|
Name |
Accession |
Description |
Interval |
E-value |
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
8-267 |
4.99e-88 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 263.55 E-value: 4.99e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 8 LTIIYAWLMLFCVLPLTLVLLASFLSSNNNQLVSLPFTLANYSALLS-PVFLKIFVRSLVIALLTTLSCLILAYPFSYLL 86
Cdd:COG1176 15 LLPALLWLLLFFVLPLLLLLVYSFTTRDPYGGVVPGFTLENYARLFTdPLYLKVLLRTLWIALLTTLICLLLGYPIAYFL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 87 VKS--KQQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHVIDAPLSLLYSNFAVITGLIYNLLPFMVLPIF 164
Cdd:COG1176 95 ARAppRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLALGLIDEPLRLLYTEFAVVIGLVYVYLPFMVLPLY 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 165 TNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQDQFLVLANW 244
Cdd:COG1176 175 AALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKVLMIGNLIYQQFLSALNW 254
|
250 260
....*....|....*....|...
gi 966427224 245 PQGSATSIILTALLLLLLFIFRR 267
Cdd:COG1176 255 PLAAALAVVLLLIVLLVLLLYLR 277
|
|
| potB |
PRK09497 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
4-270 |
1.67e-79 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 181910 Cd Length: 285 Bit Score: 241.52 E-value: 1.67e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 4 KSISLTIIYAWLMLFCVLPLTLVLLASFLSSNNNQLVSLPFTLANYSALLSPVFLKIFVRSLVIALLTTLSCLILAYPFS 83
Cdd:PRK09497 8 QNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDANFVKMVFTLDNYTRLLDPLYAEVLLHSLNMALIATLACLVLGYPFA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 84 YLLVK--SKQQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHVIDAPLSLLYSNFAVITGLIYNLLPFMVL 161
Cdd:PRK09497 88 WFLAKlpHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTESAVIIGLVYILLPFMVL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 162 PIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQDQFLVL 241
Cdd:PRK09497 168 PLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFYVSDLLGGAKNLLIGNVIKSQFLNI 247
|
250 260
....*....|....*....|....*....
gi 966427224 242 ANWPQGSATSIILTALLLLLLFIFRRQNK 270
Cdd:PRK09497 248 RDWPFGAATSITLTIVMGLMLLVYYRASK 276
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
8-254 |
1.44e-19 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 87.81 E-value: 1.44e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 8 LTIIYAWLMLFCVLPLTLVLLASFLSSNNNQLvslpfTLANYSALL-SPVFLKIFVRSLVIALLTTLSCLILAYPFSYLL 86
Cdd:TIGR03262 7 LAGMILALLLFLLLPLLALLTKSVYDSDGDFI-----GLANFAEYFaTPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 87 VKS--KQQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHVidaplsllYSNFAVITGLIYNLLPFMVLPIF 164
Cdd:TIGR03262 82 TRSriPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSI--------YGFWGIVIGEVFYTFPHALMILV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 165 TNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQdQFLVLANW 244
Cdd:TIGR03262 154 TALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDYNVLATDIYK-QVIGQQNF 232
|
250
....*....|
gi 966427224 245 PQGSATSIIL 254
Cdd:TIGR03262 233 PMGAVVGVLL 242
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
61-254 |
1.30e-05 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 44.96 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 61 FVRSLVIALLTTLSCLILAYPFSYLLVKSKqqsllilliiipFWTSSLVRTY-SLIAILKAKGVINSILLKFHVIDAPLS 139
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKR------------GKLDRLLRRIiDLLLSLPSLVLGLLLVLLFGVLLGWGI 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 140 LLYSNFAVITGLIYNLLPFMVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIP 219
Cdd:cd06261 69 LPGLGLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALV 148
|
170 180 190
....*....|....*....|....*....|....*
gi 966427224 220 NVLGGARSILLGNLIQDQFLVLANWPQGSATSIIL 254
Cdd:cd06261 149 SFLGGGEAPGPGTGLLLIFAILFPGDLGVAAAVAL 183
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
8-267 |
4.99e-88 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 263.55 E-value: 4.99e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 8 LTIIYAWLMLFCVLPLTLVLLASFLSSNNNQLVSLPFTLANYSALLS-PVFLKIFVRSLVIALLTTLSCLILAYPFSYLL 86
Cdd:COG1176 15 LLPALLWLLLFFVLPLLLLLVYSFTTRDPYGGVVPGFTLENYARLFTdPLYLKVLLRTLWIALLTTLICLLLGYPIAYFL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 87 VKS--KQQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHVIDAPLSLLYSNFAVITGLIYNLLPFMVLPIF 164
Cdd:COG1176 95 ARAppRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLALGLIDEPLRLLYTEFAVVIGLVYVYLPFMVLPLY 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 165 TNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQDQFLVLANW 244
Cdd:COG1176 175 AALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKVLMIGNLIYQQFLSALNW 254
|
250 260
....*....|....*....|...
