFIPKGFFPVQDNGIIQGTL 574
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 590 TLPNGTSLKESSEKAAEAEKALLGIDGVTTVQTTIGAgqfsTGGQP--NEITYAITTKDDADQealRHRIDDTLKSLpdh 667
Cdd:PRK10503 575 QAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGV----DGTNPslNSARLQINLKPLDER---DDRVQKVIARL--- 644
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 668 gdiSMQASGGPGGASTVNI--DITGPTATARR------DANDL---------IMDQLANPPAsVSQVTSDLTADQPAVVI 730
Cdd:PRK10503 645 ---QTAVAKVPGVDLYLQPtqDLTIDTQVSRTqyqftlQATSLdalstwvpkLMEKLQQLPQ-LSDVSSDWQDKGLVAYV 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 731 SVKSKEAAARGLTESAIVGLVAQELNPSSIGKVSLDGTDTDIYVAGDTKPVT----LND--LTKLSIAGVPLTDLATIEE 804
Cdd:PRK10503 721 NVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPglaaLDTirLTSSDGGVVPLSSIATIEQ 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 805 RNVVPELSTKNTQATVTIAL-TPAGQDVGAVMKVAQDSIDAVKLPDGARASVGGAADDISQTFGQIGIAILAAILLVYVL 883
Cdd:PRK10503 801 RFGPLSINHLDQFPSTTISFnVPDGYSLGDAVQAIMDTEKTLNLPADITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIV 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 884 LVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLVDLVNQYRRD-GMPLDEAIRSG 962
Cdd:PRK10503 881 LGVLYESFIHPITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREqGMSPRDAIYQA 960
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 963 ARRRLRPILMTAAATIFALLPMALGiTGYSAFISKPLAVVVIGGLVSSTLLTLVLVPVLYRMVEGPGEKRRLRREAEQAE 1042
Cdd:PRK10503 961 CLLRFRPILMTTLAALLGALPLMLS-TGVGAELRRPLGICMVGGLIVSQVLTLFTTPVIYLLFDRLALYTKSRFPRHEEE 1039
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
11-1010 |
1.76e-63 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 235.90 E-value: 1.76e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 11 NRSFIALVCVVVSIL-GAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSSTSRSGV 89
Cdd:PRK09577 7 DRPVFAWVISLFIMLgGIFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSATSSAGQ 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 90 SMVTVELTYGTDVARSANKVDAAIGRLKDRLPEGV--DPQVIAGGASEIPALVTAVSSDS--DQGQLADRLRTTVVPALE 165
Cdd:PRK09577 87 ASLSLTFKQGVNADLAAVEVQNRLKTVEARLPEPVrrDGIQVEKAADNIQLIVSLTSDDGrlTGVELGEYASANVLQALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 166 KLDGVSSVVLAGaPTKIVRVIPQQEKLTASGLTVSDVENAIKNAGSSLPGGTVTRGNQALDVTIGKDFSSLDQLRTlmvt 245
Cdd:PRK09577 167 RVEGVGKVQFWG-AEYAMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIGRSAVPDSAPIAATVFADAPLKT---- 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 246 psapaatpPPKAGRAQTlsRNTVQRKPVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKEVSQKLDD 325
Cdd:PRK09577 242 --------PEDFGAIAL--RARADGSALYLRDVARIEFGGNDYNYPSYVNGKTATGMGIKLAPGSNAVATEKRVRATMDE 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 326 LLPTVGGNAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLVFGYTLNM 405
Cdd:PRK09577 312 LSRYFPPGVKYQIPYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAAGFSINV 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 406 LTLAALTISIGRVVDDSIVVIENIKRHLTY-GEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFSL 484
Cdd:PRK09577 392 LTMFGMVLAIGILVDDAIVVVENVERLMVEeGLSPYDATVKAMKQISGAIVGITVVLTSVFVPMAFFGGAVGNIYRQFAL 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 485 TVAIAMLSSLFVSLTIVPVLAFWFLKgnygkdpretAAIRDRAEQREERSILHRLyspVLRVTQ--AHRIVTIL------ 556
Cdd:PRK09577 472 SLAVSIGFSAFLALSLTPALCATLLK----------PVDGDHHEKRGFFGWFNRF---VARSTQryATRVGAILkrplrw 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 557 --VSIAIVVGTGFLFPLMTLNFLGDSGQNLASFSQTLPNGTSLKESSEKAAEAEKALLGIDGVTTVQTTIGAGQFSTGgq 634
Cdd:PRK09577 539 lvVYGALTAAAALLFTRLPTAFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYLRRHEPVAYTFALGGFNLYGEG-- 616
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 635 PNEITYAITTKD-----DADQ--EALRHRIDDTLKSLPDHGDISMQASGGPGGASTVNIDIT-----GPTATARRDANDL 702
Cdd:PRK09577 617 PNGGMIFVTLKDwkerkAARDhvQAIVARINERFAGTPNTTVFAMNSPALPDLGSTSGFDFRlqdrgGLGYAAFVAAREQ 696
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 703 IMDQLANPPAsVSQVTSDLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKVsLDGTDTD--IYVAGDTKP 780
Cdd:PRK09577 697 LLAEGAKDPA-LTDLMFAGTQDAPQLKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDF-MHGSQVRrvIVQADGRHR 774
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 781 VTLNDLTKLSIAG-----VPLTDLATIEERNVVPELSTKNTQATVTIALTPA-GQDVGAVMKvAQDSIdAVKLPDGARAS 854
Cdd:PRK09577 775 LDPDDVKKLRVRNaqgemVPLAAFATLHWTLGPPQLTRYNGYPSFTINGSAApGHSSGEAMA-AIERI-AATLPAGIGYA 852
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 855 VGGAADDISQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIV 934
Cdd:PRK09577 853 WSGQSFEERLSGAQAPMLFALSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLIATIGLS 932
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 960339101 935 VTNAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFISKPLAVVVIGGLVSS 1010
Cdd:PRK09577 933 AKNAILIVEVAKDLVAQRMSLADAALEAARLRLRPIVMTSLAFGVGVLPLAFA-SGAASGAQIAIGTGVLGGVITA 1007
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
14-1044 |
7.86e-60 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 224.78 E-value: 7.86e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 14 FIALVCVVVSILGAYAMTTLRQELIPSLDLPQIRIVTSQSGASAEQIEQKISAPIEQAVRGLENVDSTSSTS-RSGVSMV 92
Cdd:PRK15127 11 FAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSdSTGTVQI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 93 TVELTYGTDVARSANKVDAAIGRLKDRLPEGVDPQVIAGGASEIPALVTA--VSSDS--DQGQLADRLRTTVVPALEKLD 168
Cdd:PRK15127 91 TLTFESGTDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVgvINTDGtmTQEDISDYVAANMKDPISRTS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 169 GVSSVVLAGAPTKIvRVIPQQEKLTASGLTVSDVENAIKNAGSSLP----GGTVTRGNQALDVTIgkdfssLDQLRtlmv 244
Cdd:PRK15127 171 GVGDVQLFGSQYAM-RIWMNPNELNKFQLTPVDVINAIKAQNAQVAagqlGGTPPVKGQQLNASI------IAQTR---- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 245 tpsapaatPPPKAGRAQTLSRNTVQRKPVQLSSVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKEVSQKLD 324
Cdd:PRK15127 240 --------LTSTEEFGKILLKVNQDGSRVRLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELA 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 325 DLLPTVGGNAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLVFGYTLN 404
Cdd:PRK15127 312 KMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSIN 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 405 MLTLAALTISIGRVVDDSIVVIENIKRHLTY-GEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFS 483
Cdd:PRK15127 392 TLTMFGMVLAIGLLVDDAIVVVENVERVMAEeGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFS 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 484 LTVAIAMLSSLFVSLTIVPVLAFWFLK----GNYGKDPRETAAIRDRAEqreERSILHRLYS--PVLRVTQAHrivtILV 557
Cdd:PRK15127 472 ITIVSAMALSVLVALILTPALCATMLKpiakGDHGEGKKGFFGWFNRMF---EKSTHHYTDSvgNILRSTGRY----LVL 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 558 SIAIVVGTGFLFPLMTLNFLGDSGQNLASFSQTLPNGTSLKESSEKAAEAEKALLGI--DGVTTVQTTIGAGqFSTGGQP 635
Cdd:PRK15127 545 YLIIVVGMAYLFVRLPSSFLPDEDQGVFLTMVQLPAGATQERTQKVLNEVTDYYLTKekNNVESVFAVNGFG-FAGRGQN 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 636 NEITYaITTKDDADQ-------EALRHRIDDTLKSLPDHGDISMQAS-----GGPGGASTVNIDITGPTATARRDANDLI 703
Cdd:PRK15127 624 TGIAF-VSLKDWADRpgeenkvEAITMRATRAFSQIKDAMVFAFNLPaivelGTATGFDFELIDQAGLGHEKLTQARNQL 702
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 704 MDQLANPPASVSQVTSDLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGKVSLDGTDTDIYVAGDTKPVTL 783
Cdd:PRK15127 703 LGEAAKHPDMLVGVRPNGLEDTPQFKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRML 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 784 -NDLTKLSIAG-----VPLTDLATIEERNVVPELSTKNTQATVTIALTPA-GQDVGAVMKVAQDSidAVKLPDGARASVG 856
Cdd:PRK15127 783 pDDIGDWYVRAadgqmVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAApGKSTGEAMELMEEL--ASKLPTGVGYDWT 860
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 857 GAADDISQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAfgllVLTNTPLGLPS----MIGLLMLIG 932
Cdd:PRK15127 861 GMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGA----LLAATFRGLTNdvyfQVGLLTTIG 936
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 933 IVVTNAIVLVDLVNQ-YRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGiTGYSAFISKPLAVVVIGGLVSST 1011
Cdd:PRK15127 937 LSAKNAILIVEFAKDlMDKEGKGLIEATLEAVRMRLRPILMTSLAFILGVMPLVIS-SGAGSGAQNAVGTGVMGGMVTAT 1015
|
1050 1060 1070
....*....|....*....|....*....|...
