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Conserved domains on  [gi|1603852650|ref|WP_134355373|]
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hypothetical protein [Flavobacterium psychrophilum]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AccA super family cl43287
Acetyl-CoA carboxylase alpha subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase ...
 158-193 2.56e-03

Acetyl-CoA carboxylase alpha subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase alpha subunit is part of the Pathway/BioSystem: Fatty acid biosynthesis


The actual alignment was detected with superfamily member COG0825:

Pssm-ID: 440587 [Multi-domain]  Cd Length: 315  Bit Score: 37.71  E-value: 2.56e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1603852650 158 ELKIDELKAFAKTNEIDI---------KGLTAKEEIFIALSEWQK 193
Cdd:COG0825    13 EAKIEELRALAEESGVDIseeiarlekKLEKLLKEIYSNLTPWQK 57
 
Name Accession Description Interval E-value
AccA COG0825
Acetyl-CoA carboxylase alpha subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase ...
 158-193 2.56e-03

Acetyl-CoA carboxylase alpha subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase alpha subunit is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440587 [Multi-domain]  Cd Length: 315  Bit Score: 37.71  E-value: 2.56e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1603852650 158 ELKIDELKAFAKTNEIDI---------KGLTAKEEIFIALSEWQK 193
Cdd:COG0825    13 EAKIEELRALAEESGVDIseeiarlekKLEKLLKEIYSNLTPWQK 57
PRK05724 PRK05724
acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
 158-193 3.80e-03

acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated


Pssm-ID: 235580 [Multi-domain]  Cd Length: 319  Bit Score: 37.04  E-value: 3.80e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1603852650 158 ELKIDELKAFAKTNEIDI---------KGLTAKEEIFIALSEWQK 193
Cdd:PRK05724   16 EAKIEELRAVAEDSDVDLseeierlekKLEELTKKIYSNLTPWQK 60
 
Name Accession Description Interval E-value
AccA COG0825
Acetyl-CoA carboxylase alpha subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase ...
 158-193 2.56e-03

Acetyl-CoA carboxylase alpha subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase alpha subunit is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440587 [Multi-domain]  Cd Length: 315  Bit Score: 37.71  E-value: 2.56e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1603852650 158 ELKIDELKAFAKTNEIDI---------KGLTAKEEIFIALSEWQK 193
Cdd:COG0825    13 EAKIEELRALAEESGVDIseeiarlekKLEKLLKEIYSNLTPWQK 57
PRK05724 PRK05724
acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
 158-193 3.80e-03

acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated


Pssm-ID: 235580 [Multi-domain]  Cd Length: 319  Bit Score: 37.04  E-value: 3.80e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1603852650 158 ELKIDELKAFAKTNEIDI---------KGLTAKEEIFIALSEWQK 193
Cdd:PRK05724   16 EAKIEELRAVAEDSDVDLseeierlekKLEELTKKIYSNLTPWQK 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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