gi 966427224 245 PQGSATSIILTALLLLLLFIFRR 267
Cdd:COG1176 255 PLAAALAVVLLLIVLLVLLLYLR 277
|
|
| potB |
PRK09497 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
4-270 |
1.67e-79 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 181910 Cd Length: 285 Bit Score: 241.52 E-value: 1.67e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 4 KSISLTIIYAWLMLFCVLPLTLVLLASFLSSNNNQLVSLPFTLANYSALLSPVFLKIFVRSLVIALLTTLSCLILAYPFS 83
Cdd:PRK09497 8 QNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDANFVKMVFTLDNYTRLLDPLYAEVLLHSLNMALIATLACLVLGYPFA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 84 YLLVK--SKQQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHVIDAPLSLLYSNFAVITGLIYNLLPFMVL 161
Cdd:PRK09497 88 WFLAKlpHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTESAVIIGLVYILLPFMVL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 162 PIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQDQFLVL 241
Cdd:PRK09497 168 PLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFYVSDLLGGAKNLLIGNVIKSQFLNI 247
|
250 260
....*....|....*....|....*....
gi 966427224 242 ANWPQGSATSIILTALLLLLLFIFRRQNK 270
Cdd:PRK09497 248 RDWPFGAATSITLTIVMGLMLLVYYRASK 276
|
|
| PRK10683 |
PRK10683 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
12-271 |
2.55e-51 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182646 Cd Length: 317 Bit Score: 170.66 E-value: 2.55e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 12 YAWLMLFCVLPLTLVLLASF------------LSSNNNQLVSLPFTLANYSALLS-PVFLKIFVRSLVIALLTTLSCLIL 78
Cdd:PRK10683 37 YLWLILLFLLPFLIVFKISLaemaraippytdLMEWADGQLSITLNLGNFLQLTDdPLYFDAYLQSLQVAAISTLCCLLI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 79 AYPFSYLLVKSK--QQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHVIDAPLSLLYSNFAVITGLIYNLL 156
Cdd:PRK10683 117 GYPLAWAVAHSKpsTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 157 PFMVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQD 236
Cdd:PRK10683 197 PFMVLPIYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ 276
|
250 260 270
....*....|....*....|....*....|....*.
gi 966427224 237 QFLVLANWPQGSATSII-LTALLLLLLFIFRRQNKE 271
Cdd:PRK10683 277 EFFNNRDWPVASAVAIImLLLLIVPIMWFHKHQQKS 312
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
1-267 |
5.16e-23 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 94.79 E-value: 5.16e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 1 MRNKSISLTIIYAWLMLFCVLPLTLVLLASFLSSNNNQLVSLPFTLANYSALLS-PVFLKIFVRSLVIALLTTLSCLILA 79
Cdd:COG1177 2 SRLGRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLTFPPEGFTLRWYAELFSdPRLLDALLNSLLIALLSTLLATVLG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 80 YPFSYLLVKSKqqsllilliiipFWTSSLVRTYSLIAILkAKGVIN--SILLKFHVIDAPLSLlysnFAVITGLIYNLLP 157
Cdd:COG1177 82 TPAALALARYR------------FRGRRLLLALLLLPLV-VPGIVLgvALLLLFSALGLSGGL----WGLILAHVVFTLP 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 158 FMVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQDQ 237
Cdd:COG1177 145 FVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSM 224
|
250 260 270
....*....|....*....|....*....|
gi 966427224 238 fLVLANWPQGSATSIILTALLLLLLFIFRR 267
Cdd:COG1177 225 -IRRGISPEINALSTLLILLSLLLLLLAER 253
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
2-224 |
6.14e-20 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 89.06 E-value: 6.14e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 2 RNKSISLTIIYAWLMLFCVLPLTLVLLASFLSSnnnqlvslpftLANYSALLS-PVFLKIFVRSLVIALLTTLSCLILAY 80
Cdd:COG1178 7 RRPRLLLLLLALLLALLVLLPLLALLLRAFTDG-----------LANFWALLSdPYLWRALGNTLLLALLVTLLSLLLGV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 81 PFSYLLVKS--KQQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHVIDAPLslLYSNFAVITGLIYNLLPF 158
Cdd:COG1178 76 PLAWLLARTdfPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALFGLEPPD--IYGLGGIILVLVLFNYPY 153