gi 960339101 1012 LLTLVLVPVLYRMVegpgeKRRLRREAEQAERD 1044
Cdd:PRK15127 1016 VLAIFFVPVFFVVV-----RRRFSRKNEDIEHS 1043
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
295-986 |
1.30e-29 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 127.28 E-value: 1.30e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 295 NGRESLVLVVTAEANGNVVDVSKEVSQKLDDLLPTVGGNAHSDVVFDQAPFIRQSIDSLATEGLLGLGFAIVVILLFLL- 373
Cdd:COG1033 158 DGKATLIVVTLDPDPLSSDLDRKEVVAEIRAIIAKYEDPGVEVYLTGFPVLRGDIAEAIQSDLAIFFPLALLLILLLLFl 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 374 ---SVRSTLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSIVVIENIKRHLTYGEPKMQAVVAAVKEV 450
Cdd:COG1033 238 ffrSLRGVLLPLLVVLLAVIWTLGLMGLLGIPLSPLTILVPPLLLAIGIDYGIHLLNRYREERRKGLDKREALREALRKL 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 451 AGAVTSSTLATVIVFLPIAVvtgMAGELFRPFSLTVAIAMLSSLFVSLTIVPVLAFWFLKGnygkdpretaaiRDRAEQR 530
Cdd:COG1033 318 GPPVLLTSLTTAIGFLSLLF---SDIPPIRDFGIVAAIGVLLAFLTSLTLLPALLSLLPRP------------KPKTRRL 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 531 EERSILHRLYSPVLRVTQAHRIVTILVSIAIVVGTGFLFPLMTLNFlgdsgqnlaSFSQTLPNGTSLKESSEKaaeaeka 610
Cdd:COG1033 383 KKPPELGRLLAKLARFVLRRPKVILVVALVLAVVSLYGISRLKVEY---------DFEDYLPEDSPIRQDLDF------- 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 611 llgidgvttvqttigagqfstggqpneityaittkddadqealrhrIDDTLkslpdhgdismqasggpGGASTVNIDITG 690
Cdd:COG1033 447 ----------------------------------------------IEENF-----------------GGSDPLEVVVDT 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 691 PTATARRDANDL-IMDQLANPPASVSQVTSdltadqpavVISVkskeaaarglteSAIVGLVAQELNpssigkvsldGTD 769
Cdd:COG1033 464 GEPDGLKDPEVLkEIDRLQDYLESLPEVGK---------VLSL------------ADLVKELNQALN----------EGD 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 770 TDIYVAGDTKPVTLNDLTKLSIAGVPLTDlatieernvvPELSTKNTQATVTIALTPAGQD-VGAVMKVAQDSIDAVKLP 848
Cdd:COG1033 513 PKYYALPESRELLAQLLLLLSSPPGDDLS----------RFVDEDYSAARVTVRLKDLDSEeIKALVEEVRAFLAENFPP 582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 849 DGARASVGGAA---DDISQTF--GQIgIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPS 923
Cdd:COG1033 583 DGVEVTLTGSAvlfAAINESVieSQI-RSLLLALLLIFLLLLLAFRSLRLGLISLIPNLLPILLTFGLMGLLGIPLNIAT 661
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 960339101 924 MIGLLMLIGIVVTNAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMAL 986
Cdd:COG1033 662 AVVASIALGIGVDYTIHFLSRYREERRKGGDLEEAIRRALRTTGKAILFTSLTLAAGFGVLLF 724
|
|
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
550-1015 |
3.43e-21 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 100.56 E-value: 3.43e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 550 HRIVTILVSIAIVVGTGFLFPLMTLNFLGDSGQNLASFSQTLPnGTSLKESSEKAAEA-EKALLGIDGVTTVQTTIGAGQ 628
Cdd:COG0841 10 RPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYP-GASPEEVESTVTTPiEEALNGVEGIKYITSTSSEGS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 629 FSTggqpnEITYAITTKDDADQEALRHRIDDTLKSLPDhgDIS------MQASGGPggasTVNIDITGPTATAR--RD-A 699
Cdd:COG0841 89 SSI-----TVEFELGTDIDEALVDVQNAVDRARSDLPE--DVEppgvtkVNPSDFP----VMVLALSSDDLDELelSDyA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 700 NDLIMDQLANPPAsVSQVTSdLTADQPAVVISVKSKEAAARGLTESAIVGLVAQELNPSSIGkvSLDGTDTDIYVAGDTK 779
Cdd:COG0841 158 ERNIKDRLERVPG-VGQVQI-FGGREREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAG--RIGGGDREYTVRTNGR 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 780 PVTLNDLTKLSIAG-----VPLTDLATIEERNVVPELSTK-NTQATVTIALTPA-GQDVGAVMKVAQDSIDAVK--LPDG 850
Cdd:COG0841 234 LKTPEEFENIVIRTndgsvVRLGDVARVEDGAEDYRSIARlNGKPAVGLAIQKQpGANALEVADAVRAKLEELQasLPEG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 851 ARASVGG-AADDISQTFGQIGIAILAAILLVyVLLVWIF-KSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLL 928
Cdd:COG0841 314 VELTIVYdQSEFIRASIEEVVKTLLEAILLV-VLVVFLFlRSWRATLIPAVAIPVSLIGTFAVMYLLGFSLNILTLFALV 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 929 MLIGIVVTNAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMAL--GITGYsafISKPLAVVVIGG 1006
Cdd:COG0841 393 LAIGIVVDDAIVVVENIERHMEEGLSPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFmgGITGQ---LFRQFALTVAIA 469
|
....*....
gi 960339101 1007 LVSSTLLTL 1015
Cdd:COG0841 470 LLISLFVAL 478
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
294-508 |
1.96e-13 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 75.28 E-value: 1.96e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 294 TNGRESLVLVVTAEANGN-VVDVSKEVSQKLDDLLPTVGGNAH---SDVVFDQApfirqsIDSLATEGLLGLGFAIVVIL 369
Cdd:COG1033 546 EDYSAARVTVRLKDLDSEeIKALVEEVRAFLAENFPPDGVEVTltgSAVLFAAI------NESVIESQIRSLLLALLLIF 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 370 LFLL----SVRSTLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSIVVIENIKRHLTYGEPKMQAVVA 445
Cdd:COG1033 620 LLLLlafrSLRLGLISLIPNLLPILLTFGLMGLLGIPLNIATAVVASIALGIGVDYTIHFLSRYREERRKGGDLEEAIRR 699
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 960339101 446 AVKEVAGAVTSSTLATVIVFLP--IAVVTGMAGelfrpFSLTVAIAMLSSLFVSLTIVPVLAFWF 508
Cdd:COG1033 700 ALRTTGKAILFTSLTLAAGFGVllFSSFPPLAD-----FGLLLALGLLVALLAALLLLPALLLLL 759
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
6-508 |
2.98e-13 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 74.68 E-value: 2.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 6 NVSLKNRSFIALVCVVVSILGAYAMTTLRQELIPSLD----LPQIRIVTSQSGASAEQIEQKisapIEQAVRGLENVDST 81
Cdd:COG3696 523 RWALRHPKLVLAVALVLLVLALALFPRLGSEFLPELDegdlLVMATLPPGISLEESVELGQQ----VERILKSFPEVESV 598
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 82 SS-TSRS-------GVSM--VTVEL------TYGTDVARSANKVDAAIgrlkDRLPeGVDP---QVIAGGASEipaLVTA 142
Cdd:COG3696 599 VSrTGRAedatdpmGVNMseTFVILkprsewRSGRTKEELIAEMREAL----EQIP-GVNFnfsQPIQMRVDE---LLSG 670
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 143 VSSD-------SDQGQLaDRLRTTVVPALEKLDGVSSVVL---AGAPTkiVRVIPQQEKLTASGLTVSDVENAIKNAGSS 212
Cdd:COG3696 671 VRADvavkifgDDLDVL-RRLAEQIEAVLKTVPGAADVQVervTGLPQ--LDIRIDRDAAARYGLNVADVQDVVETAIGG 747
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 213 LPGGTVTRGNQALDVTI--GKDF-SSLDQLRTLMVTpsapaatpppkagraqtlsrnTVQRKPVQLSSVASVEHVEKdAT 289
Cdd:COG3696 748 KAVGQVYEGERRFDIVVrlPEELrDDPEAIRNLPIP---------------------TPSGAQVPLSQVADIEVVEG-PN 805
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 290 SISRTNGResLVLVVTAEANG-NVVDVSKEVSQKLDDLLP-------TVGGnahsdvvfdQAPFIRQSIDSLATegLLGL 361
Cdd:COG3696 806 QISRENGR--RRIVVQANVRGrDLGSFVAEAQAKVAEQVKlppgyyiEWGG---------QFENLQRATARLAI--VVPL 872
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 362 GFAIVVILLFLL--SVRSTLVTAISIPLSVLMAFLGMLVFGYTLN------MLTLAaltisiGRVVDDSIVVIENIKRHL 433
Cdd:COG3696 873 ALLLIFLLLYLAfgSVRDALLILLNVPFALIGGVLALWLRGMPLSvsagvgFIALF------GVAVLNGVVLVSYINQLR 946
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 960339101 434 TYGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFSlTVAIA-MLSSLFVSLTIVPVLAFWF 508
Cdd:COG3696 947 AEGLDLREAIIEGALERLRPVLMTALVAALGLLPMALSTGPGSEVQRPLA-TVVIGgLITSTLLTLLVLPALYLLF 1021
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
549-1015 |
2.09e-12 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 71.94 E-value: 2.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 549 AHRIVTILVSIAIVVGTGFLFPLMTLNFLGDSGQNLASFSQTLPnGTSLKESSEKAAEA-EKALLGIDGVTTVQTTIGAG 627
Cdd:pfam00873 7 RRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYP-GASPEEVEDTVTQPiEQAMNGLDGLKYMSSQSSYG 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 628 ------QFSTGGQP----NEITYAIT-TKDDADQEALRHRIDdtlKSLPDHGDISMQASGGPGGASTvNIDItgptataR 696
Cdd:pfam00873 86 lssitlTFELGTDIdiarQDVQNRLQlATPLLPEGVQRPGIS---VIKTSLGPIMVLAVTSPDGSYT-QTDL-------R 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 697 RDANDLIMDQLANPPAsVSQVTSdLTADQPAVVISVKSKEAAARGLTESAIVGlvAQELNPSSIGKVSLDGTDTDIYVAG 776
Cdd:pfam00873 155 DYADTNIKPQLSRVPG-VGDVQL-FGGSEYAMRIWLDPQKLARYGLTLTDVVS--ALKEQNVNIGAGQLEGQGLQALIRA 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 777 DTKPVTLNDLTKLSIAG-----VPLTDLATI----EERNVVpelSTKNTQATVtialtpagqdVGAVMKV----AQDSID 843
Cdd:pfam00873 231 QGQLQSAEDFEKIIVKNqdgspVRLRDVATVelgsELYRGF---ATFNGKPAV----------GLGVQKLpganAIETAD 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 844 AVK---------LPDGARAS--------VGGAADDISQTfgqIGIAILAAILLVYVLLvwifKSLVQPLILLVSIPFAAT 906
Cdd:pfam00873 298 AVRaklaelkptFPQGVEIVvvydttpfIRASIEEVVKT---LLEAIVLVILVMFLFL----QNWRATLIPAIAIPLSLL 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 907 GAFGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLVDlvNQYRR---DGMPLDEAIRSGARRRLRPILMTAAATIFALLP 983
Cdd:pfam00873 371 GTFAVMKAFGFSINTLTLGGLVLAIGLVVDDAIVVVE--NIERVleeNGLKPLEAAYKSMGEIGGALVAIALVLSAVFLP 448
|
490 500 510
....*....|....*....|....*....|..