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966427224 159 MVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGG 224
Cdd:COG1178 154 VYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGG 219
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
8-254 |
1.44e-19 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 87.81 E-value: 1.44e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 8 LTIIYAWLMLFCVLPLTLVLLASFLSSNNNQLvslpfTLANYSALL-SPVFLKIFVRSLVIALLTTLSCLILAYPFSYLL 86
Cdd:TIGR03262 7 LAGMILALLLFLLLPLLALLTKSVYDSDGDFI-----GLANFAEYFaTPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 87 VKS--KQQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHVidaplsllYSNFAVITGLIYNLLPFMVLPIF 164
Cdd:TIGR03262 82 TRSriPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSI--------YGFWGIVIGEVFYTFPHALMILV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 165 TNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQdQFLVLANW 244
Cdd:TIGR03262 154 TALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDYNVLATDIYK-QVIGQQNF 232
|
250
....*....|
gi 966427224 245 PQGSATSIIL 254
Cdd:TIGR03262 233 PMGAVVGVLL 242
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
15-269 |
2.86e-18 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 82.36 E-value: 2.86e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 15 LMLFCVLPLTLVLLASFLSSNNnqlvslpFTLANYSALL-SPVFLKIFVRSLVIALLTTLSCLILAYPFSYLLVkskqqs 93
Cdd:PRK15050 35 LAPLVVYPLVRVVLQSLTGEHG-------LGLATYRAVLgSPDFRGALLTTLQIAFASTAGCLVLGVLLALVLA------ 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 94 llilliIIPFWTSSLVR--------------TYSLIAILKAKGVINSILLK-FHVIDAPLSLLYSNFAVITGLIYNLLPF 158
Cdd:PRK15050 102 ------FVPFPGASLVGrfidtfvafpsfliTLAFTFLYGSAGSVNIALQRlFGLEAPPLDFLYSPGGVILAEITFYTPF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 159 MVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQDQF 238
Cdd:PRK15050 176 VVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFTGAKDVVTLPVLIYSKA 255
|
250 260 270
....*....|....*....|....*....|.
gi 966427224 239 LVLANWPQGSATSIILTALLLLLLFIFRRQN 269
Cdd:PRK15050 256 IVDFDYPTACAIAVVNLALSLGLYALYRRVN 286
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
53-207 |
1.23e-15 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 73.93 E-value: 1.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 53 LSPVFLKIFVRSLVIALLTTLSCLILAYPFSYLLVKSKqqsllilliiipFWTSSLVRT--------------YSLIAIL 118
Cdd:COG4149 1 LSPEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTR------------FRGKGLLEAlvtlplvlpptvlgFYLLLLF 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 119 KAKGVINSILLKFHVIDAPLSllysnF--AVITGLIYNLlPFMVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPN 196
Cdd:COG4149 69 GRNGPLGQLLEELFGISLVFT-----WtgAVLASVVVSL-PLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPL 142
|
170
....*....|.
gi 966427224 197 TASGVIAGCLL 207
Cdd:COG4149 143 AKPGILAGAVL 153
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
6-270 |
3.98e-14 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 71.73 E-value: 3.98e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 6 ISLTIIYAWLMLFCVLPLTLVLLASFLSSNNNQlvslpFTLANYSA-LLSPVFLKIFVRSLVIALLTTLSCLILAYPFSY 84
Cdd:COG1178 289 LALALCLLLVLLGLLLPLLALLLWSLTKALDDN-----LTLDNYRFvLLDPSLLRALLNSLLLALLAALLAVLLALLLAY 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 85 LLVKSKQ--QSLLILLIIIPFWTSSLVrtyslIAIlkakgvinSILLKFHVIdAPLSLLYSNFAVITGLIYNLLPFMVLP 162
Cdd:COG1178 364 LVRRRRGrlARLLDRLAMLPYAVPGIV-----LGL--------GLLLLFNRP-LPLLLYGTLAILVLAYVVRFLPFALRS 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 163 IFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGARSILLGNLIQdQFLVLA 242
Cdd:COG1178 430 LEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLRPPGFETLAVLIY-QLASSG 508
|
250 260
....*....|....*....|....*...