gi 960339101 984 MALgITGYSAFISKPLAVVVIGGLVSSTLLTL 1015
Cdd:pfam00873 449 ILF-LGGLTGRIFRQFAITIVLAILLSVLVAL 479
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
809-1008 |
6.04e-10 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 63.63 E-value: 6.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 809 PELSTKNTQATVTIALTpagqdvGAVMKVAQDSIDAVK------LPDGARASVGGAA---DDISQTFGQI-GIAILAAIL 878
Cdd:COG2409 107 GLVSEDGKAALVTVTLD------GDAGDEAAEAVDALRdavaaaPAPGLTVYVTGPAalaADLNEAFEEDlGRAELITLP 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 879 LVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSM-IGLLMLIGI-VVTNAIVLvdLVNQYR---RDGM 953
Cdd:COG2409 181 VALVVLLLVFRSLVAALLPLLTAGLAVGVALGLLALLAAFTDVSSFaPNLLTMLGLgVGIDYALF--LVSRYReelRAGE 258
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 960339101 954 PLDEAIRSGARRRLRPILMTAAATIFALLpmALGITGYSAFISkpLAVVVIGGLV 1008
Cdd:COG2409 259 DREEAVARAVATAGRAVLFSGLTVAIALL--GLLLAGLPFLRS--MGPAAAIGVA 309
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
784-988 |
6.86e-10 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 63.70 E-value: 6.86e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 784 NDLTKLSIAgvpLTDLATIEERNVVPelstKNTQATVTIALTPAgQDVGAVMKVAQD---SIDAVKLPDGARASVGGAAD 860
Cdd:TIGR00921 111 VTMPEVRPL---MSEYPRSKEMFLSK----DHTVAIIIVQLKSD-ADYKQVVPIYNDverSLERTNPPSGKFLDVTGSPA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 861 ---DISQTFGQ-IGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVT 936
Cdd:TIGR00921 183 inyDIEREFGKdMGTTMAISGILVVLVLLLDFKRWWRPLLPLVIILFGVAWVLGIMGWLGIPLYATTLLAVPMLIGVGID 262
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 960339101 937 NAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGI 988
Cdd:TIGR00921 263 YGIQTLNRYEEERDIGRAKGEAIVTAVRRTGRAVLIALLTTSAGFAALALSE 314
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
348-692 |
7.02e-10 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 63.71 E-value: 7.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 348 QSIDSLATEGLLGlgFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSIVVIE 427
Cdd:PRK13024 263 DAIDAGIIAGIIG--FALIFLFMLVYYGLPGLIANIALLLYIFLTLGALSSLGAVLTLPGIAGLVLGIGMAVDANVLIFE 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 428 NIKRHLTYGEPKMQAVVAAVKEVAGAVTSSTLATVIvflpiavvtgMAGELF-------RPFSLTVAIAMLSSLFVSLTI 500
Cdd:PRK13024 341 RIKEELRKGKSLKKAFKKGFKNAFSTILDSNITTLI----------AAAILFffgtgpvKGFATTLIIGILASLFTAVFL 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 501 VPVLAFWFLKGNYGKDPreTAAIRdraeqreeRSILHRLYSPVLRVTQ----AHRIVTILVSIAIVVGTGFLFPLMTLNF 576
Cdd:PRK13024 411 TRLLLELLVKRGDKKPF--LFGVK--------KKKIHNINEGVTIFDRidfvKKRKWFLIFSIVLVIAGIIIFFIFGLNL 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 577 LGDsgqnlasFSqtlpNGTSLKESSEKAAEAEK-----ALLGIDGVTTVqtTIGagqfSTGGQPNEITYAITTKDDADQE 651
Cdd:PRK13024 481 GID-------FT----GGTRYEIRTDQPVDLEQvradlKELGLGEVNIV--TFG----SDNNQVLVRTYGILSDDEEADT 543
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 960339101 652 ALRHRIDDTLKSLpdhgdismqasggpGGASTVNIDITGPT 692
Cdd:PRK13024 544 EIVAKLKNALKND--------------KGGTIPSSETVGPT 570
|
|
| 2A0604s01 |
TIGR00916 |
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY ... |
342-498 |
2.72e-08 |
|
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY proteins form the protein translocation appartus in prokaryotes. This family is specific for the SecD and SecF proteins. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273336 [Multi-domain] Cd Length: 192 Bit Score: 55.34 E-value: 2.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 342 QAPFIRQSIDSLATE----GLLGLGFAIVVILLFLLsVR---STLVTAISIPLSVLMAFLGML-VFGYTLNMLTLAALTI 413
Cdd:TIGR00916 30 SAPVVGTVGPTLGGElikaGIIALLIGLVLVLLYML-LRyewRGAIAAIAALVHDVILILGVLsLFGATLTLPGIAGLLT 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 414 SIGRVVDDSIVVIENIKRHLTyGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFSLTVAIAMLSS 493
Cdd:TIGR00916 109 IIGYSVDDTVVIFDRIREELR-KYKGRTFREAINLGINQTLSRIIDTNVTTLLAVLALYVFGGGAIKGFALTLGIGVIAG 187
|
....*
gi 960339101 494 LFVSL 498
Cdd:TIGR00916 188 TYSSI 192
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
710-996 |
5.83e-08 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 57.31 E-value: 5.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 710 PPASVSQVTSDLTADQPavVISVKSKEAAARGLT---ESAIVGLVAQELNPSSIGKVsLDGTDTDIYVAGDTKPvtlndl 786
Cdd:TIGR03480 120 PLEDLEKLTDRLASAQP--FLGRLAADPSLRGLFtalTLALQGLKAGQAQLPGLAPI-LDALAEALRAFLEGKP------ 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 787 TKLSIAGVPLTDLATIEERN----VVPELSTKntqatvtiALTPAGQDVGAVMKVAQD-SIDAVKlpdGARASVGGAA-- 859
Cdd:TIGR03480 191 APFSWQALMSGKDAALAPRRrfiiVQPVLDYS--------SLEPAEKAINAIRAAAKDlRLDEDH---GVTVRLTGEVal 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 860 --DDISQTFGQIGIAILAAILLVYVLLVWIFKS--LVQPLILLVSIPFAATGAFGLLVLTntPLGLPSMIGLLMLIGIVV 935
Cdd:TIGR03480 260 sdEELATVSEGATVAGLLSFVLVLVLLWLALRSprLVFAVLVTLIVGLILTAAFATLAVG--HLNLISVAFAVLFIGLGV 337
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 960339101 936 TNAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAAT---IFALLPMA------LG-ITGYSAFIS 996
Cdd:TIGR03480 338 DFAIQFSLRYREERFRGGNHREALSVAARRMGAALLLAALATaagFFAFLPTDykgvseLGiIAGTGMFIA 408
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
775-980 |
1.02e-07 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 56.31 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 775 AGDTKPVTLNDLTKLS--IAGVPLTDLATIeernVVPELSTKNTQATVTIALTPAGQDVGAVMKVAQDSIDAVKLPDGAR 852
Cdd:COG2409 423 DDDLDPADLAALDALAaaLAAVPGVASVQP----PTRPEGTDGDAARLQVVPDGDPDSPEAIDLVDRLRDAAAPALEGAE 498
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 853 ASVGGAA----DDISQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVL----TNTPLGL--P 922
Cdd:COG2409 499 VLVGGTTavniDISDALADDLPLVIPVVLGLIFLLLLLLFRSVVAPLKAVLTNLLSLGAALGVLVLvfqhGWLLLGFtpG 578
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 960339101 923 SMIGLLMLIGIVVTNA------IVLVDLVNQYRRDGMPLDEAIRSGARRRLRPIlmTAAATIFA 980
Cdd:COG2409 579 PLDSFVPLLLFVILFGlgmdyeVFLVSRIREEYDRGGGTREAVIRGLARTGRVI--TSAALIMA 640
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
838-1009 |
1.64e-07 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 54.99 E-value: 1.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 838 AQDSIDAVK-------LPDGARASVGGAA---DDISQTF-GQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAAT 906
Cdd:pfam03176 102 ADESVAAVRdaveqapPPEGLKAYLTGPAatvADLRDAGdRDLGLIEAVTLVVIFIILLIVYRSVVAALLPLLTVGLSLG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 907 GAFGLLVLTNTPLGLP---SMIGLLMLIGIVVTN--AIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFAL 981
Cdd:pfam03176 182 AAQGLVAILAHILGIGlstFALNLLVVLLIAVGTdyALFLVSRYREELRAGEDREEAVIRAVRGTGKVVTAAGLTVAIAM 261
|
170 180
....*....|....*....|....*....
gi 960339101 982 LPMALGITGYSAFISKPLAV-VVIGGLVS 1009
Cdd:pfam03176 262 LALSFARLPVFAQVGPTIAIgVLVDVLAA 290
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
1096-1264 |
1.68e-07 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 54.96 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1096 ARGTATGQGGVAVQSGATGRGGASSRNAVTGRHAALSRDVVmsgrdAMPGGGAVSGRDAASGRDAGSGRHAVPGRRAAMG 1175
Cdd:PTZ00436 193 AAAAAAAKQKAAAKKAAAPSGKKSAKAAAPAKAAAAPAKAA-----APPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1176 AAVHASSGTATAGSANTSIRSANTSVRPANSSMGSATAPMRSATAPMRSATAPMRSATAPGHSANYAARPVNGPVRSAKG 1255
Cdd:PTZ00436 268 AAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAA 347
|
....*....
gi 960339101 1256 QVPRSRGAR 1264
Cdd:PTZ00436 348 PVGKKAGGK 356
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
846-1009 |
8.80e-07 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 53.68 E-value: 8.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 846 KLPDGARASVG-GAADDISQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSM 924
Cdd:PRK09579 309 QLPPNLKVSIAyDATLFIQASIDEVVKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTL 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 925 IGLLMLIGIVVTNAIVLVDLVNQYRRDG-MPLDEAIRsGARRRLRPIL-MTAA-ATIFALLPMALGITG--YSAFISKPL 999
Cdd:PRK09579 389 LAMVLAIGLVVDDAIVVVENIHRHIEEGkSPFDAALE-GAREIAMPVVsMTITlAAVYAPIGFLTGLTGalFKEFALTLA 467
|
170
....*....|
gi 960339101 1000 AVVVIGGLVS 1009
Cdd:PRK09579 468 GAVIISGIVA 477
|
|
| SecD_SecF |
pfam02355 |
Protein export membrane protein; This family consists of various prokaryotic SecD and SecF ... |
353-501 |
1.29e-06 |
|
Protein export membrane protein; This family consists of various prokaryotic SecD and SecF protein export membrane proteins. This SecD and SecF proteins are part of the multimeric protein export complex comprising SecA, D, E, F, G, Y, and YajC. SecD and SecF are required to maintain a proton motive force.