gi 966427224 243 NWPQGSATSIILTALLLLLLFIFRRQNK 270
Cdd:COG1178 509 RYGEAAALALLLVLVSLLPVLLLERLLG 536
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
5-207 |
7.19e-12 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 64.00 E-value: 7.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 5 SISLTIIYAWLMLFCVLPLTLVLLASFLSSnnnqlvslpftLANY-SALLSPVFLKIFVRSLVIALLTTLSCLILAYPFS 83
Cdd:COG0555 10 GLTLGLTLLYLSLIVLLPLAALVLKAAGLG-----------WAEFwAVLTSPRVLAALKLSLGTALIAALINLVFGLPLA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 84 YLLVKS--KQQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHvidapLSLLYSNFAVITGLIYNLLPFMVL 161
Cdd:COG0555 79 WVLVRYrfPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLG-----IKVAFTPLGIVLAQTFVSLPFVVR 153
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 966427224 162 PIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLL 207
Cdd:COG0555 154 TVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFAL 199
|
|
| COG4132 |
COG4132 |
ABC-type uncharacterized transport system, permease component [General function prediction ... |
13-232 |
2.27e-09 |
|
ABC-type uncharacterized transport system, permease component [General function prediction only];
Pssm-ID: 443307 [Multi-domain] Cd Length: 286 Bit Score: 56.74 E-value: 2.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 13 AWLMLFCVLPLTLVLLASFLSSNNNqlvslpFTLANYSALLSPVFLKIFVRSLVIALLTTLSCLILAYPFSYLLVKSKqq 92
Cdd:COG4132 23 LFVLLFLLLPTVWVVIGAFQDDDGG------FTLANYAELTSPFYLQAFWNSIWLSLASALIGAVIGLLLAYALRRGG-- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 93 sllilliiiPFWTSSLVRTYS--------------LIAILKAKGVINSILLKFHVIDAPLSLLYSNFAVITGLIYNLLPF 158
Cdd:COG4132 95 ---------PGWLRRAVLAFSgvasnfagvplafaFIATLGRNGLVTLLLKQLGIDLYDGFNLYSFWGLILVYLYFQIPL 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 966427224 159 MVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPntasgviagcllVLLPSmtlfyipnvLGGARSILLGN 232
Cdd:COG4132 166 MVLLLYPALDGLRREWREAAALLGASRWQYWRRVALP------------VLAPS---------LLGTFLLLFAN 218
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
13-272 |
6.65e-09 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 55.53 E-value: 6.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 13 AWLMLFCVLPLTLVLLASFLSSNnnqLVSLPFT---LANYSALLS-PVFLKIFVRSLVIALLTTLSCLILAYPFSYLLV- 87
Cdd:COG1175 29 LLLLVFVLYPLLYTLYLSFTDWN---LLGPPPEfvgLDNYARLFTdPRFWNALGNTLLFTVVSVPLQLVLGLLLALLLNr 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 88 KSKQQSLLILLIIIPFWTSSLVRTYSLIAIL-KAKGVINSILLKFHVidAPLSLL----YSNFAVITGLIYNLLPFMVLP 162
Cdd:COG1175 106 KLRGRGFFRTLFFLPWVISPVVVALIWKWLFnPDYGLLNALLGALGL--EPINWLgdpsLALPAVIIVTVWKGTGFNMLI 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 163 IFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVLGGA----RSILLGNLIQDQF 238
Cdd:COG1175 184 FLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDLVYVLTGGgpgnSTTTLVLYIYQTA 263
|
250 260 270
....*....|....*....|....*....|....