Pssm-ID: 280510 [Multi-domain] Cd Length: 189 Bit Score: 50.30 E-value: 1.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 353 LATEGLLGLGFAIVVILLFLlSVRSTLVTAISIPLS----VLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSIVVIEN 428
Cdd:pfam02355 29 LARKAVLALLFALLLILIYV-GLRFEWRFALGAIIAlahdVIITVGVFSLFGIEVDLATVAALLTIIGYSVNDTVVVFDR 107
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 960339101 429 IKRHLTYgEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFSLTVAIAML----SSLFVSLTIV 501
Cdd:pfam02355 108 VRENLRK-KTRATLNEIMNLSINQTLTRTINTSLTTLLVVVALFVFGGGSLKDFSLALLVGVIvgtySSIFIASPIL 183
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
1133-1253 |
1.35e-06 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 52.26 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1133 RDVVMSGRDAMPGGGAVSGRDAASGRDAGSGRHAVPGRRAAMGAAVHASSGTATAGSANTSIRSANTSVRPANSSMGSAT 1212
Cdd:PTZ00436 183 KDRERARREDAAAAAAAKQKAAAKKAAAPSGKKSAKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAA 262
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 960339101 1213 APMRSATAPMRSATAPMRSATAPGHSANYAARPVNGPVRSA 1253
Cdd:PTZ00436 263 PPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAA 303
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
1030-1255 |
2.07e-06 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 51.49 E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1030 EKRRLRREAEQAERDRRATRERHEQAGASfvarpgnATARPGNATKRPVNVTGRPASAftdfAATSARGTATGQGGVAVQ 1109
Cdd:PTZ00436 168 QHRHKARKQELRKREKDRERARREDAAAA-------AAAKQKAAAKKAAAPSGKKSAK----AAAPAKAAAAPAKAAAPP 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1110 SGAtgrGGASSRNAVTGRHAAlsrdvvmsgrdAMPGGGAVSGRDAAsgrdagsgrhAVPGRRAAMGAAVHASSGTATAGS 1189
Cdd:PTZ00436 237 AKA---AAAPAKAAAAPAKAA-----------APPAKAAAPPAKAA----------APPAKAAAPPAKAAAPPAKAAAPP 292
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 960339101 1190 ANTSIRSANTSVRPANssmgSATAPMRSATAPMRSATAPMRSATAPGHSANYAARPVNGPVRSAKG 1255
Cdd:PTZ00436 293 AKAAAAPAKAAAAPAK----AAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAAAAPVGKKAG 354
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
1138-1265 |
1.05e-05 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 49.18 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1138 SGRDAMPGGGAVSGRDAASgrdAGSGRHAVPGRRA---AMGAAVHASSGTATAGSANTSIRSANTSVRPANSSMGSATAP 1214
Cdd:PTZ00436 216 SAKAAAPAKAAAAPAKAAA---PPAKAAAAPAKAAaapAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAPP 292
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 960339101 1215 MRSATAPMRSATAPMRSATAPGHSANYAARPVNGPVRS----AKGQVPRSRGARA 1265
Cdd:PTZ00436 293 AKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAatppAKAAAPPAKAAAA 347
|
|
| secD |
TIGR01129 |
protein-export membrane protein SecD; Members of this family are highly variable in length ... |
347-504 |
1.17e-05 |
|
protein-export membrane protein SecD; Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273456 [Multi-domain] Cd Length: 397 Bit Score: 49.21 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 347 RQSIDSLATEGLLGLgfaIVVILLFLLSVR-STLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSIVV 425
Cdd:TIGR01129 244 ADSIEAGIKAGLIGL---VLVLVFMILYYRlFGLIAAIALVINIVLILAILSAFGATLTLPGIAGLILTIGMAVDANVLI 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 426 IENIKRHLTYGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVV-TGmageLFRPFSLTVAIAMLSSLFVSLTIVPVL 504
Cdd:TIGR01129 321 YERIKEELRLGKSVRQAIEAGFERAFSTIFDANITTLIAALILYVFgTG----PVKGFAVTLAIGIIASLFTALVFTRLL 396
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1042-1284 |
4.23e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 4.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1042 ERDRRATRERHEQAGASFVARPGNATARPGNATKRPvnvtgRPASAFTDFAATSARGTATGQGGVAVQSGATGRGGASSR 1121
Cdd:PHA03307 196 STPPAAASPRPPRRSSPISASASSPAPAPGRSAADD-----AGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIW 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1122 NAVTGRHaalsrdvvmSGRDAMPGG--GAVSGRDAASGRDAGSGRHAVPGRRAamgaaVHASSGTATAGSANTSIRSAnt 1199
Cdd:PHA03307 271 EASGWNG---------PSSRPGPASssSSPRERSPSPSPSSPGSGPAPSSPRA-----SSSSSSSRESSSSSTSSSSE-- 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1200 SVRPANSSMGSATAPMRSATAPMRSATAPMRSATAPGHSA--NYAARPVNGPVRSAKGQVPRSRGARAANAVLETVRRRG 1277
Cdd:PHA03307 335 SSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRApsSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRP 414
|
....*..
gi 960339101 1278 KELKERG 1284
Cdd:PHA03307 415 SPLDAGA 421
|
|
| SecF |
COG0341 |
Preprotein translocase subunit SecF [Intracellular trafficking, secretion, and vesicular ... |
273-507 |
5.10e-05 |
|
Preprotein translocase subunit SecF [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440110 [Multi-domain] Cd Length: 291 Bit Score: 46.58 E-value: 5.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 273 VQLSSVASVEHVEKDATSIS------RTNGRESLVLVVTAEANGNVVDVSKEVSQKLDDLLPtvggnahsDVVFDQAPFI 346
Cdd:COG0341 52 VSFEQPVDLEEVREALEEAGlgdasvQTFGSDNDVLIRTPPLDGESAEEVEKVRAALKEAFG--------DVEIVRVEFV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 347 RQSI-DSLATEGLLGLGFAIVVILLFlLSVRSTLVTAISIPLS----VLMAfLGML-VFGYTLNMLTLAA-LTIsIGRVV 419
Cdd:COG0341 124 GPTVgKELTRKALLALLVALIGILIY-IAFRFEWRFAVGAVVAllhdVLIT-LGIFsLFGLEFDLTFIAAlLTI-IGYSL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 420 DDSIVV---I-ENIKRH--LTYGEpkmqavvaavkeVAGAVTSSTLA-----TVIVFLPIAVVTGMAGELFRPFSLT--- 485
Cdd:COG0341 201 NDTVVVfdrIrENLRKYrkMTLAE------------IINLSINQTLSrtintSLTTLLVVLALLFFGGETLRDFALAlli 268
|
250 260
....*....|....*....|...
gi 960339101 486 -VAIAMLSSLFVSltiVPVLAFW 507
Cdd:COG0341 269 gIIVGTYSSIFIA---SPLLLWL 288
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
274-688 |
1.46e-04 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 46.30 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 274 QLSSVASVEHV-----EKDATSISRtNGRESLVLV-VTAEANGNVVDVSKEVSQKLDDLLPT-----VGGNAhsdvvFDQ 342
Cdd:COG2409 87 RLRADPGVAGVqdpwdDPAAGLVSE-DGKAALVTVtLDGDAGDEAAEAVDALRDAVAAAPAPgltvyVTGPA-----ALA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 343 APFIRQSIDSLATEGLLGLGFAIVVILLFLLSVRSTLVTAISIPLSVLMAFLGMLVFGY--TLNMLTLAALT-ISIGRVV 419
Cdd:COG2409 161 ADLNEAFEEDLGRAELITLPVALVVLLLVFRSLVAALLPLLTAGLAVGVALGLLALLAAftDVSSFAPNLLTmLGLGVGI 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 420 DDSIVVI----ENIKRHLTYGEpkmqavvaavkevAGAVTSSTLATVIVFLPIAVVTGMAG------ELFRPFSLTVAIA 489
Cdd:COG2409 241 DYALFLVsryrEELRAGEDREE-------------AVARAVATAGRAVLFSGLTVAIALLGlllaglPFLRSMGPAAAIG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 490 MLSSLFVSLTIVP-VLAFWFLKGNYGKDPREtaairdRAEQREERSILHRLYSPVLRvtqaHRIVTILVSIAIVVGTGFL 568
Cdd:COG2409 308 VAVAVLAALTLLPaLLALLGRRVFWPRRPRR------RRAAAPESGFWRRLARAVVR----RPVPVLVAAVAVLLALALP 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 569 FPLMTLNFLGDS----------GQNLAS--FSQTLPNGTSL---------KESSEKAAEAEKALLGIDGVTTVQttigAG 627
Cdd:COG2409 378 ALGLRLGLPDADslpadspsrqGYDALAehFPPGSNGPLTVvvesdddldPADLAALDALAAALAAVPGVASVQ----PP 453
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 960339101 628 QFSTGGQPNEITYAITTKDDA-DQEALR--HRIDDTLKSLPDHGDISMqasggpGGASTVNIDI 688
Cdd:COG2409 454 TRPEGTDGDAARLQVVPDGDPdSPEAIDlvDRLRDAAAPALEGAEVLV------GGTTAVNIDI 511
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1027-1257 |
2.20e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.93 E-value: 2.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1027 GPGEKRRLRREAEQAERDRRATRERHEQAGASFVARPGNATARPG------NATKRP----VNVTGRPASAFTDFAATSA 1096
Cdd:PHA03307 202 ASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGcgwgpeNECPLPrpapITLPTRIWEASGWNGPSSR 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1097 RGTATGQGGVAVQSGATGRGGASSRNAVTGRHAALSRDVVMSGRDAMPGGGAVSGRDAASGRDAGSGRHAVPGR-RAAMG 1175
Cdd:PHA03307 282 PGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRpPPPAD 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1176 AAVHASSGTATAGSANTSIRSANTSVRPANSSMGSAtAPMRSATAPmrsATAPMRSATAPGHSANYAARPVNGPVRSAKG 1255
Cdd:PHA03307 362 PSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGR-ARRRDATGR---FPAGRPRPSPLDAGAASGAFYARYPLLTPSG 437
|
..
gi 960339101 1256 QV 1257
Cdd:PHA03307 438 EP 439
|
|
| recX |
PRK14136 |
recombination regulator RecX; Provisional |
1031-1213 |
2.99e-04 |
|
recombination regulator RecX; Provisional
Pssm-ID: 237620 [Multi-domain] Cd Length: 309 Bit Score: 44.61 E-value: 2.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1031 KRRLRREAEQAERDRRATR--ERHEQAGA-SFVARPGNATARPGNATKRPVNVTGRPASAFTDF-------AATSARGTA 1100
Cdd:PRK14136 3 RRRQGADPQEADHPARAARagRPHASRETdRTVSGEGRPAGRTATRASDDALVSFEIAAPDEPFdddesfdAHDRARRRV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1101 TGQGGVAVQSGATGRGGASSRNAVTGRHAAlsrdvvmsgrdamPGGGAVSGRdaasgrdagSGRHAVPGRRAAmGAAVHA 1180
Cdd:PRK14136 83 SGVGVRDAGAPGGRAADARAANLSSAAKRA-------------EAAGDVYTR---------TSQHPRRTRRAA-GPFHSD 139
|
170 180 190
....*....|....*....|....*....|...
gi 960339101 1181 SSGTATAGSANTSIRSAntSVRPANSSMGSATA 1213
Cdd:PRK14136 140 SSPSASSEDDGAARSRA--SSRPARSLKGRALG 170
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
863-982 |
3.64e-04 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 44.84 E-value: 3.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 863 SQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLV 942
Cdd:COG4258 635 GRYRNDALWLLLLALLLILLLLLLRLRSLRRALRVLLPPLLAVLLTLAILGLLGIPLNLFHLIALLLVLGIGIDYALFFT 714
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 960339101 943 DLVNQyrrdgmpldeaiRSGARRRLRPILMTAAATI--FALL 982
Cdd:COG4258 715 EGLLD------------KGELARTLLSILLAALTTLlgFGLL 744
|
|
| PRK13875 |
PRK13875 |
conjugal transfer protein TrbL; Provisional |
1093-1274 |
3.71e-04 |
|
conjugal transfer protein TrbL; Provisional
Pssm-ID: 237537 Cd Length: 440 Bit Score: 44.51 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1093 ATSARGTATGQGGVAVqSGATGRGGAssrnavtgrhaalsrdvvMSGRDAMPGGGAVSGRDAASGrdAGSGRHAvpgrrA 1172
Cdd:PRK13875 271 AGAAVGTGLAAGGAAV-AAAAGAGLA------------------AGGGAAAAGGAAAAARGGAAA--AGGASSA-----Y 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1173 AMGAAVHASSGTATAGSANTSIRSANTSVRPANSSMGSATAPMRSATAPMRSATApmrSATAPGHSANYAARPVNGPVRS 1252
Cdd:PRK13875 325 SAGAAGGSGAAGVAAGLGGVARAGASAAASPLRRAASRAAESMKSSFRAGARSTG---GGAGGAAAAAAAGAAAAGPPAW 401
|
170 180
....*....|....*....|..