gi 966427224 239 LVLANWPQGSATSIILTALLLLLLFIFRRQNKEG 272
Cdd:COG1175 264 FQQFDFGYASAIAVVLFLIILVLTLLQLRLLRRR 297
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
4-273 |
1.43e-08 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 54.33 E-value: 1.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 4 KSISLTIIYAWLMLFCVLPLTLVLLASF-----LSSNNNQLVSLPFTLANYSALLSPV-FLKIFVRSLVIALLTTLSCLI 77
Cdd:COG0395 13 GRILLYLLLILLALLFLFPLYWMVVTSFkppaeIFSGPPSLLPSEFTLENYRAAFTDGpFGRYLLNSLIVAVVSTVLSLL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 78 LAYPFSYLLVKSKqqsllilliiipFWTSSLVRTYSLIailkakgvinSILLKFHVIDAPLSLLYSNF-------AVITG 150
Cdd:COG0395 93 LSSLAAYALARFR------------FRGRKLLFLLILA----------TLMIPGQVLLIPLYLLFRQLgllntywGLILP 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 151 LIYNLLPFMVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIPNVL---GGARS 227
Cdd:COG0395 151 YLAFGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILltsPDLRT 230
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 966427224 228 ILLG-NLIQDQFLVlaNWPQGSATSIILTALLLLLLFIFRRQNKEGL 273
Cdd:COG0395 231 LPVGlASFQGQYGT--DWGLLMAAAVIATLPVLILFLFLQRYFVRGL 275
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
156-213 |
1.67e-08 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 53.83 E-value: 1.67e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 966427224 156 LPFMVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSM 213
Cdd:PRK09500 139 LPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSL 196
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
156-228 |
3.24e-07 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 49.92 E-value: 3.24e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966427224 156 LPFMVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSM-----TLFYIPNVLGGARSI 228
Cdd:PRK09421 104 FPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLgefgaTITFVSNIPGETQTI 181
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
61-254 |
1.30e-05 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 44.96 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 61 FVRSLVIALLTTLSCLILAYPFSYLLVKSKqqsllilliiipFWTSSLVRTY-SLIAILKAKGVINSILLKFHVIDAPLS 139
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKR------------GKLDRLLRRIiDLLLSLPSLVLGLLLVLLFGVLLGWGI 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 140 LLYSNFAVITGLIYNLLPFMVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLFYIP 219
Cdd:cd06261 69 LPGLGLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALV 148
|
170 180 190
....*....|....*....|....*....|....*
gi 966427224 220 NVLGGARSILLGNLIQDQFLVLANWPQGSATSIIL 254
Cdd:cd06261 149 SFLGGGEAPGPGTGLLLIFAILFPGDLGVAAAVAL 183
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
1-207 |
3.82e-05 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 43.85 E-value: 3.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 1 MRNKSISLTIIYAWLMLFCVLPLTLVLLAsFLSSNNNQLVSLPFTLAnysalLSPVFLKIFVRSLVIALLTTLSCLILAY 80
Cdd:CHL00187 3 DFNFSLKFSSIYIISLSYIIFLLVLPILA-LLIKASQQPWSDFLQKA-----TEPIALSAYSLTLSMALIAALINGFFGL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 81 PFSYLLVKS--KQQSLLILLIIIPFWTSSLVRTYSLIAILKAKGVINSILLKFHvidapLSLLYSNFAVITGLIYNLLPF 158
Cdd:CHL00187 77 LIAWVLVRYnfPGKRLLDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLLSHLG-----IQIVFTKLGVLLAMIFVSFPF 151
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 966427224 159 MVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLPNTASGVIAGCLL 207
Cdd:CHL00187 152 VVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLAL 200
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
2-195 |
1.07e-04 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 42.83 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 2 RNKSISLTIIYAWLMLFCVLPLTLVLLASFLSSNNNQLVSL---PFTLANYSALLSPV-FLKIFVRSLVIALLTTLSCLI 77
Cdd:COG3833 12 RLKLGLRHLVLIILAIIALFPILWVVSASFNPGGSLYSSSLipeNFTLENYKKLFTETpFLRWFLNSLIVAVVTAIISVF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 78 L----AYPFSYLLVKSKQQSLLILLIIIPFWTsslvrTYSLIAILkakgvinSILLKFHVIDAPLSLLysnfavitgLIY 153
Cdd:COG3833 92 LaalaAYAFSRFRFKGRKAGLLALLLLQMFPA-----FLALVALY-------LLLSALGLLNTLLGLI---------LVY 150
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 966427224 154 --NLLPFMVLPIFTNMERFDFRLIEAARDLGASKWAIFFRVFLP 195
Cdd:COG3833 151 lgGAIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILP 194
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
102-216 |
7.06e-03 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 37.04 E-value: 7.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966427224 102 PFWTSSLVRTYSLIAILKAKGVINSILLKFHVidaplSLLYSNFAVITGLIYNLLPFMVLPIFTNMERFDFRLIEAARDL 181
Cdd:PRK10971 103 PFALPTAVAGLTLASLFSVNGWYGEWLAKFDI-----KVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETL 177
|
90 100 110
....*....|....*....|....*....|....*
gi 966427224 182 GASKWAIFFRVFLPNTASGVIAGCLLVLLPSMTLF 216
Cdd:PRK10971 178 GATRWQSFRKVVLPELSPALLAGVALSFTRSLGEF 212
|
|
|