gi 960339101 1253 AKGQVPRSRGARAANAVLETVR 1274
Cdd:PRK13875 402 AKRMKRRQQLTHGATTAAHALR 423
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1123-1282 |
4.41e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.59 E-value: 4.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1123 AVTGRHAALSRDVVMSGRDAMPGGGAVSGRDAASGRDAGSGRHAVPGRRAAMGAAVHASSGTATAGSANTSiRSANTSVR 1202
Cdd:PRK07764 373 GLLARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS-PAGNAPAG 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1203 PANSSMGSATAPMRSATAPmrsaTAPMRSATAPGHSANYAARPVNGPvrsakgQVPRSRGARAANAVLETVRRRGKELKE 1282
Cdd:PRK07764 452 GAPSPPPAAAPSAQPAPAP----AAAPEPTAAPAPAPPAAPAPAAAP------AAPAAPAAPAGADDAATLRERWPEILA 521
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
358-566 |
5.37e-04 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 44.44 E-value: 5.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 358 LLGLGFAIVVILLFLL--SVRSTLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSIVVIENIKRHLTY 435
Cdd:TIGR00921 198 TMAISGILVVLVLLLDfkRWWRPLLPLVIILFGVAWVLGIMGWLGIPLYATTLLAVPMLIGVGIDYGIQTLNRYEEERDI 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 436 GEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAV-VTGMAGELFRPFSLTVAIAMLSSLFVsltiVPVLAFWFLKGNYG 514
Cdd:TIGR00921 278 GRAKGEAIVTAVRRTGRAVLIALLTTSAGFAALALsEFPMVSEFGLGLVAGLITAYLLTLLV----LPALLQSIDIGREK 353
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 960339101 515 KDpretaaiRDRAEQREERSILHRLYSPVLRVTQAHRiVTILVSIAIVVGTG 566
Cdd:TIGR00921 354 VK-------KEIIAIGGKSSEIEEELSKVLSITVRHP-VPALVAALIITGLG 397
|
|
| TrbL |
COG3846 |
Type IV secretory pathway, TrbL components [Intracellular trafficking, secretion, and ... |
1092-1240 |
9.57e-04 |
|
Type IV secretory pathway, TrbL components [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 443056 [Multi-domain] Cd Length: 443 Bit Score: 43.39 E-value: 9.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1092 AATSARGTATGQGGVAVQSGATGRGGASSrnAVTGRHAALSrdvvmSGRDAMPGGGAVSGRDAASGRDAGSGRhAVPGRR 1171
Cdd:COG3846 292 AAAAAGGAAAAGGAAAARGGASAAGGAKA--AYSLGSAGSG-----SGAAGVAAGMGGVGRAGGSAAASPAGK-AAFAQA 363
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 960339101 1172 AAMGAAVHASSGTATAGSANTSIRSA-NTSVRPANSSMGSATAPMR---SATAPMRSATAPMRSATAPGHSAN 1240
Cdd:COG3846 364 AGFADSYRAGSRAAWAATGGAAARGAgLTASAPAKGGAPAWARRMKrrqAATHGATLAAHALRSGDSGGSGAS 436
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
358-502 |
1.20e-03 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 43.30 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 358 LLGLGFAIVVILL--FLLSVRSTLVTAISIPLSVLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSIVVIENIKRHLTy 435
Cdd:COG4258 644 LLLLALLLILLLLllRLRSLRRALRVLLPPLLAVLLTLAILGLLGIPLNLFHLIALLLVLGIGIDYALFFTEGLLDKGE- 722
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 960339101 436 gepkmqavvaavkevagavTSSTLATVIVflpiAVVTGMAGelF-----------RPFSLTVAIAMLSSLFVSLTIVP 502
Cdd:COG4258 723 -------------------LARTLLSILL----AALTTLLG--FgllafsstpalRSFGLTVLLGILLALLLAPLLAP 775
|
|
| PRK14726 |
PRK14726 |
protein translocase subunit SecDF; |
746-981 |
1.81e-03 |
|
protein translocase subunit SecDF;
Pssm-ID: 237805 [Multi-domain] Cd Length: 855 Bit Score: 42.78 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 746 AIVgLVAQELNPSSIGKVSLDGTdtdIYVAGDTKPVTLNDLTKLSIAGVPLTDLATIEERNVVPELstkntqatvtialt 825
Cdd:PRK14726 305 AIV-LDGQVISAPVIDEAITGGE---GRISGNFSEQGANDLAVLLRAGALPATLTVVEERTVGPGL-------------- 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 826 pagqdvgavmkvAQDSIDAvklpdGARASVGGAADDISQTFGQIGIAILAAILLVYVLLVWIFkslvqplillvsipfaa 905
Cdd:PRK14726 367 ------------GADSIAA-----GLVAGLIAAILVAALMIGFYGFLGVIAVIALIVNVVLII----------------- 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 906 tgafGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPIL------MTAAATIF 979
Cdd:PRK14726 413 ----AVLSLLGATLTLPGIAGIVLTIGMAVDSNVLIYERIREEEKTGHSLIQALDRGFSRALATIVdanvtiLIAAVILF 488
|
..
gi 960339101 980 AL 981
Cdd:PRK14726 489 FL 490
|
|
| PRK13875 |
PRK13875 |
conjugal transfer protein TrbL; Provisional |
1092-1248 |
1.92e-03 |
|
conjugal transfer protein TrbL; Provisional
Pssm-ID: 237537 Cd Length: 440 Bit Score: 42.20 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1092 AATSARGTATGQGGVAVQSGATGRGGASsrnavtgrhaalsrdvvmsgrdaMPGGGAVSGRDAASGRDAGSGRHAVPGRR 1171
Cdd:PRK13875 288 AAAGAGLAAGGGAAAAGGAAAAARGGAA-----------------------AAGGASSAYSAGAAGGSGAAGVAAGLGGV 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 1172 AAMGAAVHASSGTATAGSANTSIRSANTSvrPANSSMGSATAPMRSATAPMRSATAP-----MRSATAPGHSANYAARPV 1246
Cdd:PRK13875 345 ARAGASAAASPLRRAASRAAESMKSSFRA--GARSTGGGAGGAAAAAAAGAAAAGPPawakrMKRRQQLTHGATTAAHAL 422
|
..
gi 960339101 1247 NG 1248
Cdd:PRK13875 423 RS 424
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
351-532 |
1.93e-03 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 42.53 E-value: 1.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 351 DSLATEGLLGLGFAIVVILLFLLsVRSTLVTAISIPLS----VLMAFLGMLVFGYTLNMLTLAA-LTIsIGRVVDDSIVV 425
Cdd:PRK13024 573 KELARNAIIAVLIALIGILLYIL-IRFEWTFSLGAILAllhdVLIVIGFFSLFRLEVDLTFIAAiLTI-IGYSINDTVVV 650
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 426 IENIK--RHLTYGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVvtgMAGELFRPFSLT----VAIAMLSSLFVSlt 499
Cdd:PRK13024 651 FDRIRenLRLYKKKDLREIVNKSINQTLSRTINTSLTTLLVLLALLI---FGGSSLRNFSLAllvgLIVGTYSSIFIA-- 725
|
170 180 190
....*....|....*....|....*....|...
gi 960339101 500 iVPVLAFWflKGNYGKDPRETAAIRDRAEQREE 532
Cdd:PRK13024 726 -APLWLDL--EKRRLKKKKKRKKVKKWEVEKIE 755
|
|
| 3a0501s07 |
TIGR00966 |
protein-export membrane protein SecF; This bacterial protein is always found with the ... |
353-497 |
2.29e-03 |
|
protein-export membrane protein SecF; This bacterial protein is always found with the homologous protein-export membrane protein SecD. In numerous lineages, this protein occurs as a SecDF fusion protein. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273368 [Multi-domain] Cd Length: 246 Bit Score: 41.10 E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 353 LATEGLLGLGFAIVVILLFLlSVRSTLVTAISIPLS----VLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSIVVI-- 426
Cdd:TIGR00966 96 LARKAVLALLAALVLILIYI-TVRFEWRFALGAIVAlvhdVIITVGVYSLFGIEVNLTTVAALLTIIGYSINDTVVVFdr 174
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 960339101 427 --ENIKRHltygePKMQAVVAAVKEVAGAVTSSTLATVIVFLPIAVVTGMAGELFRPFSLTVAIAML----SSLFVS 497
Cdd:TIGR00966 175 irENLRKY-----TRKTFTEVINLSINQTLSRTINTSLTTLLAVLALYVFGGGVIKDFSLALLVGVIvgtySSIFIA 246
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
359-986 |
2.54e-03 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 42.29 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 359 LGLGFAIVVILLfLLSVRS-TLVTAISIPLSVLMAF---LGMLVFGyTLNMLTLAALTISIGRVVDDSIVVIENIKRHLT 434
Cdd:TIGR03480 275 GLLSFVLVLVLL-WLALRSpRLVFAVLVTLIVGLILtaaFATLAVG-HLNLISVAFAVLFIGLGVDFAIQFSLRYREERF 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 435 YGEPKMQAVVAAVKEVAGAVTSSTLATVIVFLPIaVVTGMAG--ELfrpfSLTVAIAMLSSLFVSLTIVPvlafwflkgn 512
Cdd:TIGR03480 353 RGGNHREALSVAARRMGAALLLAALATAAGFFAF-LPTDYKGvsEL----GIIAGTGMFIALFVTLTVLP---------- 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 513 ygkdpretAAIRDRAEQREERSILHRLYSPVLRVTQAHRIVTILVSIAIVVGTGFLFPLMTLNF---------------- 576
Cdd:TIGR03480 418 --------ALLRLLRPPRRRKPPGYATLAPLDAFLRRHRRPVLGVTLILGIAALALLPQLRFDFnplnlqdpktesvrtf 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 577 --LGDSGQNLASFSQTLpngTSLKESSEKAAEAEKALLGIDGVTTVQT-----------TIGAGQFSTGGQPNEITYAIT 643
Cdd:TIGR03480 490 leLLADPDTSPYSAEVL---APSAPEARALTERLEALPEVDQVVTLPDfvpddqeaklaLIADLALVLGPTLNPGEADPA 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 644 TKDDADQEALRhRIDDTLKSLPDHGDismqasgGPGGAStvniditgptatARRDANDLimDQLANPPASVSQVTSDLta 723
Cdd:TIGR03480 567 PSAEEVAAALR-RLAARLRAAAAKSQ-------DPDAAA------------AGRLAASL--DRLLAKAPAQAATLRAL-- 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 724 dqpavvisvksKEAAARGLTESaiVGLVAQELNPSSIGKVSLDGTDTDIYVAGDTKpvtlndltklsiagvpltdlATIE 803
Cdd:TIGR03480 623 -----------QGALLAGLPGE--LDRLRDSLQAEPVTLEDLPPDLRRRWVAKDGR--------------------ARLE 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 804 ernVVPELSTKNTQATVTIaltpagqdVGAVMKVAQDSIdavklpdGARASVGGAADDISQTFGQIGIAILAAILlvyVL 883
Cdd:TIGR03480 670 ---VFPKEDLNDNEALRRF--------VRAVRKVAPDAT-------GAPVSILESGDTVVGAFLQAFIYALVAIT---VL 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 884 LVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLVDLVNQYRRDGMPLDEairSGA 963
Cdd:TIGR03480 729 LLLTLRRVRDVLLVLAPLLLAGLLTVAAMVLLGIPFNFANIIALPLLLGLGVDFGIYMVHRWRNGVDSGNLLQS---STA 805
|
650 660
....*....|....*....|...
gi 960339101 964 rrrlRPILMTAAATIFALLPMAL 986
Cdd:TIGR03480 806 ----RAVFFSALTTATAFGSLAV 824
|
|
| secD |
TIGR01129 |
protein-export membrane protein SecD; Members of this family are highly variable in length ... |
859-1010 |
3.76e-03 |
|
protein-export membrane protein SecD; Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273456 [Multi-domain] Cd Length: 397 Bit Score: 41.12 E-value: 3.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 859 ADDISQTF--GQIGIAILAAILLVYVLLVWIFKSLVqpliLLVSIpFAATGAFGLLVLTntpLGLPSMIGLLMLIGIVVT 936
Cdd:TIGR01129 244 ADSIEAGIkaGLIGLVLVLVFMILYYRLFGLIAAIA----LVINI-VLILAILSAFGAT---LTLPGIAGLILTIGMAVD 315
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 960339101 937 NAIVLVDLVNQYRRDGMPLDEAIRSGARRRLRPILMTAAATIFALLpmALGITGYSAFisKPLAVVVIGGLVSS 1010
Cdd:TIGR01129 316 ANVLIYERIKEELRLGKSVRQAIEAGFERAFSTIFDANITTLIAAL--ILYVFGTGPV--KGFAVTLAIGIIAS 385
|
|
| PRK08578 |
PRK08578 |
preprotein translocase subunit SecF; Reviewed |
863-1009 |
4.26e-03 |
|
preprotein translocase subunit SecF; Reviewed
Pssm-ID: 236302 [Multi-domain] Cd Length: 292 Bit Score: 40.68 E-value: 4.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 863 SQTFGQIGIAILAAILLVYVLLVWIFKSLVQPLILLVS------IPFAATGAFGLlvltntPLGLPSMIGLLMLIGIVVT 936
Cdd:PRK08578 130 SQFQEQALKAVGFAFIGMAVVVFLIFRTPVPSLAVILSafsdiiIALALMNLFGI------ELSLATVAALLMLIGYSVD 203
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 960339101 937 NAIVLVDLVnqYRRDGmPLDEAI----RSGarrrlrpILMTaAATIFALLPMALGITGYSAFISKPLAVVVIGGLVS 1009
Cdd:PRK08578 204 SDILLTTRV--LKRRG-TFDESIkramRTG-------ITMT-LTTIAAMAVLYIVSTIPQAEVLANIAAVLIFGLLA 269
|
|
| SecD_SecF |
pfam02355 |
Protein export membrane protein; This family consists of various prokaryotic SecD and SecF ... |
863-1010 |
4.63e-03 |
|
Protein export membrane protein; This family consists of various prokaryotic SecD and SecF protein export membrane proteins. This SecD and SecF proteins are part of the multimeric protein export complex comprising SecA, D, E, F, G, Y, and YajC. SecD and SecF are required to maintain a proton motive force.
Pssm-ID: 280510 [Multi-domain] Cd Length: 189 Bit Score: 39.90 E-value: 4.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 863 SQTFGQIGIAILAAILLVYVLLVWIFKSLVqPLILLVSIPFAATGAFGLLVLTNTPLGLPSMIGLLMLIGIVVTNAIVLV 942
Cdd:pfam02355 27 SELARKAVLALLFALLLILIYVGLRFEWRF-ALGAIIALAHDVIITVGVFSLFGIEVDLATVAALLTIIGYSVNDTVVVF 105
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 943 DLVNQYRRD--GMPLDEAIRSGARRRLRPILMTAAATIFALLPMALGITGYSAFISKPLAVVVIGGLVSS 1010
Cdd:pfam02355 106 DRVRENLRKktRATLNEIMNLSINQTLTRTINTSLTTLLVVVALFVFGGGSLKDFSLALLVGVIVGTYSS 175
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
844-986 |
5.41e-03 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 40.99 E-value: 5.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 844 AVKLPDGARASVGGA---ADDISQTF-GQIGIAILAAILLVYVLLVWIFKSLVQPLILLVSIPFAATGAFGLLVLTNtpl 919
Cdd:COG4258 222 LNAAFPGAQLLLTGAglfAVAAAQQIkHDISTIGLISLLGILLLLLLVFRSLRPLLLGLLPVAVGALAGLAAVSLVF--- 298
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 920 GLPSMIGLLM---LIGIVVTNAIvlvDLVNQYRRDGmplDEAIRSGARRRLRPILMTAAATIFALLPMAL 986
Cdd:COG4258 299 GSVHGITLGFgssLIGVAVDYSL---HYLTHRRAAG---EWDPRAALRRIWPTLLLGLLTTVLGYLALLF 362
|
|
| PRK08578 |
PRK08578 |
preprotein translocase subunit SecF; Reviewed |
277-423 |
6.73e-03 |
|
preprotein translocase subunit SecF; Reviewed
Pssm-ID: 236302 [Multi-domain] Cd Length: 292 Bit Score: 39.91 E-value: 6.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 277 SVASVEHVEKDATSISRTNGRESLVLVVTAEANGNVVDVSKEVSQKLDDLLPTVGGNAHSDVVFDQAPFIRQSIDSLA-- 354
Cdd:PRK08578 52 TEITIQTNDASPDELESALSGEPGVDVRKGSGNGYIITFGSGDDTDVDKLADAVKEFFNVDSISELNYSEKQIGPTFGsq 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 960339101 355 --TEGLLGLGFA-----IVVILLFllsvrSTLVTAISIPLS----VLMAFLGMLVFGYTLNMLTLAALTISIGRVVDDSI 423
Cdd:PRK08578 132 fqEQALKAVGFAfigmaVVVFLIF-----RTPVPSLAVILSafsdIIIALALMNLFGIELSLATVAALLMLIGYSVDSDI 206
|
|
| |
